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[u/mrichter/AliRoot.git] / TRD / AliTRDtracker.cxx
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  * provided "as is" without express or implied warranty.                  *
  **************************************************************************/
                                                       
-/*
-$Log$
-Revision 1.7  2000/12/08 16:07:02  cblume
-Update of the tracking by Sergei
+/* $Id$ */
 
-Revision 1.6  2000/11/30 17:38:08  cblume
-Changes to get in line with new STEER and EVGEN
-
-Revision 1.5  2000/11/14 14:40:27  cblume
-Correction for the Sun compiler (kTRUE and kFALSE)
-
-Revision 1.4  2000/11/10 14:57:52  cblume
-Changes in the geometry constants for the DEC compiler
-
-Revision 1.3  2000/10/15 23:40:01  cblume
-Remove AliTRDconst
-
-Revision 1.2  2000/10/06 16:49:46  cblume
-Made Getters const
-
-Revision 1.1.2.2  2000/10/04 16:34:58  cblume
-Replace include files by forward declarations
-
-Revision 1.1.2.1  2000/09/22 14:47:52  cblume
-Add the tracking code
-
-*/   
-
-#include <iostream.h>
+///////////////////////////////////////////////////////////////////////////////
+//                                                                           //
+//  The standard TRD tracker                                                 //  
+//  Based on Kalman filltering approach                                      //
+//                                                                           //
+///////////////////////////////////////////////////////////////////////////////
 
+#include <Riostream.h>
 #include <TFile.h>
-#include <TROOT.h>
 #include <TBranch.h>
-#include <TTree.h>
+#include <TTree.h>  
+#include <TObjArray.h> 
 
-#include "AliRun.h"
-#include "AliTRD.h"
 #include "AliTRDgeometry.h"
-#include "AliTRDrecPoint.h" 
+#include "AliTRDpadPlane.h"
+#include "AliTRDgeometry.h"
 #include "AliTRDcluster.h" 
 #include "AliTRDtrack.h"
-#include "AliTRDtrackingSector.h"
-#include "AliTRDtimeBin.h"
+#include "AliTRDseed.h"
+#include "AliESD.h"
+
+#include "AliTRDcalibDB.h"
+#include "AliTRDCommonParam.h"
 
+#include "TTreeStream.h"
+#include "TGraph.h"
 #include "AliTRDtracker.h"
+#include "TLinearFitter.h"
+#include "AliRieman.h"
+#include "AliTrackPointArray.h"
+#include "AliAlignObj.h"
+#include "AliTRDReconstructor.h"
 
 ClassImp(AliTRDtracker) 
 
-  const  Int_t     AliTRDtracker::fSeedGap            = 35;  
-  const  Int_t     AliTRDtracker::fSeedStep           = 5;   
-
-
-  const  Float_t   AliTRDtracker::fMinClustersInTrack = 0.5;  
-  const  Float_t   AliTRDtracker::fMinClustersInSeed  = 0.5;  
-  const  Float_t   AliTRDtracker::fSeedDepth          = 0.5; 
-  const  Float_t   AliTRDtracker::fSkipDepth          = 0.2;
-  const  Float_t   AliTRDtracker::fMaxSeedDeltaZ      = 30.;  
-  const  Float_t   AliTRDtracker::fMaxSeedC           = 0.01; 
-  const  Float_t   AliTRDtracker::fMaxSeedTan         = 1.2;  
-  const  Float_t   AliTRDtracker::fMaxSeedVertexZ     = 200.; 
-  const  Float_t   AliTRDtracker::fLabelFraction      = 0.5;  
-  const  Float_t   AliTRDtracker::fWideRoad           = 30.;
+  const  Float_t     AliTRDtracker::fgkMinClustersInTrack = 0.5;  
+  const  Float_t     AliTRDtracker::fgkLabelFraction      = 0.8;  
+  const  Double_t    AliTRDtracker::fgkMaxChi2            = 12.; 
+  const  Double_t    AliTRDtracker::fgkMaxSnp             = 0.95; // correspond to tan = 3
+  const  Double_t    AliTRDtracker::fgkMaxStep            = 2.;   // maximal step size in propagation 
 
-  const  Double_t  AliTRDtracker::fMaxChi2            = 12.; 
-  const  Double_t  AliTRDtracker::fSeedErrorSY        = 0.1;
-  const  Double_t  AliTRDtracker::fSeedErrorSY3       = 2.5;
-  const  Double_t  AliTRDtracker::fSeedErrorSZ        = 0.1;
-
-//____________________________________________________________________
-AliTRDtracker::AliTRDtracker()
+//_____________________________________________________________________________
+AliTRDtracker::AliTRDtracker():AliTracker(),
+                              fGeom(0),
+                              fNclusters(0),
+                              fClusters(0),
+                              fNseeds(0),
+                              fSeeds(0),
+                              fNtracks(0),
+                              fTracks(0),
+                              fTimeBinsPerPlane(0),
+                              fAddTRDseeds(kFALSE),
+                              fNoTilt(kFALSE)
 {
   //
   // Default constructor
-  //   
-
-  fEvent     = 0;
-  fGeom      = NULL;
+  //
 
-  fNclusters = 0;
-  fClusters  = NULL; 
-  fNseeds    = 0;
-  fSeeds     = NULL;
-  fNtracks   = 0;
-  fTracks    = NULL;
+  for(Int_t i=0;i<kTrackingSectors;i++) fTrSec[i]=0;
+  for(Int_t j=0;j<5;j++)
+  for(Int_t k=0;k<18;k++) fHoles[j][k]=kFALSE;
+  fDebugStreamer = 0;
 
-}   
+} 
 
-//____________________________________________________________________
-AliTRDtracker::AliTRDtracker(const Text_t* name, const Text_t* title)
-                  :TNamed(name, title)
+//_____________________________________________________________________________
+AliTRDtracker::AliTRDtracker(const TFile *geomfile):AliTracker()
 {
-  fEvent     = 0;
-  fGeom      = NULL;
+  // 
+  //  Main constructor
+  //  
+   
+  fAddTRDseeds = kFALSE;
+  fGeom = NULL;
+  fNoTilt = kFALSE;
+  
+  TDirectory *savedir=gDirectory; 
+  TFile *in=(TFile*)geomfile;  
+  if (!in->IsOpen()) {
+    printf("AliTRDtracker::AliTRDtracker(): geometry file is not open!\n");
+    printf("    FULL TRD geometry and DEFAULT TRD parameter will be used\n");
+  }
+  else {
+    in->cd();  
+    fGeom = (AliTRDgeometry*) in->Get("TRDgeometry");
+  }
+
+  if(fGeom) {
+    //    printf("Found geometry version %d on file \n", fGeom->IsVersion());
+  }
+  else { 
+    printf("AliTRDtracker::AliTRDtracker(): can't find TRD geometry!\n");
+    fGeom = new AliTRDgeometry();
+  } 
+  fGeom->ReadGeoMatrices();
+
+  savedir->cd();  
 
   fNclusters = 0;
   fClusters  = new TObjArray(2000); 
   fNseeds    = 0;
-  fSeeds     = new TObjArray(20000);
+  fSeeds     = new TObjArray(2000);
   fNtracks   = 0;
-  fTracks    = new TObjArray(10000);
+  fTracks    = new TObjArray(1000);
+
+  for(Int_t geomS = 0; geomS < kTrackingSectors; geomS++) {
+    Int_t trS = CookSectorIndex(geomS);
+    fTrSec[trS] = new AliTRDtrackingSector(fGeom, geomS);
+    for (Int_t icham=0;icham<AliTRDgeometry::kNcham; icham++){
+      fHoles[icham][trS]=fGeom->IsHole(0,icham,geomS);
+    }
+  }
+  AliTRDpadPlane *padPlane = AliTRDCommonParam::Instance()->GetPadPlane(0,0);
+  Float_t tiltAngle = TMath::Abs(padPlane->GetTiltingAngle());
+  if(tiltAngle < 0.1) {
+    fNoTilt = kTRUE;
+  }
+
+  fTimeBinsPerPlane =  AliTRDcalibDB::Instance()->GetNumberOfTimeBins();
+
+  fDebugStreamer = new TTreeSRedirector("TRDdebug.root");
+
+  savedir->cd();
 
 }   
 
-//___________________________________________________________________
+//_____________________________________________________________________________
 AliTRDtracker::~AliTRDtracker()
 {
-  delete fClusters;
-  delete fTracks;
-  delete fSeeds;
-  delete fGeom;
-}   
+  //
+  // Destructor of AliTRDtracker 
+  //
 
-//___________________________________________________________________
-void AliTRDtracker::Clusters2Tracks()
-{
-  Int_t inner, outer;
-  Int_t fTotalNofTimeBins = fGeom->GetTimeMax() * AliTRDgeometry::Nplan();
-  Int_t nSteps = (Int_t) (fTotalNofTimeBins * fSeedDepth)/fSeedStep;
+  if (fClusters) {
+    fClusters->Delete();
+    delete fClusters;
+  }
+  if (fTracks) {
+    fTracks->Delete();
+    delete fTracks;
+  }
+  if (fSeeds) {
+    fSeeds->Delete();
+    delete fSeeds;
+  }
+  delete fGeom;  
 
-  for(Int_t i=0; i<nSteps; i++) {
-    printf("step %d out of %d \n", i+1, nSteps);
-    outer=fTotalNofTimeBins-1-i*fSeedStep; inner=outer-fSeedGap;
-    MakeSeeds(inner,outer);
-    FindTracks();
-  } 
-}          
+  for(Int_t geomS = 0; geomS < kTrackingSectors; geomS++) {
+    delete fTrSec[geomS];
+  }
+  if (fDebugStreamer) {    
+    //fDebugStreamer->Close();
+    delete fDebugStreamer;
+  }
+
+}   
 
-//_____________________________________________________________________
-Double_t AliTRDtracker::ExpectedSigmaY2(Double_t r, Double_t tgl, Double_t pt)
+//_____________________________________________________________________________
+Int_t  AliTRDtracker::LocalToGlobalID(Int_t lid)
 {
-  // Parametrised "expected" error of the cluster reconstruction in Y 
+  //
+  // Transform internal TRD ID to global detector ID
+  //
+
+  Int_t  isector = fGeom->GetSector(lid);
+  Int_t  ichamber= fGeom->GetChamber(lid);
+  Int_t  iplan   = fGeom->GetPlane(lid);
+  //
+  AliAlignObj::ELayerID iLayer = AliAlignObj::kTRD1;
+  switch (iplan) {
+  case 0:
+    iLayer = AliAlignObj::kTRD1;
+    break;
+  case 1:
+    iLayer = AliAlignObj::kTRD2;
+    break;
+  case 2:
+    iLayer = AliAlignObj::kTRD3;
+    break;
+  case 3:
+    iLayer = AliAlignObj::kTRD4;
+    break;
+  case 4:
+    iLayer = AliAlignObj::kTRD5;
+    break;
+  case 5:
+    iLayer = AliAlignObj::kTRD6;
+    break;
+  };
+  Int_t modId = isector*fGeom->Ncham()+ichamber;
+  UShort_t volid = AliAlignObj::LayerToVolUID(iLayer,modId);
+
+  return volid;
 
-  Double_t s = 0.2;    
-  return s;
 }
 
-//_____________________________________________________________________
-Double_t AliTRDtracker::ExpectedSigmaZ2(Double_t r, Double_t tgl)
+//_____________________________________________________________________________
+Int_t  AliTRDtracker::GlobalToLocalID(Int_t gid)
 {
-  // Parametrised "expected" error of the cluster reconstruction in Z 
-
-  Double_t s, pad = fGeom->GetRowPadSize();
-  s = pad * pad /12.;  
-  return s;
-}                  
+  //
+  // Transform global detector ID to local detector ID
+  // 
+
+  Int_t modId=0;
+  AliAlignObj::ELayerID  layerId  = AliAlignObj::VolUIDToLayer(gid, modId);
+  Int_t     isector  = modId/fGeom->Ncham();
+  Int_t     ichamber = modId%fGeom->Ncham();
+  Int_t     iLayer    = -1;
+  switch (layerId) {
+  case AliAlignObj::kTRD1:
+    iLayer = 0;
+    break;
+  case AliAlignObj::kTRD2:
+    iLayer = 1;
+    break;
+  case AliAlignObj::kTRD3:
+    iLayer = 2;
+    break;
+  case AliAlignObj::kTRD4:
+    iLayer = 3;
+    break;
+  case AliAlignObj::kTRD5:
+    iLayer = 4;
+    break;
+  case AliAlignObj::kTRD6:
+    iLayer = 5;
+    break;
+  default:
+    iLayer =-1;
+  }
+  if (iLayer<0) return -1;
+  Int_t lid = fGeom->GetDetector(iLayer,ichamber,isector);
 
-//_____________________________________________________________________
-inline Double_t f1trd(Double_t x1,Double_t y1,
-                      Double_t x2,Double_t y2,
-                      Double_t x3,Double_t y3)
-{
-  // Initial approximation of the track curvature
-  // Origin: Iouri Belikov, CERN, Jouri.Belikov@cern.ch
+  return lid;
 
-  Double_t d=(x2-x1)*(y3-y2)-(x3-x2)*(y2-y1);
-  Double_t a=0.5*((y3-y2)*(y2*y2-y1*y1+x2*x2-x1*x1)-
-                  (y2-y1)*(y3*y3-y2*y2+x3*x3-x2*x2));
-  Double_t b=0.5*((x2-x1)*(y3*y3-y2*y2+x3*x3-x2*x2)-
-                  (x3-x2)*(y2*y2-y1*y1+x2*x2-x1*x1));
+}
 
-  Double_t xr=TMath::Abs(d/(d*x1-a)), yr=d/(d*y1-b);
+//_____________________________________________________________________________
+Bool_t  AliTRDtracker::Transform(AliTRDcluster * cluster)
+{
+  //
+  // Transform something ... whatever ...
+  //
 
-  return -xr*yr/sqrt(xr*xr+yr*yr);
-}          
+  const Double_t kX0shift           = 2.52;    // magic constants for geo manager transformation
+  const Double_t kX0shift5          = 3.05;    // 
+  //
+  //
+  // apply alignment and calibration to transform cluster
+  //
+  //
+  Int_t detector = cluster->GetDetector();
+  Int_t plane   = fGeom->GetPlane(cluster->GetDetector());
+  Int_t chamber = fGeom->GetChamber(cluster->GetDetector());
+  Int_t sector  = fGeom->GetSector(cluster->GetDetector());
 
-//_____________________________________________________________________
-inline Double_t f2trd(Double_t x1,Double_t y1,
-                      Double_t x2,Double_t y2,
-                      Double_t x3,Double_t y3)
-{
-  // Initial approximation of the track curvature times center of curvature
-  // Origin: Iouri Belikov, CERN, Jouri.Belikov@cern.ch
+  Double_t dxAmp  = (Double_t) fGeom->CamHght();          // Amplification region
+  Double_t driftX = TMath::Max(cluster->GetX()-dxAmp*0.5,0.);  // drift distance
+  //
+  // ExB correction
+  //
+  Double_t vdrift = AliTRDcalibDB::Instance()->GetVdrift(cluster->GetDetector(),0,0);
+  Double_t exB =   AliTRDcalibDB::Instance()->GetOmegaTau(vdrift);
+  //
+  AliTRDCommonParam* commonParam = AliTRDCommonParam::Instance();  
+  AliTRDpadPlane * padPlane = commonParam->GetPadPlane(plane,chamber);
+  Double_t zshiftIdeal  = 0.5*(padPlane->GetRow0()+padPlane->GetRowEnd());
+  Double_t localPos[3], localPosTracker[3];
+  localPos[0] = -cluster->GetX();
+  localPos[1] =  cluster->GetY() - driftX*exB;
+  localPos[2] =  cluster->GetZ() -zshiftIdeal;
+  //
+  cluster->SetY(cluster->GetY() - driftX*exB);
+  Double_t xplane = (Double_t) AliTRDgeometry::GetTime0(plane); 
+  cluster->SetX(xplane- cluster->GetX());
+  //
+  TGeoHMatrix * matrix =  fGeom->GetCorrectionMatrix(cluster->GetDetector());
+  if (!matrix){
+    // no matrix found - if somebody used geometry with holes
+    AliError("Invalid Geometry - Default Geometry used\n");
+    return kTRUE;   
+  }
+  matrix->LocalToMaster(localPos, localPosTracker);  
+  //
+  //
+  //
+  if (AliTRDReconstructor::StreamLevel()>1){
+    (*fDebugStreamer)<<"Transform"<<
+      "Cl.="<<cluster<<
+      "matrix.="<<matrix<<
+      "Detector="<<detector<<
+      "Sector="<<sector<<
+      "Plane="<<plane<<
+      "Chamber="<<chamber<<
+      "lx0="<<localPosTracker[0]<<
+      "ly0="<<localPosTracker[1]<<
+      "lz0="<<localPosTracker[2]<<
+      "\n";
+  }
+  //
+  if (plane==5)
+     cluster->SetX(localPosTracker[0]+kX0shift5);
+  else
+    cluster->SetX(localPosTracker[0]+kX0shift);
+    
+  cluster->SetY(localPosTracker[1]);
+  cluster->SetZ(localPosTracker[2]);
 
-  Double_t d=(x2-x1)*(y3-y2)-(x3-x2)*(y2-y1);
-  Double_t a=0.5*((y3-y2)*(y2*y2-y1*y1+x2*x2-x1*x1)-
-                  (y2-y1)*(y3*y3-y2*y2+x3*x3-x2*x2));
-  Double_t b=0.5*((x2-x1)*(y3*y3-y2*y2+x3*x3-x2*x2)-
-                  (x3-x2)*(y2*y2-y1*y1+x2*x2-x1*x1));
+  return kTRUE;
 
-  Double_t xr=TMath::Abs(d/(d*x1-a)), yr=d/(d*y1-b);
+}
 
-  return -a/(d*y1-b)*xr/sqrt(xr*xr+yr*yr);
-}          
+//_____________________________________________________________________________
+// Bool_t  AliTRDtracker::Transform(AliTRDcluster * cluster)
+//{
+//   //
+//   //
+//   const Double_t kDriftCorrection  = 1.01;                 // drift coeficient correction
+//   const Double_t kTime0Cor         = 0.32;                 // time0 correction
+//   //
+//   const Double_t kX0shift           = 2.52; 
+//   const Double_t kX0shift5          = 3.05; 
+
+//   //
+//   // apply alignment and calibration to transform cluster
+//   //
+//   //
+//   Int_t detector = cluster->GetDetector();
+//   Int_t plane   = fGeom->GetPlane(cluster->GetDetector());
+//   Int_t chamber = fGeom->GetChamber(cluster->GetDetector());
+//   Int_t sector  = fGeom->GetSector(cluster->GetDetector());
+
+//   Double_t dxAmp  = (Double_t) fGeom->CamHght();          // Amplification region
+//   Double_t driftX = TMath::Max(cluster->GetX()-dxAmp*0.5,0.);  // drift distance
+//   //
+//   // ExB correction
+//   //
+//   Double_t vdrift = AliTRDcalibDB::Instance()->GetVdrift(cluster->GetDetector(),0,0);
+//   Double_t exB =   AliTRDcalibDB::Instance()->GetOmegaTau(vdrift);
+//   //
+
+//   AliTRDCommonParam* commonParam = AliTRDCommonParam::Instance();  
+//   AliTRDpadPlane * padPlane = commonParam->GetPadPlane(plane,chamber);
+//   Double_t zshiftIdeal  = 0.5*(padPlane->GetRow0()+padPlane->GetRowEnd());
+//   Double_t localPos[3], globalPos[3], localPosTracker[3], localPosTracker2[3];
+//   localPos[2] = -cluster->GetX();
+//   localPos[0] =  cluster->GetY() - driftX*exB;
+//   localPos[1] =  cluster->GetZ() -zshiftIdeal;
+//   TGeoHMatrix * matrix =  fGeom->GetGeoMatrix(cluster->GetDetector());
+//   matrix->LocalToMaster(localPos, globalPos);
+  
+//   Double_t sectorAngle = 20.*(sector%18)+10;
+//   TGeoHMatrix  rotSector;
+//   rotSector.RotateZ(sectorAngle);
+//   rotSector.LocalToMaster(globalPos, localPosTracker);
+//   //
+//   //
+//   TGeoHMatrix  matrix2(*matrix);
+//   matrix2.MultiplyLeft(&rotSector);
+//   matrix2.LocalToMaster(localPos,localPosTracker2);
+//   //
+//   //
+//   //
+//   cluster->SetY(cluster->GetY() - driftX*exB);
+//   Double_t xplane = (Double_t) AliTRDgeometry::GetTime0(plane); 
+//   cluster->SetX(xplane- kDriftCorrection*(cluster->GetX()-kTime0Cor));
+//   (*fDebugStreamer)<<"Transform"<<
+//     "Cl.="<<cluster<<
+//     "matrix.="<<matrix<<
+//     "matrix2.="<<&matrix2<<
+//     "Detector="<<detector<<
+//     "Sector="<<sector<<
+//     "Plane="<<plane<<
+//     "Chamber="<<chamber<<
+//     "lx0="<<localPosTracker[0]<<
+//     "ly0="<<localPosTracker[1]<<
+//     "lz0="<<localPosTracker[2]<<
+//     "lx2="<<localPosTracker2[0]<<
+//     "ly2="<<localPosTracker2[1]<<
+//     "lz2="<<localPosTracker2[2]<<
+//     "\n";
+//   //
+//   if (plane==5)
+//      cluster->SetX(localPosTracker[0]+kX0shift5);
+//   else
+//     cluster->SetX(localPosTracker[0]+kX0shift);
+    
+//   cluster->SetY(localPosTracker[1]);
+//   cluster->SetZ(localPosTracker[2]);
+//   return kTRUE;
+// }
 
-//_____________________________________________________________________
-inline Double_t f3trd(Double_t x1,Double_t y1,
-                      Double_t x2,Double_t y2,
-                      Double_t z1,Double_t z2)
+//_____________________________________________________________________________
+Bool_t AliTRDtracker::AdjustSector(AliTRDtrack *track) 
 {
-  // Initial approximation of the tangent of the track dip angle
-  // Origin: Iouri Belikov, CERN, Jouri.Belikov@cern.ch
-
-  return (z1 - z2)/sqrt((x1-x2)*(x1-x2)+(y1-y2)*(y1-y2));
-}            
+  //
+  // Rotates the track when necessary
+  //
 
+  Double_t alpha = AliTRDgeometry::GetAlpha(); 
+  Double_t y = track->GetY();
+  Double_t ymax = track->GetX()*TMath::Tan(0.5*alpha);
 
-//___________________________________________________________________
+  //Int_t ns = AliTRDgeometry::kNsect;
+  //Int_t s=Int_t(track->GetAlpha()/alpha)%ns; 
 
-Int_t AliTRDtracker::FindProlongation(AliTRDtrack& t, AliTRDtrackingSector *sec,
-                            Int_t s, Int_t rf)
-{
-  // Starting from current position on track=t this function tries 
-  // to extrapolate the track up to timeBin=rf and to confirm prolongation
-  // if a close cluster is found. *sec is a pointer to allocated
-  // array of sectors, in which the initial sector has index=s. 
+  if (y > ymax) {
+    //s = (s+1) % ns;
+    if (!track->Rotate(alpha)) return kFALSE;
+  } else if (y <-ymax) {
+    //s = (s-1+ns) % ns;                           
+    if (!track->Rotate(-alpha)) return kFALSE;   
+  } 
 
-  const Int_t TIME_BINS_TO_SKIP=Int_t(fSkipDepth*sec->GetNtimeBins());
-  Int_t try_again=TIME_BINS_TO_SKIP;
+  return kTRUE;
 
-  Double_t alpha=AliTRDgeometry::GetAlpha();
+}
 
-  Int_t ns=Int_t(2*TMath::Pi()/alpha+0.5);
+//_____________________________________________________________________________
+AliTRDcluster *AliTRDtracker::GetCluster(AliTRDtrack *track, Int_t plane
+                                       , Int_t timebin, UInt_t &index)
+{
+  //
+  // Try to find cluster in the backup list
+  //
 
-  for (Int_t nr=sec->GetTimeBinNumber(t.GetX())-1; nr>=rf; nr--) {
-    Double_t x=sec->GetX(nr), ymax=sec->GetMaxY(nr);
-    if (!t.PropagateTo(x)) {
-      cerr<<"Can't propagate to x = "<<x<<endl;
-      return 0;
+  AliTRDcluster * cl =0;
+  Int_t *indexes = track->GetBackupIndexes();
+  for (UInt_t i=0;i<kMaxTimeBinIndex;i++){
+    if (indexes[i]==0) break;  
+    AliTRDcluster * cli = (AliTRDcluster*)fClusters->UncheckedAt(indexes[i]);
+    if (!cli) break;
+    if (cli->GetLocalTimeBin()!=timebin) continue;
+    Int_t iplane = fGeom->GetPlane(cli->GetDetector());
+    if (iplane==plane) {
+      cl = cli;
+      index = indexes[i];
+      break;
     }
+  }
 
-    AliTRDcluster *cl=0;
-    UInt_t index=0;
+  return cl;
 
-    Double_t max_chi2=fMaxChi2;
+}
 
-    AliTRDtimeBin& time_bin=sec[s][nr];
-    Double_t sy2=ExpectedSigmaY2(t.GetX(),t.GetTgl(),t.GetPt());
-    Double_t sz2=ExpectedSigmaZ2(t.GetX(),t.GetTgl());
-    Double_t road=5.*sqrt(t.GetSigmaY2() + sy2), y=t.GetY(), z=t.GetZ();
+//_____________________________________________________________________________
+Int_t  AliTRDtracker::GetLastPlane(AliTRDtrack * track)
+{
+  //
+  // Return last updated plane
+  //
 
-    if (road>fWideRoad) {
-      if (t.GetNclusters() > 4) {
-       cerr<<t.GetNclusters()<<" FindProlongation: Road is too wide !\n";
-      }
-      return 0;
-    }       
+  Int_t lastplane=0;
+  Int_t *indexes = track->GetBackupIndexes();
+  for (UInt_t i=0;i<kMaxTimeBinIndex;i++){
+    AliTRDcluster * cli = (AliTRDcluster*)fClusters->UncheckedAt(indexes[i]);
+    if (!cli) break;
+    Int_t iplane = fGeom->GetPlane(cli->GetDetector());
+    if (iplane>lastplane) {
+      lastplane = iplane;
+    }
+  }
 
-    if (time_bin) {
-      for (Int_t i=time_bin.Find(y-road); i<time_bin; i++) {
-        AliTRDcluster* c=(AliTRDcluster*)(time_bin[i]);
-        if (c->GetY() > y+road) break;
-        if (c->IsUsed() > 0) continue;
+  return lastplane;
 
-       if((c->GetZ()-z)*(c->GetZ()-z) > 25. + sz2) continue;
+}
 
-        Double_t chi2=t.GetPredictedChi2(c);
+//_____________________________________________________________________________
+Int_t AliTRDtracker::Clusters2Tracks(AliESD* event)
+{
+  //
+  // Finds tracks within the TRD. The ESD event is expected to contain seeds 
+  // at the outer part of the TRD. The seeds
+  // are found within the TRD if fAddTRDseeds is TRUE. 
+  // The tracks are propagated to the innermost time bin 
+  // of the TRD and the ESD event is updated
+  //
 
-        if (chi2 > max_chi2) continue;
-        max_chi2=chi2;
-        cl=c;
-        index=time_bin.GetIndex(i);
-      }   
+  Int_t timeBins = fTrSec[0]->GetNumberOfTimeBins();
+  Float_t foundMin = fgkMinClustersInTrack * timeBins; 
+  Int_t nseed = 0;
+  Int_t found = 0;
+  //  Int_t innerTB = fTrSec[0]->GetInnerTimeBin();
+
+  Int_t n = event->GetNumberOfTracks();
+  for (Int_t i=0; i<n; i++) {
+    AliESDtrack* seed=event->GetTrack(i);
+    ULong_t status=seed->GetStatus();
+    if ( (status & AliESDtrack::kTRDout ) == 0 ) continue;
+    if ( (status & AliESDtrack::kTRDin) != 0 ) continue;
+    nseed++;
+    
+    AliTRDtrack* seed2 = new AliTRDtrack(*seed);
+    //seed2->ResetCovariance(); 
+    AliTRDtrack *pt = new AliTRDtrack(*seed2,seed2->GetAlpha());
+    AliTRDtrack &t=*pt; 
+    FollowProlongation(t); 
+    if (t.GetNumberOfClusters() >= foundMin) {
+      UseClusters(&t);
+      CookLabel(pt, 1-fgkLabelFraction);
+      //      t.CookdEdx();
     }
-    if (cl) {
+    found++;
+//    cout<<found<<'\r';     
+
+    Double_t xTPC = 250;
+    if (PropagateToX(t,xTPC,fgkMaxStep)) {
+      seed->UpdateTrackParams(pt, AliESDtrack::kTRDin);
+    }  
+    delete seed2;
+    delete pt;
+  }     
+
+  cout<<"Number of loaded seeds: "<<nseed<<endl;  
+  cout<<"Number of found tracks from loaded seeds: "<<found<<endl;
+
+  // after tracks from loaded seeds are found and the corresponding 
+  // clusters are used, look for additional seeds from TRD
+  
+  
+  cout<<"Total number of found tracks: "<<found<<endl;
+    
+  return 0;    
 
-      //      Float_t l=sec->GetPitch();
-      //      t.SetSampledEdx(cl->fQ/l,Int_t(t));  
+}     
      
-      t.Update(cl,max_chi2,index);
+//_____________________________________________________________________________
+Int_t AliTRDtracker::PropagateBack(AliESD* event) 
+{
+  //
+  // Gets seeds from ESD event. The seeds are AliTPCtrack's found and
+  // backpropagated by the TPC tracker. Each seed is first propagated 
+  // to the TRD, and then its prolongation is searched in the TRD.
+  // If sufficiently long continuation of the track is found in the TRD
+  // the track is updated, otherwise it's stored as originaly defined 
+  // by the TPC tracker.   
+  //  
+
+  Int_t found=0;  
+  Float_t foundMin = 20;
+  Int_t n = event->GetNumberOfTracks();
+  //
+  //Sort tracks
+  Float_t *quality =new Float_t[n];
+  Int_t *index   =new Int_t[n];
+  for (Int_t i=0; i<n; i++) {
+    AliESDtrack* seed=event->GetTrack(i);
+    Double_t covariance[15];
+    seed->GetExternalCovariance(covariance);
+    quality[i] = covariance[0]+covariance[2];      
+  }
+  TMath::Sort(n,quality,index,kFALSE);
+  //
+  for (Int_t i=0; i<n; i++) {
+    //    AliESDtrack* seed=event->GetTrack(i);
+    AliESDtrack* seed=event->GetTrack(index[i]);
+
+    ULong_t status=seed->GetStatus();
+    if ( (status & AliESDtrack::kTPCout ) == 0 ) continue;
+    if ( (status & AliESDtrack::kTRDout) != 0 ) continue;
+
+    Int_t lbl = seed->GetLabel();
+    AliTRDtrack *track = new AliTRDtrack(*seed);
+    track->SetSeedLabel(lbl);
+    seed->UpdateTrackParams(track, AliESDtrack::kTRDbackup); //make backup
+    fNseeds++;
+    Float_t p4     = track->GetC();
+    //
+    Int_t expectedClr = FollowBackProlongation(*track);
+    if (TMath::Abs(track->GetC()-p4)/TMath::Abs(p4)<0.2 || TMath::Abs(track->GetPt())>0.8 ) {
+      // 
+      //make backup for back propagation 
+      //
+      Int_t foundClr = track->GetNumberOfClusters();
+      if (foundClr >= foundMin) {
+       track->CookdEdx(); 
+       CookdEdxTimBin(*track);
+       CookLabel(track, 1-fgkLabelFraction);
+       if (track->GetBackupTrack()) UseClusters(track->GetBackupTrack());
+       if(track->GetChi2()/track->GetNumberOfClusters()<4) {   // sign only gold tracks
+         if (seed->GetKinkIndex(0)==0&&TMath::Abs(track->GetPt())<1.5 ) UseClusters(track);
+       }
+       Bool_t isGold = kFALSE;
+       
+       if (track->GetChi2()/track->GetNumberOfClusters()<5) {  //full gold track
+         // seed->UpdateTrackParams(track, AliESDtrack::kTRDbackup);
+          if (track->GetBackupTrack()) seed->UpdateTrackParams(track->GetBackupTrack(), AliESDtrack::kTRDbackup);
+         isGold = kTRUE;
+       }
+       if (!isGold && track->GetNCross()==0&&track->GetChi2()/track->GetNumberOfClusters()<7){ //almost gold track
+         //      seed->UpdateTrackParams(track, AliESDtrack::kTRDbackup);
+         if (track->GetBackupTrack()) seed->UpdateTrackParams(track->GetBackupTrack(), AliESDtrack::kTRDbackup);
+         isGold = kTRUE;
+       }
+       if (!isGold && track->GetBackupTrack()){
+         if (track->GetBackupTrack()->GetNumberOfClusters()>foundMin&&
+             (track->GetBackupTrack()->GetChi2()/(track->GetBackupTrack()->GetNumberOfClusters()+1))<7){         
+           seed->UpdateTrackParams(track->GetBackupTrack(), AliESDtrack::kTRDbackup);
+           isGold = kTRUE;
+         }
+       }
+       if (track->StatusForTOF()>0 &&track->fNCross==0 && Float_t(track->fN)/Float_t(track->fNExpected)>0.4){
+         //seed->UpdateTrackParams(track->GetBackupTrack(), AliESDtrack::kTRDbackup);
+       }
+      }
+    }
+    // Debug part of tracking
+    TTreeSRedirector& cstream = *fDebugStreamer;
+    Int_t eventNr = event->GetEventNumber();
+    if (AliTRDReconstructor::StreamLevel()>0){
+      if (track->GetBackupTrack()){
+       cstream<<"Tracks"<<
+         "EventNr="<<eventNr<<
+         "ESD.="<<seed<<
+         "trd.="<<track<<
+         "trdback.="<<track->GetBackupTrack()<<        
+         "\n";
+      }else{
+       cstream<<"Tracks"<<
+         "EventNr="<<eventNr<<
+         "ESD.="<<seed<<
+         "trd.="<<track<<
+         "trdback.="<<track<<
+         "\n";
+      }
+    }
+    //
+    //Propagation to the TOF (I.Belikov)    
+    if (track->GetStop()==kFALSE){
+      
+      Double_t xtof=371.;
+      Double_t c2=track->GetC()*xtof - track->GetEta();
+      if (TMath::Abs(c2)>=0.99) {
+       delete track;
+       continue;
+      }
+      Double_t xTOF0 = 370. ;          
+      PropagateToX(*track,xTOF0,fgkMaxStep);
+      //
+      //energy losses taken to the account - check one more time
+      c2=track->GetC()*xtof - track->GetEta();
+      if (TMath::Abs(c2)>=0.99) {
+       delete track;
+       continue;
+      }
 
-      try_again=TIME_BINS_TO_SKIP;
-    } else {
-      if (try_again==0) break;
+      //      
+      Double_t ymax=xtof*TMath::Tan(0.5*AliTRDgeometry::GetAlpha());
+      Double_t y=track->GetYat(xtof);
       if (y > ymax) {
-       cerr<<"y > ymax: "<<y<<" > "<<ymax<<endl;
-         s = (s+1) % ns;
-         if (!t.Rotate(alpha)) {
-          cerr<<"Failed to rotate, alpha = "<<alpha<<endl;
-          return 0;
-        }
+       if (!track->Rotate(AliTRDgeometry::GetAlpha())) {
+         delete track;
+         continue;
+       }
       } else if (y <-ymax) {
-       cerr<<"y < -ymax: "<<y<<" < "<<-ymax<<endl;
-         s = (s-1+ns) % ns;
-         if (!t.Rotate(-alpha)) {
-          cerr<<"Failed to rotate, alpha = "<<alpha<<endl;
-          return 0;
-        }
+       if (!track->Rotate(-AliTRDgeometry::GetAlpha())) {
+         delete track;
+         continue;
+       }
+      }
+      
+      if (track->PropagateTo(xtof)) {
+       seed->UpdateTrackParams(track, AliESDtrack::kTRDout);
+        for (Int_t i=0;i<AliESDtrack::kNPlane;i++) {
+          for (Int_t j=0;j<AliESDtrack::kNSlice;j++) {
+            seed->SetTRDsignals(track->GetPIDsignals(i,j),i,j);
+         }
+          seed->SetTRDTimBin(track->GetPIDTimBin(i),i);
+        }
+       //      seed->SetTRDtrack(new AliTRDtrack(*track));
+       if (track->GetNumberOfClusters()>foundMin) found++;
+      }
+    }else{
+      if (track->GetNumberOfClusters()>15&&track->GetNumberOfClusters()>0.5*expectedClr){
+       seed->UpdateTrackParams(track, AliESDtrack::kTRDout);
+       //seed->SetStatus(AliESDtrack::kTRDStop);    
+        for (Int_t i=0;i<AliESDtrack::kNPlane;i++) {
+          for (Int_t j=0;j<AliESDtrack::kNSlice;j++) {
+            seed->SetTRDsignals(track->GetPIDsignals(i,j),i,j);
+         }
+          seed->SetTRDTimBin(track->GetPIDTimBin(i),i);
+        }
+       //seed->SetTRDtrack(new AliTRDtrack(*track));
+       found++;
       }
-      try_again--;
     }
-  }
+    seed->SetTRDQuality(track->StatusForTOF());    
+    seed->SetTRDBudget(track->fBudget[0]);    
+  
+    delete track;
+    //
+    //End of propagation to the TOF
+    //if (foundClr>foundMin)
+    //  seed->UpdateTrackParams(track, AliESDtrack::kTRDout);
+    
 
-  return 1;
-}          
+  }
+  
+  cerr<<"Number of seeds: "<<fNseeds<<endl;  
+  cerr<<"Number of back propagated TRD tracks: "<<found<<endl;
+  
+  if (AliTRDReconstructor::SeedingOn()) MakeSeedsMI(3,5,event); //new seeding
 
+  fSeeds->Clear(); fNseeds=0;
+  delete [] index;
+  delete [] quality;
+  
+  return 0;
 
+}
 
 //_____________________________________________________________________________
-void AliTRDtracker::GetEvent(const Char_t *hitfile, const Char_t *clusterfile)
+Int_t AliTRDtracker::RefitInward(AliESD* event)
 {
-  // Opens a ROOT-file with TRD-clusters and reads in the cluster-tree
+  //
+  // Refits tracks within the TRD. The ESD event is expected to contain seeds 
+  // at the outer part of the TRD. 
+  // The tracks are propagated to the innermost time bin 
+  // of the TRD and the ESD event is updated
+  // Origin: Thomas KUHR (Thomas.Kuhr@cern.ch)
+  //
+
+  Int_t timeBins = fTrSec[0]->GetNumberOfTimeBins();
+  Float_t foundMin = fgkMinClustersInTrack * timeBins; 
+  Int_t nseed = 0;
+  Int_t found = 0;
+  //  Int_t innerTB = fTrSec[0]->GetInnerTimeBin();
+  AliTRDtrack seed2;
+
+  Int_t n = event->GetNumberOfTracks();
+  for (Int_t i=0; i<n; i++) {
+    AliESDtrack* seed=event->GetTrack(i);
+    new(&seed2) AliTRDtrack(*seed);
+    if (seed2.GetX()<270){
+      seed->UpdateTrackParams(&seed2, AliESDtrack::kTRDbackup); // backup TPC track - only update
+      continue;
+    }
 
-  ReadClusters(fClusters, clusterfile);
+    ULong_t status=seed->GetStatus();
+    if ( (status & AliESDtrack::kTRDout ) == 0 ) {
+      continue;
+    }
+    if ( (status & AliESDtrack::kTRDin) != 0 ) {
+      continue;
+    }
+    nseed++;    
+//     if (1/seed2.Get1Pt()>1.5&& seed2.GetX()>260.) {
+//       Double_t oldx = seed2.GetX();
+//       seed2.PropagateTo(500.);
+//       seed2.ResetCovariance(1.);
+//       seed2.PropagateTo(oldx);
+//     }
+//     else{
+//       seed2.ResetCovariance(5.); 
+//     }
+
+    AliTRDtrack *pt = new AliTRDtrack(seed2,seed2.GetAlpha());
+    Int_t * indexes2 = seed2.GetIndexes();
+    for (Int_t i=0;i<AliESDtrack::kNPlane;i++) {
+      for (Int_t j=0;j<AliESDtrack::kNSlice;j++) {
+        pt->SetPIDsignals(seed2.GetPIDsignals(i,j),i,j);
+      }
+      pt->SetPIDTimBin(seed2.GetPIDTimBin(i),i);
+    }
 
-  // get geometry from the file with hits
+    Int_t * indexes3 = pt->GetBackupIndexes();
+    for (Int_t i=0;i<200;i++) {
+      if (indexes2[i]==0) break;
+      indexes3[i] = indexes2[i];
+    }          
+    //AliTRDtrack *pt = seed2;
+    AliTRDtrack &t=*pt; 
+    FollowProlongation(t); 
+    if (t.GetNumberOfClusters() >= foundMin) {
+      //      UseClusters(&t);
+      //CookLabel(pt, 1-fgkLabelFraction);
+      t.CookdEdx();
+      CookdEdxTimBin(t);
+    }
+    found++;
+//    cout<<found<<'\r';     
+    Double_t xTPC = 250;
+    if(PropagateToX(t,xTPC,fgkMaxStep)) {
+      seed->UpdateTrackParams(pt, AliESDtrack::kTRDrefit);
+      for (Int_t i=0;i<AliESDtrack::kNPlane;i++) {
+        for (Int_t j=0;j<AliESDtrack::kNSlice;j++) {
+          seed->SetTRDsignals(pt->GetPIDsignals(i,j),i,j);
+       }
+        seed->SetTRDTimBin(pt->GetPIDTimBin(i),i);
+      }
+    }else{
+      //if not prolongation to TPC - propagate without update
+      AliTRDtrack* seed2 = new AliTRDtrack(*seed);
+      seed2->ResetCovariance(5.); 
+      AliTRDtrack *pt2 = new AliTRDtrack(*seed2,seed2->GetAlpha());
+      delete seed2;
+      if (PropagateToX(*pt2,xTPC,fgkMaxStep)) { 
+        //pt2->CookdEdx(0.,1.);
+        pt2->CookdEdx( ); // Modification by PS
+        CookdEdxTimBin(*pt2);
+       seed->UpdateTrackParams(pt2, AliESDtrack::kTRDrefit);
+        for (Int_t i=0;i<AliESDtrack::kNPlane;i++) {
+          for (Int_t j=0;j<AliESDtrack::kNSlice;j++) {
+            seed->SetTRDsignals(pt2->GetPIDsignals(i,j),i,j);
+         }
+          seed->SetTRDTimBin(pt2->GetPIDTimBin(i),i);
+        }
+      }
+      delete pt2;
+    }  
+    delete pt;
+  }   
 
-  TFile *fInputFile = (TFile*) gROOT->GetListOfFiles()->FindObject(hitfile);
-  if (!fInputFile) {
-    printf("AliTRDtracker::Open -- ");
-    printf("Open the ALIROOT-file %s.\n",hitfile);
-    fInputFile = new TFile(hitfile);
-  }
-  else {
-    printf("AliTRDtracker::Open -- ");
-    printf("%s is already open.\n",hitfile);
-  }
+  cout<<"Number of loaded seeds: "<<nseed<<endl;  
+  cout<<"Number of found tracks from loaded seeds: "<<found<<endl;
 
-  // Get AliRun object from file or create it if not on file
+  return 0;
 
-  gAlice = (AliRun*) fInputFile->Get("gAlice");
-  if (gAlice) {
-    printf("AliTRDtracker::GetEvent -- ");
-    printf("AliRun object found on file.\n");
-  }
-  else {
-    printf("AliTRDtracker::GetEvent -- ");
-    printf("Could not find AliRun object.\n");
-  }
+}
 
-  // Import the Trees for the event nEvent in the file
-  Int_t nparticles = gAlice->GetEvent(fEvent);
-  cerr<<"nparticles = "<<nparticles<<endl;
+//_____________________________________________________________________________
+Int_t AliTRDtracker::FollowProlongation(AliTRDtrack& t)
+{
+  //
+  // Starting from current position on track=t this function tries
+  // to extrapolate the track up to timeBin=0 and to confirm prolongation
+  // if a close cluster is found. Returns the number of clusters
+  // expected to be found in sensitive layers
+  // GeoManager used to estimate mean density
+  //
 
-  if (nparticles <= 0) {
-    printf("AliTRDtracker::GetEvent -- ");
-    printf("No entries in the trees for event %d.\n",fEvent);
+  Int_t sector;
+  Int_t lastplane = GetLastPlane(&t);
+  Double_t radLength = 0.0;
+  Double_t rho = 0.0;
+  Int_t expectedNumberOfClusters = 0;
+  //
+  //
+  //
+  for (Int_t iplane = lastplane; iplane>=0; iplane--){
+    //
+    Int_t    row0 = GetGlobalTimeBin(0, iplane,GetTimeBinsPerPlane()-1);
+    Int_t    rowlast = GetGlobalTimeBin(0, iplane,0);
+    //
+    // propagate track close to the plane if neccessary
+    //
+    Double_t currentx  = fTrSec[0]->GetLayer(rowlast)->GetX();
+    if (currentx < -fgkMaxStep +t.GetX()){
+      //propagate closer to chamber - safety space fgkMaxStep      
+      if (!PropagateToX(t, currentx+fgkMaxStep, fgkMaxStep)) break;
+    }
+    if (!AdjustSector(&t)) break;
+    //
+    // get material budget
+    //
+    Double_t xyz0[3],xyz1[3],param[7],x,y,z;
+    t.GetGlobalXYZ(xyz0[0],xyz0[1],xyz0[2]);   //starting global position
+    // end global position
+    x = fTrSec[0]->GetLayer(row0)->GetX();
+    if (!t.GetProlongation(x,y,z)) break;
+    xyz1[0] = x*TMath::Cos(t.GetAlpha())-y*TMath::Sin(t.GetAlpha()); 
+    xyz1[1] = +x*TMath::Sin(t.GetAlpha())+y*TMath::Cos(t.GetAlpha());
+    xyz1[2] = z;
+    AliKalmanTrack::MeanMaterialBudget(xyz0,xyz1,param);       
+    rho = param[0];
+    radLength = param[1];   // get mean propagation parameters
+    //
+    // propagate nad update
+    //
+    sector = t.GetSector();
+    //    for (Int_t itime=GetTimeBinsPerPlane()-1;itime>=0;itime--) {
+    for (Int_t itime=0 ;itime<GetTimeBinsPerPlane();itime++) {
+      Int_t    ilayer = GetGlobalTimeBin(0, iplane,itime);
+      expectedNumberOfClusters++;       
+      t.fNExpected++;
+      if (t.fX>345) t.fNExpectedLast++;
+      AliTRDpropagationLayer& timeBin=*(fTrSec[sector]->GetLayer(ilayer));
+      AliTRDcluster *cl=0;
+      UInt_t index=0;
+      Double_t maxChi2=fgkMaxChi2;
+      x = timeBin.GetX();
+      if (timeBin) {
+       AliTRDcluster * cl0 = timeBin[0];
+       if (!cl0) continue;         // no clusters in given time bin
+       Int_t plane = fGeom->GetPlane(cl0->GetDetector());
+       if (plane>lastplane) continue;
+       Int_t timebin = cl0->GetLocalTimeBin();
+       AliTRDcluster * cl2= GetCluster(&t,plane, timebin,index);
+       //
+       if (cl2) {
+         cl =cl2;      
+         Double_t h01 = GetTiltFactor(cl);
+         maxChi2=t.GetPredictedChi2(cl,h01);
+       }       
+        if (cl) {
+         //      if (cl->GetNPads()<5) 
+         Double_t dxsample = timeBin.GetdX();
+         t.SetSampledEdx(TMath::Abs(cl->GetQ()/dxsample)); 
+          Double_t h01 = GetTiltFactor(cl);
+         Int_t det = cl->GetDetector();    
+         Int_t plane = fGeom->GetPlane(det);
+         if (t.fX>345){
+           t.fNLast++;
+           t.fChi2Last+=maxChi2;
+         }
+         Double_t xcluster = cl->GetX();
+         t.PropagateTo(xcluster,radLength,rho);
+         if(!t.UpdateMI(cl,maxChi2,index,h01,plane)) {
+         }
+       }                       
+      }
+    } 
   }
 
-  AliTRD *TRD = (AliTRD*) gAlice->GetDetector("TRD");
-  fGeom = TRD->GetGeometry();
-
-}     
+  return expectedNumberOfClusters;  
 
+}                
 
 //_____________________________________________________________________________
-void AliTRDtracker::SetUpSectors(AliTRDtrackingSector *sec)
+Int_t AliTRDtracker::FollowBackProlongation(AliTRDtrack& t)
 {
-  // Fills clusters into TRD tracking_sectors 
-  // Note that the numbering scheme for the TRD tracking_sectors 
-  // differs from that of TRD sectors
-
-  for (Int_t i=0; i<AliTRDgeometry::Nsect(); i++) sec[i].SetUp();
-
-  //  Sort clusters into AliTRDtimeBin's within AliTRDtrackSector's 
-
-  cerr<<"MakeSeeds: sorting clusters"<<endl;
-              
-  Int_t ncl=fClusters->GetEntriesFast();
-  UInt_t index;
-  while (ncl--) {
-    printf("\r %d left",ncl); 
-    AliTRDcluster *c=(AliTRDcluster*)fClusters->UncheckedAt(ncl);
-    Int_t detector=c->GetDetector(), local_time_bin=c->GetLocalTimeBin();
-    Int_t sector=fGeom->GetSector(detector);
+  //  
+  // Starting from current radial position of track <t> this function
+  // extrapolates the track up to outer timebin and in the sensitive
+  // layers confirms prolongation if a close cluster is found. 
+  // Returns the number of clusters expected to be found in sensitive layers
+  // Use GEO manager for material Description
+  //
 
-    Int_t tracking_sector=sector;
-    if(sector > 0) tracking_sector = AliTRDgeometry::kNsect - sector;
+  Int_t sector;
+  Int_t clusters[1000];
+  for (Int_t i=0;i<1000;i++) clusters[i]=-1;
+  Double_t radLength = 0.0;
+  Double_t rho = 0.0;
+  Int_t expectedNumberOfClusters = 0;
+  Float_t ratio0=0;
+  AliTRDtracklet tracklet;
+  //
+  //
+  for (Int_t iplane = 0; iplane<AliESDtrack::kNPlane; iplane++){
+    Int_t    row0    = GetGlobalTimeBin(0, iplane,GetTimeBinsPerPlane()-1);
+    Int_t    rowlast = GetGlobalTimeBin(0, iplane,0);
+    //
+    Double_t currentx  = fTrSec[0]->GetLayer(row0)->GetX();
+    if (currentx<t.GetX()) continue;
+    //
+    //       propagate closer to chamber if neccessary 
+    //
+    if (currentx > fgkMaxStep +t.GetX()){
+      if (!PropagateToX(t, currentx-fgkMaxStep, fgkMaxStep)) break;
+    }
+    if (!AdjustSector(&t)) break;
+    if (TMath::Abs(t.GetSnp())>fgkMaxSnp) break;
+    //
+    // get material budget inside of chamber
+    //
+    Double_t xyz0[3],xyz1[3],param[7],x,y,z;
+    t.GetGlobalXYZ(xyz0[0],xyz0[1],xyz0[2]);   //starting global position
+    // end global position
+    x = fTrSec[0]->GetLayer(rowlast)->GetX();
+    if (!t.GetProlongation(x,y,z)) break;
+    xyz1[0] = x*TMath::Cos(t.GetAlpha())-y*TMath::Sin(t.GetAlpha()); 
+    xyz1[1] = +x*TMath::Sin(t.GetAlpha())+y*TMath::Cos(t.GetAlpha());
+    xyz1[2] = z;
+    AliKalmanTrack::MeanMaterialBudget(xyz0,xyz1,param);       
+    rho = param[0];
+    radLength = param[1];   // get mean propagation parameters
+    //
+    // Find clusters
+    //
+    sector = t.GetSector();
+    Float_t  ncl   = FindClusters(sector,row0,rowlast,&t,clusters,tracklet);
+    if (tracklet.GetN()<GetTimeBinsPerPlane()/3) continue;
+    //
+    // Propagate and update track
+    //
+    for (Int_t itime= GetTimeBinsPerPlane()-1;itime>=0;itime--) {
+      Int_t    ilayer = GetGlobalTimeBin(0, iplane,itime);
+      expectedNumberOfClusters++;       
+      t.fNExpected++;
+      if (t.fX>345) t.fNExpectedLast++;
+      AliTRDpropagationLayer& timeBin=*(fTrSec[sector]->GetLayer(ilayer));
+      AliTRDcluster *cl=0;
+      UInt_t index=0;
+      Double_t maxChi2=fgkMaxChi2;
+      x = timeBin.GetX();
+      //
+      if (timeBin) {   
+       if (clusters[ilayer]>0) {
+         index = clusters[ilayer];
+         cl    = (AliTRDcluster*)GetCluster(index);
+         Double_t h01 = GetTiltFactor(cl);
+          maxChi2=t.GetPredictedChi2(cl,h01);          
+       }
+       
+        if (cl) {
+         //      if (cl->GetNPads()<5) 
+         Double_t dxsample = timeBin.GetdX();
+         t.SetSampledEdx(TMath::Abs(cl->GetQ()/dxsample)); 
+          Double_t h01 = GetTiltFactor(cl);
+         Int_t det = cl->GetDetector();    
+         Int_t plane = fGeom->GetPlane(det);
+         if (t.fX>345){
+           t.fNLast++;
+           t.fChi2Last+=maxChi2;
+         }
+         Double_t xcluster = cl->GetX();
+         t.PropagateTo(xcluster,radLength,rho);
+         if(!t.UpdateMI(cl,maxChi2,index,h01,plane)) {
+           if(!t.Update(cl,maxChi2,index,h01)) {
+           }
+          }  
+         //      
+         // reset material budget if 2 consecutive gold
+         if (plane>0) 
+           if (t.fTracklets[plane].GetN()+t.fTracklets[plane-1].GetN()>20){
+             t.fBudget[2] = 0;
+           }     
+       }                       
+      }
+    }
+    ratio0 = ncl/Float_t(fTimeBinsPerPlane);
+    Float_t  ratio1 = Float_t(t.fN+1)/Float_t(t.fNExpected+1.);        
+    if (tracklet.GetChi2()<18.&&ratio0>0.8 && ratio1>0.6 && ratio0+ratio1>1.5 && t.GetNCross()==0 && TMath::Abs(t.GetSnp())<0.85&&t.fN>20){
+      t.MakeBackupTrack();                            // make backup of the track until is gold
+    }
+    
+  }
 
-    Int_t tb=sec[sector].GetTimeBin(detector,local_time_bin); 
-    index=ncl;
-    sec[tracking_sector][tb].InsertCluster(c,index);
-  }    
-  printf("\r\n");
-}
+  return expectedNumberOfClusters;  
 
+}         
 
 //_____________________________________________________________________________
-void AliTRDtracker::MakeSeeds(Int_t inner, Int_t outer)
+Int_t  AliTRDtracker::PropagateToX(AliTRDtrack& t, Double_t xToGo, Double_t maxStep)
 {
-  // Creates track seeds using clusters in timeBins=i1,i2
+  //
+  // Starting from current radial position of track <t> this function
+  // extrapolates the track up to radial position <xToGo>. 
+  // Returns 1 if track reaches the plane, and 0 otherwise 
+  //
 
-  Int_t i2 = inner, i1 = outer; 
+  const Double_t kEpsilon = 0.00001;
+  //  Double_t tanmax = TMath::Tan(0.5*AliTRDgeometry::GetAlpha()); 
+  Double_t xpos     = t.GetX();
+  Double_t dir      = (xpos<xToGo) ? 1.:-1.;
+  //
+  while ( (xToGo-xpos)*dir > kEpsilon){
+    Double_t step = dir*TMath::Min(TMath::Abs(xToGo-xpos), maxStep);
+    //
+    Double_t xyz0[3],xyz1[3],param[7],x,y,z;
+    t.GetGlobalXYZ(xyz0[0],xyz0[1],xyz0[2]);   //starting global position
+    x    = xpos+step;
+    //
+    if (!t.GetProlongation(x,y,z)) return 0;   // no prolongation
+    //
+    xyz1[0] = x*TMath::Cos(t.GetAlpha())-y*TMath::Sin(t.GetAlpha()); 
+    xyz1[1] = +x*TMath::Sin(t.GetAlpha())+y*TMath::Cos(t.GetAlpha());
+    xyz1[2] = z;
+    //
+    AliKalmanTrack::MeanMaterialBudget(xyz0,xyz1,param);       
+    if (!t.PropagateTo(x,param[1],param[0])) return 0;
+    AdjustSector(&t);
+    xpos = t.GetX();
+  }
 
-  if (!fClusters) return; 
+  return 1;
 
-  AliTRDtrackingSector fTrSec[AliTRDgeometry::kNsect];
-  SetUpSectors(fTrSec);
+}
 
-  // find seeds
+//_____________________________________________________________________________
+Int_t AliTRDtracker::LoadClusters(TTree *cTree)
+{
+  //
+  // Fills clusters into TRD tracking_sectors 
+  // Note that the numbering scheme for the TRD tracking_sectors 
+  // differs from that of TRD sectors
+  //
 
-  Double_t x[5], c[15];
-  Int_t max_sec=AliTRDgeometry::kNsect;
+  cout<<"\n Read Sectors  clusters"<<endl;
+  if (ReadClusters(fClusters,cTree)) {
+     Error("LoadClusters","Problem with reading the clusters !");
+     return 1;
+  }
+  Int_t ncl=fClusters->GetEntriesFast();
+  fNclusters=ncl;
+  cout<<"\n LoadSectors: sorting "<<ncl<<" clusters"<<endl;
+              
+  UInt_t index;
+  for (Int_t ichamber=0;ichamber<5;ichamber++)
+    for (Int_t isector=0;isector<18;isector++){
+      fHoles[ichamber][isector]=kTRUE;
+    }
 
-  Double_t alpha=AliTRDgeometry::GetAlpha();
-  Double_t shift=AliTRDgeometry::GetAlpha()/2.;
-  Double_t cs=cos(alpha), sn=sin(alpha);  
 
-  Double_t x1 =fTrSec[0].GetX(i1);
-  Double_t xx2=fTrSec[0].GetX(i2);  
+  while (ncl--) {
+//    printf("\r %d left  ",ncl); 
+    AliTRDcluster *c=(AliTRDcluster*)fClusters->UncheckedAt(ncl);
+    Int_t detector=c->GetDetector();
+    Int_t localTimeBin=c->GetLocalTimeBin();
+    Int_t sector=fGeom->GetSector(detector);
+    Int_t plane=fGeom->GetPlane(detector);
+      
+    Int_t trackingSector = CookSectorIndex(sector);
+    if (c->GetLabel(0)>0){
+      Int_t chamber = fGeom->GetChamber(detector);
+      fHoles[chamber][trackingSector]=kFALSE;
+    }
 
-  for (Int_t ns=0; ns<max_sec; ns++) {
+    Int_t gtb = fTrSec[trackingSector]->CookTimeBinIndex(plane,localTimeBin);
+    if(gtb < 0) continue; 
+    Int_t layer = fTrSec[trackingSector]->GetLayerNumber(gtb);
 
-    Int_t nl=fTrSec[(ns-1+max_sec)%max_sec][i2];
-    Int_t nm=fTrSec[ns][i2];
-    Int_t nu=fTrSec[(ns+1)%max_sec][i2];
+    index=ncl;
+    //
+    // apply pos correction
+    Transform(c);    
+    fTrSec[trackingSector]->GetLayer(layer)->InsertCluster(c,index);
+  }    
 
-    AliTRDtimeBin& r1=fTrSec[ns][i1];
+  return 0;
 
-    for (Int_t is=0; is < r1; is++) {
-      Double_t y1=r1[is]->GetY(), z1=r1[is]->GetZ();
+}
 
-      for (Int_t js=0; js < nl+nm+nu; js++) {
-       const AliTRDcluster *cl;
-        Double_t x2,   y2,   z2;
-        Double_t x3=0.,y3=0.;  
+//_____________________________________________________________________________
+void AliTRDtracker::UnloadClusters() 
+{ 
+  //
+  // Clears the arrays of clusters and tracks. Resets sectors and timebins 
+  //
 
-        if (js<nl) {
-         AliTRDtimeBin& r2=fTrSec[(ns-1+max_sec)%max_sec][i2];
-         cl=r2[js]; 
-         y2=cl->GetY(); z2=cl->GetZ();
+  Int_t i, nentr;
 
-          x2= xx2*cs+y2*sn;
-          y2=-xx2*sn+y2*cs;          
+  nentr = fClusters->GetEntriesFast();
+  for (i = 0; i < nentr; i++) delete fClusters->RemoveAt(i);
+  fNclusters = 0;
 
-        } else
-          if (js<nl+nm) {
-           AliTRDtimeBin& r2=fTrSec[ns][i2];
-           cl=r2[js-nl];
-           x2=xx2; y2=cl->GetY(); z2=cl->GetZ();
-          } else {
-           AliTRDtimeBin& r2=fTrSec[(ns+1)%max_sec][i2];
-            cl=r2[js-nl-nm];
-           y2=cl->GetY(); z2=cl->GetZ();
+  nentr = fSeeds->GetEntriesFast();
+  for (i = 0; i < nentr; i++) delete fSeeds->RemoveAt(i);
 
-            x2=xx2*cs-y2*sn;
-            y2=xx2*sn+y2*cs;   
+  nentr = fTracks->GetEntriesFast();
+  for (i = 0; i < nentr; i++) delete fTracks->RemoveAt(i);
 
-          }
+  Int_t nsec = AliTRDgeometry::kNsect;
 
-        Double_t zz=z1 - z1/x1*(x1-x2);
-       
-        if (TMath::Abs(zz-z2)>fMaxSeedDeltaZ) continue;   
-
-        Double_t d=(x2-x1)*(0.-y2)-(0.-x2)*(y2-y1);
-        if (d==0.) {cerr<<"TRD MakeSeeds: Straight seed !\n"; continue;}
-
-        x[0]=y1;
-        x[1]=z1;
-        x[2]=f1trd(x1,y1,x2,y2,x3,y3);
-
-        if (TMath::Abs(x[2]) >= fMaxSeedC) continue;
-
-        x[3]=f2trd(x1,y1,x2,y2,x3,y3);
-
-        if (TMath::Abs(x[2]*x1-x[3]) >= 0.99999) continue;
-
-        x[4]=f3trd(x1,y1,x2,y2,z1,z2);
-
-        if (TMath::Abs(x[4]) > fMaxSeedTan) continue;
-
-        Double_t a=asin(x[3]);
-        Double_t zv=z1 - x[4]/x[2]*(a+asin(x[2]*x1-x[3]));
-        if (TMath::Abs(zv)>fMaxSeedVertexZ) continue;    
-
-        Double_t sy1=r1[is]->GetSigmaY2(), sz1=r1[is]->GetSigmaZ2();
-        Double_t sy2=cl->GetSigmaY2(),     sz2=cl->GetSigmaZ2();
-        Double_t sy3=fSeedErrorSY3, sy=fSeedErrorSY, sz=fSeedErrorSZ;
-
-        Double_t f20=(f1trd(x1,y1+sy,x2,y2,x3,y3)-x[2])/sy;
-        Double_t f22=(f1trd(x1,y1,x2,y2+sy,x3,y3)-x[2])/sy;
-        Double_t f24=(f1trd(x1,y1,x2,y2,x3,y3+sy)-x[2])/sy;
-        Double_t f30=(f2trd(x1,y1+sy,x2,y2,x3,y3)-x[3])/sy;
-        Double_t f32=(f2trd(x1,y1,x2,y2+sy,x3,y3)-x[3])/sy;
-        Double_t f34=(f2trd(x1,y1,x2,y2,x3,y3+sy)-x[3])/sy;
-        Double_t f40=(f3trd(x1,y1+sy,x2,y2,z1,z2)-x[4])/sy;
-        Double_t f41=(f3trd(x1,y1,x2,y2,z1+sz,z2)-x[4])/sz;
-        Double_t f42=(f3trd(x1,y1,x2,y2+sy,z1,z2)-x[4])/sy;
-        Double_t f43=(f3trd(x1,y1,x2,y2,z1,z2+sz)-x[4])/sz;
-
-        c[0]=sy1;
-        c[1]=0.;       c[2]=sz1;
-        c[3]=f20*sy1;  c[4]=0.;       c[5]=f20*sy1*f20+f22*sy2*f22+f24*sy3*f24;
-        c[6]=f30*sy1;  c[7]=0.;       c[8]=f30*sy1*f20+f32*sy2*f22+f34*sy3*f24;
-                                      c[9]=f30*sy1*f30+f32*sy2*f32+f34*sy3*f34;
-        c[10]=f40*sy1; c[11]=f41*sz1; c[12]=f40*sy1*f20+f42*sy2*f22;
-        c[13]=f40*sy1*f30+f42*sy2*f32;
-        c[14]=f40*sy1*f40+f41*sz1*f41+f42*sy2*f42+f43*sz2*f43;   
-
-        UInt_t index=r1.GetIndex(is);
-        AliTRDtrack *track=new AliTRDtrack(index, x, c, x1, ns*alpha+shift); 
-
-        Int_t rc=FindProlongation(*track,fTrSec,ns,i2);
-       
-        if ((rc < 0) || 
-            (track->GetNclusters() < (i1-i2)*fMinClustersInSeed)) delete track;
-        else { 
-         fSeeds->AddLast(track); fNseeds++; 
-         cerr<<"found seed "<<fNseeds<<endl;
-       }
-      }
+  for (i = 0; i < nsec; i++) {    
+    for(Int_t pl = 0; pl < fTrSec[i]->GetNumberOfLayers(); pl++) {
+      fTrSec[i]->GetLayer(pl)->Clear();
     }
   }
 
-  fSeeds->Sort();
-}          
+}
 
-//___________________________________________________________________
-void AliTRDtracker::FindTracks() 
+//_____________________________________________________________________________
+void AliTRDtracker::MakeSeedsMI(Int_t /*inner*/, Int_t /*outer*/, AliESD * esd)
 {
-  if (!fClusters) return; 
+  //
+  // Creates  seeds using clusters between  position inner plane  and outer plane 
+  //
 
-  AliTRDtrackingSector fTrSec[AliTRDgeometry::kNsect];
-  SetUpSectors(fTrSec);
+  const Double_t kMaxTheta = 1;
+  const Double_t kMaxPhi   = 2.0;
+  //
+  const Double_t kRoad0y  =  6;     // road for middle cluster 
+  const Double_t kRoad0z  =  8.5;   // road for middle cluster 
+  //
+  const Double_t kRoad1y  =  2;    // road in y for seeded cluster
+  const Double_t kRoad1z  =  20;    // road in z for seeded cluster
+  //
+  const Double_t kRoad2y  =  3;    // road in y for extrapolated cluster
+  const Double_t kRoad2z  =  20;   // road in z for extrapolated cluster
+  const Int_t    kMaxSeed  = 3000;
+  Int_t maxSec=AliTRDgeometry::kNsect;  
 
-  // find tracks
+  //
+  // linear fitters in planes
+  TLinearFitter fitterTC(2,"hyp2");  // fitting with tilting pads - kz fixed - kz= Z/x, + vertex const
+  TLinearFitter fitterT2(4,"hyp4");  // fitting with tilting pads - kz not fixed
+  fitterTC.StoreData(kTRUE);
+  fitterT2.StoreData(kTRUE);
+  AliRieman rieman(1000);   // rieman fitter
+  AliRieman rieman2(1000);   // rieman fitter
+  //  
+  // find the maximal and minimal layer for the planes
+  //
+  Int_t layers[6][2];
+  AliTRDpropagationLayer* reflayers[6];
+  for (Int_t i=0;i<6;i++){layers[i][0]=10000; layers[i][1]=0;}
+  for (Int_t ns=0;ns<maxSec;ns++){
+    for (Int_t ilayer=0;ilayer<fTrSec[ns]->GetNumberOfLayers();ilayer++){
+      AliTRDpropagationLayer& layer=*(fTrSec[ns]->GetLayer(ilayer));
+      if (layer==0) continue;
+      Int_t det   = layer[0]->GetDetector();    
+      Int_t plane = fGeom->GetPlane(det);
+      if (ilayer<layers[plane][0]) layers[plane][0] = ilayer;
+      if (ilayer>layers[plane][1]) layers[plane][1] = ilayer;
+    }
+  }
+  //
+  AliTRDpadPlane *padPlane = AliTRDCommonParam::Instance()->GetPadPlane(0,0);
+  Double_t h01 = TMath::Tan(-TMath::Pi() / 180.0 * padPlane->GetTiltingAngle());
+  Double_t hL[6];         // tilting angle
+  Double_t xcl[6];        // x - position of reference cluster
+  Double_t ycl[6];        // y - position of reference cluster
+  Double_t zcl[6];        // z - position of reference cluster
+  AliTRDcluster *cl[6]={0,0,0,0,0,0};    // seeding clusters
+  Float_t padlength[6]={10,10,10,10,10,10};   //current pad-length 
+  Double_t chi2R =0, chi2Z=0;
+  Double_t chi2RF =0, chi2ZF=0;
+  //
+  Int_t nclusters;     // total number of clusters
+  for (Int_t i=0;i<6;i++) {hL[i]=h01; if (i%2==1) hL[i]*=-1.;}
+  //
+  //
+  //         registered seed
+  AliTRDseed *pseed = new AliTRDseed[kMaxSeed*6];
+  AliTRDseed *seed[kMaxSeed];
+  for (Int_t iseed=0;iseed<kMaxSeed;iseed++) seed[iseed]= &pseed[iseed*6];
+  AliTRDseed *cseed = seed[0];
+  // 
+  Double_t   seedquality[kMaxSeed];  
+  Double_t   seedquality2[kMaxSeed];  
+  Double_t   seedparams[kMaxSeed][7];
+  Int_t      seedlayer[kMaxSeed];
+  Int_t      registered =0;
+  Int_t      sort[kMaxSeed];
+  //
+  // seeding part
+  //
+  for (Int_t ns = 0; ns<maxSec; ns++){         //loop over sectors
+  //for (Int_t ns = 0; ns<5; ns++){         //loop over sectors
+    registered = 0;   // reset registerd seed counter
+    cseed      = seed[registered];
+    Float_t iter=0;
+    for (Int_t sLayer=2; sLayer>=0;sLayer--){
+      //for (Int_t dseed=5;dseed<15; dseed+=3){  //loop over central seeding time bins 
+      iter+=1.;
+      Int_t dseed = 5+Int_t(iter)*3;
+      // Initialize seeding layers
+      for (Int_t ilayer=0;ilayer<6;ilayer++){
+       reflayers[ilayer] = fTrSec[ns]->GetLayer(layers[ilayer][1]-dseed);
+       xcl[ilayer]       = reflayers[ilayer]->GetX();
+      }      
+      //
+      Double_t xref                 = (xcl[sLayer+1] + xcl[sLayer+2])*0.5;      
+      AliTRDpropagationLayer& layer0=*reflayers[sLayer+0];
+      AliTRDpropagationLayer& layer1=*reflayers[sLayer+1];
+      AliTRDpropagationLayer& layer2=*reflayers[sLayer+2];
+      AliTRDpropagationLayer& layer3=*reflayers[sLayer+3];
+      //
+      Int_t maxn3  = layer3;
+      for (Int_t icl3=0;icl3<maxn3;icl3++){
+       AliTRDcluster *cl3 = layer3[icl3];
+       if (!cl3) continue;     
+       padlength[sLayer+3] = TMath::Sqrt(cl3->GetSigmaZ2()*12.);
+       ycl[sLayer+3] = cl3->GetY();
+       zcl[sLayer+3] = cl3->GetZ();
+       Float_t yymin0 = ycl[sLayer+3] - 1- kMaxPhi *(xcl[sLayer+3]-xcl[sLayer+0]);
+       Float_t yymax0 = ycl[sLayer+3] + 1+ kMaxPhi *(xcl[sLayer+3]-xcl[sLayer+0]);
+       Int_t   maxn0 = layer0;  // 
+       for (Int_t icl0=layer0.Find(yymin0);icl0<maxn0;icl0++){
+         AliTRDcluster *cl0 = layer0[icl0];
+         if (!cl0) continue;
+         if (cl3->IsUsed()&&cl0->IsUsed()) continue;
+         ycl[sLayer+0] = cl0->GetY();
+         zcl[sLayer+0] = cl0->GetZ();
+         if ( ycl[sLayer+0]>yymax0) break;
+         Double_t tanphi   = (ycl[sLayer+3]-ycl[sLayer+0])/(xcl[sLayer+3]-xcl[sLayer+0]); 
+         if (TMath::Abs(tanphi)>kMaxPhi) continue;
+         Double_t tantheta = (zcl[sLayer+3]-zcl[sLayer+0])/(xcl[sLayer+3]-xcl[sLayer+0]); 
+         if (TMath::Abs(tantheta)>kMaxTheta) continue; 
+         padlength[sLayer+0] = TMath::Sqrt(cl0->GetSigmaZ2()*12.);
+         //
+         // expected position in 1 layer
+         Double_t y1exp = ycl[sLayer+0]+(tanphi)  *(xcl[sLayer+1]-xcl[sLayer+0]);        
+         Double_t z1exp = zcl[sLayer+0]+(tantheta)*(xcl[sLayer+1]-xcl[sLayer+0]);        
+         Float_t yymin1 = y1exp - kRoad0y-tanphi;
+         Float_t yymax1 = y1exp + kRoad0y+tanphi;
+         Int_t   maxn1  = layer1;  // 
+         //
+         for (Int_t icl1=layer1.Find(yymin1);icl1<maxn1;icl1++){
+           AliTRDcluster *cl1 = layer1[icl1];
+           if (!cl1) continue;
+           Int_t nusedCl = 0;
+           if (cl3->IsUsed()) nusedCl++;
+           if (cl0->IsUsed()) nusedCl++;
+           if (cl1->IsUsed()) nusedCl++;
+           if (nusedCl>1) continue;
+           ycl[sLayer+1] = cl1->GetY();
+           zcl[sLayer+1] = cl1->GetZ();
+           if ( ycl[sLayer+1]>yymax1) break;
+           if (TMath::Abs(ycl[sLayer+1]-y1exp)>kRoad0y+tanphi) continue;
+           if (TMath::Abs(zcl[sLayer+1]-z1exp)>kRoad0z)        continue;
+           padlength[sLayer+1] = TMath::Sqrt(cl1->GetSigmaZ2()*12.);
+           //
+           Double_t y2exp  = ycl[sLayer+0]+(tanphi)  *(xcl[sLayer+2]-xcl[sLayer+0])+(ycl[sLayer+1]-y1exp);       
+           Double_t z2exp  = zcl[sLayer+0]+(tantheta)*(xcl[sLayer+2]-xcl[sLayer+0]);
+           Int_t    index2 = layer2.FindNearestCluster(y2exp,z2exp,kRoad1y,  kRoad1z);
+           if (index2<=0) continue; 
+           AliTRDcluster *cl2 = (AliTRDcluster*)GetCluster(index2);
+           padlength[sLayer+2] = TMath::Sqrt(cl2->GetSigmaZ2()*12.);
+           ycl[sLayer+2] = cl2->GetY();
+           zcl[sLayer+2] = cl2->GetZ();
+           if (TMath::Abs(cl2->GetZ()-z2exp)>kRoad0z)        continue;
+           //
+           rieman.Reset();
+           rieman.AddPoint(xcl[sLayer+0],ycl[sLayer+0],zcl[sLayer+0],1,10);
+           rieman.AddPoint(xcl[sLayer+1],ycl[sLayer+1],zcl[sLayer+1],1,10);
+           rieman.AddPoint(xcl[sLayer+3],ycl[sLayer+3],zcl[sLayer+3],1,10);        
+           rieman.AddPoint(xcl[sLayer+2],ycl[sLayer+2],zcl[sLayer+2],1,10);
+           rieman.Update();
+           //
+           // reset fitter
+           for (Int_t iLayer=0;iLayer<6;iLayer++){
+             cseed[iLayer].Reset();
+           }     
+           chi2Z =0.; chi2R=0.;
+           for (Int_t iLayer=0;iLayer<4;iLayer++){
+             cseed[sLayer+iLayer].fZref[0] = rieman.GetZat(xcl[sLayer+iLayer]);
+             chi2Z += (cseed[sLayer+iLayer].fZref[0]- zcl[sLayer+iLayer])*
+               (cseed[sLayer+iLayer].fZref[0]- zcl[sLayer+iLayer]);
+             cseed[sLayer+iLayer].fZref[1] = rieman.GetDZat(xcl[sLayer+iLayer]);             
+             cseed[sLayer+iLayer].fYref[0] = rieman.GetYat(xcl[sLayer+iLayer]);
+             chi2R += (cseed[sLayer+iLayer].fYref[0]- ycl[sLayer+iLayer])*
+               (cseed[sLayer+iLayer].fYref[0]- ycl[sLayer+iLayer]);
+             cseed[sLayer+iLayer].fYref[1] = rieman.GetDYat(xcl[sLayer+iLayer]);
+           }
+           if (TMath::Sqrt(chi2R)>1./iter) continue;
+           if (TMath::Sqrt(chi2Z)>7./iter) continue;
+           //
+           //
+           //
+           Float_t minmax[2]={-100,100};
+           for (Int_t iLayer=0;iLayer<4;iLayer++){
+             Float_t max = zcl[sLayer+iLayer]+padlength[sLayer+iLayer]*0.5+1 -cseed[sLayer+iLayer].fZref[0];
+             if (max<minmax[1]) minmax[1]=max; 
+             Float_t min = zcl[sLayer+iLayer]-padlength[sLayer+iLayer]*0.5-1 -cseed[sLayer+iLayer].fZref[0];
+             if (min>minmax[0]) minmax[0]=min; 
+           }
+           Bool_t isFake = kFALSE; 
+           if (cl0->GetLabel(0)!=cl3->GetLabel(0)) isFake = kTRUE;
+           if (cl1->GetLabel(0)!=cl3->GetLabel(0)) isFake = kTRUE;
+           if (cl2->GetLabel(0)!=cl3->GetLabel(0)) isFake = kTRUE;
+           if (AliTRDReconstructor::StreamLevel()>0){
+             if ((!isFake) || (icl3%10)==0 ){  //debugging print
+               TTreeSRedirector& cstream = *fDebugStreamer;
+               cstream<<"Seeds0"<<
+                 "isFake="<<isFake<<
+                 "Cl0.="<<cl0<<
+                 "Cl1.="<<cl1<<
+                 "Cl2.="<<cl2<<
+                 "Cl3.="<<cl3<<
+                 "Xref="<<xref<<
+                 "X0="<<xcl[sLayer+0]<<
+                 "X1="<<xcl[sLayer+1]<<
+                 "X2="<<xcl[sLayer+2]<<
+                 "X3="<<xcl[sLayer+3]<<
+                 "Y2exp="<<y2exp<<
+                 "Z2exp="<<z2exp<<
+                 "Chi2R="<<chi2R<<
+                 "Chi2Z="<<chi2Z<<             
+                 "Seed0.="<<&cseed[sLayer+0]<<
+                 "Seed1.="<<&cseed[sLayer+1]<<
+                 "Seed2.="<<&cseed[sLayer+2]<<
+                 "Seed3.="<<&cseed[sLayer+3]<<
+                 "Zmin="<<minmax[0]<<
+                 "Zmax="<<minmax[1]<<
+                 "\n";
+             }
+           }
+           
+           //<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<
+           //<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<
+           //<<<<<<<<<<<<<<<<<<    FIT SEEDING PART                  <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<
+           //<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<
+           cl[sLayer+0] = cl0;
+           cl[sLayer+1] = cl1;
+           cl[sLayer+2] = cl2;
+           cl[sLayer+3] = cl3;
+           Bool_t isOK=kTRUE;
+           for (Int_t jLayer=0;jLayer<4;jLayer++){
+             cseed[sLayer+jLayer].fTilt = hL[sLayer+jLayer];
+             cseed[sLayer+jLayer].fPadLength = padlength[sLayer+jLayer];
+             cseed[sLayer+jLayer].fX0   = xcl[sLayer+jLayer];
+             for (Int_t iter=0; iter<2; iter++){
+               //
+               // in iteration 0 we try only one pad-row
+               // if quality not sufficient we try 2 pad-rows - about 5% of tracks cross 2 pad-rows
+               //
+               AliTRDseed tseed = cseed[sLayer+jLayer];
+               Float_t    roadz  = padlength[sLayer+jLayer]*0.5;
+               if (iter>0) roadz = padlength[sLayer+jLayer];
+               //
+               Float_t quality =10000;
+               for (Int_t iTime=2;iTime<20;iTime++){ 
+                 AliTRDpropagationLayer& layer = *(fTrSec[ns]->GetLayer(layers[sLayer+jLayer][1]-iTime));
+                 Double_t dxlayer= layer.GetX()-xcl[sLayer+jLayer];             
+                 Double_t zexp   = cl[sLayer+jLayer]->GetZ() ;
+                 if (iter>0){
+                   // try 2 pad-rows in second iteration
+                   zexp  = tseed.fZref[0]+ tseed.fZref[1]*dxlayer;
+                   if (zexp>cl[sLayer+jLayer]->GetZ()) zexp = cl[sLayer+jLayer]->GetZ()+padlength[sLayer+jLayer]*0.5;
+                   if (zexp<cl[sLayer+jLayer]->GetZ()) zexp = cl[sLayer+jLayer]->GetZ()-padlength[sLayer+jLayer]*0.5;
+                 }
+                 //
+                 Double_t yexp  =  tseed.fYref[0]+ 
+                   tseed.fYref[1]*dxlayer;
+                 Int_t    index = layer.FindNearestCluster(yexp,zexp,kRoad1y, roadz);
+                 if (index<=0) continue; 
+                 AliTRDcluster *cl = (AliTRDcluster*)GetCluster(index);              
+                 //
+                 tseed.fIndexes[iTime]  = index;
+                 tseed.fClusters[iTime] = cl;   // register cluster
+                 tseed.fX[iTime] = dxlayer;     // register cluster
+                 tseed.fY[iTime] = cl->GetY();  // register cluster
+                 tseed.fZ[iTime] = cl->GetZ();  // register cluster
+               } 
+               tseed.Update();
+               //count the number of clusters and distortions into quality
+               Float_t dangle = tseed.fYfit[1]-tseed.fYref[1];
+               Float_t tquality   = (18-tseed.fN2)/2. + TMath::Abs(dangle)/0.1+
+                 TMath::Abs(tseed.fYfit[0]-tseed.fYref[0])/0.2+
+                 2.*TMath::Abs(tseed.fMeanz-tseed.fZref[0])/padlength[jLayer];
+               if (iter==0 && tseed.IsOK()) {
+                 cseed[sLayer+jLayer] = tseed;
+                 quality = tquality;
+                 if (tquality<5) break;  
+               }
+               if (tseed.IsOK() && tquality<quality)
+                 cseed[sLayer+jLayer] = tseed;                         
+             }
+             if (!cseed[sLayer+jLayer].IsOK()){
+               isOK = kFALSE;
+               break;
+             }                   
+             cseed[sLayer+jLayer].CookLabels();
+             cseed[sLayer+jLayer].UpdateUsed();
+             nusedCl+= cseed[sLayer+jLayer].fNUsed;
+             if (nusedCl>25){
+               isOK = kFALSE;
+               break;
+             }     
+           }
+           //
+           if (!isOK) continue;
+           nclusters=0;
+           for (Int_t iLayer=0;iLayer<4;iLayer++){
+             if (cseed[sLayer+iLayer].IsOK()){
+               nclusters+=cseed[sLayer+iLayer].fN2;        
+             }
+           }
+           // 
+           // iteration 0
+           rieman.Reset();
+           for (Int_t iLayer=0;iLayer<4;iLayer++){
+             rieman.AddPoint(xcl[sLayer+iLayer],cseed[sLayer+iLayer].fYfitR[0],
+                             cseed[sLayer+iLayer].fZProb,1,10);
+           }
+           rieman.Update();
+           //
+           //
+           chi2R =0; chi2Z=0;
+           for (Int_t iLayer=0;iLayer<4;iLayer++){
+             cseed[sLayer+iLayer].fYref[0] = rieman.GetYat(xcl[sLayer+iLayer]);
+             chi2R += (cseed[sLayer+iLayer].fYref[0]-cseed[sLayer+iLayer].fYfitR[0])*
+               (cseed[sLayer+iLayer].fYref[0]-cseed[sLayer+iLayer].fYfitR[0]);
+             cseed[sLayer+iLayer].fYref[1] = rieman.GetDYat(xcl[sLayer+iLayer]);
+             cseed[sLayer+iLayer].fZref[0] = rieman.GetZat(xcl[sLayer+iLayer]);
+             chi2Z += (cseed[sLayer+iLayer].fZref[0]- cseed[sLayer+iLayer].fMeanz)*
+               (cseed[sLayer+iLayer].fZref[0]- cseed[sLayer+iLayer].fMeanz);
+             cseed[sLayer+iLayer].fZref[1] = rieman.GetDZat(xcl[sLayer+iLayer]);
+           }
+           Double_t curv = rieman.GetC();
+           //
+           // likelihoods
+           //
+           Double_t sumda = 
+             TMath::Abs(cseed[sLayer+0].fYfitR[1]- cseed[sLayer+0].fYref[1])+
+             TMath::Abs(cseed[sLayer+1].fYfitR[1]- cseed[sLayer+1].fYref[1])+
+             TMath::Abs(cseed[sLayer+2].fYfitR[1]- cseed[sLayer+2].fYref[1])+
+             TMath::Abs(cseed[sLayer+3].fYfitR[1]- cseed[sLayer+3].fYref[1]);
+           Double_t likea = TMath::Exp(-sumda*10.6);
+           Double_t likechi2 = 0.0000000001;
+           if (chi2R<0.5) likechi2+=TMath::Exp(-TMath::Sqrt(chi2R)*7.73);
+           Double_t likechi2z = TMath::Exp(-chi2Z*0.088)/TMath::Exp(-chi2Z*0.019);
+           Double_t likeN    = TMath::Exp(-(72-nclusters)*0.19);
+           Double_t like     = likea*likechi2*likechi2z*likeN;
+           //
+           Double_t likePrimY = TMath::Exp(-TMath::Abs(cseed[sLayer+0].fYref[1]-130*curv)*1.9);
+           Double_t likePrimZ = TMath::Exp(-TMath::Abs(cseed[sLayer+0].fZref[1]-
+                                                       cseed[sLayer+0].fZref[0]/xcl[sLayer+0])*5.9);
+           Double_t likePrim  = TMath::Max(likePrimY*likePrimZ,0.0005);
+                                           
+           seedquality[registered]  = like; 
+           seedlayer[registered]    = sLayer;
+           if (TMath::Log(0.000000000000001+like)<-15) continue;
+           AliTRDseed seedb[6];
+           for (Int_t iLayer=0;iLayer<6;iLayer++){
+             seedb[iLayer] = cseed[iLayer]; 
+           }
+           //
+           //<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<
+           //<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<
+           //<<<<<<<<<<<<<<<   FULL TRACK FIT PART         <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<
+           //<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<
+           //
+           Int_t nlayers            = 0;
+           Int_t nusedf             = 0;
+           Int_t findable           = 0;
+           //
+           // add new layers  - avoid long extrapolation
+           //
+           Int_t tLayer[2]={0,0};
+           if (sLayer==2) {tLayer[0]=1; tLayer[1]=0;}
+           if (sLayer==1) {tLayer[0]=5; tLayer[1]=0;}
+           if (sLayer==0) {tLayer[0]=4; tLayer[1]=5;}
+           //
+           for (Int_t iLayer=0;iLayer<2;iLayer++){
+             Int_t jLayer = tLayer[iLayer];      // set tracking layer       
+             cseed[jLayer].Reset();
+             cseed[jLayer].fTilt    = hL[jLayer];
+             cseed[jLayer].fPadLength = padlength[jLayer];
+             cseed[jLayer].fX0      = xcl[jLayer];
+             // get pad length and rough cluster
+             Int_t    indexdummy = reflayers[jLayer]->FindNearestCluster(cseed[jLayer].fYref[0], 
+                                                                         cseed[jLayer].fZref[0],kRoad2y,kRoad2z);
+             if (indexdummy<=0) continue; 
+             AliTRDcluster *cldummy = (AliTRDcluster*)GetCluster(indexdummy);
+             padlength[jLayer]      = TMath::Sqrt(cldummy->GetSigmaZ2()*12.);
+           }
+           AliTRDseed::FitRiemanTilt(cseed, kTRUE);
+           //
+           for (Int_t iLayer=0;iLayer<2;iLayer++){
+             Int_t jLayer = tLayer[iLayer];      // set tracking layer 
+             if ( (jLayer==0) && !(cseed[1].IsOK())) continue;  // break not allowed
+             if ( (jLayer==5) && !(cseed[4].IsOK())) continue;  // break not allowed
+             Float_t  zexp  = cseed[jLayer].fZref[0];
+             Double_t zroad =  padlength[jLayer]*0.5+1.;
+             //
+             // 
+             for (Int_t iter=0;iter<2;iter++){
+               AliTRDseed tseed = cseed[jLayer];
+               Float_t quality = 10000;
+               for (Int_t iTime=2;iTime<20;iTime++){ 
+                 AliTRDpropagationLayer& layer = *(fTrSec[ns]->GetLayer(layers[jLayer][1]-iTime));
+                 Double_t dxlayer     = layer.GetX()-xcl[jLayer];
+                 Double_t yexp        = tseed.fYref[0]+tseed.fYref[1]*dxlayer;
+                 Float_t  yroad       = kRoad1y;
+                 Int_t    index = layer.FindNearestCluster(yexp,zexp, yroad, zroad);
+                 if (index<=0) continue; 
+                 AliTRDcluster *cl = (AliTRDcluster*)GetCluster(index);              
+                 //
+                 tseed.fIndexes[iTime]  = index;
+                 tseed.fClusters[iTime] = cl;   // register cluster
+                 tseed.fX[iTime] = dxlayer;     // register cluster
+                 tseed.fY[iTime] = cl->GetY();  // register cluster
+                 tseed.fZ[iTime] = cl->GetZ();  // register cluster
+               }             
+               tseed.Update();
+               if (tseed.IsOK()){
+                 Float_t dangle = tseed.fYfit[1]-tseed.fYref[1];
+                 Float_t tquality   = (18-tseed.fN2)/2. + TMath::Abs(dangle)/0.1+                
+                   TMath::Abs(tseed.fYfit[0]-tseed.fYref[0])/0.2+ 
+                   2.*TMath::Abs(tseed.fMeanz-tseed.fZref[0])/padlength[jLayer];
+                 //
+                 if (tquality<quality){
+                   cseed[jLayer]=tseed;
+                   quality = tquality;
+                 }
+               }
+               zroad*=2.;
+             }
+             if ( cseed[jLayer].IsOK()){
+               cseed[jLayer].CookLabels();
+               cseed[jLayer].UpdateUsed();
+               nusedf+= cseed[jLayer].fNUsed;
+               AliTRDseed::FitRiemanTilt(cseed, kTRUE);
+             }
+           }
+           //
+           //
+           // make copy
+           AliTRDseed bseed[6];
+           for (Int_t jLayer=0;jLayer<6;jLayer++){
+             bseed[jLayer] = cseed[jLayer];
+           }       
+           Float_t lastquality = 10000;
+           Float_t lastchi2    = 10000;
+           Float_t chi2        = 1000;
+
+           //
+           for (Int_t iter =0; iter<4;iter++){
+             //
+             // sort tracklets according "quality", try to "improve" 4 worst 
+             //
+             Float_t sumquality = 0;
+             Float_t squality[6];
+             Int_t   sortindexes[6];
+             for (Int_t jLayer=0;jLayer<6;jLayer++){
+               if (bseed[jLayer].IsOK()){ 
+                 AliTRDseed &tseed = bseed[jLayer];
+                 Double_t zcor  =  tseed.fTilt*(tseed.fZProb-tseed.fZref[0]);
+                 Float_t dangle = tseed.fYfit[1]-tseed.fYref[1];
+                 Float_t tquality  = (18-tseed.fN2)/2. + TMath::Abs(dangle)/0.1+                 
+                   TMath::Abs(tseed.fYfit[0]-(tseed.fYref[0]-zcor))/0.2+ 
+                   2.*TMath::Abs(tseed.fMeanz-tseed.fZref[0])/padlength[jLayer];
+                 squality[jLayer] = tquality;
+               }
+               else  squality[jLayer]=-1;
+               sumquality +=squality[jLayer];
+             }
+
+             if (sumquality>=lastquality ||  chi2>lastchi2) break;
+             lastquality = sumquality;  
+             lastchi2    = chi2;
+             if (iter>0){
+               for (Int_t jLayer=0;jLayer<6;jLayer++){
+                 cseed[jLayer] = bseed[jLayer];
+               }
+             }
+             TMath::Sort(6,squality,sortindexes,kFALSE);
+             //
+             //
+             for (Int_t jLayer=5;jLayer>1;jLayer--){
+               Int_t bLayer = sortindexes[jLayer];
+               AliTRDseed tseed = bseed[bLayer];
+               for (Int_t iTime=2;iTime<20;iTime++){ 
+                 AliTRDpropagationLayer& layer = *(fTrSec[ns]->GetLayer(layers[bLayer][1]-iTime));
+                 Double_t dxlayer= layer.GetX()-xcl[bLayer];
+                 //
+                 Double_t zexp  =  tseed.fZref[0];
+                 Double_t zcor  =  tseed.fTilt*(tseed.fZProb-tseed.fZref[0]);
+                 //
+                 Float_t  roadz = padlength[bLayer]+1;
+                 if (TMath::Abs(tseed.fZProb-zexp)> padlength[bLayer]*0.5) {roadz = padlength[bLayer]*0.5;}
+                 if (tseed.fZfit[1]*tseed.fZref[1]<0) {roadz = padlength[bLayer]*0.5;}
+                 if (TMath::Abs(tseed.fZProb-zexp)<0.1*padlength[bLayer]) {
+                   zexp = tseed.fZProb; 
+                   roadz = padlength[bLayer]*0.5;
+                 }
+                 //
+                 Double_t yexp  =  tseed.fYref[0]+ 
+                   tseed.fYref[1]*dxlayer-zcor;
+                 Int_t    index = layer.FindNearestCluster(yexp,zexp,kRoad1y, roadz);
+                 if (index<=0) continue; 
+                 AliTRDcluster *cl = (AliTRDcluster*)GetCluster(index);              
+                 //
+                 tseed.fIndexes[iTime]  = index;
+                 tseed.fClusters[iTime] = cl;   // register cluster
+                 tseed.fX[iTime] = dxlayer;     // register cluster
+                 tseed.fY[iTime] = cl->GetY();  // register cluster
+                 tseed.fZ[iTime] = cl->GetZ();  // register cluster
+               } 
+               tseed.Update();
+               if (tseed.IsOK()) {
+                 Float_t dangle = tseed.fYfit[1]-tseed.fYref[1];
+                 Double_t zcor  =  tseed.fTilt*(tseed.fZProb-tseed.fZref[0]);
+                 //
+                 Float_t tquality   = (18-tseed.fN2)/2. + TMath::Abs(dangle)/0.1+                
+                   TMath::Abs(tseed.fYfit[0]-(tseed.fYref[0]-zcor))/0.2+ 
+                   2.*TMath::Abs(tseed.fMeanz-tseed.fZref[0])/padlength[jLayer];
+                 //
+                 if (tquality<squality[bLayer])
+                   bseed[bLayer] = tseed;
+               }
+             }
+             chi2 = AliTRDseed::FitRiemanTilt(bseed, kTRUE);
+           }
+           //
+           //
+           //
+           nclusters  = 0;
+           nlayers    = 0;
+           findable   = 0;
+           for (Int_t iLayer=0;iLayer<6;iLayer++) {
+             if (TMath::Abs(cseed[iLayer].fYref[0]/cseed[iLayer].fX0)<0.15)
+               findable++;
+             if (cseed[iLayer].IsOK()){
+               nclusters+=cseed[iLayer].fN2;       
+               nlayers++;
+             }
+           }
+           if (nlayers<3) continue;
+           rieman.Reset();
+           for (Int_t iLayer=0;iLayer<6;iLayer++){
+             if (cseed[iLayer].IsOK()) rieman.AddPoint(xcl[iLayer],cseed[iLayer].fYfitR[0],
+                                                                  cseed[iLayer].fZProb,1,10);
+           }
+           rieman.Update();
+           //
+           chi2RF =0;
+           chi2ZF =0;
+           for (Int_t iLayer=0;iLayer<6;iLayer++){
+             if (cseed[iLayer].IsOK()){
+               cseed[iLayer].fYref[0] = rieman.GetYat(xcl[iLayer]);
+               chi2RF += (cseed[iLayer].fYref[0]-cseed[iLayer].fYfitR[0])*
+                 (cseed[iLayer].fYref[0]-cseed[iLayer].fYfitR[0]);
+               cseed[iLayer].fYref[1] = rieman.GetDYat(xcl[iLayer]);
+               cseed[iLayer].fZref[0] = rieman.GetZat(xcl[iLayer]);
+               chi2ZF += (cseed[iLayer].fZref[0]- cseed[iLayer].fMeanz)*
+                 (cseed[iLayer].fZref[0]- cseed[iLayer].fMeanz);
+               cseed[iLayer].fZref[1] = rieman.GetDZat(xcl[iLayer]);
+             }
+           }
+           chi2RF/=TMath::Max((nlayers-3.),1.);
+           chi2ZF/=TMath::Max((nlayers-3.),1.);
+           curv = rieman.GetC();
+           
+           //
+
+           Double_t xref2    = (xcl[2]+xcl[3])*0.5;  // middle of the chamber
+           Double_t dzmf     = rieman.GetDZat(xref2);
+           Double_t zmf      = rieman.GetZat(xref2);
+           //
+           // fit hyperplane
+           //
+           Int_t npointsT =0;
+           fitterTC.ClearPoints();
+           fitterT2.ClearPoints();
+           rieman2.Reset();
+           for (Int_t iLayer=0; iLayer<6;iLayer++){
+             if (!cseed[iLayer].IsOK()) continue;
+             for (Int_t itime=0;itime<25;itime++){
+               if (!cseed[iLayer].fUsable[itime]) continue;
+               Double_t x   = cseed[iLayer].fX[itime]+cseed[iLayer].fX0-xref2;  // x relative to the midle chamber
+               Double_t y   = cseed[iLayer].fY[itime];
+               Double_t z   = cseed[iLayer].fZ[itime];
+               // ExB correction to the correction
+               // tilted rieman
+               //
+               Double_t uvt[6];
+               Double_t x2 = cseed[iLayer].fX[itime]+cseed[iLayer].fX0;      // global x
+               //              
+               Double_t t = 1./(x2*x2+y*y);
+               uvt[1]  = t;    // t
+               uvt[0]  = 2.*x2*uvt[1];      // u 
+               //
+               uvt[2]  = 2.0*hL[iLayer]*uvt[1];
+               uvt[3]  = 2.0*hL[iLayer]*x*uvt[1];            
+               uvt[4]  = 2.0*(y+hL[iLayer]*z)*uvt[1];
+               //
+               Double_t error = 2*0.2*uvt[1];
+               fitterT2.AddPoint(uvt,uvt[4],error);
+               //
+               // constrained rieman
+               // 
+               z =cseed[iLayer].fZ[itime];
+               uvt[0]  = 2.*x2*t;           // u 
+               uvt[1]  = 2*hL[iLayer]*x2*uvt[1];             
+               uvt[2]  = 2*(y+hL[iLayer]*(z-GetZ()))*t;
+               fitterTC.AddPoint(uvt,uvt[2],error);
+               //              
+               rieman2.AddPoint(x2,y,z,1,10);
+               npointsT++;
+             }
+           }
+           rieman2.Update();
+           fitterTC.Eval();
+           fitterT2.Eval();
+           Double_t rpolz0 = fitterT2.GetParameter(3);
+           Double_t rpolz1 = fitterT2.GetParameter(4);     
+           //
+           // linear fitter  - not possible to make boundaries
+           // non accept non possible z and dzdx combination
+           //      
+           Bool_t   acceptablez =kTRUE;
+           for (Int_t iLayer=0; iLayer<6;iLayer++){
+             if (cseed[iLayer].IsOK()){
+               Double_t zT2 =  rpolz0+rpolz1*(xcl[iLayer] - xref2);
+               if (TMath::Abs(cseed[iLayer].fZProb-zT2)>padlength[iLayer]*0.5+1)
+                 acceptablez = kFALSE;
+             }
+           }
+           if (!acceptablez){
+             fitterT2.FixParameter(3,zmf);
+             fitterT2.FixParameter(4,dzmf);
+             fitterT2.Eval();
+             fitterT2.ReleaseParameter(3);
+             fitterT2.ReleaseParameter(4);
+             rpolz0 = fitterT2.GetParameter(3);
+             rpolz1 = fitterT2.GetParameter(4);
+           }
+           //
+           Double_t chi2TR = fitterT2.GetChisquare()/Float_t(npointsT);
+           Double_t chi2TC = fitterTC.GetChisquare()/Float_t(npointsT);
+           //
+           Double_t polz1c = fitterTC.GetParameter(2);
+           Double_t polz0c = polz1c*xref2;
+           //
+           Double_t aC     =  fitterTC.GetParameter(0);
+           Double_t bC     =  fitterTC.GetParameter(1);
+           Double_t cC     =  aC/TMath::Sqrt(bC*bC+1.);     // curvature
+           //
+           Double_t aR     =  fitterT2.GetParameter(0);
+           Double_t bR     =  fitterT2.GetParameter(1);
+           Double_t dR     =  fitterT2.GetParameter(2);            
+           Double_t cR     =  1+bR*bR-dR*aR;
+           Double_t dca    =  0.;          
+           if (cR>0){
+             dca = -dR/(TMath::Sqrt(1+bR*bR-dR*aR)+TMath::Sqrt(1+bR*bR)); 
+             cR  = aR/TMath::Sqrt(cR);
+           }
+           //
+           Double_t chi2ZT2=0, chi2ZTC=0;
+           for (Int_t iLayer=0; iLayer<6;iLayer++){
+             if (cseed[iLayer].IsOK()){
+               Double_t zT2 =  rpolz0+rpolz1*(xcl[iLayer] - xref2);
+               Double_t zTC =  polz0c+polz1c*(xcl[iLayer] - xref2);
+               chi2ZT2 += TMath::Abs(cseed[iLayer].fMeanz-zT2);
+               chi2ZTC += TMath::Abs(cseed[iLayer].fMeanz-zTC);
+             }
+           }
+           chi2ZT2/=TMath::Max((nlayers-3.),1.);
+           chi2ZTC/=TMath::Max((nlayers-3.),1.);           
+           //
+           //
+           //
+           AliTRDseed::FitRiemanTilt(cseed, kTRUE);
+           Float_t sumdaf = 0;
+           for (Int_t iLayer=0;iLayer<6;iLayer++){
+             if (cseed[iLayer].IsOK())
+               sumdaf += TMath::Abs((cseed[iLayer].fYfit[1]-cseed[iLayer].fYref[1])/cseed[iLayer].fSigmaY2);
+           }  
+           sumdaf /= Float_t (nlayers-2.);
+           //
+           // likelihoods for full track
+           //
+           Double_t likezf      = TMath::Exp(-chi2ZF*0.14);
+           Double_t likechi2C   = TMath::Exp(-chi2TC*0.677);
+           Double_t likechi2TR  = TMath::Exp(-chi2TR*0.78);
+           Double_t likeaf      = TMath::Exp(-sumdaf*3.23);
+           seedquality2[registered] = likezf*likechi2TR*likeaf; 
+//         Bool_t isGold = kFALSE;
+//         
+//         if (nlayers == 6        && TMath::Log(0.000000001+seedquality2[index])<-5.) isGold =kTRUE;   // gold
+//         if (nlayers == findable && TMath::Log(0.000000001+seedquality2[index])<-4.) isGold =kTRUE;   // gold
+//         if (isGold &&nusedf<10){
+//           for (Int_t jLayer=0;jLayer<6;jLayer++){
+//             if ( seed[index][jLayer].IsOK()&&TMath::Abs(seed[index][jLayer].fYfit[1]-seed[index][jLayer].fYfit[1])<0.1)
+//               seed[index][jLayer].UseClusters();  //sign gold
+//           }
+//         }
+           //
+           //
+           //
+           Int_t index0=0;
+           if (!cseed[0].IsOK()){
+             index0 = 1;
+             if (!cseed[1].IsOK()) index0 = 2;
+           }
+           seedparams[registered][0] = cseed[index0].fX0;
+           seedparams[registered][1] = cseed[index0].fYref[0];
+           seedparams[registered][2] = cseed[index0].fZref[0];
+           seedparams[registered][5] = cR;
+           seedparams[registered][3] = cseed[index0].fX0*cR - TMath::Sin(TMath::ATan(cseed[0].fYref[1]));
+           seedparams[registered][4] = cseed[index0].fZref[1]/       
+             TMath::Sqrt(1+cseed[index0].fYref[1]*cseed[index0].fYref[1]);
+           seedparams[registered][6] = ns;
+           //
+           //
+           Int_t labels[12], outlab[24];
+           Int_t nlab=0;
+           for (Int_t iLayer=0;iLayer<6;iLayer++){
+             if (!cseed[iLayer].IsOK()) continue;
+             if (cseed[iLayer].fLabels[0]>=0) {
+               labels[nlab] = cseed[iLayer].fLabels[0];
+               nlab++;
+             }
+             if (cseed[iLayer].fLabels[1]>=0) {
+               labels[nlab] = cseed[iLayer].fLabels[1];
+               nlab++;
+             }       
+           }
+           Freq(nlab,labels,outlab,kFALSE);
+           Int_t label = outlab[0];
+           Int_t frequency  = outlab[1];
+           for (Int_t iLayer=0;iLayer<6;iLayer++){
+             cseed[iLayer].fFreq  = frequency;
+             cseed[iLayer].fC     = cR;
+             cseed[iLayer].fCC     = cC;
+             cseed[iLayer].fChi2  = chi2TR;
+             cseed[iLayer].fChi2Z = chi2ZF;
+           }
+           //
+           if (1||(!isFake)){  //debugging print
+             Float_t zvertex = GetZ();
+             TTreeSRedirector& cstream = *fDebugStreamer;
+             if (AliTRDReconstructor::StreamLevel()>0)
+             cstream<<"Seeds1"<<
+               "isFake="<<isFake<<
+               "Vertex="<<zvertex<<
+               "Rieman2.="<<&rieman2<<
+               "Rieman.="<<&rieman<<
+               "Xref="<<xref<<
+               "X0="<<xcl[0]<<
+               "X1="<<xcl[1]<<
+               "X2="<<xcl[2]<<
+               "X3="<<xcl[3]<<
+               "X4="<<xcl[4]<<
+               "X5="<<xcl[5]<<
+               "Chi2R="<<chi2R<<
+               "Chi2Z="<<chi2Z<<
+               "Chi2RF="<<chi2RF<<                          //chi2 of trackletes on full track
+               "Chi2ZF="<<chi2ZF<<                          //chi2 z on tracklets on full track
+               "Chi2ZT2="<<chi2ZT2<<                        //chi2 z on tracklets on full track  - rieman tilt
+               "Chi2ZTC="<<chi2ZTC<<                        //chi2 z on tracklets on full track  - rieman tilt const
+               //
+               "Chi2TR="<<chi2TR<<                           //chi2 without vertex constrain
+               "Chi2TC="<<chi2TC<<                           //chi2 with    vertex constrain
+               "C="<<curv<<                                  // non constrained - no tilt correction
+               "DR="<<dR<<                                   // DR parameter          - tilt correction
+               "DCA="<<dca<<                                 // DCA                   - tilt correction
+               "CR="<<cR<<                                   // non constrained curvature - tilt correction
+               "CC="<<cC<<                                   // constrained curvature
+               "Polz0="<<polz0c<<
+               "Polz1="<<polz1c<<
+               "RPolz0="<<rpolz0<<
+               "RPolz1="<<rpolz1<<
+               "Ncl="<<nclusters<<
+               "Nlayers="<<nlayers<<
+               "NUsedS="<<nusedCl<<
+               "NUsed="<<nusedf<<
+               "Findable="<<findable<<
+               "Like="<<like<<
+               "LikePrim="<<likePrim<<
+               "Likechi2C="<<likechi2C<<
+               "Likechi2TR="<<likechi2TR<<
+               "Likezf="<<likezf<<
+               "LikeF="<<seedquality2[registered]<<
+               "S0.="<<&cseed[0]<<
+               "S1.="<<&cseed[1]<<
+               "S2.="<<&cseed[2]<<
+               "S3.="<<&cseed[3]<<
+               "S4.="<<&cseed[4]<<
+               "S5.="<<&cseed[5]<<
+               "SB0.="<<&seedb[0]<<
+               "SB1.="<<&seedb[1]<<
+               "SB2.="<<&seedb[2]<<
+               "SB3.="<<&seedb[3]<<
+               "SB4.="<<&seedb[4]<<
+               "SB5.="<<&seedb[5]<<
+               "Label="<<label<<
+               "Freq="<<frequency<<
+               "sLayer="<<sLayer<<
+               "\n";
+           }
+           if (registered<kMaxSeed-1) {
+             registered++;
+             cseed = seed[registered];
+           }
+         }// end of loop over layer 1
+       }  // end of loop over layer 0 
+      }    // end of loop over layer 3     
+    }      // end of loop over seeding time bins 
+    //
+    // choos best
+    //
+    TMath::Sort(registered,seedquality2,sort,kTRUE);
+    Bool_t signedseed[kMaxSeed];
+    for (Int_t i=0;i<registered;i++){
+      signedseed[i]= kFALSE;
+    }
+    for (Int_t iter=0; iter<5; iter++){
+      for (Int_t iseed=0;iseed<registered;iseed++){      
+       Int_t index = sort[iseed];
+       if (signedseed[index]) continue;
+       Int_t labelsall[1000];
+       Int_t nlabelsall=0;
+       Int_t naccepted=0;;
+       Int_t sLayer = seedlayer[index];
+       Int_t ncl   = 0;
+       Int_t nused = 0;
+       Int_t nlayers =0;
+       Int_t findable   = 0;
+       for (Int_t jLayer=0;jLayer<6;jLayer++){
+         if (TMath::Abs(seed[index][jLayer].fYref[0]/xcl[jLayer])<0.15)
+           findable++;
+         if (seed[index][jLayer].IsOK()){
+           seed[index][jLayer].UpdateUsed();
+           ncl   +=seed[index][jLayer].fN2;
+           nused +=seed[index][jLayer].fNUsed;
+           nlayers++;
+           //cooking label
+           for (Int_t itime=0;itime<25;itime++){
+             if (seed[index][jLayer].fUsable[itime]){
+               naccepted++;
+               for (Int_t ilab=0;ilab<3;ilab++){
+                 Int_t tindex = seed[index][jLayer].fClusters[itime]->GetLabel(ilab);
+                 if (tindex>=0){
+                   labelsall[nlabelsall] = tindex;
+                   nlabelsall++;
+                 }
+               }
+             }
+           }
+         }
+       }
+       //
+       if (nused>30) continue;
+       //
+       if (iter==0){
+         if (nlayers<6) continue;
+         if (TMath::Log(0.000000001+seedquality2[index])<-5.) continue;   // gold
+       }
+       //
+       if (iter==1){
+         if (nlayers<findable) continue;
+         if (TMath::Log(0.000000001+seedquality2[index])<-4.) continue;  //
+       }
+       //
+       //
+       if (iter==2){
+         if (nlayers==findable || nlayers==6) continue;
+         if (TMath::Log(0.000000001+seedquality2[index])<-6.) continue;
+       }
+       //
+       if (iter==3){
+         if (TMath::Log(0.000000001+seedquality2[index])<-5.) continue;
+       }
+       //
+       if (iter==4){
+         if (TMath::Log(0.000000001+seedquality2[index])-nused/(nlayers-3.)<-15.) continue;
+       }
+       //
+       signedseed[index] = kTRUE;
+       //
+       Int_t labels[1000], outlab[1000];
+       Int_t nlab=0;
+       for (Int_t iLayer=0;iLayer<6;iLayer++){
+         if (seed[index][iLayer].IsOK()){
+           if (seed[index][iLayer].fLabels[0]>=0) {
+             labels[nlab] = seed[index][iLayer].fLabels[0];
+             nlab++;
+           }
+           if (seed[index][iLayer].fLabels[1]>=0) {
+             labels[nlab] = seed[index][iLayer].fLabels[1];
+             nlab++;
+           }    
+         }     
+       }
+       Freq(nlab,labels,outlab,kFALSE);
+       Int_t label  = outlab[0];
+       Int_t frequency  = outlab[1];
+       Freq(nlabelsall,labelsall,outlab,kFALSE);
+       Int_t label1 = outlab[0];
+       Int_t label2 = outlab[2];
+       Float_t fakeratio = (naccepted-outlab[1])/Float_t(naccepted);
+       Float_t ratio = Float_t(nused)/Float_t(ncl);
+       if (ratio<0.25){
+         for (Int_t jLayer=0;jLayer<6;jLayer++){
+           if ( seed[index][jLayer].IsOK()&&TMath::Abs(seed[index][jLayer].fYfit[1]-seed[index][jLayer].fYfit[1])<0.2 )
+             seed[index][jLayer].UseClusters();  //sign gold
+         }
+       }
+       //
+       Int_t eventNr = esd->GetEventNumber();
+       TTreeSRedirector& cstream = *fDebugStreamer;
+       //
+       // register seed
+       //
+       AliTRDtrack * track = RegisterSeed(seed[index],seedparams[index]);
+       AliTRDtrack dummy;
+       if (!track) track=&dummy;
+       else{
+         AliESDtrack esdtrack;
+         esdtrack.UpdateTrackParams(track, AliESDtrack::kTRDout);
+         esdtrack.SetLabel(label);
+         esd->AddTrack(&esdtrack);     
+         TTreeSRedirector& cstream = *fDebugStreamer;
+         if (AliTRDReconstructor::StreamLevel()>0)
+           cstream<<"Tracks"<<
+             "EventNr="<<eventNr<<
+             "ESD.="<<&esdtrack<<
+             "trd.="<<track<<
+             "trdback.="<<track<<
+             "\n";
+       }
+       if (AliTRDReconstructor::StreamLevel()>0)
+         cstream<<"Seeds2"<<
+         "Iter="<<iter<<
+         "Track.="<<track<<
+         "Like="<<seedquality[index]<<
+         "LikeF="<<seedquality2[index]<<
+         "S0.="<<&seed[index][0]<<
+         "S1.="<<&seed[index][1]<<
+         "S2.="<<&seed[index][2]<<
+         "S3.="<<&seed[index][3]<<
+         "S4.="<<&seed[index][4]<<
+         "S5.="<<&seed[index][5]<<
+         "Label="<<label<<
+         "Label1="<<label1<<
+         "Label2="<<label2<<
+         "FakeRatio="<<fakeratio<<
+         "Freq="<<frequency<<
+         "Ncl="<<ncl<< 
+         "Nlayers="<<nlayers<<
+         "Findable="<<findable<<
+         "NUsed="<<nused<<
+         "sLayer="<<sLayer<<
+         "EventNr="<<eventNr<<
+         "\n";
+      }
+    }
+  }        // end of loop over sectors
 
-  Int_t num_of_time_bins = fTrSec[0].GetNtimeBins(); 
-  Int_t nseed=fSeeds->GetEntriesFast();
+  delete [] pseed;
 
-  Int_t nSeedClusters;
-  for (Int_t i=0; i<nseed; i++) {
-    cerr<<"FindTracks: seed "<<i+1<<" out of "<<nseed<<endl;
+}
+          
+//_____________________________________________________________________________
+Int_t AliTRDtracker::ReadClusters(TObjArray *array, TTree *ClusterTree) const
+{
+  //
+  // Reads AliTRDclusters (option >= 0) or AliTRDrecPoints (option < 0) 
+  // from the file. The names of the cluster tree and branches 
+  // should match the ones used in AliTRDclusterizer::WriteClusters()
+  //
 
-    AliTRDtrack& t=*((AliTRDtrack*)fSeeds->UncheckedAt(i));
+  Int_t nsize = Int_t(ClusterTree->GetTotBytes()/(sizeof(AliTRDcluster))); 
+  TObjArray *clusterArray = new TObjArray(nsize+1000); 
+  
+  TBranch *branch=ClusterTree->GetBranch("TRDcluster");
+  if (!branch) {
+    Error("ReadClusters","Can't get the branch !");
+    return 1;
+  }
+  branch->SetAddress(&clusterArray); 
+  
+  Int_t nEntries = (Int_t) ClusterTree->GetEntries();
+  //  printf("found %d entries in %s.\n",nEntries,ClusterTree->GetName());
+  
+  // Loop through all entries in the tree
+  Int_t nbytes = 0;
+  AliTRDcluster *c = 0;
+  //  printf("\n");
+  for (Int_t iEntry = 0; iEntry < nEntries; iEntry++) {    
+    
+    // Import the tree
+    nbytes += ClusterTree->GetEvent(iEntry);  
+    
+    // Get the number of points in the detector
+    Int_t nCluster = clusterArray->GetEntriesFast();  
+//    printf("\r Read %d clusters from entry %d", nCluster, iEntry);
+    
+    // Loop through all TRD digits
+    for (Int_t iCluster = 0; iCluster < nCluster; iCluster++) { 
+      c = (AliTRDcluster*)clusterArray->UncheckedAt(iCluster);
+      AliTRDcluster *co = c;
+      array->AddLast(co);
+      //      delete clusterArray->RemoveAt(iCluster); 
+      clusterArray->RemoveAt(iCluster); 
+    }
+  }
+//   cout<<"Allocated"<<nsize<<"\tLoaded"<<array->GetEntriesFast()<<"\n";
 
-    nSeedClusters = t.GetNclusters();
-    Double_t alpha=t.GetAlpha();
+  delete clusterArray;
 
-    if (alpha > 2.*TMath::Pi()) alpha -= 2.*TMath::Pi();
-    if (alpha < 0.            ) alpha += 2.*TMath::Pi();
-    Int_t ns=Int_t(alpha/AliTRDgeometry::GetAlpha())%AliTRDgeometry::kNsect;
+  return 0;
 
-    if (FindProlongation(t,fTrSec,ns)) {
-      cerr<<"No of clusters in the track = "<<t.GetNclusters()<<endl; 
-      if (t.GetNclusters() >= Int_t(fMinClustersInTrack*num_of_time_bins)) {
-       Int_t label = GetTrackLabel(t);
-       t.SetLabel(label);
-       UseClusters(t);
+}
 
-        AliTRDtrack *pt = new AliTRDtrack(t);
-        fTracks->AddLast(pt); fNtracks++;     
+//_____________________________________________________________________________
+Bool_t AliTRDtracker::GetTrackPoint(Int_t index, AliTrackPoint& p) const
+{
+  //
+  // Get track space point with index i
+  // Origin: C.Cheshkov
+  //
 
-       cerr<<"found track "<<fNtracks<<endl;
-      }                         
-    }     
-    delete fSeeds->RemoveAt(i);  
-  }            
-}
+  AliTRDcluster *cl = (AliTRDcluster*)fClusters->UncheckedAt(index);
+  Int_t  idet = cl->GetDetector();
+  Int_t  isector = fGeom->GetSector(idet);
+  Int_t  ichamber= fGeom->GetChamber(idet);
+  Int_t  iplan   = fGeom->GetPlane(idet);
+  Double_t local[3];
+  local[0]=GetX(isector,iplan,cl->GetLocalTimeBin());
+  local[1]=cl->GetY();
+  local[2]=cl->GetZ();
+  Double_t global[3];
+  fGeom->RotateBack(idet,local,global);
+  p.SetXYZ(global[0],global[1],global[2]);
+  AliAlignObj::ELayerID iLayer = AliAlignObj::kTRD1;
+  switch (iplan) {
+  case 0:
+    iLayer = AliAlignObj::kTRD1;
+    break;
+  case 1:
+    iLayer = AliAlignObj::kTRD2;
+    break;
+  case 2:
+    iLayer = AliAlignObj::kTRD3;
+    break;
+  case 3:
+    iLayer = AliAlignObj::kTRD4;
+    break;
+  case 4:
+    iLayer = AliAlignObj::kTRD5;
+    break;
+  case 5:
+    iLayer = AliAlignObj::kTRD6;
+    break;
+  };
+  Int_t modId = isector*fGeom->Ncham()+ichamber;
+  UShort_t volid = AliAlignObj::LayerToVolUID(iLayer,modId);
+  p.SetVolumeID(volid);
+
+  return kTRUE;
 
-//__________________________________________________________________
-void AliTRDtracker::UseClusters(AliTRDtrack t) {
-  Int_t ncl=t.GetNclusters();
-  for (Int_t i=0; i<ncl; i++) {
-    Int_t index = t.GetClusterIndex(i);
-    AliTRDcluster *c=(AliTRDcluster*)fClusters->UncheckedAt(index);
-    c->Use();
-  }
 }
 
-//__________________________________________________________________
-Int_t AliTRDtracker::GetTrackLabel(AliTRDtrack t) {
+//_____________________________________________________________________________
+void AliTRDtracker::CookLabel(AliKalmanTrack* pt, Float_t wrong) const 
+{
+  //
+  // This cooks a label. Mmmmh, smells good...
+  //
 
   Int_t label=123456789, index, i, j;
-  Int_t ncl=t.GetNclusters();
-  const Int_t range = AliTRDgeometry::kNplan * fGeom->GetTimeMax();
-  Bool_t label_added;
+  Int_t ncl=pt->GetNumberOfClusters();
+  const Int_t kRange = fTrSec[0]->GetOuterTimeBin()+1;
 
-  //  Int_t s[range][2];
-  Int_t **s = new Int_t* [range];
-  for (i=0; i<range; i++) {
+  Bool_t labelAdded;
+
+  //  Int_t s[kRange][2];
+  Int_t **s = new Int_t* [kRange];
+  for (i=0; i<kRange; i++) {
     s[i] = new Int_t[2];
   }
-  for (i=0; i<range; i++) {
+  for (i=0; i<kRange; i++) {
     s[i][0]=-1;
     s[i][1]=0;
   }
 
   Int_t t0,t1,t2;
   for (i=0; i<ncl; i++) {
-    index=t.GetClusterIndex(i);
+    index=pt->GetClusterIndex(i);
     AliTRDcluster *c=(AliTRDcluster*)fClusters->UncheckedAt(index);
-    t0=c->GetTrackIndex(0);
-    t1=c->GetTrackIndex(1);
-    t2=c->GetTrackIndex(2);
+    t0=c->GetLabel(0);
+    t1=c->GetLabel(1);
+    t2=c->GetLabel(2);
   }
 
   for (i=0; i<ncl; i++) {
-    index=t.GetClusterIndex(i);
+    index=pt->GetClusterIndex(i);
     AliTRDcluster *c=(AliTRDcluster*)fClusters->UncheckedAt(index);
     for (Int_t k=0; k<3; k++) { 
-      label=c->GetTrackIndex(k);
-      label_added=kFALSE; j=0;
+      label=c->GetLabel(k);
+      labelAdded=kFALSE; j=0;
       if (label >= 0) {
-       while ( (!label_added) && ( j < range ) ) {
-         if (s[j][0]==label || s[j][1]==0) {
-           s[j][0]=label; 
-           s[j][1]=s[j][1]+1; 
-           label_added=kTRUE;
-         }
-         j++;
-       }
+        while ( (!labelAdded) && ( j < kRange ) ) {
+          if (s[j][0]==label || s[j][1]==0) {
+            s[j][0]=label; 
+            s[j][1]=s[j][1]+1; 
+            labelAdded=kTRUE;
+          }
+          j++;
+        }
       }
     }
   }
@@ -611,104 +2279,1211 @@ Int_t AliTRDtracker::GetTrackLabel(AliTRDtrack t) {
   Int_t max=0;
   label = -123456789;
 
-  for (i=0; i<range; i++) {
+  for (i=0; i<kRange; i++) {
     if (s[i][1]>max) {
       max=s[i][1]; label=s[i][0];
     }
   }
+
+  for (i=0; i<kRange; i++) {
+    delete []s[i];
+  }        
+
   delete []s;
-  if(max > ncl*fLabelFraction) return label;
-  else return -1;
+
+  if ((1.- Float_t(max)/ncl) > wrong) label=-label;   
+
+  pt->SetLabel(label); 
+
+}
+
+//_____________________________________________________________________________
+void AliTRDtracker::UseClusters(const AliKalmanTrack* t, Int_t from) const 
+{
+  //
+  // Use clusters, but don't abuse them!
+  //
+
+  const Float_t kmaxchi2 =18;
+  const Float_t kmincl   =10;
+  AliTRDtrack * track  = (AliTRDtrack*)t;
+  //
+  Int_t ncl=t->GetNumberOfClusters();
+  for (Int_t i=from; i<ncl; i++) {
+    Int_t index = t->GetClusterIndex(i);
+    AliTRDcluster *c=(AliTRDcluster*)fClusters->UncheckedAt(index);
+    //
+    Int_t iplane = fGeom->GetPlane(c->GetDetector());
+    if (track->fTracklets[iplane].GetChi2()>kmaxchi2) continue; 
+    if (track->fTracklets[iplane].GetN()<kmincl) continue; 
+    if (!(c->IsUsed())) c->Use();
+  }
+
+}
+
+//_____________________________________________________________________________
+Double_t AliTRDtracker::ExpectedSigmaY2(Double_t , Double_t , Double_t ) const
+{
+  //
+  // Parametrised "expected" error of the cluster reconstruction in Y 
+  //
+
+  Double_t s = 0.08 * 0.08;    
+  return s;
+
 }
 
-//___________________________________________________________________
+//_____________________________________________________________________________
+Double_t AliTRDtracker::ExpectedSigmaZ2(Double_t , Double_t ) const
+{
+  //
+  // Parametrised "expected" error of the cluster reconstruction in Z 
+  //
 
-Int_t AliTRDtracker::WriteTracks(const Char_t *filename) {
+  Double_t s = 9 * 9 /12.;  
+  return s;
 
-  TDirectory *savedir=gDirectory;   
+}                  
 
-  TFile *out=TFile::Open(filename,"RECREATE");
+//_____________________________________________________________________________
+Double_t AliTRDtracker::GetX(Int_t sector, Int_t plane, Int_t localTB) const 
+{
+  //
+  // Returns radial position which corresponds to time bin <localTB>
+  // in tracking sector <sector> and plane <plane>
+  //
 
-  TTree tracktree("TreeT","Tree with TRD tracks");
+  Int_t index = fTrSec[sector]->CookTimeBinIndex(plane, localTB); 
+  Int_t pl = fTrSec[sector]->GetLayerNumber(index);
+  return fTrSec[sector]->GetLayer(pl)->GetX();
 
-  AliTRDtrack *iotrack=0;
-  tracktree.Branch("tracks","AliTRDtrack",&iotrack,32000,0);  
+}
 
-  Int_t ntracks=fTracks->GetEntriesFast();
+//_____________________________________________________________________________
+AliTRDtracker::AliTRDpropagationLayer
+             ::AliTRDpropagationLayer(Double_t x, Double_t dx, Double_t rho
+                                    , Double_t radLength, Int_t tbIndex, Int_t plane)
+{ 
+  //
+  // AliTRDpropagationLayer constructor
+  //
 
-  for (Int_t i=0; i<ntracks; i++) {
-    AliTRDtrack *pt=(AliTRDtrack*)fTracks->UncheckedAt(i);
-    iotrack=pt;
-    tracktree.Fill(); 
-    cerr<<"WriteTracks: put track "<<i<<" in the tree"<<endl;
+  fN = 0; fX = x; fdX = dx; fRho = rho; fX0 = radLength;
+  fClusters = NULL; fIndex = NULL; fTimeBinIndex = tbIndex;
+  fPlane = plane;
+
+  for(Int_t i=0; i < (Int_t) kZones; i++) {
+    fZc[i]=0; fZmax[i] = 0;
   }
 
-  tracktree.Write(); 
-  out->Close(); 
+  fYmax = 0;
 
-  savedir->cd();  
+  if(fTimeBinIndex >= 0) { 
+    fClusters = new AliTRDcluster*[kMaxClusterPerTimeBin];
+    fIndex = new UInt_t[kMaxClusterPerTimeBin];
+  }
+
+  for (Int_t i=0;i<5;i++) fIsHole[i] = kFALSE;
+  fHole = kFALSE;
+  fHoleZc = 0;
+  fHoleZmax = 0;
+  fHoleYc = 0;
+  fHoleYmax = 0;
+  fHoleRho = 0;
+  fHoleX0 = 0;
 
-  cerr<<"WriteTracks: done"<<endl;
-  return 0;
 }
 
 //_____________________________________________________________________________
-void AliTRDtracker::ReadClusters(TObjArray *array, const Char_t *filename, 
-Int_t option) 
+void AliTRDtracker::AliTRDpropagationLayer
+                  ::SetHole(Double_t Zmax, Double_t Ymax, Double_t rho
+                          , Double_t radLength, Double_t Yc, Double_t Zc) 
 {
   //
-  // Reads AliTRDclusters (option >= 0) or AliTRDrecPoints (option < 0) 
-  // from the file. The names of the cluster tree and branches 
-  // should match the ones used in AliTRDclusterizer::WriteClusters()
+  // Sets hole in the layer 
   //
 
-  TDirectory *savedir=gDirectory; 
+  fHole = kTRUE;
+  fHoleZc = Zc;
+  fHoleZmax = Zmax;
+  fHoleYc = Yc;
+  fHoleYmax = Ymax;
+  fHoleRho = rho;
+  fHoleX0 = radLength;
+
+}
+
+//_____________________________________________________________________________
+AliTRDtracker::AliTRDtrackingSector
+             ::AliTRDtrackingSector(AliTRDgeometry* geo, Int_t gs)
+{
+  //
+  // AliTRDtrackingSector Constructor
+  //
+
+  AliTRDpadPlane *padPlane = 0;
+
+  fGeom = geo;
+  fGeomSector = gs;
+  fN = 0;
+  //
+  // get holes description from geometry
+  Bool_t holes[AliTRDgeometry::kNcham];
+  //printf("sector\t%d\t",gs);
+  for (Int_t icham=0; icham<AliTRDgeometry::kNcham;icham++){
+    holes[icham] = fGeom->IsHole(0,icham,gs);
+    //printf("%d",holes[icham]);
+  } 
+  //printf("\n");
+  
+  for(UInt_t i=0; i < kMaxTimeBinIndex; i++) fTimeBinIndex[i] = -1;
+
+
+  AliTRDpropagationLayer* ppl;
+
+  Double_t x, dx, rho, radLength;
+  //  Int_t    steps;
+
+  // add layers for each of the planes
+  Double_t dxAmp = (Double_t) fGeom->CamHght();   // Amplification region
+  //Double_t dxDrift = (Double_t) fGeom->CdrHght(); // Drift region  
+
+  Int_t    tbIndex;
+  const Int_t  kNchambers = AliTRDgeometry::Ncham();
+  Double_t  ymax = 0;
+  Double_t ymaxsensitive=0;
+  Double_t *zc = new Double_t[kNchambers];
+  Double_t *zmax = new Double_t[kNchambers];
+  Double_t *zmaxsensitive = new Double_t[kNchambers];  
+
+  AliTRDCommonParam* commonParam = AliTRDCommonParam::Instance();
+  if (!commonParam)
+  {
+    printf("<AliTRDtracker::AliTRDtrackingSector::AliTRDtrackingSector> ");
+    printf("Could not get common params\n");
+    return;
+  }
+    
+  for(Int_t plane = 0; plane < AliTRDgeometry::Nplan(); plane++) {
+
+    ymax          = fGeom->GetChamberWidth(plane)/2.;
+    // Modidified for new pad plane class, 22.04.05 (C.B.)
+    padPlane = commonParam->GetPadPlane(plane,0);
+    ymaxsensitive = (padPlane->GetColSize(1)*padPlane->GetNcols()-4)/2.;    
+    for(Int_t ch = 0; ch < kNchambers; ch++) {
+      zmax[ch] = fGeom->GetChamberLength(plane,ch)/2;
+      //
+      // Modidified for new pad plane class, 22.04.05 (C.B.)
+      Float_t pad = padPlane->GetRowSize(1);
+      Float_t row0 = commonParam->GetRow0(plane,ch,0);
+      Int_t nPads = commonParam->GetRowMax(plane,ch,0);
+      zmaxsensitive[ch] = Float_t(nPads)*pad/2.;      
+      zc[ch] = -(pad * nPads)/2 + row0;
+    }
+
+    dx  = AliTRDcalibDB::Instance()->GetVdrift(0,0,0)
+        / AliTRDcalibDB::Instance()->GetSamplingFrequency();
+    rho = 0.00295 * 0.85; radLength = 11.0;  
+
+    Double_t x0 = (Double_t) AliTRDgeometry::GetTime0(plane);
+    //Double_t xbottom = x0 - dxDrift;
+    //Double_t xtop = x0 + dxAmp;
+    //
+    Int_t nTimeBins =  AliTRDcalibDB::Instance()->GetNumberOfTimeBins();    
+    for (Int_t iTime = 0; iTime<nTimeBins; iTime++){
+      Double_t xlayer  = iTime*dx - dxAmp;
+      //if (xlayer<0) xlayer=dxAmp/2.;
+      x = x0 - xlayer;
+      //      
+      tbIndex = CookTimeBinIndex(plane, iTime);
+      ppl = new AliTRDpropagationLayer(x,dx,rho,radLength,tbIndex, plane);
+      ppl->SetYmax(ymax,ymaxsensitive);
+      ppl->SetZ(zc, zmax, zmaxsensitive);
+      ppl->SetHoles(holes);
+      InsertLayer(ppl);      
+    }
+  }    
+
+  MapTimeBinLayers();
+  delete [] zc;
+  delete [] zmax;
+  delete [] zmaxsensitive;
+
+}
+
+//_____________________________________________________________________________
+Int_t  AliTRDtracker::AliTRDtrackingSector
+                    ::CookTimeBinIndex(Int_t plane, Int_t localTB) const
+{
+  //
+  // depending on the digitization parameters calculates "global"
+  // time bin index for timebin <localTB> in plane <plane>
+  //
+  //
+
+  Int_t tbPerPlane = AliTRDcalibDB::Instance()->GetNumberOfTimeBins();
+  Int_t gtb = (plane+1) * tbPerPlane - localTB -1;
+  if (localTB<0) return -1;
+  if (gtb<0)     return -1;
+
+  return gtb;
+
+}
+
+//_____________________________________________________________________________
+void AliTRDtracker::AliTRDtrackingSector
+                  ::MapTimeBinLayers() 
+{
+  //
+  // For all sensitive time bins sets corresponding layer index
+  // in the array fTimeBins 
+  //
+
+  Int_t index;
+
+  for(Int_t i = 0; i < fN; i++) {
+    index = fLayers[i]->GetTimeBinIndex();
+    
+    //    printf("gtb %d -> pl %d -> x %f \n", index, i, fLayers[i]->GetX());
+
+    if(index < 0) continue;
+    if(index >= (Int_t) kMaxTimeBinIndex) {
+      printf("*** AliTRDtracker::MapTimeBinLayers: \n");
+      printf("    index %d exceeds allowed maximum of %d!\n",
+             index, kMaxTimeBinIndex-1);
+      continue;
+    }
+    fTimeBinIndex[index] = i;
+  }
+
+}
+
+//_____________________________________________________________________________
+Int_t AliTRDtracker::AliTRDtrackingSector
+                   ::GetLayerNumber(Double_t x) const
+{
+  // 
+  // Returns the number of time bin which in radial position is closest to <x>
+  //
+
+  if(x >= fLayers[fN-1]->GetX()) return fN-1; 
+  if(x <= fLayers[0]->GetX()) return 0; 
+
+  Int_t b=0, e=fN-1, m=(b+e)/2;
+  for (; b<e; m=(b+e)/2) {
+    if (x > fLayers[m]->GetX()) b=m+1;
+    else e=m;
+  }
+  if(TMath::Abs(x - fLayers[m]->GetX()) > 
+     TMath::Abs(x - fLayers[m+1]->GetX())) return m+1;
+
+  else return m;
+
+}
+
+//_____________________________________________________________________________
+Int_t AliTRDtracker::AliTRDtrackingSector
+                   ::GetInnerTimeBin() const 
+{
+  // 
+  // Returns number of the innermost SENSITIVE propagation layer
+  //
+
+  return GetLayerNumber(0);
+
+}
+
+//_____________________________________________________________________________
+Int_t AliTRDtracker::AliTRDtrackingSector
+                   ::GetOuterTimeBin() const 
+{
+  // 
+  // Returns number of the outermost SENSITIVE time bin
+  //
+
+  return GetLayerNumber(GetNumberOfTimeBins() - 1);
+
+}
+
+//_____________________________________________________________________________
+Int_t AliTRDtracker::AliTRDtrackingSector
+                   ::GetNumberOfTimeBins() const 
+{
+  // 
+  // Returns number of SENSITIVE time bins
+  //
+
+  Int_t tb, layer;
+  for(tb = kMaxTimeBinIndex-1; tb >=0; tb--) {
+    layer = GetLayerNumber(tb);
+    if(layer>=0) break;
+  }
+
+  return tb+1;
+
+}
+
+//_____________________________________________________________________________
+void AliTRDtracker::AliTRDtrackingSector
+                  ::InsertLayer(AliTRDpropagationLayer* pl)
+{ 
+  //
+  // Insert layer <pl> in fLayers array.
+  // Layers are sorted according to X coordinate.
+  //
+
+  if ( fN == ((Int_t) kMaxLayersPerSector)) {
+    printf("AliTRDtrackingSector::InsertLayer(): Too many layers !\n");
+    return;
+  }
+  if (fN==0) {fLayers[fN++] = pl; return;}
+  Int_t i=Find(pl->GetX());
+
+  memmove(fLayers+i+1 ,fLayers+i,(fN-i)*sizeof(AliTRDpropagationLayer*));
+  fLayers[i]=pl; fN++;
+
+}              
+
+//_____________________________________________________________________________
+Int_t AliTRDtracker::AliTRDtrackingSector
+                   ::Find(Double_t x) const 
+{
+  //
+  // Returns index of the propagation layer nearest to X 
+  //
+
+  if (x <= fLayers[0]->GetX()) return 0;
+  if (x > fLayers[fN-1]->GetX()) return fN;
+  Int_t b=0, e=fN-1, m=(b+e)/2;
+  for (; b<e; m=(b+e)/2) {
+    if (x > fLayers[m]->GetX()) b=m+1;
+    else e=m;
+  }
+
+  return m;
+
+}             
+
+//_____________________________________________________________________________
+void AliTRDtracker::AliTRDpropagationLayer
+                  ::SetZ(Double_t* center, Double_t *w, Double_t *wsensitive )
+{
+  //
+  // set centers and the width of sectors
+  //
+
+  for (Int_t icham=0;icham< AliTRDgeometry::kNcham;icham++){
+    fZc[icham] = center[icham];  
+    fZmax[icham] = w[icham];
+    fZmaxSensitive[icham] = wsensitive[icham];
+    // printf("chamber\t%d\tzc\t%f\tzmax\t%f\tzsens\t%f\n",icham,fZc[icham],fZmax[icham],fZmaxSensitive[icham]);
+  }  
+
+}
+
+//_____________________________________________________________________________
+void AliTRDtracker::AliTRDpropagationLayer::SetHoles(Bool_t *holes)
+{
+  //
+  // set centers and the width of sectors
+  //
+
+  fHole = kFALSE;
+  for (Int_t icham=0;icham< AliTRDgeometry::kNcham;icham++){
+    fIsHole[icham] = holes[icham]; 
+    if (holes[icham]) fHole = kTRUE;
+  }  
+
+}
+
+//_____________________________________________________________________________
+void AliTRDtracker::AliTRDpropagationLayer
+                  ::InsertCluster(AliTRDcluster* c, UInt_t index) 
+{
+  //
+  // Insert cluster in cluster array.
+  // Clusters are sorted according to Y coordinate.  
+  //
+
+  if(fTimeBinIndex < 0) { 
+    printf("*** attempt to insert cluster into non-sensitive time bin!\n");
+    return;
+  }
+
+  if (fN== (Int_t) kMaxClusterPerTimeBin) {
+    printf("AliTRDpropagationLayer::InsertCluster(): Too many clusters !\n"); 
+    return;
+  }
+  if (fN==0) {fIndex[0]=index; fClusters[fN++]=c; return;}
+  Int_t i=Find(c->GetY());
+  memmove(fClusters+i+1 ,fClusters+i,(fN-i)*sizeof(AliTRDcluster*));
+  memmove(fIndex   +i+1 ,fIndex   +i,(fN-i)*sizeof(UInt_t)); 
+  fIndex[i]=index; fClusters[i]=c; fN++;
+
+}  
+
+//_____________________________________________________________________________
+Int_t AliTRDtracker::AliTRDpropagationLayer::Find(Float_t y) const 
+{
+  //
+  // Returns index of the cluster nearest in Y    
+  //
+
+  if (fN<=0) return 0;
+  if (y <= fClusters[0]->GetY()) return 0;
+  if (y > fClusters[fN-1]->GetY()) return fN;
+  Int_t b=0, e=fN-1, m=(b+e)/2;
+  for (; b<e; m=(b+e)/2) {
+    if (y > fClusters[m]->GetY()) b=m+1;
+    else e=m;
+  }
+
+  return m;
+
+}    
+
+//_____________________________________________________________________________
+Int_t AliTRDtracker::AliTRDpropagationLayer
+                   ::FindNearestCluster(Float_t y, Float_t z, Float_t maxroad
+                                      , Float_t maxroadz) const 
+{
+  //
+  // Returns index of the cluster nearest to the given y,z
+  //
+
+  Int_t index = -1;
+  Int_t maxn = fN;
+  Float_t mindist = maxroad;                   
+  //
+  for (Int_t i=Find(y-maxroad); i<maxn; i++) {
+    AliTRDcluster* c=(AliTRDcluster*)(fClusters[i]);
+    Float_t ycl = c->GetY();
+    //
+    if (ycl > y+maxroad) break;
+    if (TMath::Abs(c->GetZ()-z) > maxroadz) continue;      
+    if (TMath::Abs(ycl-y)<mindist){
+      mindist = TMath::Abs(ycl-y);
+      index = fIndex[i];
+    }        
+  }                                            
+
+  return index;
+
+}             
+
+//_____________________________________________________________________________
+Double_t AliTRDtracker::GetTiltFactor(const AliTRDcluster* c) 
+{
+  //
+  // Returns correction factor for tilted pads geometry 
+  //
+
+  Int_t det = c->GetDetector();    
+  Int_t plane = fGeom->GetPlane(det);
+  AliTRDpadPlane *padPlane = AliTRDCommonParam::Instance()->GetPadPlane(plane,0);
+  Double_t h01 = TMath::Tan(-TMath::Pi() / 180.0 * padPlane->GetTiltingAngle());
+
+  if(fNoTilt) h01 = 0;
+
+  return h01;
+
+}
+
+//_____________________________________________________________________________
+void AliTRDtracker::CookdEdxTimBin(AliTRDtrack& TRDtrack)
+{
+  //
+  // *** ADDED TO GET MORE INFORMATION FOR TRD PID  ---- PS
+  // This is setting fdEdxPlane and fTimBinPlane
+  // Sums up the charge in each plane for track TRDtrack and also get the 
+  // Time bin for Max. Cluster
+  // Prashant Shukla (shukla@physi.uni-heidelberg.de)
+  //
+
+  Double_t  clscharge[AliESDtrack::kNPlane][AliESDtrack::kNSlice];
+  Double_t  maxclscharge[AliESDtrack::kNPlane];
+  Int_t     nCluster[AliESDtrack::kNPlane][AliESDtrack::kNSlice];
+  Int_t     timebin[AliESDtrack::kNPlane];
+
+  //Initialization of cluster charge per plane.  
+  for (Int_t iPlane = 0; iPlane < AliESDtrack::kNPlane; iPlane++) {
+    for (Int_t iSlice = 0; iSlice < AliESDtrack::kNSlice; iSlice++) {
+      clscharge[iPlane][iSlice] = 0.0;
+      nCluster[iPlane][iSlice] = 0;
+    }
+  }
+
+  //Initialization of cluster charge per plane.  
+  for (Int_t iPlane = 0; iPlane < AliESDtrack::kNPlane; iPlane++) {
+    timebin[iPlane] = -1;
+    maxclscharge[iPlane] = 0.0;
+  }
+
+  // Loop through all clusters associated to track TRDtrack
+  Int_t nClus = TRDtrack.GetNumberOfClusters();  // from Kalmantrack
+  for (Int_t iClus = 0; iClus < nClus; iClus++) {
+    Double_t charge = TRDtrack.GetClusterdQdl(iClus);
+    Int_t index = TRDtrack.GetClusterIndex(iClus);
+    AliTRDcluster *pTRDcluster = (AliTRDcluster *) GetCluster(index); 
+    if (!pTRDcluster) continue;
+    Int_t tb = pTRDcluster->GetLocalTimeBin();
+    if (!tb) continue;
+    Int_t detector = pTRDcluster->GetDetector();
+    Int_t iPlane   = fGeom->GetPlane(detector);
+    Int_t iSlice = tb*AliESDtrack::kNSlice/AliTRDtrack::kNtimeBins;
+    clscharge[iPlane][iSlice] = clscharge[iPlane][iSlice]+charge;
+    if(charge > maxclscharge[iPlane]) {
+      maxclscharge[iPlane] = charge;
+      timebin[iPlane] = tb;
+    }
+    nCluster[iPlane][iSlice]++;
+  } // end of loop over cluster
+
+  // Setting the fdEdxPlane and fTimBinPlane variabales 
+  Double_t totalCharge = 0;
 
-  TFile *file = TFile::Open(filename);
-  if (!file->IsOpen()) {printf("Can't open file %s !\n",filename); return;} 
+  for (Int_t iPlane = 0; iPlane < AliESDtrack::kNPlane; iPlane++) {
+    for (Int_t iSlice = 0; iSlice < AliESDtrack::kNSlice; iSlice++) {
+      if (nCluster[iPlane][iSlice]) clscharge[iPlane][iSlice] /= nCluster[iPlane][iSlice];
+      TRDtrack.SetPIDsignals(clscharge[iPlane][iSlice], iPlane, iSlice);
+      totalCharge= totalCharge+clscharge[iPlane][iSlice];
+    }
+    TRDtrack.SetPIDTimBin(timebin[iPlane], iPlane);     
+  }
+
+  //  Int_t i;
+  //  Int_t nc=TRDtrack.GetNumberOfClusters(); 
+  //  Float_t dedx=0;
+  //  for (i=0; i<nc; i++) dedx += TRDtrack.GetClusterdQdl(i);
+  //  dedx /= nc;
+  //  for (Int_t iPlane = 0; iPlane < kNPlane; iPlane++) {
+  //    TRDtrack.SetPIDsignals(dedx, iPlane);
+  //    TRDtrack.SetPIDTimBin(timbin[iPlane], iPlane);
+  //  }
 
-  TTree *tree = (TTree*)file->Get("ClusterTree");
-  Int_t nentr = (Int_t) tree->GetEntries();
-  printf("found %d entries in %s.\n",nentr,tree->GetName());
+}
 
-  TBranch *branch;
-  TObjArray *ioArray = new TObjArray(400);
+//_____________________________________________________________________________
+Int_t AliTRDtracker::FindClusters(Int_t sector, Int_t t0, Int_t t1
+                                , AliTRDtrack * track
+                                , Int_t *clusters,AliTRDtracklet&tracklet)
+{
+  //
+  //
+  // Try to find nearest clusters to the track in timebins from t0 to t1 
+  //  
+  //
+  //  
+  // correction coeficients   - depends on TRD parameters  - to be changed according it
+  //
 
-  if( option < 0 ) {
-    branch = tree->GetBranch("RecPoints");
+  Double_t x[100],yt[100],zt[100];
+  Double_t xmean=0;   //reference x
+  Double_t dz[10][100],dy[10][100];
+  Float_t zmean[100], nmean[100];
+  Int_t    clfound=0;
+  Int_t    indexes[10][100];    // indexes of the clusters in the road
+  AliTRDcluster *cl[10][100];   // pointers to the clusters in the road
+  Int_t    best[10][100];       // index of best matching cluster 
+  //
+  //
 
-    for (Int_t i=0; i<nentr; i++) {
-      branch->SetAddress(&ioArray);
-      tree->GetEvent(i);
-      Int_t npoints = ioArray->GetEntriesFast();
-      printf("Read %d rec. points from entry %d \n", npoints, i);
+  for (Int_t it=0;it<100; it++){
+    x[it]=0;
+    yt[it]=0;
+    zt[it]=0;
+    clusters[it]=-2;
+    zmean[it]=0;
+    nmean[it]=0;
+    //
+    for (Int_t ih=0;ih<10;ih++){
+      indexes[ih][it]=-2;              //reset indexes1
+      cl[ih][it]=0;
+      dz[ih][it]=-100;
+      dy[ih][it]=-100;
+      best[ih][it]=0;
+    }
+  }  
+  //
+  Double_t x0 = track->GetX();
+  Double_t sigmaz = TMath::Sqrt(TMath::Abs(track->GetSigmaZ2()));
+  Int_t nall=0;
+  Int_t nfound=0;
+  Double_t h01 =0;
+  Int_t plane =-1;
+  Int_t detector =-1;
+  Float_t padlength=0;
+  AliTRDtrack track2(*track);
+  Float_t snpy = track->GetSnp();
+  Float_t tany = TMath::Sqrt(snpy*snpy/(1.-snpy*snpy)); 
+  if (snpy<0) tany*=-1;
+  //
+  Double_t sy2=ExpectedSigmaY2(x0,track->GetTgl(),track->GetPt());
+  Double_t sz2=ExpectedSigmaZ2(x0,track->GetTgl());
+  Double_t road = 15.*sqrt(track->GetSigmaY2() + sy2);
+  if (road>6.) road=6.;
 
-      for(Int_t j=0; j<npoints; j++) {
-       AliTRDrecPoint *p=(AliTRDrecPoint*)ioArray->UncheckedAt(j);
-       array->AddLast(p);
-       ioArray->RemoveAt(j);
+  //
+  for (Int_t it=0;it<t1-t0;it++){
+    Double_t maxChi2[2]={fgkMaxChi2,fgkMaxChi2};      
+    AliTRDpropagationLayer& timeBin=*(fTrSec[sector]->GetLayer(it+t0));
+    if (timeBin==0) continue;  // no indexes1
+    Int_t maxn = timeBin;
+    x[it] = timeBin.GetX();
+    track2.PropagateTo(x[it]);
+    yt[it] = track2.GetY();
+    zt[it] = track2.GetZ();
+    
+    Double_t  y=yt[it],z=zt[it];
+    Double_t chi2 =1000000;
+    nall++;
+    //
+    // find 2 nearest cluster at given time bin
+    // 
+    // 
+    for (Int_t i=timeBin.Find(y-road); i<maxn; i++) {
+      AliTRDcluster* c=(AliTRDcluster*)(timeBin[i]);
+      h01 = GetTiltFactor(c);
+      if (plane<0){
+       Int_t det = c->GetDetector();
+       plane = fGeom->GetPlane(det);
+       padlength = TMath::Sqrt(c->GetSigmaZ2()*12.);
+      }
+      //      if (c->GetLocalTimeBin()==0) continue;
+      if (c->GetY() > y+road) break;
+      if((c->GetZ()-z)*(c->GetZ()-z) > 12. * sz2) continue;      
+
+      Double_t dist = TMath::Abs(c->GetZ()-z);
+      if (dist> (0.5*padlength+6.*sigmaz)) continue;   // 6 sigma boundary cut
+      Double_t cost = 0;
+      //
+      if (dist> (0.5*padlength-sigmaz)){   //  sigma boundary cost function
+       cost =  (dist-0.5*padlength)/(2.*sigmaz);
+       if (cost>-1) cost= (cost+1.)*(cost+1.);
+       else cost=0;
+      }      
+      //      Int_t label = TMath::Abs(track->GetLabel());
+      //      if (c->GetLabel(0)!=label && c->GetLabel(1)!=label&&c->GetLabel(2)!=label) continue;
+      chi2=track2.GetPredictedChi2(c,h01)+cost;
+      //
+      clfound++;      
+      if (chi2 > maxChi2[1]) continue;
+      detector = c->GetDetector();
+      
+      for (Int_t ih=2;ih<9; ih++){  //store the clusters in the road
+       if (cl[ih][it]==0){
+         cl[ih][it] = c;
+         indexes[ih][it] =timeBin.GetIndex(i);   // index - 9 - reserved for outliers
+         break;
+       }
       }
+      //
+      if (chi2 <maxChi2[0]){
+       maxChi2[1]     = maxChi2[0];
+       maxChi2[0]     = chi2;
+       indexes[1][it] = indexes[0][it];
+       cl[1][it]      = cl[0][it];
+       indexes[0][it] = timeBin.GetIndex(i);
+       cl[0][it]      = c;
+       continue;
+      }
+      maxChi2[1]=chi2;
+      cl[1][it] = c;
+      indexes[1][it] =timeBin.GetIndex(i); 
+    }         
+    if (cl[0][it]){
+      nfound++;
+      xmean += x[it];
     }
   }
-  else {
-    branch = tree->GetBranch("Clusters");
-
-    for (Int_t i=0; i<nentr; i++) {
-      branch->SetAddress(&ioArray);
-      tree->GetEvent(i);
-      Int_t npoints = ioArray->GetEntriesFast();
-      printf("Read %d clusters from entry %d \n", npoints, i);
-
-      for(Int_t j=0; j<npoints; j++) {
-       AliTRDcluster *c=(AliTRDcluster*)ioArray->UncheckedAt(j);
-       array->AddLast(c);
-       ioArray->RemoveAt(j);
+  //
+  if (nfound<4) return 0;  
+  xmean /=Float_t(nfound);     // middle x
+  track2.PropagateTo(xmean);   // propagate track to the center
+  //
+  // choose one of the variants
+  //
+  Int_t changes[10];
+  Float_t sumz      = 0;
+  Float_t sum       = 0;
+  Double_t sumdy    = 0;
+  Double_t sumdy2   = 0;
+  Double_t sumx     = 0;
+  Double_t sumxy    = 0;
+  Double_t sumx2    = 0;
+  Double_t mpads    = 0;
+  //
+  Int_t   ngood[10];
+  Int_t   nbad[10];
+  //
+  Double_t meanz[10];
+  Double_t moffset[10];    // mean offset
+  Double_t mean[10];       // mean value
+  Double_t angle[10];      // angle
+  //
+  Double_t smoffset[10];   // sigma of mean offset
+  Double_t smean[10];      // sigma of mean value
+  Double_t sangle[10];     // sigma of angle
+  Double_t smeanangle[10]; // correlation
+  //
+  Double_t sigmas[10];     
+  Double_t tchi2s[10];      // chi2s for tracklet
+
+  for (Int_t it=0;it<10;it++) {
+
+    ngood[it] = 0;
+    nbad[it] = 0;
+  //
+    meanz[it] = 0;
+    moffset[it] = 0;    // mean offset
+    mean[it] = 0;       // mean value
+    angle[it] = 0;      // angle
+  //
+    smoffset[it] = 1e10;   // sigma of mean offset
+    smean[it] = 1e10;      // sigma of mean value
+    sangle[it] = 1e10;     // sigma of angle
+    smeanangle[it] = 0; // correlation
+  //
+    sigmas[it] = 1e10;     
+    tchi2s[it] = 1e10;      // chi2s for tracklet
+
+  }
+
+  //
+  // calculate zmean
+  //
+  for (Int_t it=0;it<t1-t0;it++){
+    if (!cl[0][it]) continue;
+    for (Int_t dt=-3;dt<=3;dt++){
+      if (it+dt<0) continue;
+      if (it+dt>t1-t0) continue;
+      if (!cl[0][it+dt]) continue;
+      zmean[it]+=cl[0][it+dt]->GetZ();
+      nmean[it]+=1.;
+    }
+    zmean[it]/=nmean[it]; 
+  }
+  //
+  for (Int_t it=0; it<t1-t0;it++){
+    best[0][it]=0;
+    for (Int_t ih=0;ih<10;ih++){
+      dz[ih][it]=-100;
+      dy[ih][it]=-100;
+      if (!cl[ih][it]) continue;
+      Double_t  xcluster = cl[ih][it]->GetX();
+      Double_t ytrack,ztrack;
+      track2.GetProlongation(xcluster, ytrack, ztrack );
+      dz[ih][it]  = cl[ih][it]->GetZ()- ztrack;                               // calculate distance from track  in z
+      dy[ih][it]  = cl[ih][it]->GetY()+ dz[ih][it]*h01  -ytrack;     //                                in y
+    }
+    // minimize changes
+    if (!cl[0][it]) continue;
+    if (TMath::Abs(cl[0][it]->GetZ()-zmean[it])> padlength*0.8 &&cl[1][it])
+      if (TMath::Abs(cl[1][it]->GetZ()-zmean[it])< padlength*0.5){
+       best[0][it]=1;
+      }
+  }
+  //
+  // iterative choosing of "best path"
+  //
+  //
+  Int_t label = TMath::Abs(track->GetLabel());
+  Int_t bestiter=0;
+  //
+  for (Int_t iter=0;iter<9;iter++){
+    //
+    changes[iter]= 0;
+    sumz      = 0; sum=0; sumdy=0;sumdy2=0;sumx=0;sumx2=0;sumxy=0;mpads=0; ngood[iter]=0; nbad[iter]=0; 
+    // linear fit
+    for (Int_t it=0;it<t1-t0;it++){
+      if (!cl[best[iter][it]][it]) continue;
+      //calculates pad-row changes
+      Double_t zbefore= cl[best[iter][it]][it]->GetZ();
+      Double_t zafter = cl[best[iter][it]][it]->GetZ();
+      for (Int_t itd = it-1; itd>=0;itd--) {
+       if (cl[best[iter][itd]][itd]) {
+         zbefore= cl[best[iter][itd]][itd]->GetZ();
+         break;
+       }
+      }
+      for (Int_t itd = it+1; itd<t1-t0;itd++) {
+       if (cl[best[iter][itd]][itd]) {
+         zafter= cl[best[iter][itd]][itd]->GetZ();
+         break;
+       }
+      }
+      if (TMath::Abs(cl[best[iter][it]][it]->GetZ()-zbefore)>0.1&&TMath::Abs(cl[best[iter][it]][it]->GetZ()-zafter)>0.1) changes[iter]++;
+      //
+      Double_t dx = x[it]-xmean;  // distance to reference x
+      sumz += cl[best[iter][it]][it]->GetZ();      
+      sum++;
+      sumdy += dy[best[iter][it]][it];
+      sumdy2+= dy[best[iter][it]][it]*dy[best[iter][it]][it];
+      sumx  += dx;
+      sumx2 += dx*dx;
+      sumxy  += dx*dy[best[iter][it]][it];
+      mpads += cl[best[iter][it]][it]->GetNPads();
+      if (cl[best[iter][it]][it]->GetLabel(0)==label || cl[best[iter][it]][it]->GetLabel(1)==label||cl[best[iter][it]][it]->GetLabel(2)==label){
+       ngood[iter]++;
+      }
+      else{
+       nbad[iter]++;
+      }
+    }
+    //
+    // calculates line parameters
+    //
+    Double_t det  = sum*sumx2-sumx*sumx;
+    angle[iter]   = (sum*sumxy-sumx*sumdy)/det;
+    mean[iter]    = (sumx2*sumdy-sumx*sumxy)/det;
+    meanz[iter]   = sumz/sum;    
+    moffset[iter] = sumdy/sum;
+    mpads        /= sum;                         // mean number of pads
+    //
+    //
+    Double_t  sigma2 = 0;   // normalized residuals - for line fit
+    Double_t  sigma1 = 0;   // normalized residuals - constant fit
+    //
+    for (Int_t it=0;it<t1-t0;it++){
+      if (!cl[best[iter][it]][it]) continue;
+      Double_t dx = x[it]-xmean;
+      Double_t ytr = mean[iter]+angle[iter]*dx;
+      sigma2 += (dy[best[iter][it]][it]-ytr)*(dy[best[iter][it]][it]-ytr);
+      sigma1 +=  (dy[best[iter][it]][it]-moffset[iter])*(dy[best[iter][it]][it]-moffset[iter]);
+      sum++;
+    }
+    sigma2      /=(sum-2);                    // normalized residuals
+    sigma1      /=(sum-1);                    // normalized residuals
+    //
+    smean[iter]       = sigma2*(sumx2/det);   // estimated error2 of mean
+    sangle[iter]      = sigma2*(sum/det);     // estimated error2 of angle
+    smeanangle[iter]  = sigma2*(-sumx/det);   // correlation
+    //
+    //
+    sigmas[iter]  = TMath::Sqrt(sigma1);      //
+    smoffset[iter]= (sigma1/sum)+0.01*0.01;             // sigma of mean offset + unisochronity sigma 
+    //
+    // iterative choosing of "better path"
+    //
+    for (Int_t it=0;it<t1-t0;it++){
+      if (!cl[best[iter][it]][it]) continue;
+      //
+      Double_t sigmatr2 = smoffset[iter]+0.5*tany*tany;             //add unisochronity + angular effect contribution
+      Double_t sweight  = 1./sigmatr2+1./track->GetSigmaY2();
+      Double_t weighty  = (moffset[iter]/sigmatr2)/sweight;         // weighted mean
+      Double_t sigmacl  = TMath::Sqrt(sigma1*sigma1+track->GetSigmaY2());   //
+      Double_t mindist=100000; 
+      Int_t ihbest=0;
+      for (Int_t ih=0;ih<10;ih++){
+       if (!cl[ih][it]) break;
+       Double_t dist2 = (dy[ih][it]-weighty)/sigmacl;
+       dist2*=dist2;    //chi2 distance
+       if (dist2<mindist){
+         mindist = dist2;
+         ihbest =ih;
+       }
       }
+      best[iter+1][it]=ihbest;
+    }
+    //
+    //  update best hypothesy if better chi2 according tracklet position and angle
+    //
+    Double_t sy2 = smean[iter]  + track->GetSigmaY2();
+    Double_t sa2 = sangle[iter] + track->fCee;
+    Double_t say = track->fCey;
+    //    Double_t chi20 = mean[bestiter]*mean[bestiter]/sy2+angle[bestiter]*angle[bestiter]/sa2;
+    // Double_t chi21 = mean[iter]*mean[iter]/sy2+angle[iter]*angle[iter]/sa2;
+
+    Double_t detchi    = sy2*sa2-say*say;
+    Double_t invers[3] = {sa2/detchi, sy2/detchi, -say/detchi};   //inverse value of covariance matrix  
+    
+    Double_t chi20 = mean[bestiter]*mean[bestiter]*invers[0]+angle[bestiter]*angle[bestiter]*invers[1]+
+      2.*mean[bestiter]*angle[bestiter]*invers[2];
+    Double_t chi21 = mean[iter]*mean[iter]*invers[0]+angle[iter]*angle[iter]*invers[1]+
+      2*mean[iter]*angle[iter]*invers[2];
+    tchi2s[iter] =chi21;
+    //
+    if (changes[iter]<=changes[bestiter] && chi21<chi20) {
+      bestiter =iter;      
     }
   }
+  //
+  //set clusters 
+  //
+  Double_t sigma2 = sigmas[0];   // choose as sigma  from 0 iteration
+  Short_t maxpos    = -1;
+  Float_t maxcharge =  0;
+  Short_t maxpos4    = -1;
+  Float_t maxcharge4 =  0;
+  Short_t maxpos5    = -1;
+  Float_t maxcharge5 =  0;
+
+  //if (tchi2s[bestiter]>25.) sigma2*=tchi2s[bestiter]/25.;
+  //if (tchi2s[bestiter]>25.) sigma2=1000.;  // dont'accept
+
+  Double_t exB = AliTRDcalibDB::Instance()->GetOmegaTau(AliTRDcalibDB::Instance()->GetVdrift(0,0,0));
+  Double_t expectederr = sigma2*sigma2+0.01*0.01;
+  if (mpads>3.5) expectederr  +=   (mpads-3.5)*0.04;
+  if (changes[bestiter]>1) expectederr+=   changes[bestiter]*0.01; 
+  expectederr+=(0.03*(tany-exB)*(tany-exB))*15;
+  //  if (tchi2s[bestiter]>18.) expectederr*= tchi2s[bestiter]/18.;
+  //expectederr+=10000;
+  for (Int_t it=0;it<t1-t0;it++){
+    if (!cl[best[bestiter][it]][it]) continue;
+    cl[best[bestiter][it]][it]->SetSigmaY2(expectederr);  // set cluster error
+    if (!cl[best[bestiter][it]][it]->IsUsed()){
+      cl[best[bestiter][it]][it]->SetY( cl[best[bestiter][it]][it]->GetY()); 
+      //      cl[best[bestiter][it]][it]->Use();
+    }
+    //
+    //  time bins with maximal charge
+    if (TMath::Abs(cl[best[bestiter][it]][it]->GetQ())> maxcharge){
+      maxcharge = TMath::Abs(cl[best[bestiter][it]][it]->GetQ());
+      maxpos = cl[best[bestiter][it]][it]->GetLocalTimeBin();
+    }
+    
+    if (TMath::Abs(cl[best[bestiter][it]][it]->GetQ())> maxcharge4){
+      if (cl[best[bestiter][it]][it]->GetLocalTimeBin()>=4){
+       maxcharge4 = TMath::Abs(cl[best[bestiter][it]][it]->GetQ());
+       maxpos4 = cl[best[bestiter][it]][it]->GetLocalTimeBin();
+      }
+    }
+    if (TMath::Abs(cl[best[bestiter][it]][it]->GetQ())> maxcharge5){
+      if (cl[best[bestiter][it]][it]->GetLocalTimeBin()>=5){
+       maxcharge5 = TMath::Abs(cl[best[bestiter][it]][it]->GetQ());
+       maxpos5 = cl[best[bestiter][it]][it]->GetLocalTimeBin();
+      }
+    }
+    //
+    //  time bins with maximal charge
+    if (TMath::Abs(cl[best[bestiter][it]][it]->GetQ())> maxcharge){
+      maxcharge = TMath::Abs(cl[best[bestiter][it]][it]->GetQ());
+      maxpos = cl[best[bestiter][it]][it]->GetLocalTimeBin();
+    }
+    
+    if (TMath::Abs(cl[best[bestiter][it]][it]->GetQ())> maxcharge4){
+      if (cl[best[bestiter][it]][it]->GetLocalTimeBin()>=4){
+       maxcharge4 = TMath::Abs(cl[best[bestiter][it]][it]->GetQ());
+       maxpos4 = cl[best[bestiter][it]][it]->GetLocalTimeBin();
+      }
+    }
+    if (TMath::Abs(cl[best[bestiter][it]][it]->GetQ())> maxcharge5){
+      if (cl[best[bestiter][it]][it]->GetLocalTimeBin()>=5){
+       maxcharge5 = TMath::Abs(cl[best[bestiter][it]][it]->GetQ());
+       maxpos5 = cl[best[bestiter][it]][it]->GetLocalTimeBin();
+      }
+    }
+    clusters[it+t0] = indexes[best[bestiter][it]][it];    
+    //if (cl[best[bestiter][it]][it]->GetLocalTimeBin()>4 && cl[best[bestiter][it]][it]->GetLocalTimeBin()<18) clusters[it+t0] = indexes[best[bestiter][it]][it];    //Test
+  } 
+  //
+  // set tracklet parameters
+  //
+  Double_t trackleterr2 = smoffset[bestiter]+0.01*0.01;
+  if (mpads>3.5) trackleterr2  +=   (mpads-3.5)*0.04;
+  trackleterr2+=   changes[bestiter]*0.01;
+  trackleterr2*=   TMath::Max(14.-nfound,1.);
+  trackleterr2+=   0.2*(tany-exB)*(tany-exB); 
+  //
+  tracklet.Set(xmean, track2.GetY()+moffset[bestiter], meanz[bestiter], track2.GetAlpha(), trackleterr2);  //set tracklet parameters
+  tracklet.SetTilt(h01);
+  tracklet.SetP0(mean[bestiter]);
+  tracklet.SetP1(angle[bestiter]);
+  tracklet.SetN(nfound);
+  tracklet.SetNCross(changes[bestiter]);
+  tracklet.SetPlane(plane);
+  tracklet.SetSigma2(expectederr);
+  tracklet.SetChi2(tchi2s[bestiter]);
+  tracklet.SetMaxPos(maxpos,maxpos4,maxpos5);
+  track->fTracklets[plane] = tracklet;
+  track->fNWrong+=nbad[0];
+  //
+  // Debuging part
+  //
+  TClonesArray array0("AliTRDcluster");
+  TClonesArray array1("AliTRDcluster");
+  array0.ExpandCreateFast(t1-t0+1);
+  array1.ExpandCreateFast(t1-t0+1);
+  TTreeSRedirector& cstream = *fDebugStreamer;
+  AliTRDcluster dummy;
+  Double_t dy0[100];
+  Double_t dyb[100]; 
+
+  for (Int_t it=0;it<t1-t0;it++){
+    dy0[it] = dy[0][it];
+    dyb[it] = dy[best[bestiter][it]][it];
+    if(cl[0][it]) {
+      new(array0[it]) AliTRDcluster(*cl[0][it]);
+    }
+    else{
+      new(array0[it]) AliTRDcluster(dummy);
+    }
+    if(cl[best[bestiter][it]][it]) {
+      new(array1[it]) AliTRDcluster(*cl[best[bestiter][it]][it]);
+    }
+    else{
+      new(array1[it]) AliTRDcluster(dummy);
+    }
+  }
+  TGraph graph0(t1-t0,x,dy0);
+  TGraph graph1(t1-t0,x,dyb);
+  TGraph graphy(t1-t0,x,yt);
+  TGraph graphz(t1-t0,x,zt);
+  //
+  //
+  if (AliTRDReconstructor::StreamLevel()>0)
+  cstream<<"tracklet"<<
+    "track.="<<track<<                                       // track parameters
+    "tany="<<tany<<                                          // tangent of the local track angle 
+    "xmean="<<xmean<<                                        // xmean - reference x of tracklet  
+    "tilt="<<h01<<                                           // tilt angle
+    "nall="<<nall<<                                          // number of foundable clusters 
+    "nfound="<<nfound<<                                      // number of found clusters
+    "clfound="<<clfound<<                                    // total number of found clusters in road 
+    "mpads="<<mpads<<                                        // mean number of pads per cluster
+    "plane="<<plane<<                                        // plane number 
+    "detector="<<detector<<                                  // detector number
+    "road="<<road<<                                          // the width of the used road
+    "graph0.="<<&graph0<<                                    // x - y = dy for closest cluster
+    "graph1.="<<&graph1<<                                    // x - y = dy for second closest cluster    
+    "graphy.="<<&graphy<<                                    // y position of the track
+    "graphz.="<<&graphz<<                                    // z position of the track
+    //    "fCl.="<<&array0<<                                       // closest cluster
+    //"fCl2.="<<&array1<<                                      // second closest cluster
+    "maxpos="<<maxpos<<                                      // maximal charge postion
+    "maxcharge="<<maxcharge<<                                // maximal charge 
+    "maxpos4="<<maxpos4<<                                    // maximal charge postion - after bin 4
+    "maxcharge4="<<maxcharge4<<                              // maximal charge         - after bin 4
+    "maxpos5="<<maxpos5<<                                    // maximal charge postion - after bin 5
+    "maxcharge5="<<maxcharge5<<                              // maximal charge         - after bin 5
+    //
+    "bestiter="<<bestiter<<                                  // best iteration number 
+    "tracklet.="<<&tracklet<<                                // corrspond to the best iteration
+    "tchi20="<<tchi2s[0]<<                                   // chi2 of cluster in the 0 iteration
+    "tchi2b="<<tchi2s[bestiter]<<                            // chi2 of cluster in the best  iteration
+    "sigmas0="<<sigmas[0]<<                                  // residuals sigma 
+    "sigmasb="<<sigmas[bestiter]<<                           // residulas sigma
+    //
+    "ngood0="<<ngood[0]<<                                    // number of good clusters in 0 iteration
+    "nbad0="<<nbad[0]<<                                      // number of bad clusters in 0 iteration
+    "ngoodb="<<ngood[bestiter]<<                             //                        in  best iteration    
+    "nbadb="<<nbad[bestiter]<<                               //                        in  best iteration
+    //
+    "changes0="<<changes[0]<<                                // changes of pardrows in iteration number 0 
+    "changesb="<<changes[bestiter]<<                         // changes of pardrows in best iteration
+    //
+    "moffset0="<<moffset[0]<<                                // offset fixing angle in iter=0
+    "smoffset0="<<smoffset[0]<<                              // sigma of offset fixing angle in iter=0
+    "moffsetb="<<moffset[bestiter]<<                         // offset fixing angle in iter=best
+    "smoffsetb="<<smoffset[bestiter]<<                       // sigma of offset fixing angle in iter=best
+    //
+    "mean0="<<mean[0]<<                                      // mean dy in iter=0;
+    "smean0="<<smean[0]<<                                    // sigma of mean dy in iter=0
+    "meanb="<<mean[bestiter]<<                               // mean dy in iter=best
+    "smeanb="<<smean[bestiter]<<                             // sigma of mean dy in iter=best
+    //
+    "angle0="<<angle[0]<<                                    // angle deviation in the iteration number 0 
+    "sangle0="<<sangle[0]<<                                  // sigma of angular deviation in iteration number 0
+    "angleb="<<angle[bestiter]<<                             // angle deviation in the best iteration   
+    "sangleb="<<sangle[bestiter]<<                           // sigma of angle deviation in the best iteration   
+    //
+    "expectederr="<<expectederr<<                            // expected error of cluster position
+    "\n";
+  //
+  //
+  return nfound;
+
+}
 
-  file->Close();                   
-  savedir->cd(); 
+//_____________________________________________________________________________
+Int_t AliTRDtracker::Freq(Int_t n, const Int_t *inlist
+                        , Int_t *outlist, Bool_t down)
+{    
+  //
+  //  Sort eleements according occurancy 
+  //  The size of output array has is 2*n 
+  //
+
+  Int_t * sindexS = new Int_t[n];     // temp array for sorting
+  Int_t * sindexF = new Int_t[2*n];   
+  for (Int_t i=0;i<n;i++) sindexF[i]=0;
+  //
+  TMath::Sort(n,inlist, sindexS, down);  
+  Int_t last      = inlist[sindexS[0]];
+  Int_t val       = last;
+  sindexF[0]      = 1;
+  sindexF[0+n]    = last;
+  Int_t countPos  = 0;
+  //
+  //  find frequency
+  for(Int_t i=1;i<n; i++){
+    val = inlist[sindexS[i]];
+    if (last == val)   sindexF[countPos]++;
+    else{      
+      countPos++;
+      sindexF[countPos+n] = val;
+      sindexF[countPos]++;
+      last =val;
+    }
+  }
+  if (last==val) countPos++;
+  // sort according frequency
+  TMath::Sort(countPos, sindexF, sindexS, kTRUE);
+  for (Int_t i=0;i<countPos;i++){
+    outlist[2*i  ] = sindexF[sindexS[i]+n];
+    outlist[2*i+1] = sindexF[sindexS[i]];
+  }
+  delete [] sindexS;
+  delete [] sindexF;
   
+  return countPos;
+
 }
 
+//_____________________________________________________________________________
+AliTRDtrack *AliTRDtracker::RegisterSeed(AliTRDseed * seeds, Double_t * params)
+{
+  //
+  // Register a seed
+  //
+  Double_t alpha=AliTRDgeometry::GetAlpha();
+  Double_t shift=AliTRDgeometry::GetAlpha()/2.;
+  Double_t c[15];
+  c[0] = 0.2;
+  c[1] = 0  ; c[2] = 2;
+  c[3] = 0  ; c[4] = 0; c[5] = 0.02;
+  c[6] = 0  ; c[7] = 0; c[8] = 0;      c[9] = 0.1;
+  c[10] = 0  ; c[11] = 0; c[12] = 0;   c[13] = 0.0; c[14] = params[5]*params[5]*0.01;
+  //
+  Int_t index =0;
+  AliTRDcluster *cl =0;
+  for (Int_t ilayer=0;ilayer<6;ilayer++){
+    if (seeds[ilayer].IsOK()){
+      for (Int_t itime=22;itime>0;itime--){
+       if (seeds[ilayer].fIndexes[itime]>0){
+         index = seeds[ilayer].fIndexes[itime];
+         cl = seeds[ilayer].fClusters[itime];
+         break;
+       }
+      }
+    }
+    if (index>0) break;
+  }
+  if (cl==0) return 0;
+  AliTRDtrack * track  = new AliTRDtrack(cl,index,&params[1],c, params[0],params[6]*alpha+shift);
+  track->PropagateTo(params[0]-5.);
+  track->ResetCovariance(1);
+  //
+  Int_t rc=FollowBackProlongation(*track);
+  if (rc<30) {
+    delete track;
+    track =0;
+  }else{
+    track->CookdEdx();
+    CookdEdxTimBin(*track);
+    CookLabel(track, 0.9);
+  }
+
+  return track;
+
+}