]> git.uio.no Git - u/mrichter/AliRoot.git/blobdiff - STEER/AliAODHandler.cxx
Moving reconstruction settings to the reco params, new cosmics reco param OCDB entry...
[u/mrichter/AliRoot.git] / STEER / AliAODHandler.cxx
index 45bf43b2c50db58f1212916f82e71c3b4b5f96e2..8f50ed62b87cde32adf91cafcdb83019f2cc6550 100644 (file)
@@ -1,3 +1,4 @@
+
 /**************************************************************************
  * Copyright(c) 1998-2007, ALICE Experiment at CERN, All rights reserved. *
  *                                                                        *
@@ -25,6 +26,7 @@
 #include <TFile.h>
 #include <TString.h>
 #include <TList.h>
+#include <TROOT.h>
 
 #include "AliLog.h"
 #include "AliAODHandler.h"
@@ -64,7 +66,8 @@ AliAODHandler::AliAODHandler() :
     fMCEventH(NULL),
     fTreeA(NULL),
     fFileA(NULL),
-    fFileName("")
+    fFileName(""),
+    fExtensions(NULL)
 {
   // default constructor
 }
@@ -88,13 +91,15 @@ AliAODHandler::AliAODHandler(const char* name, const char* title):
     fMCEventH(NULL),
     fTreeA(NULL),
     fFileA(NULL),
-    fFileName("")
+    fFileName(""),
+    fExtensions(NULL)
 {
 }
 
 //______________________________________________________________________________
 AliAODHandler::~AliAODHandler() 
 {
+ // Destructor.
   delete fAODEvent;
   if(fFileA){
     // is already handled in TerminateIO
@@ -102,7 +107,7 @@ AliAODHandler::~AliAODHandler()
     delete fFileA;
   }
   delete fTreeA;
- // destructor
+  if (fExtensions) delete fExtensions;
 }
 
 //______________________________________________________________________________
@@ -119,27 +124,28 @@ Bool_t AliAODHandler::Init(Option_t* opt)
   // File opening according to execution mode
   TString option(opt);
   option.ToLower();
+  TDirectory *owd = gDirectory;
   if (option.Contains("proof")) {
     // proof
-    if (option.Contains("special")) {
-       // File for tree already opened on slave -> merging via files
-       fFileA = gFile;
-       CreateTree(1);
-    } else {   
-       // Merging in memory
-       CreateTree(0);
-    }   
+    // Merging via files. Need to access analysis manager via interpreter.
+    gROOT->ProcessLine(Form("AliAnalysisManager::GetAnalysisManager()->OpenProofFile(\"%s\", \"RECREATE\");", fFileName.Data()));
+    gROOT->ProcessLine(Form("AliAnalysisManager::GetAnalysisManager()->GetCommonOutputContainer()->SetFile((TFile*)0x%lx);", gFile));
+    fFileA = gFile;
   } else {
     // local and grid
-    TDirectory *owd = gDirectory;
     fFileA = new TFile(fFileName.Data(), "RECREATE");
-    CreateTree(1);
-    owd->cd();
   }
+  CreateTree(1);
+  owd->cd();
+  if (fExtensions) {
+     TIter next(fExtensions);
+     AliAODExtension *ext;
+     while ((ext=(AliAODExtension*)next())) ext->Init(option);
+  }   
   return kTRUE;
 }
 
-
+//______________________________________________________________________________
 void AliAODHandler::StoreMCParticles(){
 
   // 
@@ -184,118 +190,118 @@ void AliAODHandler::StoreMCParticles(){
   // 
 
   AliHeader* header = fMCEventH->MCEvent()->Header();
-  if (!header)return;
-
-  // get the MC vertex
-  AliGenEventHeader* genHeader = header->GenEventHeader();
-  TArrayF vtxMC(3);
-  genHeader->PrimaryVertex(vtxMC);
-  mcHeader->SetVertex(vtxMC[0],vtxMC[1],vtxMC[2]);
-
-  // we search the MCEventHeaders first 
-  // Two cases, cocktail or not...
-  AliGenCocktailEventHeader* genCocktailHeader = dynamic_cast<AliGenCocktailEventHeader*>(genHeader);
-  if(genCocktailHeader){
-    // we have a coktail header
-    mcHeader->AddGeneratorName(genHeader->GetName());
-    // Loop from the back so that the first one sets the process type
-    TList* headerList = genCocktailHeader->GetHeaders();
-    for(int i = headerList->GetEntries()-1;i>=0;--i){
-      AliGenEventHeader *headerEntry = dynamic_cast<AliGenEventHeader*>(headerList->At(i));
-      SetMCHeaderInfo(mcHeader,headerEntry);
-    }
-  }
-  else{
-    // No Cocktail just take the first one
-    SetMCHeaderInfo(mcHeader,genHeader);
+   // get the MC vertex
+  AliGenEventHeader* genHeader = 0;
+  if (header) genHeader = header->GenEventHeader();
+  if (genHeader) {
+      TArrayF vtxMC(3);
+      genHeader->PrimaryVertex(vtxMC);
+      mcHeader->SetVertex(vtxMC[0],vtxMC[1],vtxMC[2]);
+
+      // we search the MCEventHeaders first 
+      // Two cases, cocktail or not...
+      AliGenCocktailEventHeader* genCocktailHeader = dynamic_cast<AliGenCocktailEventHeader*>(genHeader);
+      if(genCocktailHeader){
+         // we have a coktail header
+         mcHeader->AddGeneratorName(genHeader->GetName());
+         // Loop from the back so that the first one sets the process type
+         TList* headerList = genCocktailHeader->GetHeaders();
+         for(int i = headerList->GetEntries()-1;i>=0;--i){
+             AliGenEventHeader *headerEntry = dynamic_cast<AliGenEventHeader*>(headerList->At(i));
+             SetMCHeaderInfo(mcHeader,headerEntry);
+         }
+      }
+      else{
+         // No Cocktail just take the first one
+         SetMCHeaderInfo(mcHeader,genHeader);
+      }
   }
+  
 
 
 
 
   // Store the AliAODParticlesMC
-
-  Int_t np    = pStack->GetNtrack();
-  Int_t nprim = pStack->GetNprimary();
+  AliMCEvent* mcEvent = fMCEventH->MCEvent();
+  
+  Int_t np    = mcEvent->GetNumberOfTracks();
+  Int_t nprim = mcEvent->GetNumberOfPrimaries();
 
 
   Int_t j = 0;
   TClonesArray& l = *mcarray;
 
-  for(int i = 0;i < np;++i){
-    if(fMCEventH->IsParticleSelected(i)){
-
-      Int_t flag = 0;
-      TParticle *part = pStack->Particle(i);
-      if(i<nprim)flag |= AliAODMCParticle::kPrimary;
-      if(pStack->IsPhysicalPrimary(i))flag |= AliAODMCParticle::kPhysicalPrim;
-
-      if(fMCEventH->GetNewLabel(i)!=j){
-       AliError(Form("MISMATCH New label %d j: %d",fMCEventH->GetNewLabel(i),j));
-      }
-      AliAODMCParticle mcpart_tmp(part,i,flag);
-
-      // 
-      Int_t d0 =  mcpart_tmp.GetDaughter(0);
-      Int_t d1 =  mcpart_tmp.GetDaughter(1);
-      Int_t m =  mcpart_tmp.GetMother();
-
-      // other than for the track labels, negative values mean
-      // no daughter/mother so preserve it
-      if(d0<0 && d1<0){
-       // no first daughter -> no second daughter
-       // nothing to be done
-       // second condition not needed just for sanity check at the end
-       mcpart_tmp.SetDaughter(0,d0);
-       mcpart_tmp.SetDaughter(1,d1);
-      }
-      else if(d1 < 0 && d0 >= 0){
-       // Only one daughter
-       // second condition not needed just for sanity check at the end
-       if(fMCEventH->IsParticleSelected(d0)){
-         mcpart_tmp.SetDaughter(0,fMCEventH->GetNewLabel(d0));
-       }
-       else{
-         mcpart_tmp.SetDaughter(0,-1);
-       }
-       mcpart_tmp.SetDaughter(1,d1);
-      }
-      else if (d0 > 0 && d1 > 0 ){
-       // we have two or more daughters loop on the stack to see if they are
-       // selected
-       Int_t d0_tmp = -1;
-       Int_t d1_tmp = -1;
-       for(int id = d0; id<=d1;++id){
-         if(fMCEventH->IsParticleSelected(id)){
-           if(d0_tmp==-1){
-             // first time
-             d0_tmp = fMCEventH->GetNewLabel(id);
-             d1_tmp = d0_tmp; // this is to have the same schema as on the stack i.e. with one daugther d0 and d1 are the same 
-           }
-           else d1_tmp = fMCEventH->GetNewLabel(id);
+  for(int i = 0; i < np; ++i){
+      if(fMCEventH->IsParticleSelected(i)){
+         Int_t flag = 0;
+         AliMCParticle* mcpart =  (AliMCParticle*) mcEvent->GetTrack(i);
+         if(i<nprim)flag |= AliAODMCParticle::kPrimary;
+         
+         if(mcEvent->IsPhysicalPrimary(i))flag |= AliAODMCParticle::kPhysicalPrim;
+         
+         if(fMCEventH->GetNewLabel(i)!=j){
+             AliError(Form("MISMATCH New label %d j: %d",fMCEventH->GetNewLabel(i),j));
          }
-       }
-       mcpart_tmp.SetDaughter(0,d0_tmp);
-       mcpart_tmp.SetDaughter(1,d1_tmp);
-      }
-      else{
-       AliError(Form("Unxpected indices %d %d",d0,d1));
-      }
 
-      if(m<0){
-       mcpart_tmp.SetMother(m);
-      }
-      else{
-       if(fMCEventH->IsParticleSelected(m))mcpart_tmp.SetMother(fMCEventH->GetNewLabel(m));
-       else AliError("PROBLEM Mother not selected");
+         AliAODMCParticle mcpart_tmp(mcpart,i,flag);
+         
+         // 
+         Int_t d0 =  mcpart_tmp.GetDaughter(0);
+         Int_t d1 =  mcpart_tmp.GetDaughter(1);
+         Int_t m =   mcpart_tmp.GetMother();
+         
+         // other than for the track labels, negative values mean
+         // no daughter/mother so preserve it
+         
+         if(d0<0 && d1<0){
+             // no first daughter -> no second daughter
+             // nothing to be done
+             // second condition not needed just for sanity check at the end
+             mcpart_tmp.SetDaughter(0,d0);
+             mcpart_tmp.SetDaughter(1,d1);
+         } else if(d1 < 0 && d0 >= 0) {
+             // Only one daughter
+             // second condition not needed just for sanity check at the end
+             if(fMCEventH->IsParticleSelected(d0)){
+                 mcpart_tmp.SetDaughter(0,fMCEventH->GetNewLabel(d0));
+             } else {
+                 mcpart_tmp.SetDaughter(0,-1);
+             }
+             mcpart_tmp.SetDaughter(1,d1);
+         }
+         else if (d0 > 0 && d1 > 0 ){
+             // we have two or more daughters loop on the stack to see if they are
+             // selected
+             Int_t d0_tmp = -1;
+             Int_t d1_tmp = -1;
+             for(int id = d0; id<=d1;++id){
+                 if(fMCEventH->IsParticleSelected(id)){
+                     if(d0_tmp==-1){
+                         // first time
+                         d0_tmp = fMCEventH->GetNewLabel(id);
+                         d1_tmp = d0_tmp; // this is to have the same schema as on the stack i.e. with one daugther d0 and d1 are the same 
+                     }
+                     else d1_tmp = fMCEventH->GetNewLabel(id);
+                 }
+             }
+             mcpart_tmp.SetDaughter(0,d0_tmp);
+             mcpart_tmp.SetDaughter(1,d1_tmp);
+         } else {
+             AliError(Form("Unxpected indices %d %d",d0,d1));
+         }
+         
+         if(m<0){
+             mcpart_tmp.SetMother(m);
+         } else {
+             if(fMCEventH->IsParticleSelected(m))mcpart_tmp.SetMother(fMCEventH->GetNewLabel(m));
+             else AliError(Form("PROBLEM Mother not selected %d \n", m));
+         }
+         
+         new (l[j++]) AliAODMCParticle(mcpart_tmp);
+         
       }
-
-      new (l[j++]) AliAODMCParticle(mcpart_tmp);
-      
-    }
   }
-  AliInfo(Form("AliAODHandler::StoreMCParticles: Selected %d (Primaries %d / total %d) after validation",
+  AliInfo(Form("AliAODHandler::StoreMCParticles: Selected %d (Primaries %d / total %d) after validation \n",
               j,nprim,np));
   
   // Set the labels in the AOD output...
@@ -307,13 +313,17 @@ void AliAODHandler::StoreMCParticles(){
     for(int it = 0; it < fAODEvent->GetNTracks();++it){
       AliAODTrack *track = fAODEvent->GetTrack(it);
       
-      if(TMath::Abs(track->GetLabel())>np||track->GetLabel()==0){
-       AliWarning(Form("Wrong ESD track label %d",track->GetLabel()));
+      Int_t label = TMath::Abs(track->GetLabel());
+      if (label >= AliMCEvent::BgLabelOffset()) label =  mcEvent->BgLabelToIndex(label);
+      
+      
+      if(label > np || track->GetLabel() == 0){
+       AliWarning(Form("Wrong ESD track label %5d (%5d)",track->GetLabel(), label));
       }
-      if(fMCEventH->GetNewLabel(track->GetLabel())==0){
-       AliWarning(Form("New label not found for %d",track->GetLabel()));
+      if(fMCEventH->GetNewLabel(label) == 0){
+       AliWarning(Form("New label not found for %5d (%5d)",track->GetLabel(), label));
       }
-      track->SetLabel(fMCEventH->GetNewLabel(track->GetLabel()));
+      track->SetLabel(fMCEventH->GetNewLabel(label));
     }
   }
   
@@ -350,6 +360,7 @@ void AliAODHandler::StoreMCParticles(){
 
 }
 
+//______________________________________________________________________________
 Bool_t AliAODHandler::FinishEvent()
 {
   // Fill data structures
@@ -357,6 +368,14 @@ Bool_t AliAODHandler::FinishEvent()
     fAODEvent->MakeEntriesReferencable();
     StoreMCParticles();
     FillTree();
+    if (fExtensions) {
+      TIter next(fExtensions);
+      AliAODExtension *ext;
+      while ((ext=(AliAODExtension*)next())) {
+        ext->GetAOD()->MakeEntriesReferencable();
+        ext->GetTree()->Fill();
+      }  
+    }       
   }
 
   if (fIsStandard) fAODEvent->ResetStd();
@@ -368,20 +387,31 @@ Bool_t AliAODHandler::FinishEvent()
 //______________________________________________________________________________
 Bool_t AliAODHandler::Terminate()
 {
-    // Terminate 
-    AddAODtoTreeUserInfo();
-    return kTRUE;
+  // Terminate 
+  AddAODtoTreeUserInfo();
+  if (fExtensions) {
+    TIter next(fExtensions);
+    AliAODExtension *ext;
+    while ((ext=(AliAODExtension*)next())) ext->GetTree()->GetUserInfo()->Add(ext->GetAOD());
+  }  
+  return kTRUE;
 }
 
 //______________________________________________________________________________
 Bool_t AliAODHandler::TerminateIO()
 {
-    // Terminate IO
-    if (fFileA) {
-       fFileA->Close();
-       delete fFileA;
-    }
-    return kTRUE;
+  // Terminate IO
+  if (fFileA) {
+    fFileA->Close();
+    delete fFileA;
+    fFileA = 0;
+  }
+  if (fExtensions) {
+    TIter next(fExtensions);
+    AliAODExtension *ext;
+    while ((ext=(AliAODExtension*)next())) ext->TerminateIO();
+  }  
+  return kTRUE;
 }
 
 //______________________________________________________________________________
@@ -408,9 +438,15 @@ void AliAODHandler::AddAODtoTreeUserInfo()
 }
 
 //______________________________________________________________________________
-void AliAODHandler::AddBranch(const char* cname, void* addobj)
+void AliAODHandler::AddBranch(const char* cname, void* addobj, const char* filename)
 {
-    // Add a new branch to the aod 
+    // Add a new branch to the aod. Added optional filename parameter if the
+    // branch should be written to a separate file.
+    if (strlen(filename)) {
+       AliAODExtension *ext = AddExtension(filename);
+       ext->AddBranch(cname, addobj);
+       return;
+    }
     TDirectory *owd = gDirectory;
     if (fFileA) {
       fFileA->cd();
@@ -434,6 +470,24 @@ void AliAODHandler::AddBranch(const char* cname, void* addobj)
     owd->cd();
 }
 
+//______________________________________________________________________________
+AliAODExtension *AliAODHandler::AddExtension(const char *filename, const char *title)
+{
+// Add an AOD extension with some branches in a different file.
+   TString fname(filename);
+   if (!fname.EndsWith(".root")) fname += ".root";
+   if (!fExtensions) {
+      fExtensions = new TObjArray();
+      fExtensions->SetOwner();
+   }   
+   AliAODExtension *ext = (AliAODExtension*)fExtensions->FindObject(fname);
+   if (!ext) {
+      ext = new AliAODExtension(fname, title);
+      fExtensions->Add(ext);
+   }   
+   return ext;
+}
+   
 //______________________________________________________________________________
 void AliAODHandler::SetOutputFileName(const char* fname)
 {
@@ -448,6 +502,7 @@ const char *AliAODHandler::GetOutputFileName()
    return fFileName.Data();
 }
 
+//______________________________________________________________________________
 void  AliAODHandler::SetMCHeaderInfo(AliAODMCHeader *mcHeader,AliGenEventHeader *genHeader){
 
 
@@ -455,17 +510,14 @@ void  AliAODHandler::SetMCHeaderInfo(AliAODMCHeader *mcHeader,AliGenEventHeader
   // Needed since different ProcessType and ImpactParamter are not 
   // in the base class...
   // We don't encode process types for event cocktails yet
-  // coul be done e.g. by adding offsets depnding on the generator
-
+  // could be done e.g. by adding offsets depnding on the generator
 
   mcHeader->AddGeneratorName(genHeader->GetName());
-
-
-
   if(!genHeader)return;
   AliGenPythiaEventHeader *pythiaGenHeader = dynamic_cast<AliGenPythiaEventHeader*>(genHeader);
     if (pythiaGenHeader) {
       mcHeader->SetEventType(pythiaGenHeader->ProcessType());
+      mcHeader->SetPtHard(pythiaGenHeader->GetPtHard());
       return;
     }
     
@@ -485,3 +537,92 @@ void  AliAODHandler::SetMCHeaderInfo(AliAODMCHeader *mcHeader,AliGenEventHeader
   AliWarning(Form("MC Eventheader not known: %s",genHeader->GetName()));
 
 }
+
+ClassImp(AliAODExtension)
+
+//-------------------------------------------------------------------------
+//     Support class for AOD extensions. This is created by the user analysis
+//     that requires a separate file for some AOD branches. The name of the 
+//     AliAODExtension object is the file name where the AOD branches will be
+//     stored.
+//-------------------------------------------------------------------------
+
+//______________________________________________________________________________
+AliAODExtension::~AliAODExtension()
+{
+// Destructor.
+  delete fAODEvent;
+  if(fFileE){
+    // is already handled in TerminateIO
+    fFileE->Close();
+    delete fFileE;
+  }
+  delete fTreeE;
+}
+
+//______________________________________________________________________________
+void AliAODExtension::AddBranch(const char* cname, void* addobj)
+{
+    // Add a new branch to the aod 
+    if (!fAODEvent) {
+       char type[20];
+       gROOT->ProcessLine(Form("TString s_tmp; AliAnalysisManager::GetAnalysisManager()->GetAnalysisTypeString(s_tmp); sprintf((char*)0x%lx, \"%%s\", s_tmp.Data());", type));
+       Init(type);
+    }
+    TDirectory *owd = gDirectory;
+    if (fFileE) {
+      fFileE->cd();
+    }
+    char** apointer = (char**) addobj;
+    TObject* obj = (TObject*) *apointer;
+
+    fAODEvent->AddObject(obj);
+    const Int_t kSplitlevel = 99; // default value in TTree::Branch()
+    const Int_t kBufsize = 32000; // default value in TTree::Branch()
+
+    if (!fTreeE->FindBranch(obj->GetName())) {
+      // Do the same as if we book via 
+      // TTree::Branch(TCollection*)
+      
+      fTreeE->Bronch(obj->GetName(), cname, fAODEvent->GetList()->GetObjectRef(obj),
+                    kBufsize, kSplitlevel - 1);
+      //    fTreeA->Branch(obj->GetName(), cname, addobj);
+    }
+    owd->cd();
+}
+
+//______________________________________________________________________________
+Bool_t AliAODExtension::Init(Option_t *option)
+{
+// Initialize IO.
+  if(!fAODEvent) fAODEvent = new AliAODEvent();
+  TDirectory *owd = gDirectory;
+  TString opt(option);
+  opt.ToLower();
+  if (opt.Contains("proof")) {
+    // proof
+    // Merging via files. Need to access analysis manager via interpreter.
+    gROOT->ProcessLine(Form("AliAnalysisManager::GetAnalysisManager()->OpenProofFile(\"%s\", \"RECREATE\");", fName.Data()));
+    fFileE = gFile;
+  } else {
+    fFileE = new TFile(GetName(), "RECREATE");
+  }  
+  fTreeE = new TTree("aodTree", "AliAOD tree");
+  fTreeE->Branch(fAODEvent->GetList());
+  owd->cd();
+  return kTRUE;
+}
+
+//______________________________________________________________________________
+Bool_t AliAODExtension::TerminateIO()
+{
+  // Terminate IO
+  if (fFileE) {
+    fFileE->Write();
+    fFileE->Close();
+    delete fFileE;
+    fFileE = 0;
+  }
+  return kTRUE;
+}