/*
$Log$
+Revision 1.19 2007/10/02 09:46:08 arcelli
+add methods to retrieve real survey data, and make some analysis (by B. Guerzoni)
+
+Revision 1.17 2007/06/06 16:26:46 arcelli
+remove fall-back call to local CDB storage
+
+Revision 1.16 2007/05/15 16:25:44 cvetan
+Moving the alignment-related static methods from AliAlignObj to the new geometry steering class AliGeomManager (macro from Raffaele)
+
+Revision 1.15 2007/05/03 09:25:10 decaro
+Coding convention: RN13 violation -> suppression
+
+Revision 1.14 2007/04/18 14:49:54 arcelli
+Some code cleanup, added more debug info
+
+Revision 1.13 2007/04/17 16:38:36 arcelli
+Include Methods to derive TOF AlignObjs from Survey Data
+
+Revision 1.12 2007/02/28 18:09:23 arcelli
+Add protection against failed retrieval of the CDB cal object
+
+Revision 1.11 2006/09/19 14:31:26 cvetan
+Bugfixes and clean-up of alignment object classes. Introduction of so called symbolic names used to identify the alignable volumes (Raffaele and Cvetan)
+
+Revision 1.10 2006/08/22 13:26:05 arcelli
+removal of effective c++ warnings (C.Zampolli)
+
+Revision 1.9 2006/08/10 14:46:54 decaro
+TOF raw data format: updated version
+
Revision 1.8 2006/05/04 19:41:42 hristov
Possibility for partial TOF geometry (S.Arcelli)
#include <Rtypes.h>
+#include "TGeoMatrix.h"
+#include "TMath.h"
+#include "TFile.h"
#include "TRandom.h"
+#include "TGeoManager.h"
+#include "TGeoVolume.h"
+#include "TGeoBBox.h"
+#include "TGeoTrd1.h"
+#include "TGeoPhysicalNode.h"
+#include "TGeoNode.h"
+#include "TObjString.h"
#include "AliLog.h"
-#include "AliAlignObj.h"
-#include "AliAlignObjAngles.h"
+//#include "AliAlignObj.h"
+#include "AliAlignObjParams.h"
+#include "AliAlignObjMatrix.h"
#include "AliCDBManager.h"
#include "AliCDBMetaData.h"
#include "AliCDBId.h"
#include "AliCDBEntry.h"
#include "AliTOFAlignment.h"
+#include "AliSurveyObj.h"
+#include "AliSurveyPoint.h"
ClassImp(AliTOFAlignment)
-//_____________________________________________________________________________
-AliTOFAlignment::AliTOFAlignment():TTask("AliTOFAlignment","") {
- //AliTOFalignment main Ctor
+const Double_t AliTOFAlignment::fgkRorigTOF = 384.5; // Mean Radius of the TOF ext. volume, cm
+const Double_t AliTOFAlignment::fgkX1BTOF = 124.5; //x1 size of BTOF
+const Double_t AliTOFAlignment::fgkX2BTOF = 134.7262; //x2 size of BTOF
+const Double_t AliTOFAlignment::fgkYBTOF = 747.2; //y size of BTOF
+const Double_t AliTOFAlignment::fgkZBTOF = 29.0; //z size of BTOF
+const Double_t AliTOFAlignment::fgkXFM = 38.0; //x pos of FM in BTOF, cm
+const Double_t AliTOFAlignment::fgkYFM = 457.3; //y pos of FM in BTOF, cm
+const Double_t AliTOFAlignment::fgkZFM = 11.2; //z pos of FM in BTOF, cm
- fNTOFAlignObj=0;
- fTOFAlignObjArray=0x0;
+//_____________________________________________________________________________
+AliTOFAlignment::AliTOFAlignment():
+ TTask("AliTOFAlignment",""),
+ fNTOFAlignObj(0),
+ fTOFmgr(0x0),
+ fTOFAlignObjArray(0x0)
+ {
+ //AliTOFalignment main Ctor
+ for(Int_t i=0; i<18;i++)
+ for(Int_t j=0; j<5; j++)
+ fNFMforSM[i][j]=0;
+ for(Int_t i=0; i<72; i++)
+ for (Int_t j=0; j<6; j++)
+ fCombFMData[i][j]=0;
}
//_____________________________________________________________________________
-AliTOFAlignment::AliTOFAlignment(const AliTOFAlignment &t):TTask("AliTOFAlignment",""){
+AliTOFAlignment::AliTOFAlignment(const AliTOFAlignment &t):
+ TTask(t),
+ fNTOFAlignObj(t.fNTOFAlignObj),
+ fTOFmgr(0x0),
+ fTOFAlignObjArray(t.fTOFAlignObjArray)
+{
//AliTOFAlignment copy Ctor
- fNTOFAlignObj=t.fNTOFAlignObj;
- fTOFAlignObjArray=t.fTOFAlignObjArray;
-
+ //AliTOFalignment main Ctor
+ for(Int_t i=0; i<18;i++)
+ for(Int_t j=0; j<5; j++)
+ fNFMforSM[i][j]=t.fNFMforSM[i][j];
+ for(Int_t i=0; i<72; i++)
+ for (Int_t j=0; j<6; j++)
+ fCombFMData[i][j]=t.fCombFMData[i][j];
}
-
//_____________________________________________________________________________
AliTOFAlignment& AliTOFAlignment::operator=(const AliTOFAlignment &t){
//AliTOFAlignment assignment operator
- this->fNTOFAlignObj=t.fNTOFAlignObj;
- this->fTOFAlignObjArray=t.fTOFAlignObjArray;
+ if (&t == this)
+ return *this;
+
+ TTask::operator=(t);
+ fNTOFAlignObj=t.fNTOFAlignObj;
+ fTOFmgr=t.fTOFmgr;
+ fTOFAlignObjArray=t.fTOFAlignObjArray;
return *this;
}
-
//_____________________________________________________________________________
-AliTOFAlignment::~AliTOFAlignment() {delete fTOFAlignObjArray;}
+AliTOFAlignment::~AliTOFAlignment() {
+ delete fTOFAlignObjArray;
+ delete fTOFmgr;
+}
//_____________________________________________________________________________
-void AliTOFAlignment::Smear( Float_t *tr, Float_t *rot)
+void AliTOFAlignment::Smear(Float_t * const tr, Float_t * const rot)
{
//Introduce Random Offset/Tilts
fTOFAlignObjArray = new TObjArray(kMaxAlignObj);
TRandom *rnd = new TRandom(1567);
Int_t nSMTOF = 18;
- AliAlignObj::ELayerID iLayer = AliAlignObj::kInvalidLayer;
+ AliGeomManager::ELayerID iLayer = AliGeomManager::kInvalidLayer;
UShort_t iIndex=0; //dummy volume index
- // AliAlignObj::ELayerID iLayer = AliAlignObj::kTOF;
+ // AliGeomManager::ELayerID iLayer = AliGeomManager::kTOF;
// Int_t iIndex=1; //dummy volume index
- UShort_t dvoluid = AliAlignObj::LayerToVolUID(iLayer,iIndex); //dummy volume identity
+ UShort_t dvoluid = AliGeomManager::LayerToVolUID(iLayer,iIndex); //dummy volume identity
Int_t i;
for (i = 0; i<nSMTOF ; i++) {
Char_t path[100];
dpsi = rot[0];
dtheta = rot[1];
dphi = rot[2];
- AliAlignObjAngles *o =new AliAlignObjAngles(path, dvoluid, dx, dy, dz, dpsi, dtheta, dphi);
+ AliAlignObjParams *o =new AliAlignObjParams(path, dvoluid, dx, dy, dz, dpsi, dtheta, dphi, kTRUE);
fTOFAlignObjArray->Add(o);
}
}
//_____________________________________________________________________________
-void AliTOFAlignment::Align( Float_t *tr, Float_t *rot)
+void AliTOFAlignment::Align(Float_t * const tr, Float_t * const rot)
{
//Introduce Offset/Tilts
Int_t nSMTOF = 18;
- AliAlignObj::ELayerID iLayer = AliAlignObj::kInvalidLayer;
+ AliGeomManager::ELayerID iLayer = AliGeomManager::kInvalidLayer;
UShort_t iIndex=0; //dummy volume index
- // AliAlignObj::ELayerID iLayer = AliAlignObj::kTOF;
- // Int_t iIndex=1; //dummy volume index
- UShort_t dvoluid = AliAlignObj::LayerToVolUID(iLayer,iIndex); //dummy volume identity
+ UShort_t dvoluid = AliGeomManager::LayerToVolUID(iLayer,iIndex); //dummy volume identity
Int_t i;
for (i = 0; i<nSMTOF ; i++) {
dtheta = rot[1];
dphi = rot[2];
- AliAlignObjAngles *o =new AliAlignObjAngles(path, dvoluid, dx, dy, dz, dpsi, dtheta, dphi);
+ AliAlignObjParams *o =new AliAlignObjParams(path, dvoluid, dx, dy, dz, dpsi, dtheta, dphi, kTRUE);
fTOFAlignObjArray->Add(o);
}
fNTOFAlignObj=fTOFAlignObjArray->GetEntries();
AliInfo(Form("Number of Alignable Volumes: %d",fNTOFAlignObj));
}
//_____________________________________________________________________________
-void AliTOFAlignment::WriteParOnCDB(Char_t *sel, Int_t minrun, Int_t maxrun)
+void AliTOFAlignment::WriteParOnCDB(const Char_t *sel, Int_t minrun, Int_t maxrun)
{
//Write Align Par on CDB
AliCDBManager *man = AliCDBManager::Instance();
- if(!man->IsDefaultStorageSet())man->SetDefaultStorage("local://$ALICE_ROOT");
- Char_t *sel1 = "AlignPar" ;
+ const Char_t *sel1 = "AlignPar" ;
Char_t out[100];
sprintf(out,"%s/%s",sel,sel1);
AliCDBId idTOFAlign(out,minrun,maxrun);
man->Put(fTOFAlignObjArray,idTOFAlign,mdTOFAlign);
}
//_____________________________________________________________________________
-void AliTOFAlignment::ReadParFromCDB(Char_t *sel, Int_t nrun)
+void AliTOFAlignment::ReadParFromCDB(const Char_t *sel, Int_t nrun)
{
//Read Align Par from CDB
AliCDBManager *man = AliCDBManager::Instance();
- if(!man->IsDefaultStorageSet())man->SetDefaultStorage("local://$ALICE_ROOT");
- Char_t *sel1 = "AlignPar" ;
+ const Char_t *sel1 = "AlignPar" ;
Char_t out[100];
sprintf(out,"%s/%s",sel,sel1);
AliCDBEntry *entry = man->Get(out,nrun);
+ if (!entry) {
+ AliError(Form("Failed to get entry: %s",out));
+ return;
+ }
fTOFAlignObjArray=(TObjArray*)entry->GetObject();
fNTOFAlignObj=fTOFAlignObjArray->GetEntries();
AliInfo(Form("Number of Alignable Volumes from CDB: %d",fNTOFAlignObj));
}
//_____________________________________________________________________________
-void AliTOFAlignment::WriteSimParOnCDB(Char_t *sel, Int_t minrun, Int_t maxrun)
+void AliTOFAlignment::WriteSimParOnCDB(const Char_t *sel, Int_t minrun, Int_t maxrun)
{
//Write Sim Align Par on CDB
AliCDBManager *man = AliCDBManager::Instance();
- if(!man->IsDefaultStorageSet())man->SetDefaultStorage("local://$ALICE_ROOT");
- Char_t *sel1 = "AlignSimPar" ;
+ const Char_t *sel1 = "AlignSimPar" ;
Char_t out[100];
sprintf(out,"%s/%s",sel,sel1);
AliCDBId idTOFAlign(out,minrun,maxrun);
man->Put(fTOFAlignObjArray,idTOFAlign,mdTOFAlign);
}
//_____________________________________________________________________________
-void AliTOFAlignment::ReadSimParFromCDB(Char_t *sel, Int_t nrun){
+void AliTOFAlignment::ReadSimParFromCDB(const Char_t *sel, Int_t nrun){
//Read Sim Align Par from CDB
AliCDBManager *man = AliCDBManager::Instance();
- if(!man->IsDefaultStorageSet())man->SetDefaultStorage("local://$ALICE_ROOT");
- Char_t *sel1 = "AlignSimPar" ;
+ const Char_t *sel1 = "AlignSimPar" ;
Char_t out[100];
sprintf(out,"%s/%s",sel,sel1);
AliCDBEntry *entry = man->Get(out,nrun);
{
//Write Align Par on CDB for DC06
AliCDBManager *man = AliCDBManager::Instance();
- if(!man->IsDefaultStorageSet())man->SetDefaultStorage("local://$ALICE_ROOT");
AliCDBId idTOFAlign("TOF/Align/Data",0,0);
AliCDBMetaData *mdTOFAlign = new AliCDBMetaData();
mdTOFAlign->SetComment("Alignment objects for ideal geometry, i.e. applying them to TGeo has to leave geometry unchanged");
{
//Read Sim Align Par from CDB for DC06
AliCDBManager *man = AliCDBManager::Instance();
- if(!man->IsDefaultStorageSet())man->SetDefaultStorage("local://$ALICE_ROOT");
AliCDBEntry *entry = man->Get("TOF/Align/Data",0);
fTOFAlignObjArray=(TObjArray*)entry->GetObject();
fNTOFAlignObj=fTOFAlignObjArray->GetEntries();
AliInfo(Form("Number of Alignable Volumes from CDB: %d",fNTOFAlignObj));
}
+
+//_____________________________________________________________________________
+void AliTOFAlignment::BuildGeomForSurvey()
+{
+
+ //Generates the ideal TOF structure with four Fiducial Marks in each
+ //supermodule (two on each z side) in their expected position.
+ //Make BTOF
+
+ fTOFmgr = new TGeoManager("Geom","survey to alignment for TOF");
+ TGeoMedium *medium = 0;
+ TGeoVolume *top = fTOFmgr->MakeBox("TOP",medium,1000,1000,1000);
+ fTOFmgr->SetTopVolume(top);
+ // make shape components:
+ // This is the BTOF containing the FTOA
+ TGeoTrd1 *strd1 = new TGeoTrd1(fgkX1BTOF*0.5,fgkX2BTOF*0.5, fgkYBTOF*0.5,fgkZBTOF*0.5);
+ TGeoVolume* trd1[18];
+
+ // Now four fiducial marks on SM, expressed in local coordinates
+ // They are positioned at x=+/- 38 cm, y=+/- 457.3 cm, z=11.2 cm
+
+ TGeoBBox *fmbox = new TGeoBBox(1,1,1);
+ TGeoVolume* fm = new TGeoVolume("FM",fmbox);
+ fm->SetLineColor(2);
+
+
+ TGeoTranslation* mAtr = new TGeoTranslation("mAtr",-fgkXFM, -fgkYFM ,fgkZFM);
+ TGeoTranslation* mBtr = new TGeoTranslation("mBtr",fgkXFM, -fgkYFM ,fgkZFM );
+ TGeoTranslation* mCtr = new TGeoTranslation("mCtr",fgkXFM, fgkYFM ,fgkZFM );
+ TGeoTranslation* mDtr = new TGeoTranslation("mDtr",-fgkXFM, fgkYFM ,fgkZFM );
+
+ // position all this stuff in the global ALICE frame
+
+ char name[16];
+ Double_t smX = 0.;
+ Double_t smY = 0.;
+ Double_t smZ = 0.;
+ Float_t smR = fgkRorigTOF;
+ for (Int_t iSM = 0; iSM < 18; iSM++) {
+ Int_t mod = iSM + 13;
+ if (mod > 17) mod -= 18;
+ sprintf(name, "BTOF%d",mod);
+ trd1[iSM] = new TGeoVolume(name,strd1);
+ Float_t phi = iSM * 20.;
+ Float_t phi2 = 270 + phi;
+ if (phi2 >= 360.) phi2 -= 360.;
+ smX = TMath::Sin(phi*TMath::Pi()/180.)*smR;
+ smY = -TMath::Cos(phi*TMath::Pi()/180.)*smR;
+ smZ = 0.;
+ TGeoRotation* bTOFRot = new TGeoRotation("bTOFRot",phi,90,0.);
+ TGeoCombiTrans trans = *(new TGeoCombiTrans(smX,smY,smZ, bTOFRot));
+ TGeoMatrix* id = new TGeoHMatrix();
+ TGeoHMatrix transMat = *id * trans;
+ TGeoHMatrix *smTrans = new TGeoHMatrix(transMat);
+
+ trd1[iSM]->AddNode(fm,1,mAtr); //place FM in BTOF
+ trd1[iSM]->AddNode(fm,2,mBtr);
+ trd1[iSM]->AddNode(fm,3,mCtr);
+ trd1[iSM]->AddNode(fm,4,mDtr);
+ top->AddNode(trd1[iSM],1,smTrans); //place BTOF_iSM in ALICE
+ trd1[iSM]->SetVisDaughters();
+ trd1[iSM]->SetLineColor(iSM); //black
+
+ }
+
+ fTOFmgr->CloseGeometry();
+ fTOFmgr->GetTopVolume()->Draw();
+ fTOFmgr->SetVisOption(0);
+ fTOFmgr->SetVisLevel(6);
+
+ // Now Store the "Ideal" Global Matrices (local to global) for later use
+
+ for (Int_t iSM = 0; iSM < 18; iSM++) {
+
+ sprintf(name, "TOP_1/BTOF%d_1", iSM);
+ printf("\n\n***************** TOF SuperModule: %s ****************** \n",name);
+ TGeoPhysicalNode* pn3 = fTOFmgr->MakePhysicalNode(name);
+ fTOFMatrixId[iSM] = pn3->GetMatrix(); //save "ideal" global matrix
+ printf("\n\n*************** The Ideal Matrix in GRS *****************\n");
+ fTOFMatrixId[iSM]->Print();
+
+ }
+}
+
+//_____________________________________________________________________________
+void AliTOFAlignment::InsertMisAlignment(Float_t * const mis)
+{
+ // Now Apply the Displacements and store the misaligned FM positions...
+ //
+ //
+
+ Double_t lA[3]={-fgkXFM, -fgkYFM ,fgkZFM};
+ Double_t lB[3]={fgkXFM, -fgkYFM ,fgkZFM};
+ Double_t lC[3]={fgkXFM, fgkYFM ,fgkZFM};
+ Double_t lD[3]={-fgkXFM, fgkYFM ,fgkZFM};
+
+ for(Int_t iSM=0;iSM<18;iSM++){
+ char name[16];
+ sprintf(name, "TOP_1/BTOF%d_1", iSM);
+ fTOFmgr->cd(name);
+ printf("\n\n******Misaligning TOF SuperModule ************** %s \n",name);
+
+ // ************* get ideal global matrix *******************
+ TGeoHMatrix g3 = *fTOFmgr->GetCurrentMatrix();
+ AliInfo(Form("This is the ideal global trasformation of SM %i",iSM));
+ g3.Print(); // g3 is the local(BTOF) to global (ALICE) matrix and is the same of fTOFMatrixId
+ TGeoNode* n3 = fTOFmgr->GetCurrentNode();
+ TGeoMatrix* l3 = n3->GetMatrix();
+
+ Double_t gA[3], gB[3], gC[3], gD[3]; // ideal global FM point coord.
+ g3.LocalToMaster(lA,gA);
+ g3.LocalToMaster(lB,gB);
+ g3.LocalToMaster(lC,gC);
+ g3.LocalToMaster(lD,gD);
+
+ // We apply a delta transformation to the surveyed vol to represent
+ // its real position, given below by ng3 nl3, which differs from its
+ // ideal position saved above in g3 and l3
+
+ //we have to express the displacements as regards the old local RS (non misaligned BTOF)
+ Double_t dx = mis[0]; // shift along x
+ Double_t dy = mis[1]; // shift along y
+ Double_t dz = mis[2]; // shift along z
+ Double_t dphi = mis[3]; // rot around z
+ Double_t dtheta = mis[4]; // rot around x'
+ Double_t dpsi = mis[5]; // rot around z''
+
+ TGeoRotation* rrot = new TGeoRotation("rot",dphi,dtheta,dpsi);
+ TGeoCombiTrans localdelta = *(new TGeoCombiTrans(dx,dy,dz, rrot));
+ AliInfo(Form("This is the local delta trasformation for SM %i \n",iSM));
+ localdelta.Print();
+ TGeoHMatrix nlocal = *l3 * localdelta;
+ TGeoHMatrix* nl3 = new TGeoHMatrix(nlocal); // new matrix, representing real position (from new local mis RS to the global one)
+
+ TGeoPhysicalNode* pn3 = fTOFmgr->MakePhysicalNode(name);
+
+ pn3->Align(nl3);
+
+ TGeoHMatrix* ng3 = pn3->GetMatrix(); //"real" global matrix, what survey sees
+ printf("\n\n************* The Misaligned Matrix in GRS **************\n");
+ ng3->Print();
+ Double_t ngA[3], ngB[3], ngC[3], ngD[3];// real FM point coord., global RS
+ ng3->LocalToMaster(lA,ngA);
+ ng3->LocalToMaster(lB,ngB);
+ ng3->LocalToMaster(lC,ngC);
+ ng3->LocalToMaster(lD,ngD);
+
+ for(Int_t coord=0;coord<3;coord++){
+ fCombFMData[iSM*4][2*coord]=ngA[coord];
+ fCombFMData[iSM*4][2*coord+1]=1;
+ fCombFMData[iSM*4+1][2*coord]=ngB[coord];
+ fCombFMData[iSM*4+1][2*coord+1]=1;
+ fCombFMData[iSM*4+2][2*coord]=ngC[coord];
+ fCombFMData[iSM*4+2][2*coord+1]=1;
+ fCombFMData[iSM*4+3][2*coord]=ngD[coord];
+ fCombFMData[iSM*4+3][2*coord+1]=1;
+ }
+ }
+
+}
+
+//____________________________________________________________________________
+void AliTOFAlignment::WriteCombData(const Char_t *nomefile, Int_t option)
+{
+ // 1 for simulated data; 0 for data from survey file
+ // write combined data on a file
+ //
+
+ FILE *data;
+ /* Open file in text mode: */
+ if( (data = fopen( nomefile, "w+t" )) != NULL ){
+ if (option==1){
+ fprintf( data, "simulated data\n" );} else {
+ fprintf( data, "survey data\n" );}
+ if (option==1){
+ fprintf( data, "data from InsertMisAlignmentBTOF method\n");}
+ else {fprintf( data, "real survey data from text file (coordinate in global RS)\n");}
+ fprintf( data, "Point Name,XPH,YPH,ZPH,PrecisionX(mm),PrecisionY(mm),PrecisionZ(mm)\n");
+ fprintf( data, "> Data:\n");
+ for(Int_t i=0;i<72;i++){
+ if (fCombFMData[i][0]!=0){
+ fprintf( data, "SM%02iFM%i %f %f %f M Y %f %f %f\n", (i-i%4)/4, i%4, fCombFMData[i][0],fCombFMData[i][2],fCombFMData[i][4],fCombFMData[i][1]*10,fCombFMData[i][3]*10,fCombFMData[i][5]*10);
+ }
+ }
+ fclose( data );
+ }
+ else{
+ printf( "Problem opening the file\n" );
+ }
+
+ return;
+}
+
+//____________________________________________________________________________
+void AliTOFAlignment::WriteSimSurveyData(const Char_t *nomefile)
+{
+ // write sim data in standard format
+ //
+ //
+
+ FILE *data;
+ /* Open file in text mode: */
+ if( (data = fopen( nomefile, "w+t" )) != NULL )
+ {
+ fprintf( data, "> Title:\n" );
+ fprintf( data, "simulated data\n" );
+ fprintf( data, "> Date:\n" );
+ fprintf( data, "24.09.2007\n" );
+ fprintf( data, "> Subdetector:\n" );
+ fprintf( data, "TOF\n" );
+ fprintf( data, "> Report URL:\n" );
+ fprintf( data, "https://edms.cern.ch/document/835615\n" );
+ fprintf( data, "> Version:\n" );
+ fprintf( data, "1\n");
+ fprintf( data, "> General Observations:\n");
+ fprintf( data, "data from InsertMisAlignmentBTOF method\n");
+ fprintf( data, "> Coordinate System:\n");
+ fprintf( data, "\\ALICEPH\n");
+ fprintf( data, "> Units:\n");
+ fprintf( data, "cm\n");
+ fprintf( data, "> Nr Columns:\n");
+ fprintf( data, "9\n");
+ fprintf( data, "> Column Names:\n");
+ fprintf( data, "Point Name,XPH,YPH,ZPH,Point Type,Target Used,PrecisionX(mm),PrecisionY(mm),PrecisionZ(mm)\n");
+ fprintf( data, "> Data:\n");
+ for(Int_t i=0;i<72;i++)
+ if (fCombFMData[i][0]!=0)
+ fprintf( data, "SM%02iFM%i %f %f %f M Y %f %f %f\n", (i-i%4)/4, i%4, fCombFMData[i][0],fCombFMData[i][2],fCombFMData[i][4],fCombFMData[i][1],fCombFMData[i][3],fCombFMData[i][5]);
+
+ fclose( data );
+ }
+ else
+ printf( "Problem opening the file\n" );
+}
+
+//____________________________________________________________________________
+void AliTOFAlignment::MakeDefData(const Int_t nf,TString namefiles[])
+{
+ //this method combines survey data from different files (namefiles[])
+ //
+ //
+
+ Float_t data[72][6][100];
+ for (Int_t i=0;i<72;i++)
+ for (Int_t j=0; j<6; j++)
+ for(Int_t k=0; k<100; k++)
+ data[i][j][k]=0;
+ Int_t nfm=0;
+ Int_t nsm=0;
+ Long64_t totdata[72]={0};
+
+ for (Int_t ii=0;ii<nf; ii++)
+ {
+ AliSurveyObj *so = new AliSurveyObj();
+ const Char_t *nome=namefiles[ii];
+ so->FillFromLocalFile(nome);
+ TObjArray *points = so->GetData();
+ Int_t nSurveyPoint=points->GetEntries();
+ for(Int_t jj=0;jj<nSurveyPoint;jj++){
+ const char* pointName= ((AliSurveyPoint *) points->At(jj))->GetPointName().Data();
+ nfm=atoi(&pointName[6]);
+ nsm=atoi(&pointName[2]);
+ data[nsm*4+nfm][0][totdata[nsm*4+nfm]]=((AliSurveyPoint *) points->At(jj))->GetX();
+ data[nsm*4+nfm][2][totdata[nsm*4+nfm]]=((AliSurveyPoint *) points->At(jj))->GetY();
+ data[nsm*4+nfm][4][totdata[nsm*4+nfm]]=((AliSurveyPoint *) points->At(jj))->GetZ();
+ data[nsm*4+nfm][1][totdata[nsm*4+nfm]]=((AliSurveyPoint *) points->At(jj))->GetPrecisionX();
+ data[nsm*4+nfm][3][totdata[nsm*4+nfm]]=((AliSurveyPoint *) points->At(jj))->GetPrecisionY();
+ data[nsm*4+nfm][5][totdata[nsm*4+nfm]]=((AliSurveyPoint *) points->At(jj))->GetPrecisionZ();
+ totdata[nsm*4+nfm]=totdata[nsm*4+nfm]+1;
+ }
+ delete so;
+ }
+
+
+ for(Int_t i=0; i<72 ;i++){
+ Float_t numx=0, numy=0,numz=0, comodox=0, comodoy=0, comodoz=0,denx=0, deny=0, denz=0;
+ if(totdata[i]!=0){
+ for(Int_t j=0; j<totdata[i]; j++){
+ comodox=1/(data[i][1][j]/10*data[i][1][j]/10);//precision in mm, position in cm
+ numx=numx+data[i][0][j]*comodox;
+ denx=denx+comodox;
+ comodoy=1/(data[i][3][j]/10*data[i][3][j]/10);
+ numy=numy+data[i][2][j]*comodoy;
+ deny=deny+comodoy;
+ comodoz=1/(data[i][5][j]/10*data[i][5][j]/10);
+ numz=numz+data[i][4][j]*comodoz;
+ denz=denz+comodoz;
+ }
+ fCombFMData[i][1]=TMath::Sqrt(1/denx); //error for x position
+ fCombFMData[i][3]=TMath::Sqrt(1/deny); //error for y position
+ fCombFMData[i][5]=TMath::Sqrt(1/denz); //error for z position
+ fCombFMData[i][0]=numx/denx; //combined survey data for x position of FM
+ fCombFMData[i][2]=numy/deny; //combined survey data for y position of FM
+ fCombFMData[i][4]=numz/denz; //combined survey data for z position of FM
+ } else continue;
+ }
+
+ for(Int_t i=0;i<72;i++)
+ if (fCombFMData[i][0]!=0){
+ fNFMforSM[(i-i%4)/4][i%4]=1;
+ fNFMforSM[(i-i%4)/4][4]=fNFMforSM[(i-i%4)/4][4]+1;
+ }
+}
+
+//_____________________________________________________________________________
+void AliTOFAlignment::ReadSurveyDataAndAlign(){
+ //
+ // read the survey data and, if we know the positions of at least 3 FM
+ //for a SM, call the right Alignement procedure
+
+ fTOFAlignObjArray = new TObjArray(kMaxAlignObj);
+
+ Float_t deltaFM0=0, deltaFM1=0, deltaFM2=0, deltaFM3=0;
+
+ for(Int_t i=0; i<18; i++){
+ switch(fNFMforSM[i][4]){
+ case 0:
+ printf("we don't know the position of any FM of SM %i\n",i);
+ break;
+ case 1:
+ printf("we know the position of only one FM for SM %i\n",i);
+
+ break;
+ case 2:
+ printf("we know the position of only 2 FM for SM %i\n",i);
+
+ break;
+ case 3:
+ if (fNFMforSM[i][0]==1 && fNFMforSM[i][1]==1 && fNFMforSM[i][2]==1){
+ printf("we know the position of FM A B C for SM %i\n",i);
+ AliTOFAlignment::AlignFromSurveyABC(i);};
+
+
+ if (fNFMforSM[i][0]==1 && fNFMforSM[i][1]==1 && fNFMforSM[i][3]==1){
+ printf("we know the position of FM A B D for SM %i\n",i);
+ AliTOFAlignment::AlignFromSurveyABD(i);};
+
+
+ if (fNFMforSM[i][0]==1 && fNFMforSM[i][2]==1 && fNFMforSM[i][3]==1){
+ printf("we know the position of FM A C D for SM %i\n",i);
+ AliTOFAlignment::AlignFromSurveyACD(i);};
+
+
+ if (fNFMforSM[i][1]==1 && fNFMforSM[i][2]==1 && fNFMforSM[i][3]==1){
+ printf("we know the position of FM B C D for SM %i\n",i);
+ AliTOFAlignment::AlignFromSurveyBCD(i);};
+
+
+ break;
+ case 4:
+ printf("we know the position of all the 4 FM for SM %i\n",i);
+ //check the precision of the measurement
+
+ deltaFM0=fCombFMData[i*4][1]/TMath::Abs(fCombFMData[i*4][0])+fCombFMData[i*4][3]/TMath::Abs(fCombFMData[i*4][2])+fCombFMData[i*4][5]/TMath::Abs(fCombFMData[i*4][4]);
+ deltaFM1=fCombFMData[i*4+1][1]/TMath::Abs(fCombFMData[i*4+1][0])+fCombFMData[i*4+1][3]/TMath::Abs(fCombFMData[i*4+1][2])+fCombFMData[i*4+1][5]/TMath::Abs(fCombFMData[i*4+1][4]);
+ deltaFM2=fCombFMData[i*4+2][1]/TMath::Abs(fCombFMData[i*4+2][0])+fCombFMData[i*4+2][3]/TMath::Abs(fCombFMData[i*4+2][2])+fCombFMData[i*4+2][5]/TMath::Abs(fCombFMData[i*4+2][4]);
+ deltaFM3=fCombFMData[i*4+3][1]/TMath::Abs(fCombFMData[i*4+3][0])+fCombFMData[i*4+3][3]/TMath::Abs(fCombFMData[i*4+3][2])+fCombFMData[i*4+3][5]/TMath::Abs(fCombFMData[i*4+3][4]);
+
+ //to AlignFromSurvey we use the 3 FM whose positions are known with greatest precision
+ if(deltaFM0>=deltaFM1 && deltaFM0>=deltaFM2 && deltaFM0>=deltaFM3){
+ printf("to Align we use FM B,C,D");
+ AliTOFAlignment::AlignFromSurveyBCD(i);} else
+ if(deltaFM1>=deltaFM0 && deltaFM1>=deltaFM2 && deltaFM1>=deltaFM3){
+ printf("to Align we use FM A,C,D");
+ AliTOFAlignment::AlignFromSurveyACD(i);} else
+ if(deltaFM2>=deltaFM0 && deltaFM2>=deltaFM1 && deltaFM2>=deltaFM3){
+ printf("to Align we use FM A,B,D");
+ AliTOFAlignment::AlignFromSurveyABD(i);} else{
+ printf("to Align we use FM A,B,C");
+ AliTOFAlignment::AlignFromSurveyABC(i);}
+
+ break;
+ }
+
+ }
+
+ // saving TOF AligObjs from survey on a file, for the moment..
+ fNTOFAlignObj=fTOFAlignObjArray->GetEntries();
+ AliInfo(Form("Number of Alignable Volumes: %d",fNTOFAlignObj));
+ TFile f("TOFAlignFromSurvey.root","RECREATE");
+ f.cd();
+ f.WriteObject(fTOFAlignObjArray,"TOFAlignObjs","kSingleKey");
+ f.Close();
+
+
+}
+
+//_____________________________________________________________________________
+void AliTOFAlignment::AlignFromSurveyABC(Int_t iSM)
+{
+
+ //From Survey data, derive the needed transformations to get the
+ //Alignment Objects.
+ //Again, highly "inspired" to Raffaele's example...
+ //we use FM A,B,C
+
+ Double_t ngA[3], ngB[3], ngC[3]; // real FM point coord., global RS
+ // Get the 'realistic' input from the Survey Matrix
+ for(Int_t coord=0;coord<3;coord++){
+ ngA[coord]= fCombFMData[iSM*4][coord*2];
+ ngB[coord]= fCombFMData[iSM*4+1][coord*2];
+ ngC[coord]= fCombFMData[iSM*4+2][coord*2];
+ }
+
+ printf("\n\n******Survey analysis for TOF SuperModule ************** %i \n",iSM);
+
+ // From the real fiducial marks coordinates derive back the
+ // new global position of the surveyed volume
+ //*** What follows is the actual survey-to-alignment procedure
+
+ Double_t ab[3], bc[3], n[3];
+ Double_t plane[4], s=1.;
+
+ // first vector on the plane of the fiducial marks
+ for(Int_t i=0;i<3;i++){
+ ab[i] = (ngB[i] - ngA[i]);
+ }
+
+ // second vector on the plane of the fiducial marks
+ for(Int_t i=0;i<3;i++){
+ bc[i] = (ngC[i] - ngB[i]);
+ }
+
+ // vector normal to the plane of the fiducial marks obtained
+ // as cross product of the two vectors on the plane d0^d1
+ n[0] = (ab[1] * bc[2] - ab[2] * bc[1]);
+ n[1] = (ab[2] * bc[0] - ab[0] * bc[2]);
+ n[2] = (ab[0] * bc[1] - ab[1] * bc[0]);
+
+ Double_t sizen = TMath::Sqrt( n[0]*n[0] + n[1]*n[1] + n[2]*n[2] );
+ if(sizen>1.e-8){
+ s = Double_t(1.)/sizen ; //normalization factor
+ }else{
+ AliInfo("Problem in normalizing the vector");
+ }
+
+ // plane expressed in the hessian normal form, see:
+ // http://mathworld.wolfram.com/HessianNormalForm.html
+ // the first three are the coordinates of the orthonormal vector
+ // the fourth coordinate is equal to the distance from the origin
+
+ for(Int_t i=0;i<3;i++){
+ plane[i] = n[i] * s;
+ }
+ plane[3] = ( plane[0] * ngA[0] + plane[1] * ngA[1] + plane[2] * ngA[2] );
+
+ // The center of the square with fiducial marks as corners
+ // as the middle point of one diagonal - md
+ // Used below to get the center - orig - of the surveyed box
+
+ Double_t orig[3], md[3];
+ for(Int_t i=0;i<3;i++){
+ md[i] = (ngA[i] + ngC[i]) * 0.5;
+ }
+
+ // The center of the box, gives the global translation
+ for(Int_t i=0;i<3;i++){
+ orig[i] = md[i] - plane[i]*fgkZFM;
+ }
+
+ // get local directions needed to write the global rotation matrix
+ // for the surveyed volume by normalising vectors ab and bc
+ Double_t sx = TMath::Sqrt(ab[0]*ab[0] + ab[1]*ab[1] + ab[2]*ab[2]);
+
+
+ if(sx>1.e-8){
+ for(Int_t i=0;i<3;i++){
+ ab[i] /= sx;
+ }
+ }
+ Double_t sy = TMath::Sqrt(bc[0]*bc[0] + bc[1]*bc[1] + bc[2]*bc[2]);
+ if(sy>1.e-8){
+ for(Int_t i=0;i<3;i++){
+ bc[i] /= sy;
+ }
+ }
+ Double_t rot[9] = {ab[0],bc[0],plane[0],ab[1],bc[1],plane[1],ab[2],bc[2],plane[2]}; // the rotation matrix
+ // the Aligned matrix for the current TOF SM in the Global RS, as derived from Survey
+ TGeoHMatrix ng;
+ ng.SetTranslation(orig);
+ ng.SetRotation(rot);
+ printf("\n\n**** The Misaligned Matrix in GRS, as from Survey data ***\n");
+ ng.Print();
+
+ // Calculate the delta transformation wrt Ideal geometry
+ // (Should be gdelta.rot ==I and gdelta.tr=0 if no misalignment is applied.)
+
+ printf("\n\n**** The ideal matrix ***\n");
+ fTOFMatrixId[iSM]->Print();
+
+ TGeoHMatrix gdelta =fTOFMatrixId[iSM]->Inverse();
+ printf("\n\n**** The inverse of the ideal matrix ***\n");
+ gdelta.Print();
+
+ gdelta.MultiplyLeft(&ng);
+ printf("\n\n**** The Delta Matrix in GRS, as from Survey data ***\n");
+ gdelta.Print(); //this is the global delta trasformation
+
+ // Now Write the Alignment Objects....
+ Int_t index=0; //let all SM modules have index=0
+ AliGeomManager::ELayerID layer = AliGeomManager::kInvalidLayer;
+ UShort_t dvoluid = AliGeomManager::LayerToVolUID(layer,index); //dummy vol id
+ TString symname(Form("TOF/sm%02d",iSM));
+ AliAlignObjMatrix* o = new AliAlignObjMatrix(symname.Data(),dvoluid,gdelta,kTRUE);
+ fTOFAlignObjArray->Add(o);
+
+ }
+
+
+//_____________________________________________________________________________
+void AliTOFAlignment::AlignFromSurveyABD(Int_t iSM)
+{
+
+ //From Survey data, derive the needed transformations to get the
+ //Alignment Objects.
+ //Again, highly "inspired" to Raffaele's example...
+ //we use FM A,B,D
+
+ Double_t ngA[3], ngB[3], ngD[3];// real FM point coord., global RS
+
+ // Get the 'realistic' input from the Survey Matrix
+ for(Int_t coord=0;coord<3;coord++){
+ ngA[coord]= fCombFMData[iSM*4][coord*2];
+ ngB[coord]= fCombFMData[iSM*4+1][coord*2];
+ ngD[coord]= fCombFMData[iSM*4+3][coord*2];
+ }
+
+ printf("\n\n******Survey analysis for TOF SuperModule ************** %i \n",iSM);
+
+ // From the new fiducial marks coordinates derive back the
+ // new global position of the surveyed volume
+ //*** What follows is the actual survey-to-alignment procedure
+
+ Double_t ab[3], ad[3], n[3];
+ Double_t plane[4], s=1.;
+
+ // first vector on the plane of the fiducial marks
+ for(Int_t i=0;i<3;i++){
+ ab[i] = (ngB[i] - ngA[i]);
+ }
+
+ // second vector on the plane of the fiducial marks
+ for(Int_t i=0;i<3;i++){
+ ad[i] = (ngD[i] - ngA[i]);
+ }
+
+ // vector normal to the plane of the fiducial marks obtained
+ // as cross product of the two vectors on the plane d0^d1
+ n[0] = (ab[1] * ad[2] - ab[2] * ad[1]);
+ n[1] = (ab[2] * ad[0] - ab[0] * ad[2]);
+ n[2] = (ab[0] * ad[1] - ab[1] * ad[0]);
+
+ Double_t sizen = TMath::Sqrt( n[0]*n[0] + n[1]*n[1] + n[2]*n[2] );
+ if(sizen>1.e-8){
+ s = Double_t(1.)/sizen ; //normalization factor
+ }else{
+ AliInfo("Problem in normalizing the vector");
+ }
+
+ // plane expressed in the hessian normal form, see:
+ // http://mathworld.wolfram.com/HessianNormalForm.html
+ // the first three are the coordinates of the orthonormal vector
+ // the fourth coordinate is equal to the distance from the origin
+
+ for(Int_t i=0;i<3;i++){
+ plane[i] = n[i] * s;
+ }
+ plane[3] = ( plane[0] * ngA[0] + plane[1] * ngA[1] + plane[2] * ngA[2] );
+
+ // The center of the square with fiducial marks as corners
+ // as the middle point of one diagonal - md
+ // Used below to get the center - orig - of the surveyed box
+
+ Double_t orig[3], md[3];
+ for(Int_t i=0;i<3;i++){
+ md[i] = (ngB[i] + ngD[i]) * 0.5;
+ }
+
+ // The center of the box, gives the global translation
+ for(Int_t i=0;i<3;i++){
+ orig[i] = md[i] - plane[i]*fgkZFM;
+ }
+
+ // get local directions needed to write the global rotation matrix
+ // for the surveyed volume by normalising vectors ab and bc
+ Double_t sx = TMath::Sqrt(ab[0]*ab[0] + ab[1]*ab[1] + ab[2]*ab[2]);
+ if(sx>1.e-8){
+ for(Int_t i=0;i<3;i++){
+ ab[i] /= sx;
+ }
+ }
+ Double_t sy = TMath::Sqrt(ad[0]*ad[0] + ad[1]*ad[1] + ad[2]*ad[2]);
+ if(sy>1.e-8){
+ for(Int_t i=0;i<3;i++){
+ ad[i] /= sy;
+ }
+ }
+ Double_t rot[9] = {ab[0],ad[0],plane[0],ab[1],ad[1],plane[1],ab[2],ad[2],plane[2]};
+ // the Aligned matrix for the current TOF SM in the Global RS, as derived from Survey:
+ TGeoHMatrix ng;
+ ng.SetTranslation(orig);
+ ng.SetRotation(rot);
+ printf("\n\n**** The Misaligned Matrix in GRS, as from Survey data ***\n");
+ ng.Print();
+
+ // Calculate the delta transformation wrt Ideal geometry
+ // (Should be gdelta.rot ==I and gdelta.tr=0 if no misalignment is applied.)
+
+ printf("\n\n**** The ideal matrix ***\n");
+ fTOFMatrixId[iSM]->Print();
+
+ TGeoHMatrix gdelta =fTOFMatrixId[iSM]->Inverse();
+ printf("\n\n**** The inverse of the ideal matrix ***\n");
+ gdelta.Print();
+
+ gdelta.MultiplyLeft(&ng);
+ printf("\n\n**** The Delta Matrix in GRS, as from Survey data ***\n");
+ gdelta.Print(); //global delta trasformation
+
+ // Now Write the Alignment Objects....
+ Int_t index=0; //let all SM modules have index=0
+ AliGeomManager::ELayerID layer = AliGeomManager::kInvalidLayer;
+ UShort_t dvoluid = AliGeomManager::LayerToVolUID(layer,index); //dummy vol id
+ TString symname(Form("TOF/sm%02d",iSM));
+ AliAlignObjMatrix* o = new AliAlignObjMatrix(symname.Data(),dvoluid,gdelta,kTRUE);
+ fTOFAlignObjArray->Add(o);
+
+ }
+//_____________________________________________________________________________
+void AliTOFAlignment::AlignFromSurveyACD(Int_t iSM)
+{
+ //From Survey data, derive the needed transformations to get the
+ //Alignment Objects.
+ //Again, highly "inspired" to Raffaele's example...
+ //we use FM A,C,D
+
+
+ Double_t ngA[3], ngC[3], ngD[3];// real FM point coord., global RS
+
+ // Get the 'realistic' input from the Survey Matrix
+ for(Int_t coord=0;coord<3;coord++){
+ ngA[coord]= fCombFMData[iSM*4][coord*2];
+ ngC[coord]= fCombFMData[iSM*4+2][coord*2];
+ ngD[coord]= fCombFMData[iSM*4+3][coord*2];
+ }
+
+ printf("\n\n******Survey analysis for TOF SuperModule ************** %i \n",iSM);
+
+ // From the new fiducial marks coordinates derive back the
+ // new global position of the surveyed volume
+ //*** What follows is the actual survey-to-alignment procedure
+
+ Double_t cd[3], ad[3], n[3];
+ Double_t plane[4], s=1.;
+
+ // first vector on the plane of the fiducial marks
+ for(Int_t i=0;i<3;i++){
+ cd[i] = (ngC[i] - ngD[i]);
+ }
+
+ // second vector on the plane of the fiducial marks
+ for(Int_t i=0;i<3;i++){
+ ad[i] = (ngD[i] - ngA[i]);
+ }
+
+ // vector normal to the plane of the fiducial marks obtained
+ // as cross product of the two vectors on the plane d0^d1
+ n[0] = (ad[1] * cd[2] - ad[2] * cd[1]);
+ n[1] = (ad[2] * cd[0] - ad[0] * cd[2]);
+ n[2] = (ad[0] * cd[1] - ad[1] * cd[0]);
+
+ Double_t sizen = TMath::Sqrt( n[0]*n[0] + n[1]*n[1] + n[2]*n[2] );
+ if(sizen>1.e-8){
+ s = Double_t(1.)/sizen ; //normalization factor
+ }else{
+ AliInfo("Problem in normalizing the vector");
+ }
+
+ // plane expressed in the hessian normal form, see:
+ // http://mathworld.wolfram.com/HessianNormalForm.html
+ // the first three are the coordinates of the orthonormal vector
+ // the fourth coordinate is equal to the distance from the origin
+
+ for(Int_t i=0;i<3;i++){
+ plane[i] = n[i] * s;
+ }
+ plane[3] = ( plane[0] * ngA[0] + plane[1] * ngA[1] + plane[2] * ngA[2] );
+
+ // The center of the square with fiducial marks as corners
+ // as the middle point of one diagonal - md
+ // Used below to get the center - orig - of the surveyed box
+
+ Double_t orig[3], md[3];
+ for(Int_t i=0;i<3;i++){
+ md[i] = (ngA[i] + ngC[i]) * 0.5;
+ }
+
+ // The center of the box, gives the global translation
+ for(Int_t i=0;i<3;i++){
+ orig[i] = md[i] + plane[i]*fgkZFM;
+ }
+
+ // get local directions needed to write the global rotation matrix
+ // for the surveyed volume by normalising vectors ab and bc
+ Double_t sx = TMath::Sqrt(ad[0]*ad[0] + ad[1]*ad[1] + ad[2]*ad[2]);
+ if(sx>1.e-8){
+ for(Int_t i=0;i<3;i++){
+ ad[i] /= sx;
+ }
+ }
+ Double_t sy = TMath::Sqrt(cd[0]*cd[0] + cd[1]*cd[1] + cd[2]*cd[2]);
+ if(sy>1.e-8){
+ for(Int_t i=0;i<3;i++){
+ cd[i] /= sy;
+ }
+ }
+ Double_t rot[9] = {cd[0],ad[0],-plane[0],cd[1],ad[1],-plane[1],cd[2],ad[2],-plane[2]};
+ // the Aligned matrix for the current TOF SM in the Global RS, as derived from Survey:
+ TGeoHMatrix ng;
+ ng.SetTranslation(orig);
+ ng.SetRotation(rot);
+ printf("\n\n**** The Misaligned Matrix in GRS, as from Survey data ***\n");
+ ng.Print();
+
+ // Calculate the delta transformation wrt Ideal geometry
+ // (Should be gdelta.rot ==I and gdelta.tr=0 if no misalignment is applied.)
+
+ printf("\n\n**** The ideal matrix ***\n");
+ fTOFMatrixId[iSM]->Print();
+
+ TGeoHMatrix gdelta =fTOFMatrixId[iSM]->Inverse();
+ printf("\n\n**** The inverse of the ideal matrix ***\n");
+ gdelta.Print();
+
+ gdelta.MultiplyLeft(&ng);
+ printf("\n\n**** The Delta Matrix in GRS, as from Survey data ***\n");
+ gdelta.Print(); //global delta trasformation
+
+ // Now Write the Alignment Objects....
+ Int_t index=0; //let all SM modules have index=0
+ AliGeomManager::ELayerID layer = AliGeomManager::kInvalidLayer;
+ UShort_t dvoluid = AliGeomManager::LayerToVolUID(layer,index); //dummy vol id
+ TString symname(Form("TOF/sm%02d",iSM));
+ AliAlignObjMatrix* o = new AliAlignObjMatrix(symname.Data(),dvoluid,gdelta,kTRUE);
+ fTOFAlignObjArray->Add(o);
+ }
+
+//___________________________________________________________________________
+void AliTOFAlignment::AlignFromSurveyBCD(Int_t iSM)
+{
+ //From Survey data, derive the needed transformations to get the
+ //Alignment Objects.
+ //Again, highly "inspired" to Raffaele's example...
+ //we use FM B,C,D
+
+ Double_t ngB[3], ngC[3], ngD[3];// real FM point coord., global RS
+
+
+ // Get the 'realistic' input from the Survey Matrix
+ for(Int_t coord=0;coord<3;coord++){
+ ngB[coord]= fCombFMData[iSM*4+1][coord*2];
+ ngC[coord]= fCombFMData[iSM*4+2][coord*2];
+ ngD[coord]= fCombFMData[iSM*4+3][coord*2];
+ }
+
+ printf("\n\n******Survey analysis for TOF SuperModule ************** %i \n",iSM);
+
+ // From the new fiducial marks coordinates derive back the
+ // new global position of the surveyed volume
+ //*** What follows is the actual survey-to-alignment procedure
+
+ Double_t cd[3], bc[3], n[3];
+ Double_t plane[4], s=1.;
+
+ // first vector on the plane of the fiducial marks
+ for(Int_t i=0;i<3;i++){
+ cd[i] = (ngC[i] - ngD[i]);
+ }
+
+ // second vector on the plane of the fiducial marks
+ for(Int_t i=0;i<3;i++){
+ bc[i] = (ngC[i] - ngB[i]);
+ }
+
+ // vector normal to the plane of the fiducial marks obtained
+ // as cross product of the two vectors on the plane d0^d1
+ n[0] = (bc[1] * cd[2] - bc[2] * cd[1]);
+ n[1] = (bc[2] * cd[0] - bc[0] * cd[2]);
+ n[2] = (bc[0] * cd[1] - bc[1] * cd[0]);
+
+ Double_t sizen = TMath::Sqrt( n[0]*n[0] + n[1]*n[1] + n[2]*n[2] );
+ if(sizen>1.e-8){
+ s = Double_t(1.)/sizen ; //normalization factor
+ }else{
+ AliInfo("Problem in normalizing the vector");
+ }
+
+ // plane expressed in the hessian normal form, see:
+ // http://mathworld.wolfram.com/HessianNormalForm.html
+ // the first three are the coordinates of the orthonormal vector
+ // the fourth coordinate is equal to the distance from the origin
+
+ for(Int_t i=0;i<3;i++){
+ plane[i] = n[i] * s;
+ }
+ plane[3] = ( plane[0] * ngB[0] + plane[1] * ngB[1] + plane[2] * ngB[2] );
+
+ // The center of the square with fiducial marks as corners
+ // as the middle point of one diagonal - md
+ // Used below to get the center - orig - of the surveyed box
+
+ Double_t orig[3], md[3];
+ for(Int_t i=0;i<3;i++){
+ md[i] = (ngB[i] + ngD[i]) * 0.5;
+ }
+
+ // The center of the box, gives the global translation
+ for(Int_t i=0;i<3;i++){
+ orig[i] = md[i] + plane[i]*fgkZFM;
+ }
+
+ // get local directions needed to write the global rotation matrix
+ // for the surveyed volume by normalising vectors ab and bc
+ Double_t sx = TMath::Sqrt(cd[0]*cd[0] + cd[1]*cd[1] + cd[2]*cd[2]);
+ if(sx>1.e-8){
+ for(Int_t i=0;i<3;i++){
+ cd[i] /= sx;
+ }
+ }
+ Double_t sy = TMath::Sqrt(bc[0]*bc[0] + bc[1]*bc[1] + bc[2]*bc[2]);
+ if(sy>1.e-8){
+ for(Int_t i=0;i<3;i++){
+ bc[i] /= sy;
+ }
+ }
+ Double_t rot[9] = {cd[0],bc[0],-plane[0],cd[1],bc[1],-plane[1],cd[2],bc[2],-plane[2]};
+ // the Aligned matrix for the current TOF SM in the Global RS, as derived from Survey:
+ TGeoHMatrix ng;
+ ng.SetTranslation(orig);
+ ng.SetRotation(rot);
+ printf("\n\n**** The Misaligned Matrix in GRS, as from Survey data ***\n");
+ ng.Print();
+
+ // Calculate the delta transformation wrt Ideal geometry
+ // (Should be gdelta.rot ==I and gdelta.tr=0 if no misalignment is applied.)
+
+ printf("\n\n**** The ideal matrix ***\n");
+ fTOFMatrixId[iSM]->Print();
+
+ TGeoHMatrix gdelta =fTOFMatrixId[iSM]->Inverse();
+ printf("\n\n**** The inverse of the ideal matrix ***\n");
+ gdelta.Print();
+
+ gdelta.MultiplyLeft(&ng);
+ printf("\n\n**** The Delta Matrix in GRS, as from Survey data ***\n");
+ gdelta.Print(); //global delta trasformation
+
+ // Now Write the Alignment Objects....
+ Int_t index=0; //let all SM modules have index=0
+ AliGeomManager::ELayerID layer = AliGeomManager::kInvalidLayer;
+ UShort_t dvoluid = AliGeomManager::LayerToVolUID(layer,index); //dummy vol id
+ TString symname(Form("TOF/sm%02d",iSM));
+ AliAlignObjMatrix* o = new AliAlignObjMatrix(symname.Data(),dvoluid,gdelta,kTRUE);
+ fTOFAlignObjArray->Add(o);
+ }
+
+