]> git.uio.no Git - u/mrichter/AliRoot.git/blobdiff - MUON/AliMUONTrackReconstructor.cxx
Being more realistic with gain calibration (Laurent)
[u/mrichter/AliRoot.git] / MUON / AliMUONTrackReconstructor.cxx
index d4adc7aa20c0ee7d65c70544ded3e8624a05b4b9..32002e0aa19587b017058a15c1ad57cd85684a47 100644 (file)
  * about the suitability of this software for any purpose. It is          *
  * provided "as is" without express or implied warranty.                  *
  **************************************************************************/
-/*
-$Log$
-Revision 1.7  2001/01/26 21:54:46  morsch
-Use access functions to AliMUONHit member data.
 
+/* $Id$ */
 
-Revision 1.6  2001/01/26 20:00:53  hristov
-Major upgrade of AliRoot code
+/// \class AliMUONTrackReconstructor
+/// MUON track reconstructor using the original method
+///
+/// This class contains as data:
+/// - the parameters for the track reconstruction
+///
+/// It contains as methods, among others:
+/// - MakeTracks to build the tracks
+///
 
-Revision 1.4  2000/12/21 22:14:38  morsch
-Clean-up of coding rule violations.
+#include "AliMUONTrackReconstructor.h"
 
-Revision 1.3  2000/10/02 21:28:09  fca
-Removal of useless dependecies via forward declarations
+#include "AliMUONConstants.h"
+#include "AliMUONHitForRec.h"
+#include "AliMUONTrack.h"
+#include "AliMUONTrackParam.h"
+#include "AliMUONTrackExtrap.h"
+#include "AliLog.h"
 
-Revision 1.2  2000/06/15 07:58:49  morsch
-Code from MUON-dev joined
-
-Revision 1.1.2.7  2000/06/09 22:06:29  morsch
-Some coding rule violations corrected. Will soon be obsolete.
-
-Revision 1.1.2.6  2000/05/02 07:15:29  morsch
-Put back TH1.h and TH2.h includes.
-
-Revision 1.1.2.5  2000/02/17 18:12:43  morsch
-Corrections in trackf_read_spoint causing segmentation violations in previous version (I. Chevrot)
-New histos (I. Chevrot)
-
-Revision 1.1.2.4  2000/02/15 18:01:08  morsch
-Log messages
-
-Revision 1.1.2.3  2000/02/15 17:59:01  morsch
-Log message added
-
-Revision 1.1.2.2  2000/02/15 18:54:56  morsch
-Reference between track contributing to reconstructed hit and particle corrected  
-*/
-
-#include "AliCallf77.h" 
-#include "AliMUONTrackReconstructor.h" 
-#include "AliRun.h"
-#include "AliMUON.h"
-#include "AliMC.h"
-
-#include "AliMUONHit.h"
-#include "AliMUONPadHit.h"
-#include "AliMUONDigit.h"
-#include "AliMUONRawCluster.h"
-#include "AliMUONReconstHit.h"
-
-#include "AliPDG.h"
-
-#include <TRandom.h> 
-#include <TFile.h> 
-#include <TH1.h>
-#include <TH2.h>  
-#include <TTree.h> 
-#include <TParticle.h> 
 #include <TMinuit.h>
-#include <iostream.h>
+#include <Riostream.h>
+#include <TMath.h>
+#include <TMatrixD.h>
 
-#ifndef WIN32 
-# define reco_init       reco_init_
-# define cutpxz          cutpxz_
-# define sigmacut        sigmacut_
-# define xpreci          xpreci_
-# define ypreci          ypreci_
-# define reconstmuon     reconstmuon_
-# define reconstmuon2    reconstmuon2_
-# define trackf_read_geant     trackf_read_geant_
-# define trackf_read_fit     trackf_read_fit_
-# define trackf_read_spoint     trackf_read_spoint_
-# define chfill          chfill_
-# define chfill2         chfill2_
-# define chf1            chf1_
-# define chfnt           chfnt_
-# define hist_create     hist_create_
-# define hist_closed     hist_closed_
-# define rndm            rndm_
-# define fcn             fcn_
-# define trackf_fit      trackf_fit_
-# define prec_fit        prec_fit_
-# define fcnfit          fcnfit_
-# define reco_term       reco_term_
-#else 
-# define reco_init       RECO_INIT
-# define cutpxz          CUTPXZ
-# define sigmacut        SIGMACUT
-# define xpreci          XPRECI
-# define ypreci          YPRECI
-# define reconstmuon     RECONSTMUON
-# define reconstmuon2    RECONSTMUON2
-# define trackf_read_geant     TRACKF_READ_GEANT
-# define trackf_read_fit     TRACKF_READ_FIT
-# define trackf_read_spoint     TRACKF_READ_SPOINT
-# define chfill          CHFILL
-# define chfill2         CHFILL2
-# define chf1            CHF1
-# define chfnt           CHFNT
-# define hist_create     HIST_CREATE
-# define hist_closed     HIST_CLOSED
-# define rndm            RNDM
-# define fcn             FCN
-# define trackf_fit      TRACKF_FIT
-# define prec_fit        PREC_FIT
-# define fcnfit          FCNFIT
-# define reco_term       RECO_TERM
-#endif 
+// Functions to be minimized with Minuit
+void TrackChi2(Int_t &nParam, Double_t *gradient, Double_t &chi2, Double_t *param, Int_t flag);
 
-extern "C"
-{
-void type_of_call reco_init(Double_t &, Double_t &, Double_t &);
-void type_of_call reco_term();
-void type_of_call cutpxz(Double_t &);
-void type_of_call sigmacut(Double_t &);
-void type_of_call xpreci(Double_t &);
-void type_of_call ypreci(Double_t &);
-void type_of_call reconstmuon(Int_t &, Int_t &, Int_t &, Int_t &, Int_t &);
-void type_of_call reconstmuon2(Int_t &, Int_t &, Int_t &);
-void type_of_call trackf_read_fit(Int_t &, Int_t &, Int_t &, Int_t *, Double_t *, Double_t *);
-void type_of_call trackf_read_geant(Int_t *, Double_t *, Double_t *, Double_t *, Int_t *, Int_t *, Double_t *, Double_t *, Double_t *, Double_t *,Int_t &, Double_t *, Double_t *, Double_t *, Int_t &, Int_t &, Double_t *, Double_t *, Double_t *, Double_t *); 
-void type_of_call trackf_read_spoint(Int_t *, Double_t *, Double_t *, Double_t *, Int_t *, Int_t *, Double_t *, Double_t *, Double_t *, Double_t *,Int_t &, Double_t *, Double_t *, Double_t *, Int_t &, Int_t &, Double_t *, Double_t *, Double_t *, Double_t *); 
-void type_of_call chfill(Int_t &, Float_t &, Float_t &, Float_t &);
-void type_of_call chfill2(Int_t &, Float_t &, Float_t &, Float_t &);
-void type_of_call chf1(Int_t &, Float_t &, Float_t &);
-void type_of_call chfnt(Int_t &, Int_t &, Int_t *, Int_t *, Float_t *, Float_t *, Float_t *, Float_t *, Float_t *, Float_t *, Float_t *, Float_t *);
-void type_of_call hist_create();
-void type_of_call hist_closed();
-void type_of_call fcnf(Int_t &, Double_t *, Double_t &, Double_t *, Int_t);
-void type_of_call fcn(Int_t &, Double_t *, Double_t &, Double_t *, Int_t &, Int_t &);
-void type_of_call trackf_fit(Int_t &, Double_t *, Double_t *, Double_t &, Double_t &, Double_t &, Double_t &, Double_t &);
-void type_of_call prec_fit(Double_t &, Double_t &, Double_t &, Double_t &, Double_t&, Double_t &, Double_t &, Double_t &, Double_t &, Double_t &, Double_t &, Double_t &, Double_t &, Double_t &, Double_t &);
-void type_of_call fcnfitf(Int_t &, Double_t *, Double_t &, Double_t *, Int_t);
-void type_of_call fcnfit(Int_t &, Double_t *, Double_t &, Double_t *, Int_t &, Int_t &);
-Float_t type_of_call rndm() {return gRandom->Rndm();}
-void type_of_call fit_trace(Float_t &, Float_t &, Float_t &, Float_t &, Float_t &, Float_t &, Int_t &, Int_t &, Int_t &, Int_t &);
-}
-
-static TTree *gAliNtupleGlobal;
-static TFile *gAliFileGlobal;
-static TTree *gAliTreeK1;
-static TTree *gAliTrH1;
-static TClonesArray *gAliHits2;        //List of hits for one track only
-static TClonesArray *gAliParticles2;   //List of particles in the Kine tree
+/// \cond CLASSIMP
+ClassImp(AliMUONTrackReconstructor) // Class implementation in ROOT context
+/// \endcond
 
+//************* Parameters for reconstruction
+const Double_t AliMUONTrackReconstructor::fgkBendingVertexDispersion = 10.;
+const Double_t AliMUONTrackReconstructor::fgkNonBendingVertexDispersion = 10.;
 
-// variables of the tracking ntuple 
-struct { 
-  Int_t ievr;           // number of event 
-  Int_t ntrackr;        // number of tracks per event
-  Int_t istatr[500];    // 1 = good muon, 2 = ghost, 0 = something else
-  Int_t isignr[500];    // sign of the track
-  Float_t pxr[500];     // x momentum of the reconstructed track
-  Float_t pyr[500];     // y momentum of the reconstructed track
-  Float_t pzr[500];     // z momentum of the reconstructed track
-  Float_t zvr[500];     // z vertex 
-  Float_t chi2r[500];   // chi2 of the fit of the track with the field map
-  Float_t pxv[500];     // x momentum at vertex
-  Float_t pyv[500];     // y momentum at vertex
-  Float_t pzv[500];     // z momentum at vertex
-} NtupleSt;
 
-ClassImp(AliMUONTrackReconstructor)
-
-//___________________________________________________
+//__________________________________________________________________________
 AliMUONTrackReconstructor::AliMUONTrackReconstructor()
+  : AliMUONVTrackReconstructor()
 {
-// Constructor
-//
-   fSPxzCut   = 3.0;
-   fSSigmaCut = 4.0;
-   fSXPrec    = 0.01; 
-   fSYPrec    = 0.144;
+  /// Constructor for class AliMUONTrackReconstructor
+  AliInfo("*** Original tracking ***");
 }
 
-//_____________________________________________________________________________
-void AliMUONTrackReconstructor::Reconst2(Int_t &ifit, Int_t &idebug, Int_t &nev)
+//__________________________________________________________________________
+AliMUONTrackReconstructor::~AliMUONTrackReconstructor()
 {
-//
-//
-    reconstmuon2(ifit,idebug,nev);
-}
+/// Destructor
+} 
 
-//_____________________________________________________________________________
-void AliMUONTrackReconstructor::Reconst(Int_t &ifit, Int_t &idebug, Int_t bgdEvent, Int_t &nev, Int_t &idres, Int_t &ireadgeant, Option_t *option,Text_t *filename)
+  //__________________________________________________________________________
+void AliMUONTrackReconstructor::MakeTrackCandidates()
 {
-  //
-  // open kine and hits tree of background file for reconstruction of geant hits 
-  // call tracking fortran program
-  static Bool_t first=kTRUE;
-  static TFile *pFile;
-  char *addBackground = strstr(option,"Add");
-  
-  if (addBackground ) { // only in case of background with geant hits 
-    if(first) {
-      fFileName=filename;
-      cout<<"filename  "<<fFileName<<endl;
-      pFile=new TFile(fFileName);
-      cout<<"I have opened "<<fFileName<<" file "<<endl;
-      gAliHits2     = new TClonesArray("AliMUONHit",1000);
-      gAliParticles2 = new TClonesArray("TParticle",1000);
-      first=kFALSE;
-    }
-    pFile->cd();
-    if(gAliHits2) gAliHits2->Clear();
-    if(gAliParticles2) gAliParticles2->Clear();
-    if(gAliTrH1) delete gAliTrH1;
-    gAliTrH1=0;
-    if(gAliTreeK1) delete gAliTreeK1;
-    gAliTreeK1=0;
-    // Get Hits Tree header from file
-    char treeName[20];
-    sprintf(treeName,"TreeH%d",bgdEvent);
-    gAliTrH1 = (TTree*)gDirectory->Get(treeName);
-    //     printf("gAliTrH1 %p of treename %s for event %d \n",gAliTrH1,treeName,bgdEvent);
-    if (!gAliTrH1) {
-      printf("ERROR: cannot find Hits Tree for event:%d\n",bgdEvent);
-    }
-    // set branch addresses
-    TBranch *branch;
-    char branchname[30];
-    AliMUON *pMUON  = (AliMUON*) gAlice->GetModule("MUON");  
-    sprintf(branchname,"%s",pMUON->GetName());       
-    if (gAliTrH1 && gAliHits2) {
-      branch = gAliTrH1->GetBranch(branchname);
-      if (branch) branch->SetAddress(&gAliHits2);
-    }
-    gAliTrH1->GetEntries();
-    // get the Kine tree
-    sprintf(treeName,"TreeK%d",bgdEvent);
-    gAliTreeK1 = (TTree*)gDirectory->Get(treeName);
-    if (!gAliTreeK1) {
-      printf("ERROR: cannot find Kine Tree for event:%d\n",bgdEvent);
-    }
-    // set branch addresses
-    if (gAliTreeK1) 
-      gAliTreeK1->SetBranchAddress("Particles", &gAliParticles2);
-    gAliTreeK1->GetEvent(0);
+  /// To make track candidates:
+  /// Start with segments station(1..) 4 or 5 then follow track in station 5 or 4.
+  /// Good candidates are made of at least three hitForRec's.
+  /// Keep only best candidates or all of them according to the flag fgkTrackAllTracks.
+  TClonesArray *segments;
+  AliMUONTrack *track;
+  Int_t iCandidate = 0;
+
+  AliDebug(1,"Enter MakeTrackCandidates");
+
+  // Loop over stations(1..) 5 and 4 and make track candidates
+  for (Int_t istat=4; istat>=3; istat--) {
     
-    // get back to the first file
-    TTree *treeK = gAlice->TreeK();
-    TFile *file1 = 0;
-    if (treeK) file1 = treeK->GetCurrentFile();
-    file1->cd();
+    // Make segments in the station
+    segments = MakeSegmentsInStation(istat);
     
-  } // end if addBackground
+    // Loop over segments
+    for (Int_t iseg=0; iseg<segments->GetEntriesFast(); iseg++) 
+    {
+      AliDebug(1,Form("Making primary candidate(1..) %d",++iCandidate));
+      
+      // Transform segments to tracks and put them at the end of fRecTracksPtr
+      track = new ((*fRecTracksPtr)[fRecTracksPtr->GetLast()+1]) AliMUONTrack((AliMUONObjectPair*)((*segments)[iseg]));
+      fNRecTracks++;
+      
+      // Printout for debuging
+      if ((AliLog::GetDebugLevel("MUON","AliMUONTrackReconstructor") >= 2) || (AliLog::GetGlobalDebugLevel() >= 2))
+      {
+        cout<<endl<<"Track parameter covariances at first hit with multiple Coulomb scattering effects:"<<endl;
+        ((AliMUONTrackParam*) track->GetTrackParamAtHit()->First())->GetCovariances().Print();
+      }
+      
+      // Look for compatible hitForRec(s) in the other station
+      if (!FollowTrackInStation(*track,7-istat)) {
+        fRecTracksPtr->Remove(track);
+       fNRecTracks--;
+      }
+      
+    }
+    
+    // delete the array of segments
+    delete segments;
+  }
+  
+  fRecTracksPtr->Compress(); // this is essential before checking tracks
+  
+  // Keep all different tracks or only the best ones as required
+  if (fgkTrackAllTracks) RemoveIdenticalTracks();
+  else RemoveDoubleTracks();
+  
+  AliDebug(1,Form("Number of good candidates = %d",fNRecTracks));
   
-  // call tracking fortran program
-  reconstmuon(ifit,idebug,nev,idres,ireadgeant);
 }
 
-//________________________________________________________________________________
-void AliMUONTrackReconstructor::Init(Double_t &seff, Double_t &sb0, Double_t &sbl3)
+  //__________________________________________________________________________
+void AliMUONTrackReconstructor::FollowTracks()
 {
-  //
-  // introduce in fortran program somme parameters and cuts for tracking 
-  // create output file "reconst.root" (histos + ntuple)
-  cutpxz(fSPxzCut);          // Pxz cut (GeV/c) to begin the track finding
-  sigmacut(fSSigmaCut);      // Number of sigmas delimiting the searching areas
-  xpreci(fSXPrec);           // Chamber precision in X (cm) 
-  ypreci(fSYPrec);           // Chamber precision in Y (cm)
-  reco_init(seff,sb0,sbl3);
+  /// Follow tracks in stations(1..) 3, 2 and 1
+  AliDebug(1,"Enter FollowTracks");
+  
+  AliMUONTrack *track, *nextTrack;
+  Int_t currentNRecTracks;
+  Bool_t hitFound;
+  
+  for (Int_t station = 2; station >= 0; station--) {
+    
+    // Save the actual number of reconstructed track in case of
+    // tracks are added or suppressed during the tracking procedure
+    // !! Do not compress fRecTracksPtr until the end of the loop over tracks !!
+    currentNRecTracks = fNRecTracks;
+    
+    for (Int_t iRecTrack = 0; iRecTrack <currentNRecTracks; iRecTrack++) {
+      AliDebug(1,Form("FollowTracks: track candidate(1..) %d", iRecTrack+1));
+      
+      track = (AliMUONTrack*) fRecTracksPtr->UncheckedAt(iRecTrack);
+      
+      // Fit the track:
+      // Do not take into account the multiple scattering to speed up the fit
+      // Calculate the track parameter covariance matrix
+      // If "station" is station(1..) 3 then use the vertex to better constrain the fit
+      if (station==2) {
+        SetVertexForFit(*track);
+        track->SetFitWithVertex(kTRUE);
+      } else track->SetFitWithVertex(kFALSE);
+      Fit(*track, kFALSE, kTRUE);
+      
+      // Remove the track if the normalized chi2 is too high
+      if (track->GetNormalizedChi2() > fgkSigmaToCutForTracking * fgkSigmaToCutForTracking) {
+       fRecTracksPtr->Remove(track);
+       fNRecTracks--;
+       continue;
+      }
+      
+      // Printout for debuging
+      if ((AliLog::GetDebugLevel("MUON","AliMUONTrackReconstructor") >= 2) || (AliLog::GetGlobalDebugLevel() >= 2)) {
+        cout<<endl<<"Track parameter covariances at first hit with multiple Coulomb scattering effects:"<<endl;
+        ((AliMUONTrackParam*) track->GetTrackParamAtHit()->First())->GetCovariances().Print();
+      }
+      
+      // Look for compatible hitForRec in station(0..) "station"
+      hitFound = FollowTrackInStation(*track,station);
+      
+      // Try to recover track if required
+      if (!hitFound && fgkRecoverTracks) hitFound = RecoverTrack(*track,station);
+      
+      // remove track if no hit found
+      if (!hitFound) {
+       fRecTracksPtr->Remove(track);
+       fNRecTracks--;
+      }
+      
+    }
+    
+    // Compress fRecTracksPtr for the next step
+    fRecTracksPtr->Compress();
+    
+    // Keep only the best tracks if required
+    if (!fgkTrackAllTracks) RemoveDoubleTracks();
+    
+  }
+  
+  // Last fit of track candidates with all station
+  // Take into account the multiple scattering and remove bad tracks
+  Int_t trackIndex = -1;
+  track = (AliMUONTrack*) fRecTracksPtr->First();
+  while (track) {
+    
+    trackIndex++;
+    nextTrack = (AliMUONTrack*) fRecTracksPtr->After(track); // prepare next track
+    
+    track->SetFitWithVertex(kFALSE); // just to be sure
+    Fit(*track, kTRUE, kTRUE);
+    
+    // Printout for debuging
+    if (AliLog::GetGlobalDebugLevel() >= 3) {
+      cout << "FollowTracks: track candidate(0..) " << trackIndex << " after final fit" << endl;
+      track->RecursiveDump();
+    } 
+    
+    // Remove the track if the normalized chi2 is too high
+    if (track->GetNormalizedChi2() > fgkSigmaToCutForTracking * fgkSigmaToCutForTracking) {
+      fRecTracksPtr->Remove(track);
+      fNRecTracks--;
+    }
+    
+    track = nextTrack;
+    
+  }
+  
+  fRecTracksPtr->Compress();
+  
 }
 
-//__________________________________________
-void AliMUONTrackReconstructor::FinishEvent()
+  //__________________________________________________________________________
+Bool_t AliMUONTrackReconstructor::FollowTrackInStation(AliMUONTrack &trackCandidate, Int_t nextStation)
 {
-   // Finish
-   // TTree *treeK = gAlice->TreeK();
-   // TFile *file1 = 0;
-   // if (treeK) file1 = treeK->GetCurrentFile();
-   // file1->cd();
+  /// Follow trackCandidate in station(0..) nextStation and search for compatible HitForRec(s)
+  /// Keep all possibilities or only the best one(s) according to the flag fgkTrackAllTracks:
+  /// kTRUE:  duplicate "trackCandidate" if there are several possibilities and add the new tracks at the end of
+  ///         fRecTracksPtr to avoid conficts with other track candidates at this current stage of the tracking procedure.
+  ///         Remove the obsolete "trackCandidate" at the end.
+  /// kFALSE: add only the best hit(s) to the "trackCandidate". Try to add a couple of hits in priority.
+  AliDebug(1,Form("Enter FollowTrackInStation(1..) %d", nextStation+1));
+  
+  // Order the chamber according to the propagation direction (tracking starts with chamber 2):
+  // - nextStation == station(1...) 5 => forward propagation
+  // - nextStation < station(1...) 5 => backward propagation
+  Int_t ch1, ch2;
+  if (nextStation==4) {
+    ch1 = 2*nextStation+1;
+    ch2 = 2*nextStation;
+  } else {
+    ch1 = 2*nextStation;
+    ch2 = 2*nextStation+1;
+  }
+  
+  Double_t zCh2 = AliMUONConstants::DefaultChamberZ(ch2);
+  Double_t chi2WithOneHitForRec = 1.e10;
+  Double_t chi2WithTwoHitForRec = 1.e10;
+  Double_t maxChi2WithOneHitForRec = 2. * fgkSigmaToCutForTracking * fgkSigmaToCutForTracking; // 2 because 2 quantities in chi2
+  Double_t maxChi2WithTwoHitForRec = 4. * fgkSigmaToCutForTracking * fgkSigmaToCutForTracking; // 4 because 4 quantities in chi2
+  Double_t bestChi2WithOneHitForRec = maxChi2WithOneHitForRec;
+  Double_t bestChi2WithTwoHitForRec = maxChi2WithTwoHitForRec;
+  Bool_t foundOneHit = kFALSE;
+  Bool_t foundTwoHits = kFALSE;
+  AliMUONTrack *newTrack = 0x0;
+  AliMUONHitForRec *hitForRecCh1, *hitForRecCh2;
+  AliMUONTrackParam extrapTrackParamAtHit1;
+  AliMUONTrackParam extrapTrackParamAtHit2;
+  AliMUONTrackParam bestTrackParamAtHit1;
+  AliMUONTrackParam bestTrackParamAtHit2;
+  Bool_t *hitForRecCh1Used = new Bool_t[fNHitsForRecPerChamber[ch1]];
+  for (Int_t hit1 = 0; hit1 < fNHitsForRecPerChamber[ch1]; hit1++) hitForRecCh1Used[hit1] = kFALSE;
+  
+  // Get track parameters and extrapolate them to chamber "ch2" to save computing time in the next steps
+  AliMUONTrackParam extrapTrackParamAtCh2(*(AliMUONTrackParam*)trackCandidate.GetTrackParamAtHit()->First());
+  
+  // Add MCS effect
+  AliMUONTrackExtrap::AddMCSEffect(&extrapTrackParamAtCh2,AliMUONConstants::ChamberThicknessInX0(),1.);
+  
+  // Add MCS in the missing chamber if any (only 1 chamber can be missing according to tracking criteria)
+  if (ch1 < ch2 && extrapTrackParamAtCh2.GetHitForRecPtr()->GetChamberNumber() > ch2 + 1) {
+    // extrapolation to the missing chamber
+    AliMUONTrackExtrap::ExtrapToZCov(&extrapTrackParamAtCh2, AliMUONConstants::DefaultChamberZ(ch2 + 1));
+    // add MCS effect
+    AliMUONTrackExtrap::AddMCSEffect(&extrapTrackParamAtCh2,AliMUONConstants::ChamberThicknessInX0(),1.);
+  }
+  
+  //Extrapolate trackCandidate to chamber "ch2"
+  AliMUONTrackExtrap::ExtrapToZCov(&extrapTrackParamAtCh2, zCh2);
+  
+  // Printout for debuging
+  if ((AliLog::GetDebugLevel("MUON","AliMUONTrackReconstructor") >= 2) || (AliLog::GetGlobalDebugLevel() >= 2)) {
+    cout<<endl<<"Track parameter covariances at first hit extrapolated to z = "<<zCh2<<":"<<endl;
+    extrapTrackParamAtCh2.GetCovariances().Print();
+  }
+  
+  // Printout for debuging
+  if ((AliLog::GetDebugLevel("MUON","AliMUONTrackReconstructor") >= 1) || (AliLog::GetGlobalDebugLevel() >= 1)) {
+    cout << "FollowTrackInStation: look for hits in chamber(1..): " << ch2+1 << endl;
+  }
+  
+  // look for candidates in chamber 2 
+  for (Int_t hit2 = 0; hit2 < fNHitsForRecPerChamber[ch2]; hit2++) {
+    
+    hitForRecCh2 = (AliMUONHitForRec*) fHitsForRecPtr->UncheckedAt(fIndexOfFirstHitForRecPerChamber[ch2]+hit2);
+    
+    // try to add the current hit
+    chi2WithOneHitForRec = TryOneHitForRec(extrapTrackParamAtCh2, hitForRecCh2, extrapTrackParamAtHit2);
+    
+    // if good chi2 then try to attach a hitForRec in the other chamber too
+    if (chi2WithOneHitForRec < maxChi2WithOneHitForRec) {
+      Bool_t foundSecondHit = kFALSE;
+      
+      // Printout for debuging
+      if ((AliLog::GetDebugLevel("MUON","AliMUONTrackReconstructor") >= 1) || (AliLog::GetGlobalDebugLevel() >= 1)) {
+        cout << "FollowTrackInStation: found one hit in chamber(1..): " << ch2+1
+            << " (Chi2 = " << chi2WithOneHitForRec << ")" << endl;
+        cout << "                      look for second hits in chamber(1..): " << ch1+1 << " ..." << endl;
+      }
+      
+      // add MCS effect for next step
+      AliMUONTrackExtrap::AddMCSEffect(&extrapTrackParamAtHit2,AliMUONConstants::ChamberThicknessInX0(),1.);
+      
+      for (Int_t hit1 = 0; hit1 < fNHitsForRecPerChamber[ch1]; hit1++) {
+        
+       hitForRecCh1 = (AliMUONHitForRec*) fHitsForRecPtr->UncheckedAt(fIndexOfFirstHitForRecPerChamber[ch1]+hit1);
+       
+       // try to add the current hit in addition to the one found on the previous chamber
+       chi2WithTwoHitForRec = TryTwoHitForRec(extrapTrackParamAtHit2, hitForRecCh1, extrapTrackParamAtHit1);
+        
+       // if good chi2 then create a new track by adding the 2 hitForRec to the "trackCandidate"
+       if (chi2WithTwoHitForRec < maxChi2WithTwoHitForRec) {
+         foundSecondHit = kTRUE;
+          foundTwoHits = kTRUE;
+          
+         // Printout for debuging
+         if ((AliLog::GetDebugLevel("MUON","AliMUONTrackReconstructor") >= 1) || (AliLog::GetGlobalDebugLevel() >= 1)) {
+           cout << "FollowTrackInStation: found second hit in chamber(1..): " << ch1+1
+                << " (Global Chi2 = " << chi2WithTwoHitForRec << ")" << endl;
+         }
+         
+         if (fgkTrackAllTracks) {
+           // copy trackCandidate into a new track put at the end of fRecTracksPtr and add the new hitForRec's
+            newTrack = new ((*fRecTracksPtr)[fRecTracksPtr->GetLast()+1]) AliMUONTrack(trackCandidate);
+           UpdateTrack(*newTrack,extrapTrackParamAtHit1,extrapTrackParamAtHit2);
+           fNRecTracks++;
+           
+           // Tag hitForRecCh1 as used
+           hitForRecCh1Used[hit1] = kTRUE;
+           
+           // Printout for debuging
+           if ((AliLog::GetDebugLevel("MUON","AliMUONTrackReconstructor") >= 1) || (AliLog::GetGlobalDebugLevel() >= 1)) {
+             cout << "FollowTrackInStation: added two hits in station(1..): " << nextStation+1 << endl;
+             if (AliLog::GetGlobalDebugLevel() >= 3) newTrack->RecursiveDump();
+           }
+           
+          } else if (chi2WithTwoHitForRec < bestChi2WithTwoHitForRec) {
+           // keep track of the best couple of hits
+           bestChi2WithTwoHitForRec = chi2WithTwoHitForRec;
+           bestTrackParamAtHit1 = extrapTrackParamAtHit1;
+           bestTrackParamAtHit2 = extrapTrackParamAtHit2;
+          }
+         
+       }
+       
+      }
+      
+      // if no hitForRecCh1 found then consider to add hitForRecCh2 only
+      if (!foundSecondHit) {
+        foundOneHit = kTRUE;
+        
+       if (fgkTrackAllTracks) {
+         // copy trackCandidate into a new track put at the end of fRecTracksPtr and add the new hitForRec's
+          newTrack = new ((*fRecTracksPtr)[fRecTracksPtr->GetLast()+1]) AliMUONTrack(trackCandidate);
+         UpdateTrack(*newTrack,extrapTrackParamAtHit2);
+         fNRecTracks++;
+         
+         // Printout for debuging
+         if ((AliLog::GetDebugLevel("MUON","AliMUONTrackReconstructor") >= 1) || (AliLog::GetGlobalDebugLevel() >= 1)) {
+           cout << "FollowTrackInStation: added one hit in chamber(1..): " << ch2+1 << endl;
+           if (AliLog::GetGlobalDebugLevel() >= 3) newTrack->RecursiveDump();
+         }
+         
+       } else if (!foundTwoHits && chi2WithOneHitForRec < bestChi2WithOneHitForRec) {
+         // keep track of the best single hitForRec except if a couple
+          // of hits has already been found (i.e. bestHitForRec2!=0x0)
+         bestChi2WithOneHitForRec = chi2WithOneHitForRec;
+         bestTrackParamAtHit1 = extrapTrackParamAtHit2;
+        }
+       
+      }
+      
+    }
+    
+  }
+  
+  // look for candidates in chamber 1 not already attached to a track
+  // if we want to keep all possible tracks or if no good couple of hitForRec has been found
+  if (fgkTrackAllTracks || !foundTwoHits) {
+    
+    // Printout for debuging
+    if ((AliLog::GetDebugLevel("MUON","AliMUONTrackReconstructor") >= 1) || (AliLog::GetGlobalDebugLevel() >= 1)) {
+      cout << "FollowTrackInStation: look for single hits in chamber(1..): " << ch1+1 << endl;
+    }
+    
+    // add MCS effect for next step
+    AliMUONTrackExtrap::AddMCSEffect(&extrapTrackParamAtCh2,AliMUONConstants::ChamberThicknessInX0(),1.);
+      
+    for (Int_t hit1 = 0; hit1 < fNHitsForRecPerChamber[ch1]; hit1++) {
+      
+      hitForRecCh1 = (AliMUONHitForRec*) fHitsForRecPtr->UncheckedAt(fIndexOfFirstHitForRecPerChamber[ch1]+hit1);
+      
+      if (hitForRecCh1Used[hit1]) continue; // Skip hitForRec already used
+      
+      // try to add the current hit
+      chi2WithOneHitForRec = TryOneHitForRec(extrapTrackParamAtCh2, hitForRecCh1, extrapTrackParamAtHit1);
+    
+      // if good chi2 then consider to add hitForRecCh1
+      // We do not try to attach a hitForRec in the other chamber too since it has already been done above
+      if (chi2WithOneHitForRec < maxChi2WithOneHitForRec) {
+        foundOneHit = kTRUE;
+         
+       // Printout for debuging
+       if ((AliLog::GetDebugLevel("MUON","AliMUONTrackReconstructor") >= 1) || (AliLog::GetGlobalDebugLevel() >= 1)) {
+         cout << "FollowTrackInStation: found one hit in chamber(1..): " << ch1+1
+              << " (Chi2 = " << chi2WithOneHitForRec << ")" << endl;
+       }
+       
+       if (fgkTrackAllTracks) {
+         // copy trackCandidate into a new track put at the end of fRecTracksPtr and add the new hitForRec's
+         newTrack = new ((*fRecTracksPtr)[fRecTracksPtr->GetLast()+1]) AliMUONTrack(trackCandidate);
+         UpdateTrack(*newTrack,extrapTrackParamAtHit1);
+         fNRecTracks++;
+         
+         // Printout for debuging
+         if ((AliLog::GetDebugLevel("MUON","AliMUONTrackReconstructor") >= 1) || (AliLog::GetGlobalDebugLevel() >= 1)) {
+           cout << "FollowTrackInStation: added one hit in chamber(1..): " << ch1+1 << endl;
+           if (AliLog::GetGlobalDebugLevel() >= 3) newTrack->RecursiveDump();
+         }
+         
+       } else if (chi2WithOneHitForRec < bestChi2WithOneHitForRec) {
+         // keep track of the best single hitForRec except if a couple
+         // of hits has already been found (i.e. bestHitForRec1!=0x0)
+         bestChi2WithOneHitForRec = chi2WithOneHitForRec;
+         bestTrackParamAtHit1 = extrapTrackParamAtHit1;
+       }
+       
+      }
+      
+    }
+    
+  }
+  
+  // fill out the best track if required else clean up the fRecTracksPtr array
+  if (!fgkTrackAllTracks) {
+    if (foundTwoHits) {
+      UpdateTrack(trackCandidate,bestTrackParamAtHit1,bestTrackParamAtHit2);
+      
+      // Printout for debuging
+      if ((AliLog::GetDebugLevel("MUON","AliMUONTrackReconstructor") >= 1) || (AliLog::GetGlobalDebugLevel() >= 1)) {
+        cout << "FollowTrackInStation: added the two best hits in station(1..): " << nextStation+1 << endl;
+        if (AliLog::GetGlobalDebugLevel() >= 3) newTrack->RecursiveDump();
+      }
+      
+    } else if (foundOneHit) {
+      UpdateTrack(trackCandidate,bestTrackParamAtHit1);
+      
+      // Printout for debuging
+      if ((AliLog::GetDebugLevel("MUON","AliMUONTrackReconstructor") >= 1) || (AliLog::GetGlobalDebugLevel() >= 1)) {
+        cout << "FollowTrackInStation: added the best hit in chamber(1..): " << bestTrackParamAtHit1.GetHitForRecPtr()->GetChamberNumber()+1 << endl;
+        if (AliLog::GetGlobalDebugLevel() >= 3) newTrack->RecursiveDump();
+      }
+      
+    } else return kFALSE;
+    
+  } else if (foundOneHit || foundTwoHits) {
+    
+    // remove obsolete track
+    fRecTracksPtr->Remove(&trackCandidate);
+    fNRecTracks--;
+    
+  } else return kFALSE;
+  
+  return kTRUE;
+  
 }
 
-//_____________________________________
-void AliMUONTrackReconstructor::Close()
+  //__________________________________________________________________________
+Double_t AliMUONTrackReconstructor::TryTwoHitForRec(const AliMUONTrackParam &trackParamAtHit1, AliMUONHitForRec* hitForRec2, AliMUONTrackParam &trackParamAtHit2)
 {
-  //
-  // write histos and ntuple to "reconst.root" file
-    reco_term();
+/// Test the compatibility between the track and the 2 hitForRec together (using trackParam's covariance matrix):
+/// return the corresponding Chi2 accounting for covariances between the 2 hitForRec
+/// return trackParamAtHit1 & 2
+  
+  if (!trackParamAtHit1.CovariancesExist()) AliWarning(" track parameter covariance matrix does not exist");
+  AliMUONHitForRec* hitForRec1 = trackParamAtHit1.GetHitForRecPtr();
+  if (!hitForRec1) AliFatal(" no hitForRec attached to trackParamAtHit1");
+  
+  // extrapolate track parameters at the z position of the second hit
+  trackParamAtHit2.SetParameters(trackParamAtHit1.GetParameters());
+  trackParamAtHit2.SetZ(trackParamAtHit1.GetZ());
+  AliMUONTrackExtrap::ExtrapToZ(&trackParamAtHit2, hitForRec2->GetZ());
+  
+  // set pointer to hit2 into trackParamAtHit2
+  trackParamAtHit2.SetHitForRecPtr(hitForRec2);
+  
+  // Set differences between track and the 2 hitForRec in the bending and non bending directions
+  TMatrixD dPos(4,1);
+  dPos(0,0) = hitForRec1->GetNonBendingCoor() - trackParamAtHit1.GetNonBendingCoor();
+  dPos(1,0) = hitForRec1->GetBendingCoor() - trackParamAtHit1.GetBendingCoor();
+  dPos(2,0) = hitForRec2->GetNonBendingCoor() - trackParamAtHit2.GetNonBendingCoor();
+  dPos(3,0) = hitForRec2->GetBendingCoor() - trackParamAtHit2.GetBendingCoor();
+  
+  // quick tests of hitForRec compatibility within a wide road of x*y = 1*1 cm2 to save computing time
+  if (TMath::Abs(dPos(0,0)) > fgkMaxTrackingDistanceNonBending ||
+      TMath::Abs(dPos(1,0)) > fgkMaxTrackingDistanceBending    ||
+      TMath::Abs(dPos(2,0)) > fgkMaxTrackingDistanceNonBending ||
+      TMath::Abs(dPos(3,0)) > fgkMaxTrackingDistanceBending) return 1.e10;
+  
+  // Calculate the error matrix from the track parameter covariances at first hitForRec
+  TMatrixD error(4,4);
+  error.Zero();
+  if (trackParamAtHit1.CovariancesExist()) {
+    // Save track parameters at first hitForRec
+    AliMUONTrackParam trackParamAtHit1Save(trackParamAtHit1);
+    TMatrixD paramAtHit1Save(trackParamAtHit1Save.GetParameters());
+    Double_t z1 = trackParamAtHit1Save.GetZ();
+    
+    // Save track coordinates at second hitForRec
+    Double_t nonBendingCoor2        = trackParamAtHit2.GetNonBendingCoor();
+    Double_t bendingCoor2           = trackParamAtHit2.GetBendingCoor();
+    
+    // add MCS effect at first hitForRec
+    AliMUONTrackExtrap::AddMCSEffect(&trackParamAtHit1Save,AliMUONConstants::ChamberThicknessInX0(),1.);
+    
+    // Get the pointer to the parameter covariance matrix at first hitForRec
+    const TMatrixD& kParamCov = trackParamAtHit1Save.GetCovariances();
+    
+    // Calculate the jacobian related to the transformation between track parameters
+    // at first hitForRec and track coordinates at the 2 hitForRec z-position
+    TMatrixD jacob(4,5);
+    jacob.Zero();
+    // first derivative at the first hitForRec:
+    jacob(0,0) = 1.; // dx1/dx
+    jacob(1,2) = 1.; // dy1/dy
+    // first derivative at the second hitForRec:
+    TMatrixD dParam(5,1);
+    for (Int_t i=0; i<5; i++) {
+      // Skip jacobian calculation for parameters with no associated error
+      if (kParamCov(i,i) == 0.) continue;
+      // Small variation of parameter i only
+      for (Int_t j=0; j<5; j++) {
+        if (j==i) {
+          dParam(j,0) = TMath::Sqrt(kParamCov(i,i));
+         if (j == 4) dParam(j,0) *= TMath::Sign(1.,-paramAtHit1Save(4,0)); // variation always in the same direction
+        } else dParam(j,0) = 0.;
+      }
+      
+      // Set new track parameters at first hitForRec
+      trackParamAtHit1Save.SetParameters(paramAtHit1Save);
+      trackParamAtHit1Save.AddParameters(dParam);
+      trackParamAtHit1Save.SetZ(z1);
+      
+      // Extrapolate new track parameters to the z position of the second hitForRec
+      AliMUONTrackExtrap::ExtrapToZ(&trackParamAtHit1Save,hitForRec2->GetZ());
+      
+      // Calculate the jacobian
+      jacob(2,i) = (trackParamAtHit1Save.GetNonBendingCoor()  - nonBendingCoor2) / dParam(i,0); // dx2/dParami
+      jacob(3,i) = (trackParamAtHit1Save.GetBendingCoor()     - bendingCoor2   ) / dParam(i,0); // dy2/dParami
+    }
+    
+    // Calculate the error matrix
+    TMatrixD tmp(jacob,TMatrixD::kMult,kParamCov);
+    error = TMatrixD(tmp,TMatrixD::kMultTranspose,jacob);
+  }
+  
+  // Add hitForRec resolution to the error matrix
+  error(0,0) += hitForRec1->GetNonBendingReso2();
+  error(1,1) += hitForRec1->GetBendingReso2();
+  error(2,2) += hitForRec2->GetNonBendingReso2();
+  error(3,3) += hitForRec2->GetBendingReso2();
+  
+  // invert the error matrix for Chi2 calculation
+  if (error.Determinant() != 0) {
+    error.Invert();
+  } else {
+    AliWarning(" Determinant error=0");
+    return 1.e10;
+  }
+  
+  // Compute the Chi2 value
+  TMatrixD tmp2(dPos,TMatrixD::kTransposeMult,error);
+  TMatrixD result(tmp2,TMatrixD::kMult,dPos);
+  
+  return result(0,0);
+  
 }
 
-//________________________________________________________
-void chfill(Int_t &id, Float_t &x, Float_t &y, Float_t &w)
+  //__________________________________________________________________________
+void AliMUONTrackReconstructor::UpdateTrack(AliMUONTrack &track, AliMUONTrackParam &trackParamAtHit)
 {
-  //
-  // fill histo like hfill in fortran
-    char name[5];
-    sprintf(name,"h%d",id);
-    TH1F *h1 = (TH1F*) gDirectory->Get(name);
-    h1->Fill(x);
+  /// Add 1 hit to the track candidate
+  /// Update chi2 of the track 
+  
+  // Compute local chi2
+  AliMUONHitForRec* hit = trackParamAtHit.GetHitForRecPtr();
+  Double_t deltaX = trackParamAtHit.GetNonBendingCoor() - hit->GetNonBendingCoor();
+  Double_t deltaY = trackParamAtHit.GetBendingCoor() - hit->GetBendingCoor();
+  Double_t localChi2 = deltaX*deltaX / hit->GetNonBendingReso2() +
+                      deltaY*deltaY / hit->GetBendingReso2();
+  
+  // Update the chi2 of the new track
+  track.SetFitFMin(track.GetFitFMin() + localChi2);
+  
+  // Update TrackParamAtHit
+  track.AddTrackParamAtHit(&trackParamAtHit,trackParamAtHit.GetHitForRecPtr());
+  track.GetTrackParamAtHit()->Sort();
+  
 }
 
-//_________________________________________________________
-void chfill2(Int_t &id, Float_t &x, Float_t &y, Float_t &w)
+  //__________________________________________________________________________
+void AliMUONTrackReconstructor::UpdateTrack(AliMUONTrack &track, AliMUONTrackParam &trackParamAtHit1, AliMUONTrackParam &trackParamAtHit2)
 {
-  //
-  // fill histo like hfill2 in fortran
-    char name[5];
-    sprintf(name,"h%d",id);
-    TH2F *h2 = (TH2F*) gDirectory->Get(name);
-    h2->Fill(x,y,w);
+  /// Add 2 hits to the track candidate
+  /// Update track and local chi2
+  
+  // Update local chi2 at first hit
+  AliMUONHitForRec* hit1 = trackParamAtHit1.GetHitForRecPtr();
+  Double_t deltaX = trackParamAtHit1.GetNonBendingCoor() - hit1->GetNonBendingCoor();
+  Double_t deltaY = trackParamAtHit1.GetBendingCoor() - hit1->GetBendingCoor();
+  Double_t localChi2AtHit1 = deltaX*deltaX / hit1->GetNonBendingReso2() +
+                            deltaY*deltaY / hit1->GetBendingReso2();
+  trackParamAtHit1.SetLocalChi2(localChi2AtHit1);
+  
+  // Flag first hit as being removable
+  trackParamAtHit1.SetRemovable(kTRUE);
+  
+  // Update local chi2 at second hit
+  AliMUONHitForRec* hit2 = trackParamAtHit2.GetHitForRecPtr();
+  deltaX = trackParamAtHit2.GetNonBendingCoor() - hit2->GetNonBendingCoor();
+  deltaY = trackParamAtHit2.GetBendingCoor() - hit2->GetBendingCoor();
+  Double_t localChi2AtHit2 = deltaX*deltaX / hit2->GetNonBendingReso2() +
+                            deltaY*deltaY / hit2->GetBendingReso2();
+  trackParamAtHit2.SetLocalChi2(localChi2AtHit2);
+  
+  // Flag first hit as being removable
+  trackParamAtHit2.SetRemovable(kTRUE);
+  
+  // Update the chi2 of the new track
+  track.SetFitFMin(track.GetFitFMin() + localChi2AtHit1 + localChi2AtHit2);
+  
+  // Update TrackParamAtHit
+  track.AddTrackParamAtHit(&trackParamAtHit1,trackParamAtHit1.GetHitForRecPtr());
+  track.AddTrackParamAtHit(&trackParamAtHit2,trackParamAtHit2.GetHitForRecPtr());
+  track.GetTrackParamAtHit()->Sort();
+  
 }
 
-//__________________________________________
-void chf1(Int_t &id, Float_t &x, Float_t &w)
+  //__________________________________________________________________________
+Bool_t AliMUONTrackReconstructor::RecoverTrack(AliMUONTrack &trackCandidate, Int_t nextStation)
 {
-  //
-  // fill histo like hf1 in fortran
-    char name[5];
-    sprintf(name,"h%d",id);
-    TH1F *h1 = (TH1F*) gDirectory->Get(name);
-    h1->Fill(x,w);
+  /// Try to recover the track candidate in the next station
+  /// by removing the worst of the two hits attached in the current station
+  /// Return kTRUE if recovering succeeds
+  AliDebug(1,"Enter RecoverTrack");
+  
+  // Do not try to recover track until we have attached hit(s) on station(1..) 3
+  if (nextStation > 1) return kFALSE;
+  
+  Int_t worstHitNumber = -1;
+  Double_t localChi2, worstLocalChi2 = 0.;
+  
+  // Look for the hit to remove
+  for (Int_t hitNumber = 0; hitNumber < 2; hitNumber++) {
+    AliMUONTrackParam *trackParamAtHit = (AliMUONTrackParam*)trackCandidate.GetTrackParamAtHit()->UncheckedAt(hitNumber);
+    
+    // check if current hit is removable
+    if (!trackParamAtHit->IsRemovable()) return kFALSE;
+    
+    // Pick up hit with the worst chi2
+    localChi2 = trackParamAtHit->GetLocalChi2();
+    if (localChi2 > worstLocalChi2) {
+      worstLocalChi2 = localChi2;
+      worstHitNumber = hitNumber;
+    }
+  }
+  
+  // Reset best hit as being NOT removable
+  ((AliMUONTrackParam*)trackCandidate.GetTrackParamAtHit()->UncheckedAt((worstHitNumber+1)%2))->SetRemovable(kFALSE);
+  
+  // Remove the worst hit
+  trackCandidate.RemoveTrackParamAtHit((AliMUONTrackParam*)trackCandidate.GetTrackParamAtHit()->UncheckedAt(worstHitNumber));
+  
+  // Re-fit the track:
+  // Do not take into account the multiple scattering to speed up the fit
+  // Calculate the track parameter covariance matrix
+  trackCandidate.SetFitWithVertex(kFALSE); // To be sure
+  Fit(trackCandidate, kFALSE, kTRUE);
+  
+  // Look for new hit(s) in next station
+  return FollowTrackInStation(trackCandidate,nextStation);
+  
 }
 
-//_________________
-void hist_create()
+  //__________________________________________________________________________
+void AliMUONTrackReconstructor::SetVertexForFit(AliMUONTrack &trackCandidate)
 {
-  //
-  // Create an output file ("reconst.root")
-  // Create some histograms and an ntuple
-
-    gAliFileGlobal = new TFile("reconst.root","RECREATE","Ntuple - reconstruction");
-
-   gAliNtupleGlobal = new TTree("ntuple","Reconst ntuple");
-   gAliNtupleGlobal->Branch("ievr",&NtupleSt.ievr,"ievr/I");
-   gAliNtupleGlobal->Branch("ntrackr",&NtupleSt.ntrackr,"ntrackr/I");
-   gAliNtupleGlobal->Branch("istatr",&NtupleSt.istatr[0],"istatr[500]/I");
-   gAliNtupleGlobal->Branch("isignr",&NtupleSt.isignr[0],"isignr[500]/I");
-   gAliNtupleGlobal->Branch("pxr",&NtupleSt.pxr[0],"pxr[500]/F");
-   gAliNtupleGlobal->Branch("pyr",&NtupleSt.pyr[0],"pyr[500]/F");
-   gAliNtupleGlobal->Branch("pzr",&NtupleSt.pzr[0],"pzr[500]/F");
-   gAliNtupleGlobal->Branch("zvr",&NtupleSt.zvr[0],"zvr[500]/F");
-   gAliNtupleGlobal->Branch("chi2r",&NtupleSt.chi2r[0],"chi2r[500]/F");
-   gAliNtupleGlobal->Branch("pxv",&NtupleSt.pxv[0],"pxv[500]/F");
-   gAliNtupleGlobal->Branch("pyv",&NtupleSt.pyv[0],"pyv[500]/F");
-   gAliNtupleGlobal->Branch("pzv",&NtupleSt.pzv[0],"pzv[500]/F");
-
-   // test aliroot
-
-  new TH1F("h100","particule id du hit geant",20,0.,20.);
-  new TH1F("h101","position en x du hit geant",100,-200.,200.);
-  new TH1F("h102","position en y du hit geant",100,-200.,200.);
-  new TH1F("h103","chambre de tracking concernee",15,0.,14.);
-  new TH1F("h104","moment ptot du hit geant",50,0.,100.);
-  new TH1F("h105","px au vertex",50,0.,20.);
-  new TH1F("h106","py au vertex",50,0.,20.);
-  new TH1F("h107","pz au vertex",50,0.,20.);
-  new TH1F("h108","position zv",50,-15.,15.);
-  new TH1F("h109","position en x du hit reconstruit",100,-300.,300.);
-  new TH1F("h110","position en y du hit reconstruit",100,-300.,300.);
-  new TH1F("h111","delta x station 1",100,-0.3,0.3);
-  new TH1F("h112","delta x station 2",100,-0.3,0.3);
-  new TH1F("h113","delta x station 3",100,-0.3,0.3);
-  new TH1F("h114","delta x station 4",100,-0.5,0.5);
-  new TH1F("h115","delta x station 5",100,-0.5,0.5);
-  new TH1F("h116","delta x station 1",100,-2,2);
-  new TH1F("h117","delta x station 2",100,-2,2);
-  new TH1F("h121","delta y station 1",100,-0.04,0.04);
-  new TH1F("h122","delta y station 2",100,-0.04,0.04);
-  new TH1F("h123","delta y station 3",100,-0.04,0.04);
-  new TH1F("h124","delta y station 4",100,-0.04,0.04);
-  new TH1F("h125","delta y station 5",100,-0.04,0.04);
-
-  /*  char hname[30];
-      char hname1[30];
-      for (int i=0;i<10;i++) {
-      sprintf(hname,"deltax%d",i);
-      sprintf(hname1,"h12%d",i);
-      new TH1F(hname1,hname ,100,-0.4,0.4);
-      sprintf(hname,"deltay%d",i);
-      sprintf(hname1,"h13%d",i);
-      new TH1F(hname1,hname ,100,-0.4,0.4);
-      }
-  */
-  new TH2F("h2000","VAR X st. 5",30,3.0,183.0,100,0.,25.);
-  new TH2F("h2001","VAR Y st. 5",30,3.0,183.0,100,0.,25.);
-
-  new TH2F("h2500","P vs X HHIT",30,3.0,183.0,200,0.,200.);
-  new TH2F("h2501","P vs X HHIT**2",30,3.0,183.0,200,0.,5000.);
-  new TH2F("h2502","P vs X EPH2 st. 5",30,3.0,183.0,100,0.,0.000005);
-  new TH2F("h2503","P vs X EAL2 st. 5",30,3.0,183.0,100,0.,0.01);
-  //new TH2F("h2504","P vs X EXM2 st. 5",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2504","P vs X EXM2 st. 5",30,3.0,183.0,100,0.,0.1);
-  new TH2F("h2505","P vs X EYM2 st. 5",30,3.0,183.0,100,0.,30.);
-
-  new TH2F("h2507","P vs X EPH st. 5",30,3.0,183.0,100,0.,0.003);
-  new TH2F("h2508","P vs X EAL st. 5",30,3.0,183.0,100,0.,0.3);
-  //new TH2F("h2509","P vs X EXM st. 5",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2509","P vs X EXM st. 5",30,3.0,183.0,100,0.,0.4);
-  new TH2F("h2510","P vs X EYM st. 5",30,3.0,183.0,100,0.,30.);
-
-  new TH2F("h2511","P vs X EPH cut st. 5",30,3.0,183.0,100,0.,0.01);
-  new TH2F("h2512","P vs X EAL cut st. 5",30,3.0,183.0,100,0.,0.3);
-  //new TH2F("h2513","P vs X EXM cut st. 5",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2513","P vs X EXM cut st. 5",30,3.0,183.0,100,0.,0.4);
-  new TH2F("h2514","P vs X EYM cut st. 5",30,3.0,183.0,100,0.,30.);
-  // 4
-  new TH2F("h2400","P vs X HHIT",30,3.0,183.0,200,0.,200.);
-  new TH2F("h2401","P vs X HHIT**2",30,3.0,183.0,200,0.,5000.);
-  new TH2F("h2402","P vs X EPH2 st. 4",30,3.0,183.0,100,0.,0.000005);
-  new TH2F("h2403","P vs X EAL2 st. 4",30,3.0,183.0,100,0.,0.05);
-  //new TH2F("h2404","P vs X EXM2 st. 4",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2404","P vs X EXM2 st. 4",30,3.0,183.0,100,0.,0.1);
-  new TH2F("h2405","P vs X EYM2 st. 4",30,3.0,183.0,100,0.,30.);
-
-  new TH2F("h2407","P vs X EPH st. 4",30,3.0,183.0,100,0.,0.003);
-  new TH2F("h2408","P vs X EAL st. 4",30,3.0,183.0,100,0.,0.3);
-  //new TH2F("h2409","P vs X EXM st. 4",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2409","P vs X EXM st. 4",30,3.0,183.0,100,0.,0.1);
-  new TH2F("h2410","P vs X EYM st. 4",30,3.0,183.0,100,0.,30.);
-
-  new TH2F("h2411","P vs X EPH cut st. 4",30,3.0,183.0,100,0.,0.01);
-  new TH2F("h2412","P vs X EAL cut st. 4",30,3.0,183.0,100,0.,0.3);
-  //new TH2F("h2413","P vs X EXM cut st. 4",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2413","P vs X EXM cut st. 4",30,3.0,183.0,100,0.,0.1);
-  new TH2F("h2414","P vs X EYM cut st. 4",30,3.0,183.0,100,0.,30.);
-  // 3
-  new TH1F("h2301","P2",30,3.0,183.0);
-  new TH2F("h2302","P2 vs X EPH2 st. 3",30,3.0,183.0,100,0.,0.0006);
-  new TH2F("h2303","P2 vs X EAL2 st. 3",30,3.0,183.0,100,0.,0.0005);
-  //new TH2F("h2304","P2 vs X EXM2 st. 3",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2304","P2 vs X EXM2 st. 3",30,3.0,183.0,100,0.,2.);
-  new TH2F("h2305","P2 vs X EYM2 st. 3",30,3.0,183.0,100,0.,3.);
-
-  new TH2F("h2307","P vs X EPH2 st. 3",30,3.0,183.0,100,0.,0.0006);
-  new TH2F("h2308","P vs X EAL2 st. 3",30,3.0,183.0,100,0.,0.005);
-  //new TH2F("h2309","P vs X EXM2 st. 3",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2309","P vs X EXM2 st. 3",30,3.0,183.0,100,0.,2.);
-  new TH2F("h2310","P vs X EYM2 st. 3",30,3.0,183.0,100,0.,3.);
-
-  new TH2F("h2311","P vs X EPH cut st. 3",30,3.0,183.0,100,0.,0.06);
-  new TH2F("h2312","P vs X EAL cut st. 3",30,3.0,183.0,100,0.,0.05);
-  //new TH2F("h2313","P vs X EXM cut st. 3",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2313","P vs X EXM cut st. 3",30,3.0,183.0,100,0.,6.);
-  new TH2F("h2314","P vs X EYM cut st. 3",30,3.0,183.0,100,0.,7.);
-
-  new TH2F("h2315","P2 vs X EPH cut st. 3",30,3.0,183.0,100,0.,0.06);
-  new TH2F("h2316","P2 vs X EAL cut st. 3",30,3.0,183.0,100,0.,0.05);
-  //new TH2F("h2317","P2 vs X EXM cut st. 3",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2317","P2 vs X EXM cut st. 3",30,3.0,183.0,100,0.,6.);
-  new TH2F("h2318","P2 vs X EYM cut st. 3",30,3.0,183.0,100,0.,7.);
-  
-  // 2
-  new TH1F("h2201","P2",30,3.0,183.0);
-  new TH2F("h2202","P2 vs X EPH2 st. 2",30,3.0,183.0,100,0.,0.0006);
-  new TH2F("h2203","P2 vs X EAL2 st. 2",30,3.0,183.0,100,0.,0.005);
-  //new TH2F("h2204","P2 vs X EXM2 st. 2",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2204","P2 vs X EXM2 st. 2",30,3.0,183.0,100,0.,7.);
-  new TH2F("h2205","P2 vs X EYM2 st. 2",30,3.0,183.0,100,0.,5.);
-
-  new TH2F("h2207","P vs X EPH2 st. 2",30,3.0,183.0,100,0.,0.0006);
-  new TH2F("h2208","P vs X EAL2 st. 2",30,3.0,183.0,100,0.,0.005);
-  //new TH2F("h2209","P vs X EXM2 st. 2",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2209","P vs X EXM2 st. 2",30,3.0,183.0,100,0.,7.);
-  new TH2F("h2210","P vs X EYM2 st. 2",30,3.0,183.0,100,0.,5.);
-
-  new TH2F("h2211","P vs X EPH cut st. 2",30,3.0,183.0,100,0.,0.05);
-  new TH2F("h2212","P vs X EAL cut st. 2",30,3.0,183.0,100,0.,0.2);
-  //new TH2F("h2213","P vs X EXM cut st. 2",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2213","P vs X EXM cut st. 2",30,3.0,183.0,100,0.,11.);
-  new TH2F("h2214","P vs X EYM cut st. 2",30,3.0,183.0,100,0.,10.);
-
-  new TH2F("h2215","P2 vs X EPH cut st. 2",30,3.0,183.0,100,0.,0.05);
-  new TH2F("h2216","P2 vs X EAL cut st. 2",30,3.0,183.0,100,0.,0.2);
-  //new TH2F("h2217","P2 vs X EXM cut st. 2",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2217","P2 vs X EXM cut st. 2",30,3.0,183.0,100,0.,11.);
-  new TH2F("h2218","P2 vs X EYM cut st. 2",30,3.0,183.0,100,0.,10.);
-
-  // 1
-  new TH2F("h2102","P2 vs X EPH2 st. 2",30,3.0,183.0,100,0.,0.0006);
-  new TH2F("h2103","P2 vs X EAL2 st. 2",30,3.0,183.0,100,0.,0.005);
-  //new TH2F("h2104","P2 vs X EXM2 st. 2",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2104","P2 vs X EXM2 st. 2",30,3.0,183.0,100,0.,7.);
-  new TH2F("h2105","P2 vs X EYM2 st. 2",30,3.0,183.0,100,0.,7.);
-
-  new TH2F("h2107","P vs X EPH2 st. 2",30,3.0,183.0,100,0.,0.0006);
-  new TH2F("h2108","P vs X EAL2 st. 2",30,3.0,183.0,100,0.,0.005);
-  //new TH2F("h2109","P vs X EXM2 st. 2",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2109","P vs X EXM2 st. 2",30,3.0,183.0,100,0.,7.);
-  new TH2F("h2110","P vs X EYM2 st. 2",30,3.0,183.0,100,0.,7.);
-
-  new TH2F("h2111","P vs X EPH cut st. 2",30,3.0,183.0,100,0.,0.1);
-  new TH2F("h2112","P vs X EAL cut st. 2",30,3.0,183.0,100,0.,0.2);
-  //new TH2F("h2113","P vs X EXM cut st. 2",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2113","P vs X EXM cut st. 2",30,3.0,183.0,100,0.,11.);
-  new TH2F("h2114","P vs X EYM cut st. 2",30,3.0,183.0,100,0.,11.);
-
-  new TH2F("h2115","P2 vs X EPH cut st. 2",30,3.0,183.0,100,0.,0.1);
-  new TH2F("h2116","P2 vs X EAL cut st. 2",30,3.0,183.0,100,0.,0.2);
-  //new TH2F("h2117","P2 vs X EXM cut st. 2",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2117","P2 vs X EXM cut st. 2",30,3.0,183.0,100,0.,11.);
-  new TH2F("h2118","P2 vs X EYM cut st. 2",30,3.0,183.0,100,0.,11.);
-
-  // 2,3,4,5
-  new TH1F("h2701","P2 fit 2",30,3.0,183.0);
-  new TH2F("h2702","P2 vs X EPH2 st. 1 fit 2",30,3.0,183.0,100,0.,0.0006);
-  new TH2F("h2703","P2 vs X EAL2 st. 1 fit 2",30,3.0,183.0,100,0.,0.005);
-  // new TH2F("h2704","P2 vs X EXM2 st. 1 fit 2",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2704","P2 vs X EXM2 st. 1 fit 2",30,3.0,183.0,100,0.,2.);
-  new TH2F("h2705","P2 vs X EYM2 st. 1 fit 2",30,3.0,183.0,100,0.,3.);
-
-  new TH2F("h2707","P vs X EPH2 st. 1 fit 2",30,3.0,183.0,100,0.,0.0006);
-  new TH2F("h2708","P vs X EAL2 st. 1 fit 2",30,3.0,183.0,100,0.,0.005);
-  //new TH2F("h2709","P vs X EXM2 st. 1 fit 2",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2709","P vs X EXM2 st. 1 fit 2",30,3.0,183.0,100,0.,2.);
-  new TH2F("h2710","P vs X EYM2 st. 1 fit 2",30,3.0,183.0,100,0.,3.);
-
-  new TH2F("h2711","P vs X EPH cut st. 1 fit 2",30,3.0,183.0,100,0.,0.07);
-  new TH2F("h2712","P vs X EAL cut st. 1 fit 2",30,3.0,183.0,100,0.,0.2);
-  //new TH2F("h2713","P vs X EXM cut st. 1 fit 2",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2713","P vs X EXM cut st. 1 fit 2",30,3.0,183.0,100,0.,6.);
-  new TH2F("h2714","P vs X EYM cut st. 1 fit 2",30,3.0,183.0,100,0.,7.);
-
-  new TH2F("h2715","P2 vs X EPH cut st. 1 fit 2",30,3.0,183.0,100,0.,0.07);
-  new TH2F("h2716","P2 vs X EAL cut st. 1 fit 2",30,3.0,183.0,100,0.,0.2);
-  //new TH2F("h2717","P2 vs X EXM cut st. 1 fit 2",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2717","P2 vs X EXM cut st. 1 fit 2",30,3.0,183.0,100,0.,6.);
-  new TH2F("h2718","P2 vs X EYM cut st. 1 fit 2",30,3.0,183.0,100,0.,7.);
-
-  // 1,3,4,5
-  new TH1F("h2801","P2 fit 1",30,3.0,183.0);
-  new TH2F("h2802","P2 vs X EPH2 st. 2 fit 1",30,3.0,183.0,100,0.,0.0006);
-  new TH2F("h2803","P2 vs X EAL2 st. 2 fit 1",30,3.0,183.0,100,0.,0.005);
-  //new TH2F("h2804","P2 vs X EXM2 st. 2 fit 1",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2804","P2 vs X EXM2 st. 2 fit 1",30,3.0,183.0,100,0.,2.);
-  new TH2F("h2805","P2 vs X EYM2 st. 2 fit 1",30,3.0,183.0,100,0.,3.);
-
-  new TH2F("h2807","P vs X EPH2 st. 2 fit 1",30,3.0,183.0,100,0.,0.0006);
-  new TH2F("h2808","P vs X EAL2 st. 2 fit 1",30,3.0,183.0,100,0.,0.005);
-  //new TH2F("h2809","P vs X EXM2 st. 2 fit 1",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2809","P vs X EXM2 st. 2 fit 1",30,3.0,183.0,100,0.,2.);
-  new TH2F("h2810","P vs X EYM2 st. 2 fit 1",30,3.0,183.0,100,0.,3.);
-
-  new TH2F("h2811","P vs X EPH cut st. 2 fit 1",30,3.0,183.0,100,0.,0.05);
-  new TH2F("h2812","P vs X EAL cut st. 2 fit 1",30,3.0,183.0,100,0.,0.2);
-  //new TH2F("h2813","P vs X EXM cut st. 2 fit 1",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2813","P vs X EXM cut st. 2 fit 1",30,3.0,183.0,100,0.,5.);
-  new TH2F("h2814","P vs X EYM cut st. 2 fit 1",30,3.0,183.0,100,0.,7.);
-
-  new TH2F("h2815","P2 vs X EPH cut st. 2 fit 1",30,3.0,183.0,100,0.,0.05);
-  new TH2F("h2816","P2 vs X EAL cut st. 2 fit 1",30,3.0,183.0,100,0.,0.2);
-  //new TH2F("h2817","P2 vs X EXM cut st. 2 fit 1",30,3.0,183.0,100,0.,1.5);
-  new TH2F("h2817","P2 vs X EXM cut st. 2 fit 1",30,3.0,183.0,100,0.,5.);
-  new TH2F("h2818","P2 vs X EYM cut st. 2 fit 1",30,3.0,183.0,100,0.,7.);
-
-
-  new TH2F("h1111","dx vs x station 1",30,-250.,250.,30,-0.5,0.5);
-  new TH2F("h1112","dx vs x station 2",30,-250.,250.,30,-0.5,0.5);
-  new TH2F("h1113","dx vs x station 3",30,-250.,250.,30,-0.5,0.5);
-  new TH2F("h1114","dx vs x station 4",30,-250.,250.,30,-0.5,0.5);
-  new TH2F("h1115","dx vs x station 5",30,-250.,250.,30,-0.5,0.5);
-  new TH2F("h1121","dy vs y station 1",30,-250.,250.,30,-0.04,0.04);
-  new TH2F("h1122","dy vs y station 2",30,-250.,250.,30,-0.04,0.04);
-  new TH2F("h1123","dy vs y station 3",30,-250.,250.,30,-0.04,0.04);
-  new TH2F("h1124","dy vs y station 4",30,-250.,250.,30,-0.04,0.04);
-  new TH2F("h1125","dy vs y station 5",30,-250.,250.,30,-0.04,0.04);
-
-  // fin de test
-
-  new TH1F("h500","Acceptance en H st. 4",500,0.,500.);
-  new TH1F("h600","Acceptance en H st. 5",500,0.,500.);
-  new TH1F("h700","X vertex track found",200,-10.,10.);
-  new TH1F("h701","Y vertex track found",200,-10.,10.);
-  new TH1F("h800","Rap. muon gen.",100,0.,5.);
-  new TH1F("h801","Rap. muon gen. recons.",100,0.,5.);
-  new TH1F("h802","Rap. muon gen. ghost ",100,0.,5.);
-  new TH1F("h900","Pt muon gen.",100,0.,20.);
-  new TH1F("h901","Pt muon gen. recons.",100,0.,20.);
-  new TH1F("h902","Pt muon gen. ghost",100,0.,20.);
-  new TH1F("h910","phi muon gen.",100,-10.,10.);
-  new TH1F("h911","phi muon gen. recons.",100,-10.,10.);
-  new TH1F("h912","phi muon gen. ghost",100,-10.,10.);
-  new TH2F("h1001","Y VS X hit st. 1",300,-300.,300.,300,-300.,300.);
-  new TH2F("h1002","Y VS X hit st. 2",300,-300.,300.,300,-300.,300.);
-  new TH2F("h1003","Y VS X hit st. 3",300,-300.,300.,300,-300.,300.);
-  new TH2F("h1004","Y VS X hit st. 4",300,-300.,300.,300,-300.,300.);
-  new TH2F("h1005","Y VS X hit st. 5",300,-300.,300.,300,-300.,300.);
-  //  Histos variance dans 4      
-  new TH2F("h11","VAR X st. 4",30,3.0,183.0,100,0.,2.);
-  new TH2F("h12","VAR Y st. 4",30,3.0,183.0,100,0.,600.);
-  new TH2F("h13","VAR PHI st. 4",30,3.0,183.0,100,0.,0.0001);
-  new TH2F("h14","VAR ALM st. 4",30,3.0,183.0,100,0.,0.05);
-  new TH1F("h15","P",30,3.0,183.0);
-  new TH1F("h411","VAR X st. 4",100,-1.42,1.42);
-  new TH1F("h412","VAR Y st. 4",100,-25.,25.);
-  new TH1F("h413","VAR PHI st. 4",100,-0.01,0.01);
-  new TH1F("h414","VAR ALM st. 4",100,-0.23,0.23);
-  // histo2
-  new TH2F("h211","histo2-VAR X st. 4",30,3.0,183.0,100,0.,2.);
-  new TH2F("h212","histo2-VAR Y st. 4",30,3.0,183.0,100,0.,600.);
-  new TH1F("h213","histo2-VAR X st. 4",100,-1.42,1.42);
-  new TH1F("h214","histo2-VAR Y st. 4",100,-25.,25.);
-  new TH1F("h215","histo2-P",30,3.0,183.0);
-
-  //  Histos variance dans 2      
-  new TH2F("h21","VAR X st. 2",30,3.0,183.0,100,0.,3.);
-  new TH2F("h22","VAR Y st. 2",30,3.0,183.0,100,0.,7.);
-  new TH2F("h23","VAR PHI st. 2",30,3.0,183.0,100,0.,0.006);
-  new TH2F("h24","VAR ALM st. 2",30,3.0,183.0,100,0.,0.005);
-  new TH1F("h25","P",30,3.0,183.0);
-  new TH1F("h421","VAR X st. 2",100,-1.72,1.72);
-  new TH1F("h422","VAR Y st. 2",100,-2.7,2.7);
-  new TH1F("h423","VAR PHI st. 2",100,-0.08,0.08);
-  new TH1F("h424","VAR ALM st. 2",100,-0.072,0.072);
-  // histo2
-  new TH2F("h221","histo2-VAR X st. 2",30,3.0,183.0,100,0.,3.);
-  new TH2F("h222","histo2-VAR Y st. 2",30,3.0,183.0,100,0.,7.);
-  new TH1F("h223","histo2-VAR X st. 2",100,-1.72,1.72);
-  new TH1F("h224","histo2-VAR Y st. 2",100,-2.7,2.7);
-  new TH1F("h225","histo2-P",30,3.0,183.0);
-
-  //  Histos variance dans 1      
-  new TH2F("h31","VAR X st. 1",30,3.0,183.0,100,0.,2.);
-  new TH2F("h32","VAR Y st. 1",30,3.0,183.0,100,0.,0.5);
-  new TH2F("h33","VAR PHI st. 1",30,3.0,183.0,100,0.,0.006);
-  new TH2F("h34","VAR ALM st. 1",30,3.0,183.0,100,0.,0.005);
-  new TH1F("h35","P",30,3.0,183.0);
-  new TH1F("h431","VAR X st. 1",100,-1.42,1.42);
-  new TH1F("h432","VAR Y st. 1",100,-0.72,0.72);
-  new TH1F("h433","VAR PHI st. 1",100,-0.08,0.08);
-  new TH1F("h434","VAR ALM st. 1",100,-0.072,0.072);
-  //  Histos variance dans 1      
-  new TH2F("h41","VAR X st. 1 fit 5,4,3,2,V",30,3.0,183.0,100,0.,4.);
-  new TH2F("h42","VAR Y st. 1 fit 5,4,3,2,V",30,3.0,183.0,100,0.,20.);
-  new TH2F("h43","VAR PHI st. 1 fit 5,4,3,2,V",30,3.0,183.0,100,0.,0.005);
-  new TH2F("h44","VAR ALM st. 1 fit 5,4,3,2,V",30,3.0,183.0,100,0.,0.005);
-  new TH1F("h45","P",30,3.0,183.0);
-  new TH1F("h441","VAR X st. 1 fit 5,4,3,2,V",100,-2.,2.);
-  new TH1F("h442","VAR Y st. 1 fit 5,4,3,2,V",100,-4.5,4.5);
-  new TH1F("h443","VAR PHI st. 1 fit 5,4,3,2,V",100,-0.072,0.072);
-  new TH1F("h444","VAR ALM st. 1 fit 5,4,3,2,V",100,-0.072,0.072);
-  // histo2
-  new TH2F("h241","histo2-VAR X st. 1 fit 5,4,3,2,V",30,3.0,183.0,100,0.,4.);
-  new TH2F("h242","histo2-VAR Y st. 1 fit 5,4,3,2,V",30,3.0,183.0,100,0.,20.);
-  new TH1F("h243","histo2-VAR X st. 1 fit 5,4,3,2,V",100,-2.,2.);
-  new TH1F("h244","histo2-VAR Y st. 1 fit 5,4,3,2,V",100,-4.5,4.5);
-  new TH1F("h245","histo2-P",30,3.0,183.0);
-
-  //  Histos variance dans 2      
-  new TH2F("h51","VAR X st. 2 fit 5,4,3,1,V",30,3.0,183.0,100,0.,0.5);
-  new TH2F("h52","VAR Y st. 2 fit 5,4,3,1,V",30,3.0,183.0,100,0.,2.);
-  new TH2F("h53","VAR PHI st. 2 fit 5,4,3,1,V",30,3.0,183.0,100,0.,0.005);
-  new TH2F("h54","VAR ALM st. 2 fit 5,4,3,1,V",30,3.0,183.0,100,0.,0.01);
-  new TH1F("h55","P",30,3.0,183.0);
-  new TH1F("h451","VAR X st. 2 fit 5,4,3,1,V",100,-0.72,0.72);
-  new TH1F("h452","VAR Y st. 2 fit 5,4,3,1,V",100,-1.42,1.42);
-  new TH1F("h453","VAR PHI st. 2 fit 5,4,3,1,V",100,-0.072,0.072);
-  new TH1F("h454","VAR ALM st. 2 fit 5,4,3,1,V",100,-0.1,0.1);
-  new TH1F("h999","PTOT",30,3.0,183.0);
-  // histo2
-  new TH2F("h251","histo2-VAR X st. 2 fit 5,4,3,1,V",30,3.0,183.0,100,0.,0.5);
-  new TH2F("h252","histo2-VAR Y st. 2 fit 5,4,3,1,V",30,3.0,183.0,100,0.,2.);
-  new TH1F("h253","histo2-VAR X st. 2 fit 5,4,3,1,V",100,-0.72,0.72);
-  new TH1F("h254","histo2-VAR Y st. 2 fit 5,4,3,1,V",100,-1.42,1.42);
-  new TH1F("h255","histo2-P",30,3.0,183.0);
-  //  Histos variance dans 3      
-  new TH2F("h61","VAR X st. 3 fit 4,5,V",30,3.0,183.0,100,0.,5.);
-  new TH2F("h62","VAR Y st. 3 fit 4,5,V",30,3.0,183.0,100,0.,2.);
-  new TH2F("h63","VAR PHI st. 3 fit 4,5,V",30,3.0,183.0,100,0.,0.0006);
-  new TH2F("h64","VAR ALM st. 3 fit 4,5,V",30,3.0,183.0,100,0.,0.0006);
-  new TH1F("h65","P",30,3.0,183.0);
-  new TH1F("h461","VAR X st. 3 fit 4,5,V",100,-2.25,2.25);
-  new TH1F("h462","VAR Y st. 3 fit 4,5,V",100,-1.42,1.42);
-  new TH1F("h463","VAR PHI st. 3 fit 4,5,V",100,-0.024,0.024);
-  new TH1F("h464","VAR ALM st. 3 fit 4,5,V",100,-0.024,0.024);
-  // histo2
-  new TH2F("h261","histo2-VAR X st. 3 fit 4,5,V",30,3.0,183.0,100,0.,5.);
-  new TH2F("h262","histo2-VAR Y st. 3 fit 4,5,V",30,3.0,183.0,100,0.,2.);
-  new TH1F("h263","histo2-VAR X st. 3 fit 4,5,V",100,-2.25,2.25);
-  new TH1F("h264","histo2-VAR Y st. 3 fit 4,5,V",100,-1.42,1.42);
-  new TH1F("h265","Phisto2-",30,3.0,183.0);
-  // Histos dx,dy distribution between chambers inside stations
-  new TH1F("h71","DX in st. ID-70",100,-5.,5.);
-  new TH1F("h81","DY in st. ID-80",100,-5.,5.);
-  new TH1F("h72","DX in st. ID-70",100,-5.,5.);
-  new TH1F("h82","DY in st. ID-80",100,-5.,5.);
-  new TH1F("h73","DX in st. ID-70",100,-5.,5.);
-  new TH1F("h83","DY in st. ID-80",100,-5.,5.);
-  new TH1F("h74","DX in st. ID-70",100,-5.,5.);
-  new TH1F("h84","DY in st. ID-80",100,-5.,5.);
-  new TH1F("h75","DX in st. ID-70",100,-5.,5.);
-  new TH1F("h85","DY in st. ID-80",100,-5.,5.);
+  /// Add the vertex as a measured hit to constrain the fit of the "trackCandidate"
+  /// Compute the vertex resolution from natural vertex dispersion and
+  /// multiple scattering effets according to trackCandidate path in absorber
+  /// It is necessary to account for multiple scattering effects here instead of during the fit of
+  /// the "trackCandidate" to do not influence the result by changing track resolution at vertex
+  AliDebug(1,"Enter SetVertexForFit");
+  
+  Double_t nonBendingReso2 = fgkNonBendingVertexDispersion * fgkNonBendingVertexDispersion;
+  Double_t bendingReso2 = fgkBendingVertexDispersion * fgkBendingVertexDispersion;
+  // add multiple scattering effets
+  AliMUONTrackParam paramAtVertex(*((AliMUONTrackParam*)(trackCandidate.GetTrackParamAtHit()->First())));
+  paramAtVertex.DeleteCovariances(); // to be sure to account only for multiple scattering
+  AliMUONTrackExtrap::ExtrapToVertexUncorrected(&paramAtVertex,0.);
+  const TMatrixD& kParamCov = paramAtVertex.GetCovariances();
+  nonBendingReso2 += kParamCov(0,0);
+  bendingReso2 += kParamCov(2,2);
+  // Set the vertex
+  AliMUONHitForRec vertex; // Coordinates set to (0.,0.,0.) by default
+  vertex.SetNonBendingReso2(nonBendingReso2);
+  vertex.SetBendingReso2(bendingReso2);
+  trackCandidate.SetVertex(&vertex);
 }
 
-//_____________________________________________________________________________
-void chfnt(Int_t &ievr, Int_t &ntrackr, Int_t *istatr, Int_t *isignr, Float_t *pxr, Float_t *pyr, Float_t *pzr, Float_t *zvr, Float_t *chi2r,  Float_t *pxv, Float_t *pyv, Float_t *pzv)
+  //__________________________________________________________________________
+void AliMUONTrackReconstructor::Fit(AliMUONTrack &track, Bool_t includeMCS, Bool_t calcCov)
 {
-  //
-  // fill the ntuple 
-    NtupleSt.ievr = ievr;
-    NtupleSt.ntrackr = ntrackr;
-    for (Int_t i=0; i<500; i++) {
-       NtupleSt.istatr[i] = istatr[i];
-       NtupleSt.isignr[i] = isignr[i]; 
-       NtupleSt.pxr[i]    = pxr[i]; 
-       NtupleSt.pyr[i]    = pyr[i];
-       NtupleSt.pzr[i]    = pzr[i];
-       NtupleSt.zvr[i]    = zvr[i];
-       NtupleSt.chi2r[i]  = chi2r[i];
-       NtupleSt.pxv[i]    = pxv[i]; 
-       NtupleSt.pyv[i]    = pyv[i];
-       NtupleSt.pzv[i]    = pzv[i];
+  /// Fit the track "track" w/wo multiple Coulomb scattering according to "includeMCS".
+  
+  Double_t benC, errorParam, invBenP, nonBenC, x, y;
+  AliMUONTrackParam *trackParam;
+  Double_t arg[1], fedm, errdef, fitFMin;
+  Int_t npari, nparx;
+  Int_t status, covStatus;
+  
+  // Instantiate gMinuit if not already done
+  if (!gMinuit) gMinuit = new TMinuit(6);
+  // Clear MINUIT parameters
+  gMinuit->mncler();
+  // Give the fitted track to MINUIT
+  gMinuit->SetObjectFit(&track);
+  if ((AliLog::GetDebugLevel("MUON","AliMUONTrackReconstructor") >= 2) || (AliLog::GetGlobalDebugLevel() >= 2)) {
+    // Define print level
+    arg[0] = 1;
+    gMinuit->mnexcm("SET PRI", arg, 1, status);
+    // Print covariance matrix
+    gMinuit->mnexcm("SHO COV", arg, 0, status);
+  } else {
+    arg[0] = -1;
+    gMinuit->mnexcm("SET PRI", arg, 1, status);
+  }
+  // No warnings
+  gMinuit->mnexcm("SET NOW", arg, 0, status);
+  // Define strategy
+  //arg[0] = 2;
+  //gMinuit->mnexcm("SET STR", arg, 1, status);
+  
+  // set flag w/wo multiple scattering according to "includeMCS"
+  track.SetFitWithMCS(includeMCS);
+  if (includeMCS) {
+    // compute hit weights only once
+    if (!track.ComputeHitWeights()) {
+      AliWarning("cannot take into account the multiple scattering effects");
+      track.SetFitWithMCS(kFALSE);
     }
-    gAliNtupleGlobal->Fill();   
-}
-
-//________________
-void hist_closed()
-{
-  //
-  // write histos and ntuple to "reconst.root" file
-  gAliFileGlobal->Write();
+  }
+  
+  // Set fitting function
+  gMinuit->SetFCN(TrackChi2);
+  
+  // Set fitted parameters (!! The order is very important for the covariance matrix !!)
+  trackParam = (AliMUONTrackParam*) (track.GetTrackParamAtHit()->First());
+  // could be tried with no limits for the search (min=max=0) ????
+  // mandatory limits in non Bending to avoid NaN values of parameters
+  gMinuit->mnparm(0, "X", trackParam->GetNonBendingCoor(), 0.03, -500.0, 500.0, status);
+  gMinuit->mnparm(1, "NonBenS", trackParam->GetNonBendingSlope(), 0.001, -0.5, 0.5, status);
+  // mandatory limits in Bending to avoid NaN values of parameters
+  gMinuit->mnparm(2, "Y", trackParam->GetBendingCoor(), 0.10, -500.0, 500.0, status);
+  gMinuit->mnparm(3, "BenS", trackParam->GetBendingSlope(), 0.001, -0.5, 0.5, status);
+  gMinuit->mnparm(4, "InvBenP", trackParam->GetInverseBendingMomentum(), 0.003, -0.4, 0.4, status);
+  
+  // minimization
+  gMinuit->mnexcm("MIGRAD", arg, 0, status);
+  
+  // Calculate the covariance matrix more accurately if required
+  if (calcCov) gMinuit->mnexcm("HESSE", arg, 0, status);
+   
+  // get results into "invBenP", "benC", "nonBenC" ("x", "y")
+  gMinuit->GetParameter(0, x, errorParam);
+  trackParam->SetNonBendingCoor(x);
+  gMinuit->GetParameter(1, nonBenC, errorParam);
+  trackParam->SetNonBendingSlope(nonBenC);
+  gMinuit->GetParameter(2, y, errorParam);
+  trackParam->SetBendingCoor(y);
+  gMinuit->GetParameter(3, benC, errorParam);
+  trackParam->SetBendingSlope(benC);
+  gMinuit->GetParameter(4, invBenP, errorParam);
+  trackParam->SetInverseBendingMomentum(invBenP);
+  
+  // global result of the fit
+  gMinuit->mnstat(fitFMin, fedm, errdef, npari, nparx, covStatus);
+  track.SetFitFMin(fitFMin);
+  
+  // Get the covariance matrix if required
+  if (calcCov) {
+    // Covariance matrix according to HESSE status
+    // If problem then keep only the diagonal terms (variances)
+    Double_t matrix[5][5];
+    gMinuit->mnemat(&matrix[0][0],5);
+    if (covStatus == 3) trackParam->SetCovariances(matrix);
+    else trackParam->SetVariances(matrix);
+  } else trackParam->DeleteCovariances();
+  
 }
 
-//________________________________________________________________________
-void trackf_read_fit(Int_t &ievr, Int_t &nev, Int_t &nhittot1, Int_t *izch, Double_t *xgeant, Double_t *ygeant) 
+  //__________________________________________________________________________
+void TrackChi2(Int_t & /*nParam*/, Double_t * /*gradient*/, Double_t &chi2, Double_t *param, Int_t /*flag*/)
 {
-
-  // introduce aliroot variables in fortran common 
-  // tracking study from geant hits 
-  //
-
-  AliMUON *pMUON  = (AliMUON*) gAlice->GetModule("MUON");
-  TTree *treeH = gAlice->TreeH();
-  Int_t ntracks = (Int_t)treeH->GetEntries();
-  cout<<"ntrack="<<ntracks<<endl;
-
-  nhittot1 = 0;
-
-//  Loop over tracks
-  for (Int_t track=0; track<ntracks;track++) {
-      gAlice->ResetHits();
-      treeH->GetEvent(track);
-      
-      if (pMUON)  {
-
-//  Loop over hits
-         for(AliMUONHit* mHit=(AliMUONHit*)pMUON->FirstHit(-1); 
-             mHit;
-             mHit=(AliMUONHit*)pMUON->NextHit()) 
-         {
-             if (mHit->Chamber() > 10) continue;
-             Int_t ftrack = mHit->Track();
-             Int_t id = gAlice->Particle(ftrack)->GetPdgCode();
-             
-             if (id==kMuonPlus||id==kMuonMinus) {
-                 xgeant[nhittot1]   = mHit->Y();
-                 ygeant[nhittot1]   = mHit->X();
-                 izch[nhittot1]     = mHit->Chamber();
-//               printf("id %d ch %d x %f y %f\n",id,izch[nhittot1],xgeant[nhittot1],ygeant[nhittot1]);  
-                 nhittot1++;
-             }
-         } // hit loop
-      } // if pMUON
-  } // track loop
-
-  ievr=nev;
-  gAliFileGlobal->cd();    
+  /// Return the "Chi2" to be minimized with Minuit for track fitting.
+  /// Assumes that the track hits are sorted according to increasing Z.
+  /// Track parameters at each TrackHit are updated accordingly.
+  /// Vertex is used according to the flag "trackBeingFitted->GetFitWithVertex()".
+  /// Multiple Coulomb scattering is taken into account according to the flag "trackBeingFitted->GetFitWithMCS()".
+  
+  AliMUONTrack *trackBeingFitted = (AliMUONTrack*) gMinuit->GetObjectFit();
+  AliMUONTrackParam* trackParamAtHit = (AliMUONTrackParam*) trackBeingFitted->GetTrackParamAtHit()->First();
+  Double_t dX, dY;
+  chi2 = 0.; // initialize chi2
+  
+  // update track parameters
+  trackParamAtHit->SetNonBendingCoor(param[0]);
+  trackParamAtHit->SetNonBendingSlope(param[1]);
+  trackParamAtHit->SetBendingCoor(param[2]);
+  trackParamAtHit->SetBendingSlope(param[3]);
+  trackParamAtHit->SetInverseBendingMomentum(param[4]);
+  trackBeingFitted->UpdateTrackParamAtHit();
+  
+  // Take the vertex into account in the fit if required
+  if (trackBeingFitted->GetFitWithVertex()) {
+    AliMUONTrackParam paramAtVertex(*trackParamAtHit);
+    AliMUONTrackExtrap::ExtrapToZ(&paramAtVertex, 0.);
+    AliMUONHitForRec *vertex = trackBeingFitted->GetVertex();
+    if (!vertex) {
+      cout<<"Error in TrackChi2: Want to use the vertex in tracking but it has not been created!!"<<endl;
+      exit(-1);
+    }
+    dX = vertex->GetNonBendingCoor() - paramAtVertex.GetNonBendingCoor();
+    dY = vertex->GetBendingCoor() - paramAtVertex.GetBendingCoor();
+    chi2 += dX * dX / vertex->GetNonBendingReso2() + dY * dY / vertex->GetBendingReso2();
+  }
+  
+  // compute chi2 w/wo multiple scattering
+  if (trackBeingFitted->GetFitWithMCS()) chi2 += trackBeingFitted->ComputeGlobalChi2(kTRUE);
+  else chi2 += trackBeingFitted->ComputeGlobalChi2(kFALSE);
+  
 }
 
-//______________________________________________________________________________
-void trackf_read_geant(Int_t *itypg, Double_t *xtrg, Double_t *ytrg, Double_t *ptotg, Int_t *idg, Int_t *izch, Double_t *pvert1g, Double_t *pvert2g, Double_t *pvert3g, Double_t *zvertg, Int_t &nhittot1, Double_t *cx, Double_t *cy, Double_t *cz, Int_t &ievr,Int_t &nev,Double_t *xgeant, Double_t *ygeant, Double_t *clsize1, Double_t *clsize2) 
+  //__________________________________________________________________________
+void AliMUONTrackReconstructor::ImproveTracks()
 {
-  //
-  // introduce aliroot variables in fortran common 
-  // tracking study from geant hits 
-  //
-
-  AliMUON *pMUON  = (AliMUON*) gAlice->GetModule("MUON");
+  /// Improve tracks by removing clusters with local chi2 highter than the defined cut
+  /// Recompute track parameters and covariances at the remaining clusters
+  AliDebug(1,"Enter ImproveTracks");
   
-  //  TTree *treeK = gAlice->TreeK();
-  TTree *treeH = gAlice->TreeH();
-  Int_t ntracks = (Int_t)treeH->GetEntries();
-  cout<<"ntrack="<<ntracks<<endl;
-
-  Int_t maxidg = 0;
-  Int_t nres=0;
+  Double_t localChi2, worstLocalChi2;
+  Int_t worstChamber;
+  AliMUONTrackParam *trackParamAtHit, *worstTrackParamAtHit;
   
-//
-//  Loop over tracks
-//
-
-  for (Int_t track=0; track<ntracks;track++) {
-      gAlice->ResetHits();
-      treeH->GetEvent(track);
+  // Remove double track to improve only "good" tracks
+  RemoveDoubleTracks();
+  
+  AliMUONTrack *track = (AliMUONTrack*) fRecTracksPtr->First();
+  while (track) {
+    
+    while (!track->IsImproved()) {
       
-      if (pMUON)  {
-//
-//  Loop over hits
-//
-         for(AliMUONHit* mHit=(AliMUONHit*)pMUON->FirstHit(-1); 
-             mHit;
-             mHit=(AliMUONHit*)pMUON->NextHit()) 
-         {
-             if (maxidg<=20000) {
-               
-               if (mHit->Chamber() > 10) continue;
-               TParticle *particle;
-               Int_t ftrack = mHit->Track();
-               Int_t id = gAlice->Particle(ftrack)->GetPdgCode();
-
-//             if (id==kMuonPlus||id==kMuonMinus) {
-                   
-                   // inversion de x et y car le champ est inverse dans le programme tracking
-                   xtrg[maxidg]   = 0;       
-                   ytrg[maxidg]   = 0;       
-                   xgeant[maxidg]   = mHit->Y();             // x-pos of hit
-                   ygeant[maxidg]   = mHit->X();             // y-pos of hit
-                   clsize1[maxidg]   = 0;     // cluster size on 1-st cathode
-                   clsize2[maxidg]   = 0;     // cluster size on 2-nd cathode
-                   cx[maxidg]     = mHit->Cy();              // Px/P of hit
-                   cy[maxidg]     = mHit->Cx();              // Py/P of hit
-                   cz[maxidg]     = mHit->Cz();              // Pz/P of hit
-                   izch[maxidg]   = mHit->Chamber();         
-                   /*      
-                   Int_t pdgtype  = Int_t(mHit->fParticle); // particle number
-                   itypg[maxidg]  = gMC->IdFromPDG(pdgtype);
-                   */
-                   itypg[maxidg] = 0;
-                    if (id==kMuonPlus) itypg[maxidg]  = 5;
-                   if (id==kMuonMinus) itypg[maxidg]  = 6;
-
-                    //printf("ich, itypg[maxidg] %d %d\n",izch[maxidg],itypg[maxidg]);
-
-                   ptotg[maxidg]  = mHit->Momentum();          // P of hit 
-                   
-                   particle = gAlice->Particle(ftrack);
-                   Float_t thet = particle->Theta();
-                   thet = thet*180./3.1416;
-                   
-                   //cout<<"chambre "<<izch[maxidg]<<"  ptot="<<ptotg[maxidg]<<"   theta="<<thet<<"   phi="<<mHit->fPhi<<" z="<<zz<<endl;          
-                   
-                   Int_t iparent = particle->GetFirstMother();
-                   if (iparent >= 0) {
-                       Int_t ip;
-                       while(1) {
-                           ip=gAlice->Particle(iparent)->GetFirstMother();
-                           if (ip < 0) {
-                               break;
-                           } else {
-                               iparent = ip;
-                           }
-                       }
-                   }
-                   //printf("iparent - %d\n",iparent);
-                   Int_t id1  = ftrack; // numero de la particule generee au vertex
-                   Int_t idum = track+1;
-                   Int_t id2 = gAlice->Particle(iparent)->GetPdgCode();
-
-                   if (id2==443) id2=114;
-                   else id2=116;
-                   
-                    if (id2==116) {
-                     nres++;
-                   }
-                   //printf("id2 %d\n",id2);
-                   idg[maxidg] = 30000*id1+10000*idum+id2;
-                   
-                   pvert1g[maxidg] = particle->Py();      // Px vertex
-                   pvert2g[maxidg] = particle->Px();      // Py vertex  
-                   pvert3g[maxidg] = particle->Pz();      // Pz vertex
-                   zvertg[maxidg]  = particle->Vz();      // z vertex 
-           
-                   //      cout<<"x="<<xgeant[maxidg]<<endl;
-                   //cout<<"y="<<ygeant[maxidg]<<endl;
-                   //cout<<"typ="<<itypg[maxidg]<<endl;
-
-                   maxidg ++;
-
-               }
-             }
-         } // hit loop
-//      } // if pMUON
-  } // track loop first file
-
-  if (gAliTrH1 && gAliHits2 ) { // if background file
-    ntracks =(Int_t)gAliTrH1->GetEntries();
-    printf("Trackf_read - 2-nd file - ntracks %d\n",ntracks);
-
-    //  Loop over tracks
-    for (Int_t track=0; track<ntracks; track++) {
+      // Update track parameters and covariances
+      track->UpdateCovTrackParamAtHit();
       
-      if (gAliHits2) gAliHits2->Clear();
-      gAliTrH1->GetEvent(track);
-
-      //  Loop over hits
-      AliMUONHit *mHit;
-      for (int i=0;i<gAliHits2->GetEntriesFast();i++) 
-       {
-         mHit=(AliMUONHit*) (*gAliHits2)[i];
-         if (mHit->Chamber() > 10) continue;
-         if (maxidg<=20000) {
-           
-           // inversion de x et y car le champ est inverse dans le programme tracking !!!!
-           xtrg[maxidg]   = 0;                    // only for reconstructed point
-           ytrg[maxidg]   = 0;                    // only for reconstructed point
-           xgeant[maxidg]   = mHit->Y();           // x-pos of hit
-           ygeant[maxidg]   = mHit->X();           // y-pos of hit
-           clsize1[maxidg]   = 0;           // cluster size on 1-st cathode
-           clsize2[maxidg]   = 0;           // cluster size on 2-nd cathode
-           cx[maxidg]     = mHit->Cy();            // Px/P of hit
-           cy[maxidg]     = mHit->Cx();            // Py/P of hit
-           cz[maxidg]     = mHit->Cz();            // Pz/P of hit
-           izch[maxidg]   = mHit->Chamber();       // chamber number
-           ptotg[maxidg]  = mHit->Momentum();      // P of hit 
-           
-           Int_t ftrack = mHit->Track();
-           Int_t id1  = ftrack;                   // track number 
-           Int_t idum = track+1;
-           
-           TClonesArray *fPartArray = gAliParticles2;
-//         TParticle *Part=NULL;
-           Int_t id = ((TParticle*) fPartArray->UncheckedAt(ftrack))->GetPdgCode();
-           if (id==kMuonPlus||id==kMuonMinus) {
-               if (id==kMuonPlus) itypg[maxidg]  = 5;
-               else  itypg[maxidg]  = 6;
-           } else itypg[maxidg]=0;
-           
-           Int_t id2=0; // set parent to 0 for background !!
-           idg[maxidg] = 30000*id1+10000*idum+id2;
-           
-
-           pvert1g[maxidg] = 0;      // Px vertex
-           pvert2g[maxidg] = 0;      // Py vertex  
-           pvert3g[maxidg] = 0;      // Pz vertex
-           zvertg[maxidg]  = 0;      // z vertex 
-           maxidg ++;
-
-         } // check limits (maxidg)
-       } // hit loop 
-    } // track loop
-  } // if gAliTrH1
-
-  ievr = nev;
-  nhittot1 = maxidg ;
-  cout<<"nhittot1="<<nhittot1<<endl;
-
-  static Int_t nbres=0;
-  if (nres>=19) nbres++;
-  printf("nres, nbres %d %d \n",nres,nbres);
-
-  gAliFileGlobal->cd();      
-
+      // Compute local chi2 of each hits
+      track->ComputeLocalChi2(kTRUE);
+      
+      // Look for the hit to remove
+      worstTrackParamAtHit = 0;
+      worstLocalChi2 = 0.;
+      trackParamAtHit = (AliMUONTrackParam*) track->GetTrackParamAtHit()->First();
+      while (trackParamAtHit) {
+        
+        // Pick up hit with the worst chi2
+        localChi2 = trackParamAtHit->GetLocalChi2();
+        if (localChi2 > worstLocalChi2) {
+          worstLocalChi2 = localChi2;
+          worstTrackParamAtHit = trackParamAtHit;
+        }
+        
+      trackParamAtHit = (AliMUONTrackParam*) track->GetTrackParamAtHit()->After(trackParamAtHit);
+      }
+      
+      // Check if bad hit found
+      if (!worstTrackParamAtHit) {
+        track->SetImproved(kTRUE);
+        break;
+      }
+      
+      // check whether the worst hit is removable or not
+      if (!worstTrackParamAtHit->IsRemovable()) {
+        track->SetImproved(kTRUE);
+        break;
+      }
+      
+      // Check whether the worst chi2 is under requirement or not
+      if (worstLocalChi2 < 2. * fgkSigmaToCutForImprovement * fgkSigmaToCutForImprovement) { // 2 because 2 quantities in chi2
+        track->SetImproved(kTRUE);
+        break;
+      }
+      
+      // Reset the second hit in the same station as the bad one as being NOT removable
+      worstChamber = worstTrackParamAtHit->GetHitForRecPtr()->GetChamberNumber();
+      if (worstChamber%2 == 0) ((AliMUONTrackParam*)track->GetTrackParamAtHit()->After(worstTrackParamAtHit))->SetRemovable(kFALSE);
+      else ((AliMUONTrackParam*)track->GetTrackParamAtHit()->Before(worstTrackParamAtHit))->SetRemovable(kFALSE);
+      
+      // Remove the worst hit
+      track->RemoveTrackParamAtHit(worstTrackParamAtHit);
+      
+      // Re-fit the track:
+      // Take into account the multiple scattering
+      // Calculate the track parameter covariance matrix
+      track->SetFitWithVertex(kFALSE); // To be sure
+      Fit(*track, kTRUE, kTRUE);
+      
+      // Printout for debuging
+      if ((AliLog::GetDebugLevel("MUON","AliMUONTrackReconstructor") >= 1) || (AliLog::GetGlobalDebugLevel() >= 1)) {
+        cout << "ImproveTracks: track " << fRecTracksPtr->IndexOf(track)+1 << " improved " << endl;
+      }
+      
+    }
+    
+    track = (AliMUONTrack*) fRecTracksPtr->After(track);
+  }
+  
 }
 
-//________________________________________________________________________
-void trackf_read_spoint(Int_t *itypg, Double_t *xtrg, Double_t *ytrg, Double_t *ptotg, Int_t *idg, Int_t *izch, Double_t *pvert1g, Double_t *pvert2g, Double_t *pvert3g, Double_t *zvertg, Int_t &nhittot1, Double_t *cx, Double_t *cy, Double_t *cz, Int_t &ievr,Int_t &nev,Double_t *xgeant, Double_t *ygeant,Double_t *clsize1, Double_t *clsize2) 
-
+  //__________________________________________________________________________
+void AliMUONTrackReconstructor::Finalize()
 {
-    //
-    // introduce aliroot variables in fortran common 
-    // tracking study from reconstructed points 
-    //
-    AliMUON *pMUON  = (AliMUON*) gAlice->GetModule("MUON");
+  /// Fill AliMUONTrack's fHitForRecAtHit array
+  /// Recompute track parameters and covariances at each attached cluster from those at the first one
+  AliMUONTrack *track;
+  AliMUONTrackParam *trackParamAtHit;
+  
+  track = (AliMUONTrack*) fRecTracksPtr->First();
+  while (track) {
     
-    cout<<"numero de l'evenement "<<nev<<endl;
+    // update track parameters if not already done
+    if (!track->IsImproved()) track->UpdateCovTrackParamAtHit();
     
-    TTree *treeR = gAlice->TreeR();
-    Int_t nent=(Int_t)treeR->GetEntries();
-    if (nev < 10) 
-       printf("Found %d entries in the tree (must be one per cathode per event! + 1empty)\n",
-              nent);
-//
+    trackParamAtHit = (AliMUONTrackParam*) (track->GetTrackParamAtHit()->First());
+    while (trackParamAtHit) {
+      
+      // update array of track hit
+      track->AddHitForRecAtHit(trackParamAtHit->GetHitForRecPtr());
+      
+      trackParamAtHit = (AliMUONTrackParam*) (track->GetTrackParamAtHit()->After(trackParamAtHit));
+    }
     
-    Int_t mult1, mult2;
+    track = (AliMUONTrack*) fRecTracksPtr->After(track);
+    
+  }
     
-    if (pMUON) {
-       Int_t mpoi=0;
-       for (Int_t ich=0;ich<10;ich++) {
-           printf("chambre %d\n",ich+1);
-           TClonesArray *reconstPoints  = pMUON->RawClustAddress(ich);
-
-           pMUON->ResetRawClusters();
-           treeR->GetEvent(nent-1);
-           Int_t npoints = (Int_t) reconstPoints->GetEntries();
-           if (!npoints) continue;
-           printf("\n ch %d npoints = %d\n",ich+1,npoints);
-           //  Loop over reconstruted points
-           for (Int_t ipoi=0; ipoi<npoints; ipoi++) {
-               printf("  point %d\n",ipoi);
-               AliMUONRawCluster* point = 
-                   (AliMUONRawCluster*) reconstPoints->UncheckedAt(ipoi);
-               
-               mult1=point->fMultiplicity[0];
-               mult2=point->fMultiplicity[1];        
-               xtrg[mpoi]=(Double_t) point->fY[0];
-               ytrg[mpoi]=(Double_t) point->fX[0];
-               izch[mpoi]=ich+1;
-               Int_t itrack  = point->fTracks[1];
-               Int_t ihit    = point->fTracks[0];
-               xgeant[mpoi] = 0;
-               ygeant[mpoi] = 0;
-               clsize1[mpoi] = mult1;
-               clsize2[mpoi] = mult2;
-               Int_t id1, id2, idum;
-               id1=id2=idum=-1;
-               itypg[mpoi]=0;
-               ihit = ihit-1;
-               if (ihit >=0 && itrack >=0) {
-                   gAlice->ResetHits();
-                   gAlice->TreeH()->GetEvent(itrack);
-                   TClonesArray *pMUONhits  = pMUON->Hits();
-                   AliMUONHit* mHit;
-                   mHit=(AliMUONHit*) (pMUONhits->UncheckedAt(ihit));
-                   Int_t id = (Int_t) mHit->Particle();
-                   xgeant[mpoi] = mHit->Y();          
-                   ygeant[mpoi] = mHit->X(); 
-                   if (id == kMuonPlus)  itypg[mpoi]=5;
-                   if (id == kMuonMinus) itypg[mpoi]=6;
-                   TParticle *particle;
-                   particle = gAlice->Particle(mHit->Track());
-                   TParticle* particleM=gAlice->Particle(particle->GetFirstMother());
-                   Int_t iparent=particleM->GetPdgCode();
-                   printf("\n Particle Id:%d %d \n", id, iparent);
-                   if (iparent == 443) id2=114;
-                   if (iparent == 553) id2=116;
-               }
-               id1=itrack;
-               idum=itrack+1;
-               idg[mpoi] = 30000*id1+10000*idum+id2;
-               mpoi++;
-           } // loop over points
-       } // loop over chamber
-       ievr = nev;
-       cout<<"evenement "<<ievr<<endl;
-       nhittot1 = mpoi;
-       cout<<"nhittot1="<<nhittot1<<endl;
-       
-       treeR->Reset();
-
-       gAliFileGlobal->cd();
-
-    } // if pMUON
-}
-
-//____________________________________________________________________________
-void trackf_fit(Int_t &ivertex, Double_t *pest, Double_t *pstep, Double_t &pxzinv, Double_t &tphi, Double_t &talam, Double_t &xvert, Double_t &yvert)
-{
-  //
-  //  Fit a track candidate with the following input parameters: 
-  //  INPUT :  IVERTEX  : vertex flag, if IVERTEX=1 (XVERT,YVERT) are free paramaters
-  //                                   if IVERTEX=1 (XVERT,YVERT)=(0.,0.) 
-  //           PEST(5)  : starting value of parameters (minuit)
-  //           PSTEP(5) : step size for parameters (minuit)
-  //  OUTPUT : PXZINV,TPHI,TALAM,XVERT,YVERT : fitted value of the parameters
-
-  static Double_t arglist[10];
-  static Double_t c[5] = {0.4, 0.45, 0.45, 90., 90.};
-  static Double_t b1, b2, epxz, efi, exs, exvert, eyvert;
-  TString chname;
-  Int_t ierflg = 0;
-  
-  TMinuit *gMinuit = new TMinuit(5);
-  gMinuit->mninit(5,10,7);
-  gMinuit->SetFCN(fcnf);  // constant m.f.
-
-  arglist[0] = -1;
-  
-  gMinuit->mnexcm("SET PRINT", arglist, 1, ierflg);
-  //      gMinuit->mnseti('track fitting');
-  
-  gMinuit->mnparm(0, "invmom",  pest[0], pstep[0], -c[0], c[0], ierflg);
-  gMinuit->mnparm(1, "azimuth", pest[1], pstep[1], -c[1], c[1], ierflg);
-  gMinuit->mnparm(2, "deep",    pest[2], pstep[2], -c[2], c[2], ierflg);
-  if (ivertex==1) {
-    gMinuit->mnparm(3, "x ", pest[3], pstep[3], -c[3], c[3], ierflg);
-    gMinuit->mnparm(4, "y ", pest[4], pstep[4], -c[4], c[4], ierflg);  
-  }   
-  
-  gMinuit->mnexcm("SET NOGR", arglist, 0, ierflg);
-  gMinuit->mnexcm("MINIMIZE", arglist, 0, ierflg);
-  gMinuit->mnexcm("EXIT" , arglist, 0, ierflg);
-  
-  gMinuit->mnpout(0, chname, pxzinv, epxz, b1, b2, ierflg);
-  gMinuit->mnpout(1, chname, tphi, efi, b1, b2, ierflg);
-  gMinuit->mnpout(2, chname, talam, exs, b1, b2, ierflg);
-  if (ivertex==1) {
-    gMinuit->mnpout(3, chname, xvert, exvert, b1, b2, ierflg);
-    gMinuit->mnpout(4, chname, yvert, eyvert, b1, b2, ierflg);
-  }   
-  
-  delete gMinuit;
-}
-          
-//________________________________________________________________________________
-void fcnf(Int_t &npar, Double_t *grad, Double_t &fval, Double_t *pest, Int_t iflag)
-{
-  //
-  // function called by trackf_fit
-      Int_t futil = 0;
-      fcn(npar,grad,fval,pest,iflag,futil);
 }
 
-//____________________________________________________________________________
-void prec_fit(Double_t &pxzinv, Double_t &fis, Double_t &alams, Double_t &xvert, Double_t &yvert, Double_t &pxzinvf, Double_t &fif, Double_t &alf, Double_t &xvertf, Double_t &yvertf, Double_t &epxzinv, Double_t &efi, Double_t &exs, Double_t &exvert, Double_t &eyvert)
-{
-  // 
-  // minuit fits for tracking finding 
-                                                                            
-      static Double_t arglist[10];
-      static Double_t c1[5] = {0.001, 0.001, 0.001, 1., 1.};
-      static Double_t c2[5] = {0.5, 0.5, 0.5, 120., 120.};
-      static Double_t emat[9];
-      static Double_t b1, b2;
-      Double_t fmin, fedm, errdef; 
-      Int_t npari, nparx, istat;
-
-      TString chname;
-      Int_t ierflg = 0;
-      
-      TMinuit *gMinuit = new TMinuit(5);
-      gMinuit->mninit(5,10,7);
-      gMinuit->SetFCN(fcnfitf);
-
-      arglist[0] = -1.;
-      gMinuit->mnexcm("SET PRINT", arglist, 1, ierflg);
-      
-      //      gMinuit->mnseti('track fitting');
-
-      gMinuit->mnparm(0,"invmom",   pxzinv, c1[0], -c2[0], c2[0], ierflg); // 0.003, 0.5
-      gMinuit->mnparm(1,"azimuth ", fis,    c1[1], -c2[1], c2[1], ierflg);
-      gMinuit->mnparm(2,"deep    ", alams,  c1[2], -c2[2], c2[2], ierflg);
-      gMinuit->mnparm(3,"xvert",    xvert,  c1[3], -c2[3], c2[3], ierflg);
-      gMinuit->mnparm(4,"yvert",    yvert,  c1[4], -c2[4], c2[4], ierflg);
-
-      gMinuit->mnexcm("SET NOGR", arglist, 0, ierflg);
-      arglist[0] = 2.;
-      gMinuit->mnexcm("MINIMIZE", arglist, 0, ierflg);
-      gMinuit->mnexcm("EXIT", arglist, 0, ierflg);
-      gMinuit->mnpout(0, chname, pxzinvf, epxzinv, b1, b2, ierflg);
-      gMinuit->mnpout(1, chname, fif, efi, b1, b2, ierflg);
-      gMinuit->mnpout(2, chname, alf, exs, b1, b2, ierflg);
-      gMinuit->mnpout(3, chname, xvertf, exvert, b1, b2, ierflg);
-      gMinuit->mnpout(4, chname, yvertf, eyvert, b1, b2, ierflg);
-  
-      gMinuit->mnemat(emat, 3);
-      gMinuit->mnstat(fmin, fedm, errdef, npari, nparx, istat);
 
-     delete gMinuit;
-}
-
-//____________________________________________________________________
-void fcnfitf(Int_t &npar, Double_t *grad, Double_t &fval, Double_t *xval, Int_t iflag)
-{
-  //
-  // function called by prec_fit 
-      Int_t futil = 0;
-      fcnfit(npar,grad,fval,xval,iflag,futil);
-}