#include "AliTRDdataArrayF.h"
#include "AliTRDdataArrayI.h"
#include "AliTRDdataArrayS.h"
+#include "AliTRDdataArrayDigits.h"
#include "AliTRDdigitsManager.h"
#include "AliTRDrawData.h"
#include "AliTRDcalibDB.h"
// AliTRDclusterizer destructor
//
+ printf("----> AliTRDclusterizer::dtor\n");
+
if (fRecPoints)
{
fRecPoints->Delete();
for (Int_t i = 0; i < AliTRDgeometry::kNdet; i++)
{
- AliTRDdataArrayS *digitsIn = (AliTRDdataArrayS *) fDigitsManager->GetDigits(i);
+ AliTRDdataArrayDigits *digitsIn = (AliTRDdataArrayDigits*) fDigitsManager->GetDigits(i);
// This is to take care of switched off super modules
if (!digitsIn->HasData())
{
}
+//_____________________________________________________________________________
+UChar_t AliTRDclusterizer::GetStatus(Short_t &signal)
+{
+ UChar_t status = 0;
+ // check if pad is masked
+ if(signal>0 && TESTBIT(signal, 10)){
+ CLRBIT(signal, 10);
+ for(int ibit=0; ibit<4; ibit++){
+ if(TESTBIT(signal, 11+ibit)){
+ SETBIT(status, ibit);
+ CLRBIT(signal, 11+ibit);
+ }
+ }
+ }
+ return status;
+}
+
//_____________________________________________________________________________
Bool_t AliTRDclusterizer::MakeClusters(Int_t det)
{
// Get the digits
// digits should be expanded beforehand!
// digitsIn->Expand();
- AliTRDdataArrayS *digitsIn = (AliTRDdataArrayS *) fDigitsManager->GetDigits(det);
-
+ AliTRDdataArrayDigits *digitsIn = (AliTRDdataArrayDigits *) fDigitsManager->GetDigits(det);
+
// This is to take care of switched off super modules
if (!digitsIn->HasData())
{
UShort_t volid = AliGeomManager::LayerToVolUID(ilayer,imodule);
Int_t nColMax = digitsIn->GetNcol();
+ Int_t nRowMax = digitsIn->GetNrow();
Int_t nTimeTotal = digitsIn->GetNtime();
// Detector wise calibration object for the gain factors
// Calibration value for chamber wise gain factor
Float_t calGainFactorDetValue = calGainFactorDet->GetValue(idet);
- // Calibration object with the pad status information
- AliTRDCalSingleChamberStatus *calPadStatusROC = calibration->GetPadStatusROC(idet);
-
Int_t nClusters = 0;
- AliTRDdataArrayF *digitsOut = new AliTRDdataArrayF(digitsIn->GetNrow()
- ,digitsIn->GetNcol()
- ,digitsIn->GetNtime());
+ AliTRDdataArrayF *digitsOut = new AliTRDdataArrayF(nRowMax, nColMax, nTimeTotal);
+ AliTRDdataArrayS padStatus(nRowMax, nColMax, nTimeTotal);
ResetHelperIndexes(indexesIn);
// Apply the gain and the tail cancelation via digital filter
TailCancelation(digitsIn
- ,digitsOut
- ,indexesIn
- ,fIndexesOut
- ,nTimeTotal
- ,adcThreshold
- ,calGainFactorROC
- ,calGainFactorDetValue);
+ ,digitsOut
+ ,indexesIn
+ ,fIndexesOut
+ ,nTimeTotal
+ ,adcThreshold
+ ,calGainFactorROC
+ ,calGainFactorDetValue);
Int_t row = 0;
Int_t col = 0;
Int_t time = 0;
Int_t iPad = 0;
+ UChar_t status[3]={0, 0, 0}, ipos = 0;
fIndexesOut->ResetCounters();
- while (fIndexesOut->NextRCTbinIndex(row, col, time))
- {
-
- Float_t signalM = TMath::Abs(digitsOut->GetDataUnchecked(row,col,time));
-
- // Look for the maximum
- if (signalM >= maxThresh)
- {
-
- if (col + 1 >= nColMax || col-1 < 0)
- continue;
-
- Float_t signalL = TMath::Abs(digitsOut->GetDataUnchecked(row,col+1,time));
- Float_t signalR = TMath::Abs(digitsOut->GetDataUnchecked(row,col-1,time));
-
- if ((TMath::Abs(signalL) <= signalM) &&
- (TMath::Abs(signalR) < signalM))
- {
- if ((TMath::Abs(signalL) >= sigThresh) ||
- (TMath::Abs(signalR) >= sigThresh))
- {
- // Maximum found, mark the position by a negative signal
- digitsOut->SetDataUnchecked(row,col,time,-signalM);
- fIndexesMaxima->AddIndexTBin(row,col,time);
- }
- }
-
- }
-
+ while (fIndexesOut->NextRCTbinIndex(row, col, time)){
+ Float_t signalM = TMath::Abs(digitsOut->GetDataUnchecked(row,col,time));
+ status[1] = digitsIn->GetPadStatus(row,col,time);
+ if(status[1]) SETBIT(ipos, AliTRDcluster::kMaskedCenter);
+
+ // Look for the maximum
+ if (signalM >= maxThresh) {
+ if (col + 1 >= nColMax || col-1 < 0) continue;
+
+ Float_t signalL = TMath::Abs(digitsOut->GetDataUnchecked(row,col+1,time));
+ status[0] = digitsIn->GetPadStatus(row,col+1,time);
+ if(status[0]) SETBIT(ipos, AliTRDcluster::kMaskedLeft);
+
+ Float_t signalR = TMath::Abs(digitsOut->GetDataUnchecked(row,col-1,time));
+ status[2] = digitsIn->GetPadStatus(row,col-1,time);
+ if(status[2]) SETBIT(ipos, AliTRDcluster::kMaskedRight);
+
+ // reject candidates with more than 1 problematic pad
+ if(ipos == 3 || ipos > 4) continue;
+
+ if(!status[1]){ // good central pad
+ if(!ipos){ // all pads are OK
+ if ((signalL <= signalM) && (signalR < signalM)) {
+ if ((signalL >= sigThresh) || (signalR >= sigThresh)) {
+ // Maximum found, mark the position by a negative signal
+ digitsOut->SetDataUnchecked(row,col,time,-signalM);
+ fIndexesMaxima->AddIndexTBin(row,col,time);
+ padStatus.SetDataUnchecked(row, col, time, ipos);
+ }
+ }
+ } else { // one of the neighbouring pads are bad
+ if(status[0] && signalR < signalM && signalR >= sigThresh){
+ digitsOut->SetDataUnchecked(row,col,time,-signalM);
+ digitsOut->SetDataUnchecked(row, col, time+1, 0.);
+ fIndexesMaxima->AddIndexTBin(row,col,time);
+ padStatus.SetDataUnchecked(row, col, time, ipos);
+ } else if(status[2] && signalL <= signalM && signalL >= sigThresh){
+ digitsOut->SetDataUnchecked(row,col,time,-signalM);
+ digitsOut->SetDataUnchecked(row, col, time-1, 0.);
+ fIndexesMaxima->AddIndexTBin(row,col,time);
+ padStatus.SetDataUnchecked(row, col, time, ipos);
+ }
+ }
+ } else { // wrong maximum pad
+ if ((signalL >= sigThresh) || (signalR >= sigThresh)) {
+ // Maximum found, mark the position by a negative signal
+ digitsOut->SetDataUnchecked(row,col,time,-maxThresh);
+ fIndexesMaxima->AddIndexTBin(row,col,time);
+ padStatus.SetDataUnchecked(row, col, time, ipos);
+ }
+ }
+ }
}
-
- // The index to the first cluster of a given ROC
- Int_t firstClusterROC = -1;
- // The number of cluster in a given ROC
- Int_t nClusterROC = 0;
-
- // Now check the maxima and calculate the cluster position
- fIndexesMaxima->ResetCounters();
- while (fIndexesMaxima->NextRCTbinIndex(row, col, time))
- {
- // Maximum found ?
- if (digitsOut->GetDataUnchecked(row,col,time) < 0.0)
- {
+ // The index to the first cluster of a given ROC
+ Int_t firstClusterROC = -1;
+ // The number of cluster in a given ROC
+ Int_t nClusterROC = 0;
- for (iPad = 0; iPad < kNclus; iPad++)
- {
- Int_t iPadCol = col - 1 + iPad;
- clusterSignal[iPad] = TMath::Abs(digitsOut->GetDataUnchecked(row,iPadCol,time));
- }
+ // Now check the maxima and calculate the cluster position
+ fIndexesMaxima->ResetCounters();
+ while (fIndexesMaxima->NextRCTbinIndex(row, col, time)) {
- // Count the number of pads in the cluster
- Int_t nPadCount = 0;
- Int_t ii;
- // Look to the left
- ii = 0;
- while (TMath::Abs(digitsOut->GetDataUnchecked(row,col-ii ,time)) >= sigThresh)
- {
- nPadCount++;
- ii++;
- if (col-ii < 0) break;
- }
- // Look to the right
- ii = 0;
- while (TMath::Abs(digitsOut->GetDataUnchecked(row,col+ii+1,time)) >= sigThresh)
- {
- nPadCount++;
- ii++;
- if (col+ii+1 >= nColMax) break;
- }
- nClusters++;
-
- // Look for 5 pad cluster with minimum in the middle
- Bool_t fivePadCluster = kFALSE;
- if (col < (nColMax - 3))
- {
- if (digitsOut->GetDataUnchecked(row,col+2,time) < 0)
- {
- fivePadCluster = kTRUE;
- }
- if ((fivePadCluster) && (col < (nColMax - 5)))
- {
- if (digitsOut->GetDataUnchecked(row,col+4,time) >= sigThresh)
- {
- fivePadCluster = kFALSE;
- }
- }
- if ((fivePadCluster) && (col > 1))
- {
- if (digitsOut->GetDataUnchecked(row,col-2,time) >= sigThresh)
- {
- fivePadCluster = kFALSE;
- }
- }
- }
-
- // 5 pad cluster
- // Modify the signal of the overlapping pad for the left part
- // of the cluster which remains from a previous unfolding
- if (iUnfold)
- {
- clusterSignal[0] *= ratioLeft;
- iUnfold = 0;
- }
+ // Maximum found ?
+ if (digitsOut->GetDataUnchecked(row,col,time) < 0.0) {
+ for (iPad = 0; iPad < kNclus; iPad++) {
+ Int_t iPadCol = col - 1 + iPad;
+ clusterSignal[iPad] = TMath::Abs(digitsOut->GetDataUnchecked(row,iPadCol,time));
+ }
- // Unfold the 5 pad cluster
- if (fivePadCluster)
- {
- for (iPad = 0; iPad < kNsig; iPad++)
- {
- padSignal[iPad] = TMath::Abs(digitsOut->GetDataUnchecked(row
- ,col-1+iPad
- ,time));
- }
- // Unfold the two maxima and set the signal on
- // the overlapping pad to the ratio
- ratioRight = Unfold(kEpsilon,iplan,padSignal);
- ratioLeft = 1.0 - ratioRight;
- clusterSignal[2] *= ratioRight;
- iUnfold = 1;
- }
+ // Count the number of pads in the cluster
+ Int_t nPadCount = 0;
+ Int_t ii;
+ // Look to the left
+ ii = 0;
+ while (TMath::Abs(digitsOut->GetDataUnchecked(row,col-ii ,time)) >= sigThresh) {
+ nPadCount++;
+ ii++;
+ if (col-ii < 0) break;
+ }
+ // Look to the right
+ ii = 0;
+ while (TMath::Abs(digitsOut->GetDataUnchecked(row,col+ii+1,time)) >= sigThresh){
+ nPadCount++;
+ ii++;
+ if (col+ii+1 >= nColMax) break;
+ }
+ nClusters++;
+
+ // Look for 5 pad cluster with minimum in the middle
+ Bool_t fivePadCluster = kFALSE;
+ if (col < (nColMax - 3)){
+ if (digitsOut->GetDataUnchecked(row,col+2,time) < 0) {
+ fivePadCluster = kTRUE;
+ }
+ if ((fivePadCluster) && (col < (nColMax - 5))) {
+ if (digitsOut->GetDataUnchecked(row,col+4,time) >= sigThresh){
+ fivePadCluster = kFALSE;
+ }
+ }
+ if ((fivePadCluster) && (col > 1)){
+ if (digitsOut->GetDataUnchecked(row,col-2,time) >= sigThresh){
+ fivePadCluster = kFALSE;
+ }
+ }
+ }
- // The position of the cluster in COL direction relative to the center pad (pad units)
- Double_t clusterPosCol = 0.0;
- if (AliTRDReconstructor::RecoParam()->LUTOn())
- {
- // Calculate the position of the cluster by using the
- // lookup table method
- clusterPosCol = LUTposition(iplan,clusterSignal[0]
- ,clusterSignal[1]
- ,clusterSignal[2]);
- }
- else
- {
- // Calculate the position of the cluster by using the
- // center of gravity method
- for (Int_t i = 0; i < kNsig; i++)
- {
- padSignal[i] = 0.0;
- }
- padSignal[2] = TMath::Abs(digitsOut->GetDataUnchecked(row,col ,time)); // Central pad
- padSignal[1] = TMath::Abs(digitsOut->GetDataUnchecked(row,col-1,time)); // Left pad
- padSignal[3] = TMath::Abs(digitsOut->GetDataUnchecked(row,col+1,time)); // Right pad
- if ((col > 2) &&
- (TMath::Abs(digitsOut->GetDataUnchecked(row,col-2,time)) < padSignal[1]))
- {
- padSignal[0] = TMath::Abs(digitsOut->GetDataUnchecked(row,col-2,time));
- }
- if ((col < nColMax - 3) &&
- (TMath::Abs(digitsOut->GetDataUnchecked(row,col+2,time)) < padSignal[3]))
- {
- padSignal[4] = TMath::Abs(digitsOut->GetDataUnchecked(row,col+2,time));
- }
- clusterPosCol = GetCOG(padSignal);
- }
+ // 5 pad cluster
+ // Modify the signal of the overlapping pad for the left part
+ // of the cluster which remains from a previous unfolding
+ if (iUnfold) {
+ clusterSignal[0] *= ratioLeft;
+ iUnfold = 0;
+ }
- // Store the amplitudes of the pads in the cluster for later analysis
- // and check whether one of these pads is masked in the database
- Short_t signals[7] = { 0, 0, 0, 0, 0, 0, 0 };
- Bool_t hasMasked = kFALSE;
- for (Int_t jPad = col-3; jPad <= col+3; jPad++)
- {
- if ((jPad < 0) ||
- (jPad >= nColMax-1))
- {
- continue;
- }
- signals[jPad-col+3] = TMath::Nint(TMath::Abs(digitsOut->GetDataUnchecked(row,jPad,time)));
- if (calPadStatusROC->IsMasked(jPad,row)) {
- hasMasked = kTRUE;
- }
- }
+ // Unfold the 5 pad cluster
+ if (fivePadCluster){
+ for (iPad = 0; iPad < kNsig; iPad++) {
+ padSignal[iPad] = TMath::Abs(digitsOut->GetDataUnchecked(row
+ ,col-1+iPad
+ ,time));
+ }
+ // Unfold the two maxima and set the signal on
+ // the overlapping pad to the ratio
+ ratioRight = Unfold(kEpsilon,iplan,padSignal);
+ ratioLeft = 1.0 - ratioRight;
+ clusterSignal[2] *= ratioRight;
+ iUnfold = 1;
+ }
- // Transform the local cluster coordinates into calibrated
- // space point positions defined in the local tracking system.
- // Here the calibration for T0, Vdrift and ExB is applied as well.
- Double_t clusterXYZ[6];
- clusterXYZ[0] = clusterPosCol;
- clusterXYZ[1] = clusterSignal[0];
- clusterXYZ[2] = clusterSignal[1];
- clusterXYZ[3] = clusterSignal[2];
- clusterXYZ[4] = 0.0;
- clusterXYZ[5] = 0.0;
- Int_t clusterRCT[3];
- clusterRCT[0] = row;
- clusterRCT[1] = col;
- clusterRCT[2] = 0;
-
- Bool_t out = kTRUE;
- if (fTransform->Transform(clusterXYZ, clusterRCT, ((UInt_t) time), out, 0)) {
-
- // Add the cluster to the output array
- // The track indices will be stored later
- Float_t clusterPos[3];
- clusterPos[0] = clusterXYZ[0];
- clusterPos[1] = clusterXYZ[1];
- clusterPos[2] = clusterXYZ[2];
- Float_t clusterSig[2];
- clusterSig[0] = clusterXYZ[4];
- clusterSig[1] = clusterXYZ[5];
- Double_t clusterCharge = clusterXYZ[3];
- Char_t clusterTimeBin = ((Char_t) clusterRCT[2]);
- AliTRDcluster *cluster = new AliTRDcluster(idet
- ,clusterCharge
- ,clusterPos
- ,clusterSig
- ,0x0
- ,((Char_t) nPadCount)
- ,signals
- ,((UChar_t) col)
- ,((UChar_t) row)
- ,((UChar_t) time)
- ,clusterTimeBin
- ,clusterPosCol
- ,volid);
- cluster->SetInChamber(!out);
- cluster->SetMaskedPad(hasMasked);
-
- // Temporarily store the row, column and time bin of the center pad
- // Used to later on assign the track indices
- cluster->SetLabel( row,0);
- cluster->SetLabel( col,1);
- cluster->SetLabel(time,2);
+ // The position of the cluster in COL direction relative to the center pad (pad units)
+ Double_t clusterPosCol = 0.0;
+ if (AliTRDReconstructor::RecoParam()->LUTOn()) {
+ // Calculate the position of the cluster by using the
+ // lookup table method
+ clusterPosCol = LUTposition(iplan,clusterSignal[0]
+ ,clusterSignal[1]
+ ,clusterSignal[2]);
+ } else {
+ // Calculate the position of the cluster by using the
+ // center of gravity method
+ for (Int_t i = 0; i < kNsig; i++) {
+ padSignal[i] = 0.0;
+ }
+ padSignal[2] = TMath::Abs(digitsOut->GetDataUnchecked(row,col ,time)); // Central pad
+ padSignal[1] = TMath::Abs(digitsOut->GetDataUnchecked(row,col-1,time)); // Left pad
+ padSignal[3] = TMath::Abs(digitsOut->GetDataUnchecked(row,col+1,time)); // Right pad
+
+ if ((col > 2) &&
+ (TMath::Abs(digitsOut->GetDataUnchecked(row,col-2,time)) < padSignal[1])) {
+ padSignal[0] = TMath::Abs(digitsOut->GetDataUnchecked(row,col-2,time));
+ }
+ if ((col < nColMax - 3) &&
+ (TMath::Abs(digitsOut->GetDataUnchecked(row,col+2,time)) < padSignal[3])){
+ padSignal[4] = TMath::Abs(digitsOut->GetDataUnchecked(row,col+2,time));
+ }
+ clusterPosCol = GetCOG(padSignal);
+ }
- RecPoints()->Add(cluster);
+ // Store the amplitudes of the pads in the cluster for later analysis
+ // and check whether one of these pads is masked in the database
+ Short_t signals[7] = { 0, 0, 0, 0, 0, 0, 0 };
+ for (Int_t jPad = col-3; jPad <= col+3; jPad++) {
+ if ((jPad < 0) ||
+ (jPad >= nColMax-1)) {
+ continue;
+ }
+ signals[jPad-col+3] = TMath::Nint(TMath::Abs(digitsOut->GetDataUnchecked(row,jPad,time)));
+ }
- // Store the index of the first cluster in the current ROC
- if (firstClusterROC < 0)
- {
- firstClusterROC = RecPoints()->GetEntriesFast() - 1;
- }
+ // Transform the local cluster coordinates into calibrated
+ // space point positions defined in the local tracking system.
+ // Here the calibration for T0, Vdrift and ExB is applied as well.
+ Double_t clusterXYZ[6];
+ clusterXYZ[0] = clusterPosCol;
+ clusterXYZ[1] = clusterSignal[0];
+ clusterXYZ[2] = clusterSignal[1];
+ clusterXYZ[3] = clusterSignal[2];
+ clusterXYZ[4] = 0.0;
+ clusterXYZ[5] = 0.0;
+ Int_t clusterRCT[3];
+ clusterRCT[0] = row;
+ clusterRCT[1] = col;
+ clusterRCT[2] = 0;
+
+ Bool_t out = kTRUE;
+ if (fTransform->Transform(clusterXYZ, clusterRCT, ((UInt_t) time), out, 0)) {
+
+ // Add the cluster to the output array
+ // The track indices will be stored later
+ Float_t clusterPos[3];
+ clusterPos[0] = clusterXYZ[0];
+ clusterPos[1] = clusterXYZ[1];
+ clusterPos[2] = clusterXYZ[2];
+ Float_t clusterSig[2];
+ clusterSig[0] = clusterXYZ[4];
+ clusterSig[1] = clusterXYZ[5];
+ Double_t clusterCharge = clusterXYZ[3];
+ Char_t clusterTimeBin = ((Char_t) clusterRCT[2]);
+ AliTRDcluster *cluster = new AliTRDcluster(idet
+ ,clusterCharge
+ ,clusterPos
+ ,clusterSig
+ ,0x0
+ ,((Char_t) nPadCount)
+ ,signals
+ ,((UChar_t) col)
+ ,((UChar_t) row)
+ ,((UChar_t) time)
+ ,clusterTimeBin
+ ,clusterPosCol
+ ,volid);
+ cluster->SetInChamber(!out);
+ UChar_t maskPosition = padStatus.GetDataUnchecked(row, col, time);
+ if(maskPosition){
+ cluster->SetPadMaskedPosition(maskPosition);
+
+ if(maskPosition & AliTRDcluster::kMaskedLeft) cluster->SetPadMaskedStatus(status[0]);
+ else if(maskPosition & AliTRDcluster::kMaskedCenter) cluster->SetPadMaskedStatus(status[1]);
+ else cluster->SetPadMaskedStatus(status[2]);
+ }
- // Count the number of cluster in the current ROC
- nClusterROC++;
+ // Temporarily store the row, column and time bin of the center pad
+ // Used to later on assign the track indices
+ cluster->SetLabel( row,0);
+ cluster->SetLabel( col,1);
+ cluster->SetLabel(time,2);
+
+ RecPoints()->Add(cluster);
- } // if: Transform ok ?
+ // Store the index of the first cluster in the current ROC
+ if (firstClusterROC < 0) {
+ firstClusterROC = RecPoints()->GetEntriesFast() - 1;
+ }
- } // if: Maximum found ?
+ // Count the number of cluster in the current ROC
+ nClusterROC++;
- }
+ } // if: Transform ok ?
+ } // if: Maximum found ?
+ }
delete digitsOut;
- if (fAddLabels)
- {
- AddLabels(idet, firstClusterROC, nClusterROC);
- }
+ if (fAddLabels) AddLabels(idet, firstClusterROC, nClusterROC);
// Write the cluster and reset the array
WriteClusters(idet);
}
//_____________________________________________________________________________
-void AliTRDclusterizer::TailCancelation(AliTRDdataArrayS *digitsIn
+void AliTRDclusterizer::TailCancelation(AliTRDdataArrayDigits *digitsIn
, AliTRDdataArrayF *digitsOut
, AliTRDSignalIndex *indexesIn
, AliTRDSignalIndex *indexesOut
Double_t gain = calGainFactorDetValue
* calGainFactorROCValue;
+ Bool_t corrupted = kFALSE;
for (iTime = 0; iTime < nTimeTotal; iTime++)
{
// Apply gain gain factor
inADC[iTime] = digitsIn->GetDataUnchecked(iRow,iCol,iTime);
+ if(digitsIn->GetPadStatus(iRow, iCol, iTime)) corrupted = kTRUE;
inADC[iTime] /= gain;
outADC[iTime] = inADC[iTime];
}
-
- // Apply the tail cancelation via the digital filter
- if (AliTRDReconstructor::RecoParam()->TCOn())
- {
- DeConvExp(inADC,outADC,nTimeTotal,AliTRDReconstructor::RecoParam()->GetTCnexp());
- }
+ if(!corrupted)
+ {
+ // Apply the tail cancelation via the digital filter
+ // (only for non-coorupted pads)
+ if (AliTRDReconstructor::RecoParam()->TCOn())
+ {
+ DeConvExp(inADC,outADC,nTimeTotal,AliTRDReconstructor::RecoParam()->GetTCnexp());
+ }
+ }
indexesIn->ResetTbinCounter();
while (indexesIn->NextTbinIndex(iTime))
git://git.uio.no / u / mrichter / AliRoot.git / blobdiff