]> git.uio.no Git - u/mrichter/AliRoot.git/blobdiff - ITS/AliITSMeanVertexer.cxx
All modifications to track reconstruction removed with the exception of the flag...
[u/mrichter/AliRoot.git] / ITS / AliITSMeanVertexer.cxx
index 69548b9000dd88e845584850261fdba75e5507ec..90701f0a0c73dbcc6cf1d7ab98b4205c459a3411 100644 (file)
@@ -1,9 +1,11 @@
 #include <TFile.h>
+#include <TH1.h>
+#include <TH2.h>
 #include "AliGeomManager.h"
-#include "AliHeader.h"
 #include "AliITSDetTypeRec.h"
 #include "AliITSInitGeometry.h"
 #include "AliITSMeanVertexer.h"
+#include "AliITSRecPointContainer.h"
 #include "AliITSLoader.h"
 #include "AliLog.h"
 #include "AliRawReader.h"
 #include "AliRawReaderRoot.h"
 #include "AliRunLoader.h"
 #include "AliITSVertexer3D.h"
+#include "AliITSVertexer3DTapan.h"
 #include "AliESDVertex.h"
 #include "AliMeanVertex.h"
-#include "AliMultiplicity.h"
-
-const TString AliITSMeanVertexer::fgkMVFileNameDefault = "MeanVertex.root";
-
 
+const Int_t AliITSMeanVertexer::fgkMaxNumOfEvents = 10000;
 ClassImp(AliITSMeanVertexer)
 
 ///////////////////////////////////////////////////////////////////////
@@ -39,265 +39,202 @@ ClassImp(AliITSMeanVertexer)
 /* $Id$ */
 
 //______________________________________________________________________
-AliITSMeanVertexer::AliITSMeanVertexer():TObject(),
-fLoaderFileName(),
-fGeometryFileName(),
-fMVFileName(),
-fRawReader(),
-fRunLoader(),
+AliITSMeanVertexer::AliITSMeanVertexer(Bool_t mode):TObject(),
+fDetTypeRec(NULL),
+fVertexXY(NULL),
+fVertexZ(NULL),
 fNoEventsContr(0),
-fTotTracklets(0.),
-fAverTracklets(0.),
-fSigmaOnAverTracks(0.), 
+fTotContributors(0.),
+fAverContributors(0.), 
 fFilterOnContributors(0),
-fFilterOnTracklets(0),
-fWriteVertices(kFALSE)
+fMode(mode),
+fVertexer(NULL),
+fAccEvents(fgkMaxNumOfEvents), 
+fVertArray("AliESDVertex",fgkMaxNumOfEvents),
+fClu0(NULL),
+fIndex(0),
+fErrXCut(0.),
+fRCut(0.),
+fLowSPD0(0),
+fHighSPD0(0)
 {
   // Default Constructor
-  for(Int_t i=0;i<3;i++){
-    fWeighPos[i] = 0.;
-    fWeighSig[i] = 0.;
-    fAverPos[i] = 0.;
-    for(Int_t j=0; j<3;j++)fAverPosSq[i][j] = 0.;
-  }
-  
-}
-
-//______________________________________________________________________
-AliITSMeanVertexer::AliITSMeanVertexer(TString &filename):TObject(),
-fLoaderFileName(),
-fGeometryFileName(),
-fMVFileName(fgkMVFileNameDefault),
-fRawReader(),
-fRunLoader(),
-fNoEventsContr(0),
-fTotTracklets(0.),
-fAverTracklets(0.),
-fSigmaOnAverTracks(0.), 
-fFilterOnContributors(0),
-fFilterOnTracklets(0),
-fWriteVertices(kTRUE)
-{
-  // Standard constructor
+  Reset();
 
-  for(Int_t i=0;i<3;i++){
-    fWeighPos[i] = 0.;
-    fWeighSig[i] = 0.;
-    fAverPos[i] = 0.;
-    for(Int_t j=0; j<3;j++)fAverPosSq[i][j] = 0.;
-  }
-  SetLoaderFileName();
-  SetGeometryFileName();
-
-  Init(filename);
+  // Histograms initialization
+  const Float_t xLimit = 5.0, yLimit = 5.0, zLimit = 50.0;
+  const Float_t xDelta = 0.02, yDelta = 0.02, zDelta = 0.2;
+  fVertexXY = new TH2F("VertexXY","Vertex Diamond (Y vs X)",
+                      2*(Int_t)(xLimit/xDelta),-xLimit,xLimit,
+                      2*(Int_t)(yLimit/yDelta),-yLimit,yLimit);
+  fVertexXY->SetXTitle("X , cm");
+  fVertexXY->SetYTitle("Y , cm");
+  fVertexXY->SetOption("colz");
+  fVertexZ  = new TH1F("VertexZ"," Longitudinal Vertex Profile",
+                      2*(Int_t)(zLimit/zDelta),-zLimit,zLimit);
+  fVertexZ->SetXTitle("Z , cm");
+  fClu0 = new UInt_t [fgkMaxNumOfEvents];
+  for(Int_t i=0;i<fgkMaxNumOfEvents;i++)fClu0[i]=0;
+  fAccEvents.ResetAllBits(kTRUE);
 }
+
 //______________________________________________________________________
-AliITSMeanVertexer::AliITSMeanVertexer(TString &filename, 
-                                       TString &loaderfilename, 
-                                      TString &geometryfilename):TObject(),
-fLoaderFileName(),
-fGeometryFileName(),
-fMVFileName(fgkMVFileNameDefault),
-fRawReader(),
-fRunLoader(),
-fNoEventsContr(0), 
-fTotTracklets(0.),
-fAverTracklets(0.),
-fSigmaOnAverTracks(0.), 
-fFilterOnContributors(0),
-fFilterOnTracklets(0),
-fWriteVertices(kTRUE)
-{
-  // Standard constructor with explicit geometry file name assignment
+void AliITSMeanVertexer::Reset(){
+  // Reset averages 
   for(Int_t i=0;i<3;i++){
+    fWeighPosSum[i] = 0.;
+    fWeighSigSum[i] = 0.;
+    fAverPosSum[i] = 0.;
     fWeighPos[i] = 0.;
     fWeighSig[i] = 0.;
     fAverPos[i] = 0.;
     for(Int_t j=0; j<3;j++)fAverPosSq[i][j] = 0.;
+    for(Int_t j=0; j<3;j++)fAverPosSqSum[i][j] = 0.;
+    fNoEventsContr=0;
+    fTotContributors = 0.;
+    if(fVertexXY)fVertexXY->Reset();
+    if(fVertexZ)fVertexZ->Reset();
   }
-  SetLoaderFileName(loaderfilename);
-  SetGeometryFileName(geometryfilename);
-  Init(filename);
 }
-
 //______________________________________________________________________
-void AliITSMeanVertexer::Init(TString &filename){
-  // Initialization part common to different constructors
-  if(filename.IsNull()){
-    AliFatal("Please, provide a valid file name for raw data file\n");
-  }
-  // if file name ends with root a raw reader ROOT is assumed
-  if(filename.EndsWith(".root")){
-    fRawReader = new AliRawReaderRoot(filename);
-  }
-  else {  // DATE raw reader is assumed
-    fRawReader = new AliRawReaderDate(filename);
-    fRawReader->SelectEvents(7);
-  }
-  fRunLoader = AliRunLoader::Open(fLoaderFileName.Data(),AliConfig::GetDefaultEventFolderName(),"recreate");
-  fRunLoader->MakeTree("E");
-  Int_t iEvent = 0;
-  while (fRawReader->NextEvent()) {
-    fRunLoader->SetEventNumber(iEvent);
-    fRunLoader->GetHeader()->Reset(fRawReader->GetRunNumber(), 
-                                  iEvent, iEvent);
-    fRunLoader->MakeTree("H");
-    fRunLoader->TreeE()->Fill();
-    iEvent++;
-  }
-  fRawReader->RewindEvents();
-  fRunLoader->SetNumberOfEventsPerFile(iEvent);
-  fRunLoader->WriteHeader("OVERWRITE");
- Int_t retval = AliConfig::Instance()->AddDetector(fRunLoader->GetEventFolder(),"ITS","ITS");
- if(retval != 0)AliFatal("Not able to add ITS detector");
-  AliITSLoader *loader = new AliITSLoader("ITS",fRunLoader->GetEventFolder()->GetName());
-  fRunLoader->AddLoader(loader);
-  fRunLoader->CdGAFile();
-  fRunLoader->Write(0, TObject::kOverwrite);
+Bool_t AliITSMeanVertexer::Init() {
+  // Initialize filters
   // Initialize geometry
+  // Initialize ITS classes
  
-  AliGeomManager::LoadGeometry(fGeometryFileName.Data());
+  AliGeomManager::LoadGeometry();
+  if (!AliGeomManager::ApplyAlignObjsFromCDB("ITS")) return kFALSE;
 
   AliITSInitGeometry initgeom;
   AliITSgeom *geom = initgeom.CreateAliITSgeom();
+  if (!geom) return kFALSE;
   printf("Geometry name: %s \n",(initgeom.GetGeometryName()).Data());
-  loader->SetITSgeom(geom);
-  // Initialize filter values to their defaults
-  SetFilterOnContributors();
-  SetFilterOnTracklets();
-}
 
-//______________________________________________________________________
-AliITSMeanVertexer::AliITSMeanVertexer(const AliITSMeanVertexer &vtxr) : TObject(vtxr),
-fLoaderFileName(vtxr.fLoaderFileName),
-fGeometryFileName(vtxr.fGeometryFileName),
-fMVFileName(vtxr.fMVFileName),
-fRawReader(vtxr.fRawReader),
-fRunLoader(vtxr.fRunLoader),
-fNoEventsContr(vtxr.fNoEventsContr),
-fTotTracklets(vtxr.fTotTracklets),
-fAverTracklets(vtxr.fAverTracklets),
-fSigmaOnAverTracks(vtxr.fSigmaOnAverTracks),  
-fFilterOnContributors(vtxr.fFilterOnContributors),
-fFilterOnTracklets(vtxr.fFilterOnTracklets),
-fWriteVertices(vtxr.fWriteVertices)
-{
-  // Copy constructor
-  // Copies are not allowed. The method is protected to avoid misuse.
-  AliFatal("Copy constructor not allowed\n");
+  fDetTypeRec = new AliITSDetTypeRec();
+  fDetTypeRec->SetLoadOnlySPDCalib(kTRUE);
+  fDetTypeRec->SetITSgeom(geom);
+  fDetTypeRec->SetDefaults();
+  fDetTypeRec->SetDefaultClusterFindersV2(kTRUE);
 
-}
+  // Initialize filter values to their defaults
+  SetFilterOnContributors();
+  SetCutOnErrX();
+  SetCutOnR();
+  SetCutOnCls();
 
-//______________________________________________________________________
-AliITSMeanVertexer& AliITSMeanVertexer::operator=(const AliITSMeanVertexer&  /* vtxr */ ){
-  // Assignment operator
-  AliError("Assignment operator not allowed\n");
-  return *this;
+  // Instatiate vertexer
+  if (!fMode) {
+    fVertexer = new AliITSVertexer3DTapan(1000);
+  }
+  else {
+    fVertexer = new AliITSVertexer3D();
+    fVertexer->SetDetTypeRec(fDetTypeRec);
+    AliITSVertexer3D* alias = (AliITSVertexer3D*)fVertexer;
+    alias->SetWideFiducialRegion(40.,0.5);
+    alias->SetNarrowFiducialRegion(0.5,0.5);
+    alias->SetDeltaPhiCuts(0.5,0.025);
+    alias->SetDCACut(0.1);
+    alias->SetPileupAlgo(3);
+    fVertexer->SetComputeMultiplicity(kFALSE);
+  }
+  return kTRUE;
 }
 
 //______________________________________________________________________
 AliITSMeanVertexer::~AliITSMeanVertexer() {
   // Destructor
-  delete fRawReader;
-  delete fRunLoader;
-
+  delete fDetTypeRec;
+  delete fVertexXY;
+  delete fVertexZ;
+  delete fVertexer;
 }
 
 //______________________________________________________________________
-void AliITSMeanVertexer::Reconstruct(){
+Bool_t AliITSMeanVertexer::Reconstruct(AliRawReader *rawReader){
   // Performs SPD local reconstruction
-  AliITSLoader* loader = static_cast<AliITSLoader*>(fRunLoader->GetLoader("ITSLoader"));
-  if (!loader) {
-    AliFatal("ITS loader not found");
-    return;
-  }
-  AliITSDetTypeRec* rec = new AliITSDetTypeRec();
-  rec->SetITSgeom(loader->GetITSgeom());
-  rec->SetDefaults();
+  // and vertex finding
+  // returns true in case a vertex is found
 
-  rec->SetDefaultClusterFindersV2(kTRUE);
+  // Run SPD cluster finder
+  AliITSRecPointContainer::Instance()->PrepareToRead();
+  TTree* clustersTree = new TTree("TreeR", "Reconstructed Points Container"); //make a tree
+  fDetTypeRec->DigitsToRecPoints(rawReader,clustersTree,"SPD");
 
-  Int_t nEvents = fRunLoader->GetNumberOfEvents();
-  fRawReader->RewindEvents();
-  for (Int_t iEvent = 0; iEvent < nEvents; iEvent++) {
-    fRawReader->NextEvent();
-    fRunLoader->GetEvent(iEvent);
-    AliDebug(1,Form(">>>>>>>   Processing event number: %d",iEvent));
-    loader->LoadRecPoints("update");
-    loader->CleanRecPoints();
-    loader->MakeRecPointsContainer();
-    TTree *tR = loader->TreeR();
-    if(!tR){
-      AliFatal("Tree R pointer not found - Abort \n");
-      break;
-    }
-    rec->DigitsToRecPoints(fRawReader,tR,"SPD");
-    rec->ResetRecPoints();
-    rec->ResetClusters();    
-    loader->WriteRecPoints("OVERWRITE");
-    loader->UnloadRecPoints();
+  Bool_t vtxOK = kFALSE;
+  UInt_t nl1=0;
+  AliESDVertex *vtx = fVertexer->FindVertexForCurrentEvent(clustersTree);
+  if (!fMode) {
+    if (TMath::Abs(vtx->GetChi2()) < 0.1) vtxOK = kTRUE;
   }
+  else {
+    AliITSRecPointContainer* rpcont= AliITSRecPointContainer::Instance();
+    nl1=rpcont->GetNClustersInLayerFast(1);
+    if(Filter(vtx,nl1)) vtxOK = kTRUE;
+  }
+  delete clustersTree;
+  if (vtxOK && fMode){
+    new(fVertArray[fIndex])AliESDVertex(*vtx);
+    fClu0[fIndex]=nl1;
+    fIndex++;
+  }
+  if (vtx) delete vtx;
 
+  return vtxOK;
 }
 
 //______________________________________________________________________
-void AliITSMeanVertexer::DoVertices(){
-  // Loop on all events and compute 3D vertices
-  AliITSLoader* loader = static_cast<AliITSLoader*>(fRunLoader->GetLoader("ITSLoader"));
-  AliITSVertexer3D *dovert = new AliITSVertexer3D();
-  AliESDVertex *vert = 0;
-  Int_t nevents = fRunLoader->TreeE()->GetEntries();
-  for(Int_t i=0; i<nevents; i++){
-    fRunLoader->GetEvent(i);
-    TTree* cltree = loader->TreeR();
-    vert = dovert->FindVertexForCurrentEvent(cltree);
-    AliMultiplicity *mult = dovert->GetMultiplicity();
-    if(Filter(vert,mult)){
-      AddToMean(vert); 
-      if(fWriteVertices){
-       loader->PostVertex(vert);
-       loader->WriteVertices();
-      }
-    }
-    else {
-      if(vert)delete vert;
+void AliITSMeanVertexer::WriteVertices(const char *filename){
+  // Compute mean vertex and
+  // store it along with the histograms
+  // in a file
+  
+  TFile fmv(filename,"update");
+  Bool_t itisOK = kFALSE;
+  if(ComputeMean(kFALSE)){
+    if(ComputeMean(kTRUE)){
+      Double_t cov[6];
+      cov[0] =  fAverPosSq[0][0];  // variance x
+      cov[1] =  fAverPosSq[0][1];  // cov xy
+      cov[2] =  fAverPosSq[1][1];  // variance y
+      cov[3] =  fAverPosSq[0][2];  // cov xz
+      cov[4] =  fAverPosSq[1][2];  // cov yz
+      cov[5] =  fAverPosSq[2][2];  // variance z
+      AliMeanVertex mv(fWeighPos,fWeighSig,cov,fNoEventsContr,0,0.,0.);
+      mv.SetTitle("Mean Vertex");
+      mv.SetName("MeanVertex");
+      // we have to add chi2 here
+      AliESDVertex vtx(fWeighPos,cov,0,TMath::Nint(fAverContributors),"MeanVertexPos");
+
+      mv.Write(mv.GetName(),TObject::kOverwrite);
+      vtx.Write(vtx.GetName(),TObject::kOverwrite);
+      itisOK = kTRUE;
     }
   }
-  if(ComputeMean()){
-    Double_t cov[6];
-    cov[0] =  fAverPosSq[0][0];  // variance x
-    cov[1] =  fAverPosSq[0][1];  // cov xy
-    cov[2] =  fAverPosSq[1][1];  // variance y
-    cov[3] =  fAverPosSq[0][2];  // cov xz
-    cov[4] =  fAverPosSq[1][2];  // cov yz
-    cov[5] =  fAverPosSq[2][2];  // variance z
-    AliMeanVertex mv(fWeighPos,fWeighSig,cov,nevents,fTotTracklets,fAverTracklets,fSigmaOnAverTracks);
-    mv.SetTitle("Mean Vertex");
-    mv.SetName("Meanvertex");
-    AliDebug(1,Form("Contrib av. trk = %10.2f ",mv.GetAverageNumbOfTracklets()));
-    AliDebug(1,Form("Sigma %10.4f ",mv.GetSigmaOnAvNumbOfTracks()));
-    TFile fmv(fMVFileName.Data(),"recreate");
-    mv.Write();
-    fmv.Close();
-  }
-  else {
+
+  if(!itisOK){
     AliError(Form("Evaluation of mean vertex not possible. Number of used events = %d",fNoEventsContr));
   }
-  delete dovert;
+
+  fVertexXY->Write(fVertexXY->GetName(),TObject::kOverwrite);
+  fVertexZ->Write(fVertexZ->GetName(),TObject::kOverwrite);
+  fmv.Close();
 }
 
 //______________________________________________________________________
-Bool_t AliITSMeanVertexer::Filter(AliESDVertex *vert,AliMultiplicity *mult){
+Bool_t AliITSMeanVertexer::Filter(AliESDVertex *vert,UInt_t mult){
   // Apply selection criteria to events
   Bool_t status = kFALSE;
-  if(!vert || !mult)return status;
+  if(!vert)return status;
+  // Remove vertices reconstructed with vertexerZ
+  if(strcmp(vert->GetName(),"SPDVertexZ") == 0) return status;
   Int_t ncontr = vert->GetNContributors();
-  Int_t ntracklets = mult->GetNumberOfTracklets();
   AliDebug(1,Form("Number of contributors = %d",ncontr));
-  AliDebug(1,Form("Number of tracklets = %d",ntracklets));
-  if(ncontr>fFilterOnContributors && ntracklets > fFilterOnTracklets) status = kTRUE;
-  fAverTracklets += ntracklets;
-  fSigmaOnAverTracks += ntracklets*ntracklets;
+  Double_t ex = vert->GetXRes();
+  if(ncontr>fFilterOnContributors && (mult>fLowSPD0 && mult<fHighSPD0) && 
+     ((ex*1000.)<fErrXCut)) {
+    status = kTRUE;
+    fAccEvents.SetBitNumber(fIndex);
+  }
   return status;
 }
 
@@ -311,39 +248,61 @@ void AliITSMeanVertexer::AddToMean(AliESDVertex *vert){
   for(Int_t i=0;i<3;i++)if(currentSigma[i] == 0.)goon = kFALSE;
   if(!goon)return;
   for(Int_t i=0;i<3;i++){
-    fWeighPos[i]+=currentPos[i]/currentSigma[i]/currentSigma[i];
-    fWeighSig[i]+=1./currentSigma[i]/currentSigma[i];
-    fAverPos[i]+=currentPos[i];
+    fWeighPosSum[i]+=currentPos[i]/currentSigma[i]/currentSigma[i];
+    fWeighSigSum[i]+=1./currentSigma[i]/currentSigma[i];
+    fAverPosSum[i]+=currentPos[i];
   }
   for(Int_t i=0;i<3;i++){
     for(Int_t j=i;j<3;j++){
-      fAverPosSq[i][j] += currentPos[i] * currentPos[j];
+      fAverPosSqSum[i][j] += currentPos[i] * currentPos[j];
     }
   }
+
+  fTotContributors+=vert->GetNContributors();
+  fVertexXY->Fill(currentPos[0],currentPos[1]);
+  fVertexZ->Fill(currentPos[2]);
+
   fNoEventsContr++;
 }
 
 //______________________________________________________________________
-Bool_t AliITSMeanVertexer::ComputeMean(){
-  // compute mean vertex
-  if(fNoEventsContr < 2) return kFALSE;
-  Double_t nevents = fNoEventsContr;
-  for(Int_t i=0;i<3;i++){
-    fWeighPos[i] /= fWeighSig[i]; 
-    fWeighSig[i] = 1./TMath::Sqrt(fWeighSig[i]);
-    fAverPos[i] /= nevents;
-  } 
-  for(Int_t i=0;i<3;i++){
-    for(Int_t j=i;j<3;j++){
-      fAverPosSq[i][j] /= (nevents -1.);
-      fAverPosSq[i][j] -= nevents/(nevents -1.)*fAverPos[i]*fAverPos[j];
-    }
-  } 
-  fTotTracklets = fAverTracklets;  //  total number of tracklets used 
-  fAverTracklets /= nevents;
-  fSigmaOnAverTracks /= (nevents - 1);
-  Double_t tmp = nevents/(nevents -1.)*fAverTracklets*fAverTracklets;
-  fSigmaOnAverTracks -= tmp;
-  fSigmaOnAverTracks = TMath::Sqrt(fSigmaOnAverTracks);
-  return kTRUE;
-}
+ Bool_t AliITSMeanVertexer::ComputeMean(Bool_t killOutliers){
+   // compute mean vertex
+   // called once with killOutliers = kFALSE and then again with
+   // killOutliers = kTRUE
+   Double_t wpos[3];
+   for(Int_t i=0;i<3;i++)wpos[i]=fWeighPos[i];
+   Reset();
+   for(Int_t i=0;i<fVertArray.GetEntries();i++){
+     AliESDVertex* vert = NULL;
+
+     // second pass
+     if(killOutliers && fAccEvents.TestBitNumber(i)){
+       vert=(AliESDVertex*)fVertArray[i];
+       Double_t dist=(vert->GetXv()-wpos[0])*(vert->GetXv()-wpos[0]);
+       dist+=(vert->GetYv()-wpos[1])*(vert->GetYv()-wpos[1]);
+       dist=sqrt(dist)*10.;    // distance in mm
+       if(dist>fRCut)fAccEvents.SetBitNumber(i,kFALSE);
+     }
+     
+     if(!fAccEvents.TestBitNumber(i))continue;
+     vert=(AliESDVertex*)fVertArray[i];
+     AddToMean(vert);
+   }
+   if(fNoEventsContr < 2) return kFALSE;
+   Double_t nevents = fNoEventsContr;
+   for(Int_t i=0;i<3;i++){
+     fWeighPos[i] = fWeighPosSum[i]/fWeighSigSum[i]; 
+     fWeighSig[i] = 1./TMath::Sqrt(fWeighSigSum[i]);
+     fAverPos[i] = fAverPosSum[i]/nevents;
+   } 
+   for(Int_t i=0;i<3;i++){
+     for(Int_t j=i;j<3;j++){
+       fAverPosSq[i][j] = fAverPosSqSum[i][j]/(nevents -1.);
+       fAverPosSq[i][j] -= nevents/(nevents -1.)*fAverPos[i]*fAverPos[j];
+     }
+   } 
+   
+   fAverContributors = fTotContributors/nevents;
+   return kTRUE;
+ }