#include "TH1F.h"
#include "TH2F.h"
#include "TArrayI.h"
+
//
//
#include "AliTPCCalROC.h"
fSector(0),
fNChannels(0),
fNRows(0),
- fIndexes(0),
+ fkIndexes(0),
fData(0)
{
//
fSector(0),
fNChannels(0),
fNRows(0),
- fIndexes(0),
+ fkIndexes(0),
fData(0)
{
//
fSector = sector;
fNChannels = AliTPCROC::Instance()->GetNChannels(fSector);
fNRows = AliTPCROC::Instance()->GetNRows(fSector);
- fIndexes = AliTPCROC::Instance()->GetRowIndexes(fSector);
+ fkIndexes = AliTPCROC::Instance()->GetRowIndexes(fSector);
fData = new Float_t[fNChannels];
for (UInt_t idata = 0; idata< fNChannels; idata++) fData[idata] = 0.;
}
fSector(0),
fNChannels(0),
fNRows(0),
- fIndexes(0),
+ fkIndexes(0),
fData(0)
{
//
fSector = c.fSector;
fNChannels = AliTPCROC::Instance()->GetNChannels(fSector);
fNRows = AliTPCROC::Instance()->GetNRows(fSector);
- fIndexes = AliTPCROC::Instance()->GetRowIndexes(fSector);
+ fkIndexes = AliTPCROC::Instance()->GetRowIndexes(fSector);
//
fData = new Float_t[fNChannels];
for (UInt_t idata = 0; idata< fNChannels; idata++) fData[idata] = c.fData[idata];
//
if (R__b.IsReading()) {
AliTPCCalROC::Class()->ReadBuffer(R__b, this);
- fIndexes = AliTPCROC::Instance()->GetRowIndexes(fSector);
+ fkIndexes = AliTPCROC::Instance()->GetRowIndexes(fSector);
} else {
AliTPCCalROC::Class()->WriteBuffer(R__b,this);
}
}
}
-Double_t AliTPCCalROC::GetMean(AliTPCCalROC* outlierROC) {
+Double_t AliTPCCalROC::GetMean(AliTPCCalROC *const outlierROC) const {
//
// returns the mean value of the ROC
// pads with value != 0 in outlierROC are not used for the calculation
+ // return 0 if no data is accepted by the outlier cuts
//
if (!outlierROC) return TMath::Mean(fNChannels, fData);
Double_t *ddata = new Double_t[fNChannels];
- Int_t NPoints = 0;
+ Int_t nPoints = 0;
for (UInt_t i=0;i<fNChannels;i++) {
if (!(outlierROC->GetValue(i))) {
- ddata[NPoints]= fData[NPoints];
- NPoints++;
+ ddata[nPoints]= fData[i];
+ nPoints++;
}
}
- Double_t mean = TMath::Mean(NPoints, ddata);
+ Double_t mean = 0;
+ if(nPoints>0)
+ mean = TMath::Mean(nPoints, ddata);
delete [] ddata;
return mean;
}
-Double_t AliTPCCalROC::GetMedian(AliTPCCalROC* outlierROC) {
+Double_t AliTPCCalROC::GetMedian(AliTPCCalROC *const outlierROC) const {
//
// returns the median value of the ROC
// pads with value != 0 in outlierROC are not used for the calculation
+ // return 0 if no data is accepted by the outlier cuts
//
if (!outlierROC) return TMath::Median(fNChannels, fData);
Double_t *ddata = new Double_t[fNChannels];
- Int_t NPoints = 0;
+ Int_t nPoints = 0;
for (UInt_t i=0;i<fNChannels;i++) {
if (!(outlierROC->GetValue(i))) {
- ddata[NPoints]= fData[NPoints];
- NPoints++;
+ ddata[nPoints]= fData[i];
+ nPoints++;
}
}
- Double_t mean = TMath::Median(NPoints, ddata);
+ Double_t median = 0;
+ if(nPoints>0)
+ median = TMath::Median(nPoints, ddata);
delete [] ddata;
- return mean;
+ return median;
}
-Double_t AliTPCCalROC::GetRMS(AliTPCCalROC* outlierROC) {
+Double_t AliTPCCalROC::GetRMS(AliTPCCalROC *const outlierROC) const {
//
// returns the RMS value of the ROC
// pads with value != 0 in outlierROC are not used for the calculation
+ // return 0 if no data is accepted by the outlier cuts
//
if (!outlierROC) return TMath::RMS(fNChannels, fData);
Double_t *ddata = new Double_t[fNChannels];
- Int_t NPoints = 0;
+ Int_t nPoints = 0;
for (UInt_t i=0;i<fNChannels;i++) {
if (!(outlierROC->GetValue(i))) {
- ddata[NPoints]= fData[NPoints];
- NPoints++;
+ ddata[nPoints]= fData[i];
+ nPoints++;
}
}
- Double_t mean = TMath::RMS(NPoints, ddata);
+ Double_t rms = 0;
+ if(nPoints>0)
+ rms = TMath::RMS(nPoints, ddata);
delete [] ddata;
- return mean;
+ return rms;
}
-Double_t AliTPCCalROC::GetLTM(Double_t *sigma, Double_t fraction, AliTPCCalROC* outlierROC){
+Double_t AliTPCCalROC::GetLTM(Double_t *const sigma, Double_t fraction, AliTPCCalROC *const outlierROC){
//
// returns the LTM and sigma
// pads with value != 0 in outlierROC are not used for the calculation
+ // return 0 if no data is accepted by the outlier cuts
//
Double_t *ddata = new Double_t[fNChannels];
- Double_t mean=0, lsigma=0;
- UInt_t NPoints = 0;
+ UInt_t nPoints = 0;
for (UInt_t i=0;i<fNChannels;i++) {
if (!outlierROC || !(outlierROC->GetValue(i))) {
- ddata[NPoints]= fData[NPoints];
- NPoints++;
+ ddata[nPoints]= fData[i];
+ nPoints++;
}
}
- Int_t hh = TMath::Min(TMath::Nint(fraction *NPoints), Int_t(NPoints));
- AliMathBase::EvaluateUni(NPoints,ddata, mean, lsigma, hh);
- if (sigma) *sigma=lsigma;
+
+ Double_t ltm =0, lsigma=0;
+ if(nPoints>0) {
+ Int_t hh = TMath::Min(TMath::Nint(fraction *nPoints), Int_t(nPoints));
+ AliMathBase::EvaluateUni(nPoints,ddata, ltm, lsigma, hh);
+ if (sigma) *sigma=lsigma;
+ }
+
delete [] ddata;
- return mean;
+ return ltm;
}
TH1F * AliTPCCalROC::MakeHisto1D(Float_t min, Float_t max,Int_t type){
// chi2Threshold: Threshold for chi2 when EvalRobust is called
// robustFraction: Fraction of data that will be used in EvalRobust
//
- AliTPCCalROC * ROCfitted = new AliTPCCalROC(fSector);
+ AliTPCCalROC * xROCfitted = new AliTPCCalROC(fSector);
TLinearFitter fitterQ(6,"hyp5");
// TLinearFitter fitterQ(6,"x0++x1++x2++x3++x4++x5");
fitterQ.StoreData(kTRUE);
for (UInt_t row=0; row < GetNrows(); row++) {
//std::cout << "Entering row " << row << " of " << GetNrows() << " @ sector "<< fSector << " for local fitting... "<< std::endl;
for (UInt_t pad=0; pad < GetNPads(row); pad++)
- ROCfitted->SetValue(row, pad, GetNeighbourhoodValue(&fitterQ, row, pad, rowRadius, padRadius, ROCoutliers, robust, chi2Threshold, robustFraction));
+ xROCfitted->SetValue(row, pad, GetNeighbourhoodValue(&fitterQ, row, pad, rowRadius, padRadius, ROCoutliers, robust, chi2Threshold, robustFraction));
}
- return ROCfitted;
+ return xROCfitted;
}
-Double_t AliTPCCalROC::GetNeighbourhoodValue(TLinearFitter* fitterQ, Int_t row, Int_t pad, Int_t rRadius, Int_t pRadius, AliTPCCalROC* ROCoutliers, Bool_t robust, Double_t chi2Threshold, Double_t robustFraction) {
+Double_t AliTPCCalROC::GetNeighbourhoodValue(TLinearFitter* fitterQ, Int_t row, Int_t pad, Int_t rRadius, Int_t pRadius, AliTPCCalROC *const ROCoutliers, Bool_t robust, Double_t chi2Threshold, Double_t robustFraction) {
//
// AliTPCCalROC::GetNeighbourhoodValue - smoothing - PRIVATE
// in this function the fit for LocalFit is done
pmax = pmax - pmin;
pmin = 0;
}
- if (pmax >= GetNPads(r)) {
+ if (pmax >= (Int_t)GetNPads(r)) {
pmin = pmin - (pmax - GetNPads(r)+1);
pmax = GetNPads(r) - 1;
if (pmin < 0 ) pmin = 0; // if the window is bigger than the ROC
-void AliTPCCalROC::GlobalFit(const AliTPCCalROC* ROCoutliers, Bool_t robust, TVectorD &fitParam, TMatrixD &covMatrix, Float_t & chi2, Int_t fitType, Double_t chi2Threshold, Double_t robustFraction){
+void AliTPCCalROC::GlobalFit(const AliTPCCalROC* ROCoutliers, Bool_t robust, TVectorD &fitParam, TMatrixD &covMatrix, Float_t & chi2, Int_t fitType, Double_t chi2Threshold, Double_t robustFraction, Double_t err){
//
// Makes a GlobalFit for the given secotr and return fit-parameters, covariance and chi2
// The origin of the fit function is the center of the ROC!
// ROCoutliers - pads with value !=0 are not used in fitting procedure
// chi2Threshold: Threshold for chi2 when EvalRobust is called
// robustFraction: Fraction of data that will be used in EvalRobust
+ // err: error of the data points
//
TLinearFitter* fitterG = 0;
Double_t xx[6];
- if (fitType == 1)
+ if (fitType == 1) {
fitterG = new TLinearFitter (6,"x0++x1++x2++x3++x4++x5");
- else
+ fitParam.ResizeTo(6);
+ covMatrix.ResizeTo(6,6);
+ } else {
fitterG = new TLinearFitter(3,"x0++x1++x2");
+ fitParam.ResizeTo(3);
+ covMatrix.ResizeTo(3,3);
+ }
fitterG->StoreData(kTRUE);
fitterG->ClearPoints();
Int_t npoints=0;
tpcROCinstance->GetPositionLocal(fSector, GetNrows()/2, GetNPads(GetNrows()/2)/2, centerPad); // calculate center of ROC
// loop over all channels and read data into fitterG
- if (fitType == 1) { // parabolic fit
- fitParam.ResizeTo(6);
- covMatrix.ResizeTo(6,6);
- for (UInt_t irow = 0; irow < GetNrows(); irow++) {
- for (UInt_t ipad = 0; ipad < GetNPads(irow); ipad++) {
- // fill fitterG
- tpcROCinstance->GetPositionLocal(fSector, irow, ipad, localXY); // calculate position localXY by pad and row number
- dlx = centerPad[0] - localXY[0];
- dly = centerPad[1] - localXY[1];
- xx[0] = 1;
- xx[1] = dlx;
- xx[2] = dly;
- xx[3] = dlx*dlx;
- xx[4] = dly*dly;
- xx[5] = dlx*dly;
- if (!ROCoutliers || ROCoutliers->GetValue(irow, ipad) != 1) {
- npoints++;
- fitterG->AddPoint(xx, GetValue(irow, ipad), 1);
- }
- }
- }
- }
- else { // linear fit
- fitParam.ResizeTo(3);
- covMatrix.ResizeTo(3,3);
- for (UInt_t irow = 0; irow < GetNrows(); irow++) {
- for (UInt_t ipad = 0; ipad < GetNPads(irow); ipad++) {
- // fill fitterG
- tpcROCinstance->GetPositionLocal(fSector, irow, ipad, localXY); // calculate position localXY by pad and row number
- dlx = centerPad[0] - localXY[0];
- dly = centerPad[1] - localXY[1];
- xx[0] = 1;
- xx[1] = dlx;
- xx[2] = dly;
- if (!ROCoutliers || ROCoutliers->GetValue(irow, ipad) != 1) {
- npoints++;
- fitterG->AddPoint(xx, GetValue(irow, ipad), 1);
- }
- }
+ for (UInt_t irow = 0; irow < GetNrows(); irow++) {
+ for (UInt_t ipad = 0; ipad < GetNPads(irow); ipad++) {
+ // fill fitterG
+ if (ROCoutliers && ROCoutliers->GetValue(irow, ipad) != 0) continue;
+ tpcROCinstance->GetPositionLocal(fSector, irow, ipad, localXY); // calculate position localXY by pad and row number
+ dlx = localXY[0] - centerPad[0];
+ dly = localXY[1] - centerPad[1];
+ xx[0] = 1;
+ xx[1] = dlx;
+ xx[2] = dly;
+ xx[3] = dlx*dlx;
+ xx[4] = dly*dly;
+ xx[5] = dlx*dly;
+ npoints++;
+ fitterG->AddPoint(xx, GetValue(irow, ipad), err);
}
}
- fitterG->Eval();
- fitterG->GetParameters(fitParam);
- fitterG->GetCovarianceMatrix(covMatrix);
- if (fitType == 1)
- chi2 = fitterG->GetChisquare()/(npoints-6.);
- else chi2 = fitterG->GetChisquare()/(npoints-3.);
- if (robust && chi2 > chi2Threshold) {
- // std::cout << "robust fitter called... " << std::endl;
- fitterG->EvalRobust(robustFraction);
+ if(npoints>10) { // make sure there is something to fit
+ fitterG->Eval();
fitterG->GetParameters(fitParam);
+ fitterG->GetCovarianceMatrix(covMatrix);
+ if (fitType == 1)
+ chi2 = fitterG->GetChisquare()/(npoints-6.);
+ else chi2 = fitterG->GetChisquare()/(npoints-3.);
+ if (robust && chi2 > chi2Threshold) {
+ // std::cout << "robust fitter called... " << std::endl;
+ fitterG->EvalRobust(robustFraction);
+ fitterG->GetParameters(fitParam);
+ }
+ } else {
+ // set parameteres to 0
+ Int_t nParameters = 3;
+ if (fitType == 1)
+ nParameters = 6;
+
+ for(Int_t i = 0; i < nParameters; i++)
+ fitParam[i] = 0;
}
+
delete fitterG;
}
Float_t dlx, dly;
Float_t centerPad[3] = {0};
Float_t localXY[3] = {0};
- AliTPCCalROC * ROCfitted = new AliTPCCalROC(sector);
+ AliTPCCalROC * xROCfitted = new AliTPCCalROC(sector);
AliTPCROC* tpcROCinstance = AliTPCROC::Instance();
- tpcROCinstance->GetPositionLocal(sector, ROCfitted->GetNrows()/2, ROCfitted->GetNPads(ROCfitted->GetNrows()/2)/2, centerPad); // calculate center of ROC
+ tpcROCinstance->GetPositionLocal(sector, xROCfitted->GetNrows()/2, xROCfitted->GetNPads(xROCfitted->GetNrows()/2)/2, centerPad); // calculate center of ROC
Int_t fitType = 1;
if (fitParam.GetNoElements() == 6) fitType = 1;
else fitType = 0;
Double_t value = 0;
if (fitType == 1) { // parabolic fit
- for (UInt_t irow = 0; irow < ROCfitted->GetNrows(); irow++) {
- for (UInt_t ipad = 0; ipad < ROCfitted->GetNPads(irow); ipad++) {
+ for (UInt_t irow = 0; irow < xROCfitted->GetNrows(); irow++) {
+ for (UInt_t ipad = 0; ipad < xROCfitted->GetNPads(irow); ipad++) {
tpcROCinstance->GetPositionLocal(sector, irow, ipad, localXY); // calculate position localXY by pad and row number
- dlx = centerPad[0] - localXY[0];
- dly = centerPad[1] - localXY[1];
+ dlx = localXY[0] - centerPad[0];
+ dly = localXY[1] - centerPad[1];
value = fitParam[0] + fitParam[1]*dlx + fitParam[2]*dly + fitParam[3]*dlx*dlx + fitParam[4]*dly*dly + fitParam[5]*dlx*dly;
- ROCfitted->SetValue(irow, ipad, value);
+ xROCfitted->SetValue(irow, ipad, value);
}
}
}
else { // linear fit
- for (UInt_t irow = 0; irow < ROCfitted->GetNrows(); irow++) {
- for (UInt_t ipad = 0; ipad < ROCfitted->GetNPads(irow); ipad++) {
+ for (UInt_t irow = 0; irow < xROCfitted->GetNrows(); irow++) {
+ for (UInt_t ipad = 0; ipad < xROCfitted->GetNPads(irow); ipad++) {
tpcROCinstance->GetPositionLocal(sector, irow, ipad, localXY); // calculate position localXY by pad and row number
- dlx = centerPad[0] - localXY[0];
- dly = centerPad[1] - localXY[1];
+ dlx = localXY[0] - centerPad[0];
+ dly = localXY[1] - centerPad[1];
value = fitParam[0] + fitParam[1]*dlx + fitParam[2]*dly;
- ROCfitted->SetValue(irow, ipad, value);
+ xROCfitted->SetValue(irow, ipad, value);
}
}
}
- return ROCfitted;
+ return xROCfitted;
}
-
git://git.uio.no / u / mrichter / AliRoot.git / blobdiff