counter++;
if (counter<startFile) continue;
if (counter>maxFiles+startFile) break;
- chain->Add(currentFile.Data());
+ TFile * f = TFile::Open(currentFile.Data());
+ if (f){
+ chain->Add(currentFile.Data());
+ }
+ delete f;
}
in.close();
-//______________________________________________________________________________
-void AliXRDPROOFtoolkit::CheckFiles (const char*fileIn, Int_t checkLevel, const char*treeToRetrieve, const char*varexp, const char*selection)
-{
- //
- // check the files
- //
- fstream fic;
- fic.open(fileIn, ios_base::in);
- fstream focGood;
- fstream focBad;
- focGood.open(Form("%s.Good",fileIn), ios_base::out|ios_base::trunc);
- focBad.open(Form("%s.Bad",fileIn), ios_base::out|ios_base::trunc);
- //
- if(!fic.is_open()) {
- cout<<"Can't open file "<<fileIn<<endl;
- return;
- }
- //
- //
- //
- Long64_t size;
- char buffer[256];
- char * line;
- char * machine;
- Int_t level=0;
- Float_t compressionFactor;
- Int_t nkey;
- Int_t version;
- TObjString * fileName=0x0;
- TObjString * machineName=0x0;
- // TChain chain ("check_chain");
-
- TFile fout(Form("%s.root",fileIn),"recreate");
- TTree * tree=new TTree("stats", "stats of AliXRDPROOFtoolkit::CheckFiles function");
-
- tree->Branch ("machine", "TObjString", &machineName, 256000,0);
- tree->Branch ("file", "TObjString", &fileName, 256000,0);
- tree->Branch ("level", &level, "level/I");
- tree->Branch ("size", &size, "size/L");
- tree->Branch ("nkey", &nkey, "nkey/I");
- tree->Branch ("compress", &compressionFactor, "compress/F");
- tree->Branch ("version", &version, "version/I");
-
- // start loop over the files
- fic.getline(buffer, sizeof(buffer));
- while (fic.good()){
-
- // get the machine name if present in the file
- machine=strchr(buffer, '\t');
- if(machine!=0x0){
- machine[0]='\0';
- line=machine+1;
- machine=buffer;
- machineName=new TObjString(machine);
- }else {
- machineName=new TObjString("x");
- line=buffer;
- }
- cout<<"Inspecting file :"<<line<<endl;
-
-
- TTree * getTree=0x0;
- fileName=new TObjString(line);
-
- TFile * f=TFile::Open(line);
- // chain.AddFile(line);
- level=0;
- size=-1;
- nkey=-1;
- compressionFactor=-1;
- version=-1;
-
- if (fileName->String().Contains("AliESDs.root")){
- //
- // check friend file
- //
- char fnameFriend[1000];
- sprintf(fnameFriend,"%s/AliESDfriends.root",gSystem->DirName(fileName->String().Data()));
- cout<<"Inspecting file :"<<fnameFriend<<endl;
- TFile * ffriend=TFile::Open(fnameFriend);
- if (!ffriend) level=-4;
- else{
- if (ffriend->IsZombie()) level=-3;
- if (ffriend->TestBit(TFile::kRecovered) || ffriend->TestBit(TFile::kWriteError)){
- level=-2;
- }
- ffriend->Close();
- delete ffriend;
- }
- }
-
-
- if(level>=-1 && f!=0x0){
- level=1;
- size=f->GetSize();
- nkey=f->GetNkeys();
- compressionFactor=f->GetCompressionFactor();
- version=f->GetVersion();
-
- if(checkLevel>0 && !f->IsZombie()){
- level=2;
- if(checkLevel>1 && (getTree=(TTree*)f->Get(treeToRetrieve))!=0x0){
- level=3;
- Int_t tentries = getTree->GetEntries();
- if (tentries>=0) level=4;
- cout<<"Number of entries :"<<getTree->GetEntries()<<endl;
-
- if(checkLevel>3 &&tentries>0) {
- getTree->SetBranchStatus("*",1);
- try{
- TH1F his("his","his",100,-1,1);
- Int_t selected = getTree->Draw(Form("%s>>his",varexp), selection, "goff", 1, tentries-1);
- cout<<"Selected\t"<<selected<<endl;
- if(selected>-1){
- level=5;
-
- //try to remove the created histogrames ...
-// TH1F *htemp = (TH1F*)gPad->GetPrimitive("htemp"); // 1D
-// TGraph *graph = (TGraph*)gPad->GetPrimitive("Graph"); // 2D
-// if(htemp!=0x0) {cout<<"removing TH1D"<<endl; delete htemp;}
-// else if(graph!=0x0) {cout<<"removing TGraph"<<endl; delete graph;}
-// else cout<<"nothing to remove : memory leak ..."<<endl;
-
- }
- }catch(std::bad_alloc){
- cout<<"Warning : Draw option send std::badalloc"<<endl;
- }
- }
- delete getTree;
- }
- }
- f->Close();
- delete f;
- }
- if (level>checkLevel){
- focGood<<line<<endl;
- }
- else{
- focBad<<line<<"\t"<<level<<endl;
- }
-
-
- tree->Fill();
- fic.getline(buffer, sizeof(buffer));
- }
-
- //now use chain to check
- //chain.Lookup(kTRUE);
-
-
- // Save the tree
- tree->Write();
- fout.Close();
- focGood.close();
- focBad.close();
-
-}
Int_t AliXRDPROOFtoolkit::CheckTreeInFile(const char*fileName,const char*treeName, Int_t debugLevel, const char *branchName){
//
for (Int_t i=0; i<array->GetEntries(); i+=2){
char fname[1000];
if (!isZip){
- sprintf(fname, "%s/%s",dirname,array->At(i)->GetName());
+ snprintf(fname,1000, "%s/%s",dirname,array->At(i)->GetName());
if (((TObjString*)array->At(i))->String().Contains("*")){
- sprintf(fname, "%s", currentFile.Data());
+ snprintf(fname,1000, "%s", currentFile.Data());
}
}
if (isZip) {
const char * fileName = gSystem->BaseName(currentFile.Data());
TString fstring=fileName;
fstring[fstring.First("#")]=0;
- sprintf(fname, "%s/%s#%s",dirname,fstring.Data(),array->At(i)->GetName());
+ snprintf(fname,1000, "%s/%s#%s",dirname,fstring.Data(),array->At(i)->GetName());
printf(fname, "To check %s%s#%s\n",dirname,fstring.Data(),array->At(i)->GetName());
}
for (Int_t i=0; i<array->GetEntries(); i+=2){
char fname[1000];
//if (isZip) sprintf(fname,
- sprintf(fname, "%s/%s#%s",dirname,fstring.Data(),array->At(i)->GetName());
+ snprintf(fname,1000, "%s/%s#%s",dirname,fstring.Data(),array->At(i)->GetName());
printf(fname, "To check %s%s#%s\n",dirname,fstring.Data(),array->At(i)->GetName());
//cout <<"\n arguments: "<< array->At(i+1)->GetName()<<" "<<checkLevel<<endl;
Int_t cstatus = CheckTreeInFile(fname, array->At(i+1)->GetName(), checkLevel,0);
char outfile[1000];
Bool_t succes=kTRUE;
for (Int_t ifile =0; ifile<nfiles; ifile++){
- sprintf(infile,"%s/%s", idir, array->At(ifile)->GetName());
- sprintf(outfile,"%s/%s", odir, array->At(ifile)->GetName());
+ snprintf(infile,1000,"%s/%s", idir, array->At(ifile)->GetName());
+ snprintf(outfile,1000,"%s/%s", odir, array->At(ifile)->GetName());
printf("%s - %s\n",infile, outfile);
Bool_t result = TFile::Cp(infile,outfile);
succes &= result;
git://git.uio.no / u / mrichter / AliRoot.git / blobdiff