]> git.uio.no Git - u/mrichter/AliRoot.git/blobdiff - PWG1/PilotTrain/PilotAnalysis.C
new T0 QA from Alla
[u/mrichter/AliRoot.git] / PWG1 / PilotTrain / PilotAnalysis.C
index d5ddc96dd630c373518ab0a4a90e4215de03e299..1a5ace8dd8d8e91fcce7b93a00f92693fa30323f 100644 (file)
@@ -4,33 +4,86 @@ void AddAnalysisTasks();
 class AliAnalysisAlien;                                                                                                                    
 AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode);
 
-Bool_t doQAsym        = 1;   // output ok
-Bool_t doVZERO        = 1;   // output ok but there is a 2nd file
-Bool_t doVertex       = 1;   // output ok
-Bool_t doSPD          = 1;   // output ok, needs RP   
-Bool_t doFMD          = 1;   // output ok
-Bool_t doTPC          = 1;   // output ok
-Bool_t doEventStat    = 1;   // output ok
-Bool_t doSDD          = 1;   // outout ok needs RP
+// Collision type: 0 = p-p   1 = Pb-Pb
+Int_t  iCollisionType = 0;
+Int_t runNumbers[5] = {145384};
 
-TString     train_name         = "QA001_PASS4";
-TString     job_tag            = "QA001: PWG1 QA train";
-TString     root_version       = "v5-26-00b";
-TString     aliroot_version    = "v4-19-04-AN";
-TString     grid_datadir       = "/alice/data/2009/LHC09d";
-TString     data_pattern       = "*ESDs/pass4/*ESDs.root";
-//TString     alien_outdir       = "";
-TString     alien_outdir       = "/alice/data/2009/LHC09d/analysis/QA001_PASS4";
+Bool_t doCDBconnect   = 1;
+Bool_t doEventStat    = 1;
+Bool_t doCentrality   = 0;
+Bool_t doQAsym        = 1;
+Bool_t doVZERO        = 1;   // there is a 2nd file
+Bool_t doVertex       = 1;
+Bool_t doSPD          = 1;   // needs RP   
+Bool_t doTPC          = 1;
+Bool_t doSDD          = 1;   // needs RP
+Bool_t doSSDdEdx      = 1;
+
+Bool_t doTRD          = 0;
+Bool_t doITS          = 1;
+Bool_t doITSsaTracks  = 1;   // new
+Bool_t doITSalign     = 0;   // new (try to load geom)
+Bool_t doCALO         = 1;
+Bool_t doMUONTrig     = 1;
+Bool_t doImpParRes    = 1;
+Bool_t doMUON         = 1;
+Bool_t doTOF          = 1;
+Bool_t doHMPID        = 1;
+Bool_t doT0           = 1; // new
+Bool_t doZDC          = 0;
+
+Bool_t doMUONEff      = 0;   // NEEDS geometry
+Bool_t doV0           = 0;   // NEEDS MCtruth 
+
+TString     train_name         = "QA";      // QA local folder name
+TString     train_tag          = (iCollisionType)?"_Pb-Pb":"_p-p";        // Train special tag appended to 
+                                            // visible name. ("sim", "pp", ...)
+               // Name in train page (DON'T CHANGE)
+TString     visible_name       = Form("QA$2_$3%s", train_tag.Data()); //# FIXED #
+TString     job_comment        = "PWG1 QA train(no TRD, no ZDC)"; // Can add observations here
+               // Job tag (DON'T CHANGE)
+TString     job_tag            = Form("%s: %s", visible_name.Data(), job_comment.Data());
+               // Package versions - Modify as needed
+TString     root_version       = "v5-28-00a";
+TString     aliroot_version    = "v4-21-17b-AN";
+               // Production directory - change as needed for test mode
+TString     grid_datadir       = "/alice/data/2011/LHC11a";
+               // Work directory in GRID (DON'T CHANGE)
+TString     grid_workdir       = "/alice/cern.ch/user/a/alidaq/QA/QA$2";
+               // Job splitting
+Int_t       grid_split         = 20;       // Splitting
+               // Debug level
+Int_t       debug_level        = 1;        // Debugging
+               // File merging
+Int_t       maxMergeFiles      = 10;       // Max files to merge in a chunk
+               // Data pattern - change as needed for test mode
+TString     data_pattern       = "*ESDs/Pass1/*ESDs.root";
+               // Output directory (DON'T CHANGE)
+TString     alien_outdir       = "$1/QA$2";
+               // Input collection (production mode)
+TString     data_collection    = "$1/qa1.xml";
+TString     mergeExcludes      = ""; // Files to be excluded for merging
+TString     mergeDirName       = "QA$2";
+TString     terminateFiles     = "trending.root"; // Files produced during Terminate
 
 Bool_t useProductionMode       = kTRUE;
+Bool_t useMergeViaJDL          = kTRUE;
+Bool_t useFastReadOption       = kFALSE;
+Bool_t useOverwriteMode        = kTRUE;
+Bool_t useDevelopmentVersion   = kFALSE;
 
 void PilotAnalysis(const char *plugin_mode = "full")
 {
-  TGrid::Connect("alien://");
-  if (!gGrid || !gGrid->IsConnected()) {
-    ::Error("PilotAnalysis", "No grid connection");
-    return;
-  }
+  TString smode(plugin_mode);
+  smode.ToLower();
+  if (smode == "test") useProductionMode = kFALSE;
+  if (!useProductionMode) {
+     TGrid::Connect("alien://");
+     if (!gGrid || !gGrid->IsConnected()) {
+       ::Error("PilotAnalysis", "No grid connection");
+       return;
+     }
+  }   
   // Write configuration
   TString cdir = gSystem->WorkingDirectory();
   gSystem->MakeDirectory(train_name);
@@ -49,25 +102,36 @@ void PilotAnalysis(const char *plugin_mode = "full")
   out << "   doVertex        = " << doVertex << ";" << endl;
   out << "   doSPD           = " << doSPD << ";" << endl;
   out << "   doSDD           = " << doSDD << ";" << endl;
-  out << "   doFMD           = " << doFMD << ";" << endl;
+  out << "   doSSDdEdx       = " << doSSDdEdx << ";" << endl;
   out << "   doTPC           = " << doTPC << ";" << endl;
+  out << "   doTRD           = " << doTRD << ";" << endl;
+  out << "   doITS           = " << doITS << ";" << endl;
+  out << "   doITSsaTracks   = " << doITSsaTracks << ";" << endl;
+  out << "   doITSalign      = " << doITSalign << ";" << endl;
+  out << "   doZDC           = " << doZDC << ";" << endl;
+  out << "   doImpParRes     = " << doImpParRes << ";" << endl;
+  out << "   doMUON          = " << doMUON << ";" << endl;
+  out << "   doTOF           = " << doTOF << ";" << endl;
+  out << "   doHMPID         = " << doHMPID << ";" << endl;
+  out << "   doZDC           = " << doZDC << ";" << endl;
+  out << "   doT0            = " << doT0 << ";" << endl;
   out << "   doEventStat     = " << doEventStat << ";" << endl;
+  if (iCollisionType) out << "   doCentrality    = " << doCentrality << ";" << endl;
   out << "}" << endl;
   out.close();
   
   // Load libraries
-  gSystem->SetIncludePath("-I. -I$ROOTSYS/include -I$ALICE_ROOT/include -I$ALICE_ROOT/ITS");
+  gSystem->SetIncludePath("-I. -I$ROOTSYS/include -I$ALICE_ROOT/include -I$ALICE_ROOT -I$ALICE_ROOT/ITS -I$ALICE_ROOT/TRD -I$ALICE_ROOT/PWG1");
   LoadLibraries();
   // Create manager
   AliAnalysisManager *mgr  = new AliAnalysisManager("PilotAnalysis", "Production train");
-  mgr->SetNSysInfo(1);
+  mgr->SetNSysInfo(100);
   // Input handler
   AliESDInputHandlerRP *esdHandler = new AliESDInputHandlerRP();
+  esdHandler->SetReadFriends(kTRUE);
   esdHandler->SetActiveBranches("ESDfriend");
   mgr->SetInputEventHandler(esdHandler);
-
-  mgr->SetDebugLevel(3);
-  mgr->SetSaveCanvases(kTRUE);
+  mgr->SetDebugLevel(debug_level);
   
   // AnalysisTasks
   AddAnalysisTasks();
@@ -76,15 +140,8 @@ void PilotAnalysis(const char *plugin_mode = "full")
   mgr->SetGridHandler(alienHandler);
   if (mgr->InitAnalysis()) {                                                                                                              
     mgr->PrintStatus(); 
-    mgr->StartAnalysis("grid");
-    TString alien_workdir = gGrid->GetHomeDirectory();
-    alien_workdir += "analysisDATA";
-    TString configName = Form("%s/%sConfig.C", alien_workdir.Data(), train_name.Data());
-    if (strcmp(plugin_mode, "test")) {
-      printf("=== Registering configuration file <%s>===\n", configName.Data());
-      if (AliAnalysisAlien::FileExists(configName.Data())) gGrid->Rm(configName.Data());                                                     
-      TFile::Cp(Form("file:%sConfig.C",train_name.Data()), Form("alien://%s", configName.Data()));  
-    }  
+    if (!strcmp(plugin_mode, "local")) mgr->StartAnalysis("local");
+    else mgr->StartAnalysis("grid");
   }
 }
 
@@ -92,28 +149,66 @@ void LoadLibraries()
 {
   gSystem->Load("libANALYSIS");
   gSystem->Load("libANALYSISalice");
+  gSystem->Load("libCORRFW");
   gSystem->Load("libTENDER");
   gSystem->Load("libPWG0base.so");
   gSystem->Load("libPWG0dep.so");
   gSystem->Load("libPWG0selectors.so");
   gSystem->Load("libPWG1.so");
-  gSystem->Load("libPWG2.so");
-  gSystem->Load("libPWG2forward.so");
 
-  if (doSPD) {   
-    TFile::Cp(gSystem->ExpandPathName("$ALICE_ROOT/PWG1/ITS/AliAnalysisTaskSPD.cxx"), "AliAnalysisTaskSPD.cxx");
-    TFile::Cp(gSystem->ExpandPathName("$ALICE_ROOT/PWG1/ITS/AliAnalysisTaskSPD.h"), "AliAnalysisTaskSPD.h");
-    gROOT->LoadMacro("AliAnalysisTaskSPD.cxx++g");
-  }
-  if (doSDD) {  
-    TFile::Cp(gSystem->ExpandPathName("$ALICE_ROOT/PWG1/ITS/AliAnalysisTaskSDDRP.cxx"), "AliAnalysisTaskSDDRP.cxx");
-    TFile::Cp(gSystem->ExpandPathName("$ALICE_ROOT/PWG1/ITS/AliAnalysisTaskSDDRP.h"), "AliAnalysisTaskSDDRP.h");
-//    gROOT->LoadMacro("AliAnalysisTaskSDDRP.cxx++g");
+  if (doCALO) {
+     gSystem->Load("libEMCALUtils");
+     gSystem->Load("libPHOSUtils");
+     gSystem->Load("libPWG4PartCorrBase");
+     gSystem->Load("libPWG4PartCorrDep");
   }  
+  if(doMUONTrig) {
+     gSystem->Load("libPWG3base");
+     gSystem->Load("libPWG3muon");
+     gSystem->Load("libPWG3muondep");
+  }   
 }
 
 void AddAnalysisTasks()
 {
+  AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
+  mgr->SetCommonFileName("QAresults.root");
+  // Statistics task
+  mgr->AddStatisticsTask(AliVEvent::kMB);
+  //
+  // CDB connection
+  //
+  if (doCDBconnect) {
+    gROOT->LoadMacro("$ALICE_ROOT/PWG1/PilotTrain/AddTaskCDBconnect.C");
+    AliTaskCDBconnect *taskCDB = AddTaskCDBconnect();
+    if (!taskCDB) return;
+    taskCDB->SetRunNumber(runNumbers[0]);
+  }    
+  
+  //
+  // Event Statistics (Jan Fiete)
+  //
+  if (doEventStat) {
+      gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskPhysicsSelection.C");
+      AliPhysicsSelectionTask* physSelTask = AddTaskPhysicsSelection(kFALSE /*MC*/);
+//      mgr->RegisterExtraFile("event_stat.root");
+      if (!terminateFiles.IsNull()) terminateFiles += ",";
+      terminateFiles += "event_stat.root";
+  }
+  
+  //
+  // Centrality (A. Toia)
+  //
+  if (doCentrality) {
+     if (!iCollisionType) {
+        printf("Disabling centrality task for p-p\n");
+        doCentrality = kFALSE;
+     } else {           
+        gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskCentrality.C");
+        AliCentralitySelectionTask *taskCentrality = AddTaskCentrality();
+     }   
+  }   
+  
   // Vertexing (A. Dainese)
   // 
   if (doVertex) {
@@ -126,7 +221,7 @@ void AddAnalysisTasks()
   //
   if (doQAsym) {
     gROOT->LoadMacro("$ALICE_ROOT/PWG1/PilotTrain/AddTaskQAsym.C");
-    AliAnalysisTaskSE * taskqasim = AddTaskQAsym();
+    AliAnalysisTaskSE * taskqasim = AddTaskQAsym(0);
     taskqasim->SelectCollisionCandidates();
   }  
   //
@@ -137,19 +232,18 @@ void AddAnalysisTasks()
     AliAnalysisTaskSE * taskv0qa = AddTaskVZEROQA(0);
 //  taskv0qa->SelectCollisionCandidates();
   }
-  // FMD (Hans Hjersing Dalsgaard)
   //
-  if (doFMD) {
-    gROOT->LoadMacro("$ALICE_ROOT/PWG1/PilotTrain/AddTaskFMD.C");
-    AliAnalysisTaskSE* taskfmd = AddTaskFMD();
-    taskfmd->SelectCollisionCandidates();
-  }  
+  // TPC (Jacek Otwinowski & Michael Knichel)
   //
-  // TPC (Jacek Otwinowski)
   //
+  // Optionally MC information can be used by setting the 1st argument to true
+  // Optionally friends information can be switched off by setting the 2st argument 
+  // to false
+  // Optionally highMult axis can be used by setting the 3st argument to true (for PbPb)
   if (doTPC) {
-    gROOT->LoadMacro("$(ALICE_ROOT)/PWG1/TPC/macros/AddTaskPerformanceTPCQA.C");
-    AliPerformanceTask *tpcQA = AddTaskPerformanceTPCQA(kFALSE, kTRUE);
+    gROOT->LoadMacro("$ALICE_ROOT/PWG1/TPC/macros/AddTaskPerformanceTPCdEdxQA.C");
+    AliPerformanceTask *tpcQA = AddTaskPerformanceTPCdEdxQA(kFALSE, kTRUE, kFALSE);
+    tpcQA->SelectCollisionCandidates();
   }  
   //
   // SPD (A. Mastroserio)
@@ -168,16 +262,142 @@ void AddAnalysisTasks()
     tasksdd->SelectCollisionCandidates();
   }
   //
-  // Event Statistics (Jan Fiete)
+  // SSD dEdx (Marek Chojnacki)
   //
+  if (doSSDdEdx) {
+    gROOT->LoadMacro("$ALICE_ROOT/PWG1/PilotTrain/AddTaskdEdxSSDQA.C");
+    AliAnalysisTaskSE* taskssddedx = AddTaskdEdxSSDQA();
+    taskssddedx->SelectCollisionCandidates();
+  }
 
-  if (doEventStat) {
-      gROOT->LoadMacro("$ALICE_ROOT/PWG1/PilotTrain/AddTaskPhysicsSelection.C");
-      AliPhysicsSelectionTask* physSelTask = AddTaskPhysicsSelection();
-      AliPhysicsSelection* physSel = physSelTask->GetPhysicsSelection();
-      physSel->AddBackgroundIdentification(new AliBackgroundSelection());
-      AliAnalysisManager::GetAnalysisManager()->RegisterExtraFile("event_stat.root");
-  }    
+  //
+  // ITS
+  //
+  if (doITS) {
+      gROOT->LoadMacro("$ALICE_ROOT/PWG1/macros/AddTaskPerformanceITS.C");
+      AliAnalysisTaskITSTrackingCheck *itsQA = 0;
+      AliAnalysisTaskITSTrackingCheck *itsQACent0010 = 0;
+      AliAnalysisTaskITSTrackingCheck *itsQACent3050 = 0;
+      AliAnalysisTaskITSTrackingCheck *itsQACent6080 = 0;
+      if(iCollisionType==0) {
+        itsQA = AddTaskPerformanceITS(kFALSE);
+      } else {
+        itsQA = AddTaskPerformanceITS(kFALSE);
+        itsQACent0010 = AddTaskPerformanceITS(kFALSE,kFALSE,kFALSE,3500,10000);
+        itsQACent3050 = AddTaskPerformanceITS(kFALSE,kFALSE,kFALSE,590,1570);
+        itsQACent6080 = AddTaskPerformanceITS(kFALSE,kFALSE,kFALSE,70,310);
+      }
+  }
+  //
+  // ITS saTracks, align (F.Prino)
+  //
+  if (doITSsaTracks) {
+     gROOT->LoadMacro("$ALICE_ROOT/PWG1/macros/AddTaskITSsaTracks.C");
+     AliAnalysisTaskITSsaTracks *itssaTracks = AddTaskITSsaTracks(kFALSE,kFALSE);
+  }   
+  if (doITSalign) {
+     gROOT->LoadMacro("$ALICE_ROOT/PWG1/macros/AddTaskITSAlign.C");
+     AliAnalysisTaskITSAlignQA *itsAlign = AddTaskITSAlign(0,2011);
+  }   
+  //
+  // TRD (Alex Bercuci, M. Fasel) 
+  //
+  if(doTRD) {
+      gROOT->LoadMacro("$ALICE_ROOT/PWG1/macros/AddTrainPerformanceTRD.C");
+      // steer individual TRD tasks
+      Bool_t 
+      doCheckESD(kTRUE),  // AliTRDcheckESD
+      doCheckDET(kTRUE),  // AliTRDcheckDET
+      doEffic(kTRUE),     // AliTRDefficiency
+      doResolution(kTRUE),// AliTRDresolution
+      doCheckPID(kTRUE),  // AliTRDcheckPID
+      doV0Monitor(kFALSE);// AliTRDv0Monitor
+      AddTrainPerformanceTRD(Translate(doCheckESD, doCheckDET, doEffic, doResolution, doCheckPID, doV0Monitor));
+  }
+
+  //
+  // ZDC (Chiara Oppedisano) 
+  //
+  if(doZDC) {
+     gROOT->LoadMacro("$ALICE_ROOT/PWG1/ZDC/AddTaskZDCQA.C");
+     AliAnalysisTaskSE *taskZDC = AddTaskZDCQA();
+  }   
+  //
+  // Calorimetry (Gustavo Conesa)
+  //
+
+  if(doCALO) {
+      gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/QA/AddTaskCalorimeterQA.C");
+      AliAnalysisTaskParticleCorrelation *taskCaloQA = AddTaskCalorimeterQA("ESD", 2011, kFALSE, kFALSE);
+      taskCaloQA->SetDebugLevel(0);
+  }
+
+  //
+  // Muon Trigger
+  //
+  
+  if(doMUONTrig) {
+      gROOT->LoadMacro("$ALICE_ROOT/PWG1/macros/AddTaskMTRchamberEfficiency.C");
+      AliAnalysisTaskTrigChEff *taskMuonTrig = AddTaskMTRchamberEfficiency();
+  }
+
+  //
+  // Muon Efficiency
+  //
+
+  if(doMUONEff) {
+      gROOT->LoadMacro("$ALICE_ROOT/PWG3/muondep/AddTaskMUONTrackingEfficiency.C");
+      AliAnalysisTaskMuonTrackingEff *taskMuonTrackEff = AddTaskMUONTrackingEfficiency();
+  }
+  
+  //
+  // V0-Decay Reconstruction (Ana Marin)
+  // 
+
+  if (doV0) {
+      gROOT->LoadMacro("$ALICE_ROOT/PWG1/macros/AddTaskV0QA.C");
+      AliAnalysisTaskV0QA *taskv0QA = AddTaskV0QA(kFALSE);
+  }
+  //
+  // Impact parameter resolution (xianbao.yuan@pd.infn.it, andrea.dainese@pd.infn.it)
+  //
+  if (doImpParRes) {
+    gROOT->LoadMacro("$ALICE_ROOT/PWG1/macros/AddTaskImpParRes.C");
+    AliAnalysisTaskSE* taskimpparres=0;
+    if(iCollisionType==0) {
+       taskimpparres= AddTaskImpParRes();
+    } else {
+       taskimpparres= AddTaskImpParRes(kFALSE,-1,kFALSE,kFALSE);
+    }
+    taskimpparres->SelectCollisionCandidates();
+  }  
+  //
+  // MUON QA (Philippe Pillot)
+  //
+  if (doMUON) {
+    gROOT->LoadMacro("$ALICE_ROOT/PWG3/muon/AddTaskMuonQA.C");
+    AliAnalysisTaskSE* taskmuonqa= AddTaskMuonQA();
+  }  
+  //
+  // TOF (Francesca Bellini)
+  //
+  if (doTOF) {
+    gROOT->LoadMacro("$ALICE_ROOT/PWG1/TOF/AddTaskTOFQA.C");
+    AliAnalysisTaskTOFqa *tofQA = AddTaskTOFQA();
+    tofQA->SelectCollisionCandidates();
+  }  
+  //
+  // HMPID QA (Giacomo Volpe)
+  //
+  if (doHMPID) {
+    gROOT->LoadMacro("$ALICE_ROOT/PWG1/HMPID/AddTaskHmpidQA.C");
+    AliAnalysisTaskSE* taskhmpidqa= AddTaskHmpidQA(kFALSE);
+  }      
+  // T0 QA (Alla Mayevskaya
+  if (doT0) {
+    gROOT->LoadMacro("$ALICE_ROOT/PWG1/T0/AddTaskT0QA.C");
+    AliT0AnalysisTaskQA* tast0qa= AddTaskT0QA();
+  }      
 }
 
 //______________________________________________________________________________
@@ -190,9 +410,14 @@ AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode)
    AliAnalysisAlien *plugin = new AliAnalysisAlien();
 // Set the run mode (can be "full", "test", "offline", "submit" or "terminate")
    plugin->SetRunMode(plugin_mode);
-   if (useProductionMode) plugin->SetProductionMode();
+   if (useProductionMode) {
+      plugin->SetProductionMode();
+      plugin->AddDataFile(data_collection);
+   }   
    plugin->SetJobTag(job_tag);
    plugin->SetNtestFiles(1);
+   plugin->SetCheckCopy(kFALSE);
+   plugin->SetMergeDirName(mergeDirName);
 // Set versions of used packages
    plugin->SetAPIVersion("V1.1x");
    plugin->SetROOTVersion(root_version);
@@ -205,90 +430,61 @@ AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode)
    plugin->SetDataPattern(data_pattern);
 // ...then add run numbers to be considered
 //   if (!iAODanalysis) plugin->SetRunRange(run_range[0], run_range[1]);
-   plugin->SetRunPrefix("000");
-   plugin->SetOutputSingleFolder("output");
-   plugin->SetOutputToRunNo();
-   Int_t run_numbers[30] = {104065, 104155, 104157, 104159, 104160, 104315, 104316, 104320, 104321, 104439, 
-                            104792, 104793, 104799, 104800, 104801, 104802, 104803, 104821, 104824, 104825,
-                            104841, 104845, 104849, 104852, 104865, 104867, 104876, 104892, 105143, 105160};
-   for (Int_t i=0; i<30; i++) {
-      plugin->AddRunNumber(run_numbers[i]);
-   }   
+//   plugin->SetOutputSingleFolder("outpu$ALICE_ROOT/PWG1/T0/Addt");
+   if (!useProductionMode) {
+      plugin->SetRunPrefix("000");
+      plugin->SetOutputToRunNo();
+      for (Int_t i=0; i<2; i++) {
+         if (!runNumbers[i]) break;
+         plugin->AddRunNumber(runNumbers[i]);
+      }   
+   }
 // Define alien work directory where all files will be copied. Relative to alien $HOME.
-   plugin->SetGridWorkingDir("analysisDATA");
+   plugin->SetGridWorkingDir(grid_workdir);
 // Declare alien output directory. Relative to working directory.
    if (alien_outdir.IsNull()) alien_outdir = Form("output_%s",train_name.Data());
    plugin->SetGridOutputDir(alien_outdir);
 
-//   plugin->EnablePackage("");
+   if (useDevelopmentVersion) {
+     plugin->EnablePackage("STEERBase");
+     plugin->EnablePackage("ESD");
+     plugin->EnablePackage("AOD");
+     plugin->EnablePackage("ANALYSIS");
+     plugin->EnablePackage("ANALYSISalice");
+   }
 
 // Declare the analysis source files names separated by blancs. To be compiled runtime
 // using ACLiC on the worker nodes.
 // Declare all libraries (other than the default ones for the framework. These will be
 // loaded by the generated analysis macro. Add all extra files (task .cxx/.h) here.
-   plugin->AddIncludePath("-I$ROOTSYS/include -I$ALICE_ROOT/include  -I$ALICE_ROOT/ITS");
-   plugin->SetAnalysisSource("AliAnalysisTaskSPD.cxx AliAnalysisTaskSDDRP.cxx");
-   plugin->SetAdditionalLibs("libTENDER.so libPWG0base.so libPWG0dep.so libPWG0selectors.so libPWG1.so libPWG2.so libPWG2forward.so AliAnalysisTaskSPD.h AliAnalysisTaskSPD.cxx AliAnalysisTaskSDDRP.h AliAnalysisTaskSDDRP.cxx");
+   plugin->AddIncludePath("-I. -I$ROOTSYS/include -I$ALICE_ROOT/include -I$ALICE_ROOT/ITS -I$ALICE_ROOT/TRD");
+   
+   plugin->SetAdditionalLibs("libCORRFW.so libTENDER.so libPWG0base.so libPWG0dep.so libPWG0selectors.so libPWG1.so \
+                              libEMCALUtils.so libPHOSUtils.so libPWG4PartCorrBase.so libPWG4PartCorrDep.so \
+                              libPWG3base.so libPWG3muon.so libPWG3muondep.so");
      
 // Declare the output file names separated by blancs.
-// (can be like: file.root or file.root@ALICE::Niham::File)
    plugin->SetDefaultOutputs();
-//   plugin->SetMergeExcludes(mergeExclude);
-   plugin->SetMaxMergeFiles(100);
+   plugin->SetMaxMergeFiles(maxMergeFiles);
    plugin->SetNrunsPerMaster(1);
-// Optionally define the files to be archived.
-//   plugin->SetOutputArchive("log_archive.zip:stdout,stderr@ALICE::NIHAM::File root_archive.zip:AliAOD.root,AOD.tag.root@ALICE::NIHAM::File");
    
    // Put default output files to archive
-   TString listhists = "";
-   TString listaods  = "";
    AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
    TIter next(mgr->GetOutputs());
    AliAnalysisDataContainer *output;
-   while ((output=(AliAnalysisDataContainer*)next())) {
-      const char *filename = output->GetFileName();
-      if (!(strcmp(filename, "default"))) {
-         if (!mgr->GetOutputEventHandler()) continue;
-         filename = mgr->GetOutputEventHandler()->GetOutputFileName();
-         if (listaods.Length()) listaods += ",";
-         listaods += filename;
-      } else {   
-         if (listhists.Contains(filename)) continue;
-         if (listhists.Length()) listhists += ",";
-         listhists += filename;
-      }   
-   }
-   if (mgr->GetExtraFiles().Length()) {
-      if (listhists.Length()) listhists += ",";
-      listhists += mgr->GetExtraFiles();
-      listhists.ReplaceAll(" ", ",");
-   }
-   if (listhists.Length()) listhists = Form("hist_archive.zip:%s", listhists.Data());
-   if (listaods.Length())  listaods  = Form("aod_archive.zip:%s", listaods.Data());
-   if (!listhists.Length()) {
-      ::Fatal("AnalysisTrainNew", "No task output !");
-   }
-   TString outputArchive = "log_archive.zip:stdout,stderr@disk=4";
-   if (listaods.Length()) {
-      outputArchive += " ";
-      outputArchive += listaods;
-      outputArchive += "@disk=4";
-   }   
-   if (listhists.Length()) {
-      outputArchive += " ";
-      outputArchive += listhists;
-      outputArchive += "@disk=4";
-   }   
+   if (!mergeExcludes.IsNull()) plugin->SetMergeExcludes(mergeExcludes);
+   if (!terminateFiles.IsNull()) plugin->SetTerminateFiles(terminateFiles);
 // Set friends
-//   if (iAODanalysis && iPWG3d2h) 
-//      plugin->SetFriendChainName("AliAOD.VertexingHF.root");
-   plugin->SetOutputArchive(outputArchive);
 // Optionally set a name for the generated analysis macro (default MyAnalysis.C)
    plugin->SetAnalysisMacro(Form("%s.C", train_name.Data()));
+// Optionally set a name for the generated validation script
+   plugin->SetValidationScript("validation.sh");
 // Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)
-   plugin->SetSplitMaxInputFileNumber(1000);
+   plugin->SetSplitMaxInputFileNumber(grid_split);
 // Optionally set number of failed jobs that will trigger killing waiting sub-jobs.
 //   plugin->SetMaxInitFailed(5);
+// Optionally modify the number of replicas
+   plugin->SetNumberOfReplicas(5);
 // Optionally resubmit threshold.
 //   plugin->SetMasterResubmitThreshold(90);
 // Optionally set time to live (default 30000 sec)
@@ -304,5 +500,31 @@ AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode)
 // Optionally modify split mode (default 'se')    
    plugin->SetSplitMode("se");
    plugin->SetExecutableCommand("aliroot -b -q");
+// Merge via JDL
+   plugin->SetMergeViaJDL(useMergeViaJDL);
+// Use fastread option
+   plugin->SetFastReadOption(useFastReadOption);
+// UseOverwrite mode
+   plugin->SetOverwriteMode(useOverwriteMode);   
+/*********************************************************
+ ***     PROOF MODE SPECIFIC SETTINGS         ************
+ *********************************************************/
+// Proof cluster
+//   plugin->SetProofCluster("alice-caf");
+   plugin->SetProofCluster("skaf.saske.sk");
+// Dataset to be used   
+   plugin->SetProofDataSet("/alice/data/LHC10e_000128175_p1#esdTree");
+// May need to reset proof. Supported modes: 0-no reset, 1-soft, 2-hard
+   plugin->SetProofReset(0);
+// May limit number of workers
+   plugin->SetNproofWorkers(1);   
+// May use a specific version of root installed in proof
+   plugin->SetRootVersionForProof("current_dbg");
+// May set the aliroot mode. Check http://aaf.cern.ch/node/83 
+   plugin->SetAliRootMode("ALIROOT"); // Loads AF libs by default
+// May request ClearPackages (individual ClearPackage not supported)
+   plugin->SetClearPackages(kFALSE);
+// Plugin test mode works only providing a file containing test file locations
+   plugin->SetFileForTestMode(gSystem->ExpandPathName("$ALICE_ROOT/PWG1/PilotTrain/files.txt"));
    return plugin;
 }