[u/mrichter/AliRoot.git] / EMCAL / AliEMCALReconstructor.cxx

/**************************************************************************
 * Copyright(c) 1998-1999, ALICE Experiment at CERN, All rights reserved. *
 *                                                                        *
 * Author: The ALICE Off-line Project.                                    *
 * Contributors are mentioned in the code where appropriate.              *
 *                                                                        *
 * Permission to use, copy, modify and distribute this software and its   *
 * documentation strictly for non-commercial purposes is hereby granted   *
 * without fee, provided that the above copyright notice appears in all   *
 * copies and that both the copyright notice and this permission notice   *
 * appear in the supporting documentation. The authors make no claims     *
 * about the suitability of this software for any purpose. It is          *
 * provided "as is" without express or implied warranty.                  *
 **************************************************************************/

/* $Id$ */

//_________________________________________________________________________
//*--
//*-- Yves Schutz (SUBATECH) 
// Reconstruction class. Redesigned from the old AliReconstructionner class and 
// derived from STEER/AliReconstructor. 
// 
// --- ROOT system ---

// --- Standard library ---

// --- AliRoot header files ---
#include "AliEMCALReconstructor.h"

#include "AliRun.h"
#include "AliESDEvent.h"
#include "AliESDtrack.h"
#include "AliRunLoader.h"
#include "AliEMCALLoader.h"
#include "AliEMCALRawUtils.h"
#include "AliEMCALClusterizerv1.h"
#include "AliEMCALRecPoint.h"
#include "AliEMCALPID.h"
#include "AliEMCALTrigger.h"
#include "AliRawReader.h"

ClassImp(AliEMCALReconstructor)

//____________________________________________________________________________
AliEMCALReconstructor::AliEMCALReconstructor() 
  : fDebug(kFALSE) 
{
  // ctor
} 

//____________________________________________________________________________
AliEMCALReconstructor::AliEMCALReconstructor(const AliEMCALReconstructor & rec)
  : AliReconstructor(rec),
    fDebug(rec.fDebug)
{
  //copy ctor
}

//____________________________________________________________________________
AliEMCALReconstructor::~AliEMCALReconstructor()
{
  // dtor
} 

//____________________________________________________________________________
void AliEMCALReconstructor::Reconstruct(AliRunLoader* runLoader) const 
{
  // method called by AliReconstruction; 
  // Only the clusterization is performed,; the rest of the reconstruction is done in FillESD because the track
  // segment maker needs access to the AliESD object to retrieve the tracks reconstructed by 
  // the global tracking.
 
  TString headerFile(runLoader->GetFileName()) ; 
  TString branchName(runLoader->GetEventFolder()->GetName() ) ;  
  
  AliEMCALClusterizerv1 clu(headerFile, branchName);
  AliEMCALLoader *emcalLoader = dynamic_cast<AliEMCALLoader*>(runLoader->GetDetectorLoader("EMCAL"));    

  Int_t nEvents   = runLoader->GetNumberOfEvents();
  runLoader->LoadDigits("EMCAL");
  for (Int_t ievent = 0; ievent < nEvents; ievent++) {
    runLoader->GetEvent(ievent);
    if ( Debug() ) 
      clu.ExecuteTask("deb all") ; 
    else 
      clu.ExecuteTask("pseudo") ;  
  }   
  // Unload the Digits and RecPoints
  emcalLoader->UnloadDigits() ; 
  emcalLoader->UnloadRecPoints() ; 
}

//____________________________________________________________________________
void AliEMCALReconstructor::Reconstruct(AliRunLoader* runLoader, AliRawReader* rawReader) const 

{
  // Reconstruction loop for Raw Data processing
  //
  // Only the clusterization is performed
  // Track-cluster matching is done in FillESD because the track
  // segment maker needs access to the AliESD object to retrieve 
  // the tracks reconstructed by the global tracking.
  
  TString headerFile(runLoader->GetFileName()) ; 
  TString branchName(runLoader->GetEventFolder()->GetName()) ;  

  static AliEMCALRawUtils rawUtils;
  AliEMCALClusterizerv1 clu(headerFile, branchName);
  AliEMCALLoader *emcalLoader = dynamic_cast<AliEMCALLoader*>(runLoader->GetDetectorLoader("EMCAL"));    
 
  Int_t iEvent = 0;
  rawReader->Reset() ; 
  while (rawReader->NextEvent()) {  
    runLoader->GetEvent(iEvent++);

    rawUtils.Raw2Digits(rawReader);

    if ( Debug() ) 
      clu.ExecuteTask("deb pseudo all") ; 
    else 
      clu.ExecuteTask("pseudo") ;  
    // Unload the RecPoints
    emcalLoader->UnloadRecPoints() ; 
  }
}

//____________________________________________________________________________
void AliEMCALReconstructor::FillESD(AliRunLoader* runLoader, AliESDEvent* esd) const
{
  // Called by AliReconstruct after Reconstruct() and global tracking and vertexing 
  const double timeScale = 1.e+11; // transition constant from sec to 0.01 ns 

  Int_t eventNumber = runLoader->GetEventNumber() ;

  // Creates AliESDCaloCluster from AliEMCALRecPoints 
  AliEMCALLoader *emcalLoader = dynamic_cast<AliEMCALLoader*>(runLoader->GetDetectorLoader("EMCAL"));
  runLoader->LoadRecPoints("EMCAL");
  runLoader->GetEvent(eventNumber);
  TObjArray *clusters = emcalLoader->RecPoints();
  Int_t nClusters = clusters->GetEntries(), nClustersNew=0;
  AliDebug(1,Form("Event %d: %d clusters",eventNumber,nClusters));
  //  Int_t nRP=0, nPC=0; // in input
  esd->SetFirstEMCALCluster(esd->GetNumberOfCaloClusters()); // Put after Phos clusters 

  //######################################################
  //#########Calculate trigger and set trigger info###########
  //######################################################
 
  AliEMCALTrigger tr ;
  //   tr.SetPatchSize(1);//create 4x4 patches
  tr.Trigger();
  
  Float_t maxAmp2x2  = tr.Get2x2MaxAmplitude();
  Float_t maxAmpnxn  = tr.GetnxnMaxAmplitude();
  Float_t ampOutOfPatch2x2  = tr.Get2x2AmpOutOfPatch() ;
  Float_t ampOutOfPatchnxn  = tr.GetnxnAmpOutOfPatch() ;

  AliEMCALGeometry * geom = 0;
  if (runLoader->GetAliRun() && runLoader->GetAliRun()->GetDetector("EMCAL"))
    geom = dynamic_cast<AliEMCAL*>(runLoader->GetAliRun()->GetDetector("EMCAL"))->GetGeometry();
  if (geom == 0) 
    geom = AliEMCALGeometry::GetInstance(AliEMCALGeometry::GetDefaulGeometryName());

  Int_t iSM2x2      = tr.Get2x2SuperModule();
  Int_t iSMnxn      = tr.GetnxnSuperModule();
  Int_t iCellPhi2x2 = tr.Get2x2CellPhi();
  Int_t iCellPhinxn = tr.GetnxnCellPhi();
  Int_t iCellEta2x2 = tr.Get2x2CellEta();
  Int_t iCellEtanxn = tr.GetnxnCellEta();

  AliDebug(2, Form("Trigger 2x2 max amp %f, out amp %f, SM %d, iphi %d ieta %d",  maxAmp2x2, ampOutOfPatch2x2, iSM2x2,iCellPhi2x2, iCellEta2x2));
  AliDebug(2, Form("Trigger 4x4 max amp %f , out amp %f, SM %d, iphi %d, ieta %d",  maxAmpnxn, ampOutOfPatchnxn, iSMnxn,iCellPhinxn, iCellEtanxn));

  TVector3    pos2x2(-1,-1,-1);
  TVector3    posnxn(-1,-1,-1);

  Int_t iAbsId2x2 = geom->GetAbsCellIdFromCellIndexes( iSM2x2, iCellPhi2x2, iCellEta2x2) ;
  Int_t iAbsIdnxn = geom->GetAbsCellIdFromCellIndexes( iSMnxn, iCellPhinxn, iCellEtanxn) ;
  geom->GetGlobal(iAbsId2x2, pos2x2);
  geom->GetGlobal(iAbsIdnxn, posnxn);
  
  TArrayF triggerPosition(6);
  triggerPosition[0] = pos2x2(0) ;   
  triggerPosition[1] = pos2x2(1) ;   
  triggerPosition[2] = pos2x2(2) ;  
  triggerPosition[3] = posnxn(0) ;   
  triggerPosition[4] = posnxn(1) ;   
  triggerPosition[5] = posnxn(2) ;  

  TArrayF triggerAmplitudes(4);
  triggerAmplitudes[0] = maxAmp2x2 ;   
  triggerAmplitudes[1] = ampOutOfPatch2x2 ;    
  triggerAmplitudes[2] = maxAmpnxn ;   
  triggerAmplitudes[3] = ampOutOfPatchnxn ;   

  esd->AddEMCALTriggerPosition(triggerPosition);
  esd->AddEMCALTriggerAmplitudes(triggerAmplitudes);
  
  //######################################################
  //#######################TRACK MATCHING###############
  //######################################################
  //Fill list of integers, each one is index of track to which the cluster belongs.

  // step 1 - initialize array of matched track indexes
  Int_t *matchedTrack = new Int_t[nClusters];
  for (Int_t iclus = 0; iclus < nClusters; iclus++)
    matchedTrack[iclus] = -1;  // neg. index --> no matched track
  
  // step 2, change the flag for all matched clusters found in tracks
  Int_t iemcalMatch = -1;
  Int_t endtpc = esd->GetNumberOfTracks();
  for (Int_t itrack = 0; itrack < endtpc; itrack++) {
    AliESDtrack * track = esd->GetTrack(itrack) ; // retrieve track
    iemcalMatch = track->GetEMCALcluster();
    if(iemcalMatch >= 0) matchedTrack[iemcalMatch] = itrack;
  } 
  
  //########################################
  //##############Fill CaloClusters#############
  //########################################


  for (Int_t iClust = 0 ; iClust < nClusters ; iClust++) {
    const AliEMCALRecPoint * clust = emcalLoader->RecPoint(iClust);
    //if(clust->GetClusterType()== AliESDCaloCluster::kClusterv1) nRP++; else nPC++;
    if (Debug()) clust->Print();
    // Get information from EMCAL reconstruction points
    Float_t xyz[3];
    TVector3 gpos;
    clust->GetGlobalPosition(gpos);
    for (Int_t ixyz=0; ixyz<3; ixyz++) 
      xyz[ixyz] = gpos[ixyz];
    
    Int_t digitMult = clust->GetMultiplicity();
    Short_t *amplList = new Short_t[digitMult];
    Short_t *timeList = new Short_t[digitMult];
    Short_t *digiList = new Short_t[digitMult];
    Float_t *amplFloat = clust->GetEnergiesList();
    Float_t *timeFloat = clust->GetTimeList();
    Int_t   *digitInts = clust->GetAbsId();
    Float_t elipAxis[2];
    clust->GetElipsAxis(elipAxis);
    
    // Convert Float_t* and Int_t* to Short_t* to save memory
    // Problem : we should recalculate a cluster characteristics when discard digit(s)
    Int_t newdigitMult = 0; 
    for (Int_t iDigit=0; iDigit<digitMult; iDigit++) {
      if (amplFloat[iDigit] > 0) {
	amplList[newdigitMult] = (UShort_t)(amplFloat[iDigit]*500);
        // Time in units of 0.01 ns = 10 ps
        if(timeFloat[iDigit] < 65536./timeScale) 
	  timeList[newdigitMult] = (UShort_t)(timeFloat[iDigit]*timeScale);
        else
          timeList[newdigitMult] = 65535;
	digiList[newdigitMult] = (UShort_t)(digitInts[iDigit]);
        newdigitMult++;
      }
      else if (clust->GetClusterType() != AliESDCaloCluster::kPseudoCluster)
        Warning("FillESD()","Negative or 0 digit amplitude in cluster");
    }
    
    if(newdigitMult > 0) { // accept cluster if it has some digit
      nClustersNew++;
      if(newdigitMult != digitMult) { // some digits were deleted
        Short_t *amplListNew = new Short_t[newdigitMult];
        Short_t *timeListNew = new Short_t[newdigitMult];
        Short_t *digiListNew = new Short_t[newdigitMult];
        for (Int_t iDigit=0; iDigit<newdigitMult; iDigit++) {
          amplListNew[iDigit] = amplList[iDigit];
          timeListNew[iDigit] = timeList[iDigit];
          digiListNew[iDigit] = digiList[iDigit];
        }
	
        delete [] amplList;
        delete [] timeList;
        delete [] digiList;
	
        amplList = amplListNew;
        timeList = timeListNew;
        digiList = digiListNew;
      }
      
      //Primaries
      Int_t  parentMult  = 0;
      Int_t *parentInts =  clust->GetParents(parentMult);
      Short_t *parentList = new Short_t[parentMult];
      for (Int_t ipr=0; ipr<parentMult; ipr++) 
	parentList[ipr] = (Short_t)(parentInts[ipr]);	 
      
      
      // fills the ESDCaloCluster
      AliESDCaloCluster * ec = new AliESDCaloCluster() ; 
      ec->SetEMCAL(kTRUE);
      ec->SetClusterType(clust->GetClusterType());
      ec->SetPosition(xyz);
      ec->SetE(clust->GetEnergy());
      TArrayS arrayAmpList(newdigitMult,amplList);
      TArrayS arrayTimeList(newdigitMult,timeList);
      TArrayS arrayIndexList(newdigitMult,digiList);
      ec->AddDigitAmplitude(arrayAmpList);
      ec->AddDigitTime(arrayTimeList);
      ec->AddDigitIndex(arrayIndexList);
    
      if(clust->GetClusterType()== AliESDCaloCluster::kClusterv1){

        ec->SetClusterDisp(clust->GetDispersion());
        ec->SetClusterChi2(-1); //not yet implemented
        ec->SetM02(elipAxis[0]*elipAxis[0]) ;
        ec->SetM20(elipAxis[1]*elipAxis[1]) ;
        ec->SetM11(-1) ;        //not yet implemented
	
       TArrayS arrayTrackMatched(1);// Only one track, temporal solution.
       arrayTrackMatched[0]= (Short_t)(matchedTrack[iClust]);
       ec->AddTracksMatched(arrayTrackMatched);
	
       TArrayS arrayParents(parentMult,parentList);
       ec->AddLabels(arrayParents);
      } 
      
      // add the cluster to the esd object
      esd->AddCaloCluster(ec);
      delete ec;
      
    } else { // no new ESD cluster
      delete [] amplList;
      delete [] timeList;
      delete [] digiList;
    }
  } // cycle on clusters
  esd->SetNumberOfEMCALClusters(nClustersNew);
  //if(nClustersNew != nClusters) 
  //printf(" ##### nClusters %i -> new %i ##### \n", nClusters, nClustersNew );
  
  //Fill ESDCaloCluster with PID weights
  AliEMCALPID *pid = new AliEMCALPID;
  //pid->SetPrintInfo(kTRUE);
  pid->SetReconstructor(kTRUE);
  pid->RunPID(esd);
}
Commit	Line	Data
f6019cda	1	/**************************************************************************
	2	* Copyright(c) 1998-1999, ALICE Experiment at CERN, All rights reserved. *
	3	* *
	4	* Author: The ALICE Off-line Project. *
	5	* Contributors are mentioned in the code where appropriate. *
	6	* *
	7	* Permission to use, copy, modify and distribute this software and its *
	8	* documentation strictly for non-commercial purposes is hereby granted *
	9	* without fee, provided that the above copyright notice appears in all *
	10	* copies and that both the copyright notice and this permission notice *
	11	* appear in the supporting documentation. The authors make no claims *
	12	* about the suitability of this software for any purpose. It is *
	13	* provided "as is" without express or implied warranty. *
	14	**************************************************************************/
	15
	16	/* $Id$ */
	17
	18	//_________________________________________________________________________
	19	//*--
	20	//*-- Yves Schutz (SUBATECH)
	21	// Reconstruction class. Redesigned from the old AliReconstructionner class and
	22	// derived from STEER/AliReconstructor.
	23	//
	24	// --- ROOT system ---
	25
	26	// --- Standard library ---
	27
	28	// --- AliRoot header files ---
f6019cda	29	#include "AliEMCALReconstructor.h"
5dee926e	30
69db97f5	31	#include "AliRun.h"
af885e0f	32	#include "AliESDEvent.h"
6a0cf740	33	#include "AliESDtrack.h"
5dee926e	34	#include "AliRunLoader.h"
5dee926e	35	#include "AliEMCALLoader.h"
98e9578e	36	#include "AliEMCALRawUtils.h"
f6019cda	37	#include "AliEMCALClusterizerv1.h"
5dee926e	38	#include "AliEMCALRecPoint.h"
dc293ae9	39	#include "AliEMCALPID.h"
0964c2e9	40	#include "AliEMCALTrigger.h"
1d59832c	41	#include "AliRawReader.h"
1d59832c	42
f6019cda	43	ClassImp(AliEMCALReconstructor)
	44
	45	//____________________________________________________________________________
18a21c7c	46	AliEMCALReconstructor::AliEMCALReconstructor()
18a21c7c	47	: fDebug(kFALSE)
f6019cda	48	{
f6019cda	49	// ctor
f6019cda	50	}
f6019cda	51
0a4cb131	52	//____________________________________________________________________________
18a21c7c	53	AliEMCALReconstructor::AliEMCALReconstructor(const AliEMCALReconstructor & rec)
	54	: AliReconstructor(rec),
	55	fDebug(rec.fDebug)
0a4cb131	56	{
0a4cb131	57	//copy ctor
0a4cb131	58	}
f6019cda	59
	60	//____________________________________________________________________________
	61	AliEMCALReconstructor::~AliEMCALReconstructor()
	62	{
	63	// dtor
	64	}
	65
	66	//____________________________________________________________________________
	67	void AliEMCALReconstructor::Reconstruct(AliRunLoader* runLoader) const
	68	{
	69	// method called by AliReconstruction;
	70	// Only the clusterization is performed,; the rest of the reconstruction is done in FillESD because the track
	71	// segment maker needs access to the AliESD object to retrieve the tracks reconstructed by
	72	// the global tracking.
	73
	74	TString headerFile(runLoader->GetFileName()) ;
b4975670	75	TString branchName(runLoader->GetEventFolder()->GetName() ) ;
f6019cda	76
f6019cda	77	AliEMCALClusterizerv1 clu(headerFile, branchName);
98e9578e	78	AliEMCALLoader emcalLoader = dynamic_cast<AliEMCALLoader>(runLoader->GetDetectorLoader("EMCAL"));
	79
	80	Int_t nEvents = runLoader->GetNumberOfEvents();
	81	runLoader->LoadDigits("EMCAL");
	82	for (Int_t ievent = 0; ievent < nEvents; ievent++) {
	83	runLoader->GetEvent(ievent);
	84	if ( Debug() )
	85	clu.ExecuteTask("deb all") ;
	86	else
	87	clu.ExecuteTask("pseudo") ;
	88	}
	89	// Unload the Digits and RecPoints
	90	emcalLoader->UnloadDigits() ;
	91	emcalLoader->UnloadRecPoints() ;
f6019cda	92	}
f6019cda	93
a68156e6	94	//____________________________________________________________________________
98e9578e	95	void AliEMCALReconstructor::Reconstruct(AliRunLoader* runLoader, AliRawReader* rawReader) const
98e9578e	96
a68156e6	97	{
98e9578e	98	// Reconstruction loop for Raw Data processing
	99	//
	100	// Only the clusterization is performed
	101	// Track-cluster matching is done in FillESD because the track
	102	// segment maker needs access to the AliESD object to retrieve
	103	// the tracks reconstructed by the global tracking.
a68156e6	104
a68156e6	105	TString headerFile(runLoader->GetFileName()) ;
a68156e6	106	TString branchName(runLoader->GetEventFolder()->GetName()) ;
85c60a8e	107
98e9578e	108	static AliEMCALRawUtils rawUtils;
a68156e6	109	AliEMCALClusterizerv1 clu(headerFile, branchName);
98e9578e	110	AliEMCALLoader emcalLoader = dynamic_cast<AliEMCALLoader>(runLoader->GetDetectorLoader("EMCAL"));
	111
	112	Int_t iEvent = 0;
	113	rawReader->Reset() ;
	114	while (rawReader->NextEvent()) {
	115	runLoader->GetEvent(iEvent++);
	116
	117	rawUtils.Raw2Digits(rawReader);
	118
	119	if ( Debug() )
	120	clu.ExecuteTask("deb pseudo all") ;
	121	else
	122	clu.ExecuteTask("pseudo") ;
	123	// Unload the RecPoints
	124	emcalLoader->UnloadRecPoints() ;
	125	}
a68156e6	126	}
a68156e6	127
f6019cda	128	//____________________________________________________________________________
af885e0f	129	void AliEMCALReconstructor::FillESD(AliRunLoader* runLoader, AliESDEvent* esd) const
f6019cda	130	{
98e9578e	131	// Called by AliReconstruct after Reconstruct() and global tracking and vertexing
98e9578e	132	const double timeScale = 1.e+11; // transition constant from sec to 0.01 ns
92da3372	133
b4975670	134	Int_t eventNumber = runLoader->GetEventNumber() ;
b4975670	135
85c60a8e	136	// Creates AliESDCaloCluster from AliEMCALRecPoints
98e9578e	137	AliEMCALLoader emcalLoader = dynamic_cast<AliEMCALLoader>(runLoader->GetDetectorLoader("EMCAL"));
	138	runLoader->LoadRecPoints("EMCAL");
	139	runLoader->GetEvent(eventNumber);
5dee926e	140	TObjArray *clusters = emcalLoader->RecPoints();
a7a5421e	141	Int_t nClusters = clusters->GetEntries(), nClustersNew=0;
98e9578e	142	AliDebug(1,Form("Event %d: %d clusters",eventNumber,nClusters));
5d9e7bd7	143	// Int_t nRP=0, nPC=0; // in input
a7a5421e	144	esd->SetFirstEMCALCluster(esd->GetNumberOfCaloClusters()); // Put after Phos clusters
92da3372	145
6a0cf740	146	//######################################################
0964c2e9	147	//#########Calculate trigger and set trigger info###########
6a0cf740	148	//######################################################
0964c2e9	149
	150	AliEMCALTrigger tr ;
	151	// tr.SetPatchSize(1);//create 4x4 patches
	152	tr.Trigger();
	153
	154	Float_t maxAmp2x2 = tr.Get2x2MaxAmplitude();
	155	Float_t maxAmpnxn = tr.GetnxnMaxAmplitude();
	156	Float_t ampOutOfPatch2x2 = tr.Get2x2AmpOutOfPatch() ;
	157	Float_t ampOutOfPatchnxn = tr.GetnxnAmpOutOfPatch() ;
	158
98e9578e	159	AliEMCALGeometry * geom = 0;
	160	if (runLoader->GetAliRun() && runLoader->GetAliRun()->GetDetector("EMCAL"))
	161	geom = dynamic_cast<AliEMCAL*>(runLoader->GetAliRun()->GetDetector("EMCAL"))->GetGeometry();
	162	if (geom == 0)
	163	geom = AliEMCALGeometry::GetInstance(AliEMCALGeometry::GetDefaulGeometryName());
	164
0964c2e9	165	Int_t iSM2x2 = tr.Get2x2SuperModule();
	166	Int_t iSMnxn = tr.GetnxnSuperModule();
	167	Int_t iCellPhi2x2 = tr.Get2x2CellPhi();
	168	Int_t iCellPhinxn = tr.GetnxnCellPhi();
	169	Int_t iCellEta2x2 = tr.Get2x2CellEta();
	170	Int_t iCellEtanxn = tr.GetnxnCellEta();
	171
	172	AliDebug(2, Form("Trigger 2x2 max amp %f, out amp %f, SM %d, iphi %d ieta %d", maxAmp2x2, ampOutOfPatch2x2, iSM2x2,iCellPhi2x2, iCellEta2x2));
	173	AliDebug(2, Form("Trigger 4x4 max amp %f , out amp %f, SM %d, iphi %d, ieta %d", maxAmpnxn, ampOutOfPatchnxn, iSMnxn,iCellPhinxn, iCellEtanxn));
	174
	175	TVector3 pos2x2(-1,-1,-1);
	176	TVector3 posnxn(-1,-1,-1);
	177
	178	Int_t iAbsId2x2 = geom->GetAbsCellIdFromCellIndexes( iSM2x2, iCellPhi2x2, iCellEta2x2) ;
	179	Int_t iAbsIdnxn = geom->GetAbsCellIdFromCellIndexes( iSMnxn, iCellPhinxn, iCellEtanxn) ;
	180	geom->GetGlobal(iAbsId2x2, pos2x2);
	181	geom->GetGlobal(iAbsIdnxn, posnxn);
	182
	183	TArrayF triggerPosition(6);
	184	triggerPosition[0] = pos2x2(0) ;
	185	triggerPosition[1] = pos2x2(1) ;
	186	triggerPosition[2] = pos2x2(2) ;
	187	triggerPosition[3] = posnxn(0) ;
	188	triggerPosition[4] = posnxn(1) ;
	189	triggerPosition[5] = posnxn(2) ;
	190
	191	TArrayF triggerAmplitudes(4);
	192	triggerAmplitudes[0] = maxAmp2x2 ;
	193	triggerAmplitudes[1] = ampOutOfPatch2x2 ;
	194	triggerAmplitudes[2] = maxAmpnxn ;
	195	triggerAmplitudes[3] = ampOutOfPatchnxn ;
	196
	197	esd->AddEMCALTriggerPosition(triggerPosition);
	198	esd->AddEMCALTriggerAmplitudes(triggerAmplitudes);
	199
6a0cf740	200	//######################################################
	201	//#######################TRACK MATCHING###############
	202	//######################################################
	203	//Fill list of integers, each one is index of track to which the cluster belongs.
	204
	205	// step 1 - initialize array of matched track indexes
	206	Int_t *matchedTrack = new Int_t[nClusters];
	207	for (Int_t iclus = 0; iclus < nClusters; iclus++)
	208	matchedTrack[iclus] = -1; // neg. index --> no matched track
	209
	210	// step 2, change the flag for all matched clusters found in tracks
	211	Int_t iemcalMatch = -1;
	212	Int_t endtpc = esd->GetNumberOfTracks();
	213	for (Int_t itrack = 0; itrack < endtpc; itrack++) {
	214	AliESDtrack * track = esd->GetTrack(itrack) ; // retrieve track
	215	iemcalMatch = track->GetEMCALcluster();
65f4a419	216	if(iemcalMatch >= 0) matchedTrack[iemcalMatch] = itrack;
6a0cf740	217	}
	218
	219	//########################################
	220	//##############Fill CaloClusters#############
	221	//########################################
0964c2e9	222
0964c2e9	223
5dee926e	224	for (Int_t iClust = 0 ; iClust < nClusters ; iClust++) {
5dee926e	225	const AliEMCALRecPoint * clust = emcalLoader->RecPoint(iClust);
5d9e7bd7	226	//if(clust->GetClusterType()== AliESDCaloCluster::kClusterv1) nRP++; else nPC++;
85c60a8e	227	if (Debug()) clust->Print();
a7a5421e	228	// Get information from EMCAL reconstruction points
85c60a8e	229	Float_t xyz[3];
5dee926e	230	TVector3 gpos;
5dee926e	231	clust->GetGlobalPosition(gpos);
f6019cda	232	for (Int_t ixyz=0; ixyz<3; ixyz++)
5dee926e	233	xyz[ixyz] = gpos[ixyz];
7592dfc4	234
85c60a8e	235	Int_t digitMult = clust->GetMultiplicity();
7592dfc4	236	Short_t *amplList = new Short_t[digitMult];
	237	Short_t *timeList = new Short_t[digitMult];
	238	Short_t *digiList = new Short_t[digitMult];
85c60a8e	239	Float_t *amplFloat = clust->GetEnergiesList();
	240	Float_t *timeFloat = clust->GetTimeList();
	241	Int_t *digitInts = clust->GetAbsId();
8a11aef1	242	Float_t elipAxis[2];
92da3372	243	clust->GetElipsAxis(elipAxis);
7592dfc4	244
7592dfc4	245	// Convert Float_t* and Int_t* to Short_t* to save memory
a7a5421e	246	// Problem : we should recalculate a cluster characteristics when discard digit(s)
f1487f22	247	Int_t newdigitMult = 0;
92da3372	248	for (Int_t iDigit=0; iDigit<digitMult; iDigit++) {
98e9578e	249	if (amplFloat[iDigit] > 0) {
a7a5421e	250	amplList[newdigitMult] = (UShort_t)(amplFloat[iDigit]*500);
98e9578e	251	// Time in units of 0.01 ns = 10 ps
	252	if(timeFloat[iDigit] < 65536./timeScale)
	253	timeList[newdigitMult] = (UShort_t)(timeFloat[iDigit]*timeScale);
	254	else
	255	timeList[newdigitMult] = 65535;
	256	digiList[newdigitMult] = (UShort_t)(digitInts[iDigit]);
	257	newdigitMult++;
92da3372	258	}
98e9578e	259	else if (clust->GetClusterType() != AliESDCaloCluster::kPseudoCluster)
98e9578e	260	Warning("FillESD()","Negative or 0 digit amplitude in cluster");
92da3372	261	}
7592dfc4	262
a7a5421e	263	if(newdigitMult > 0) { // accept cluster if it has some digit
	264	nClustersNew++;
	265	if(newdigitMult != digitMult) { // some digits were deleted
7592dfc4	266	Short_t *amplListNew = new Short_t[newdigitMult];
	267	Short_t *timeListNew = new Short_t[newdigitMult];
	268	Short_t *digiListNew = new Short_t[newdigitMult];
a7a5421e	269	for (Int_t iDigit=0; iDigit<newdigitMult; iDigit++) {
	270	amplListNew[iDigit] = amplList[iDigit];
	271	timeListNew[iDigit] = timeList[iDigit];
	272	digiListNew[iDigit] = digiList[iDigit];
	273	}
7592dfc4	274
a7a5421e	275	delete [] amplList;
	276	delete [] timeList;
	277	delete [] digiList;
7592dfc4	278
a7a5421e	279	amplList = amplListNew;
	280	timeList = timeListNew;
	281	digiList = digiListNew;
	282	}
7592dfc4	283
65721814	284	//Primaries
7592dfc4	285	Int_t parentMult = 0;
	286	Int_t *parentInts = clust->GetParents(parentMult);
	287	Short_t *parentList = new Short_t[parentMult];
	288	for (Int_t ipr=0; ipr<parentMult; ipr++)
	289	parentList[ipr] = (Short_t)(parentInts[ipr]);
	290
	291
a7a5421e	292	// fills the ESDCaloCluster
a7a5421e	293	AliESDCaloCluster * ec = new AliESDCaloCluster() ;
69db97f5	294	ec->SetEMCAL(kTRUE);
a7a5421e	295	ec->SetClusterType(clust->GetClusterType());
7592dfc4	296	ec->SetPosition(xyz);
	297	ec->SetE(clust->GetEnergy());
	298	TArrayS arrayAmpList(newdigitMult,amplList);
	299	TArrayS arrayTimeList(newdigitMult,timeList);
	300	TArrayS arrayIndexList(newdigitMult,digiList);
	301	ec->AddDigitAmplitude(arrayAmpList);
	302	ec->AddDigitTime(arrayTimeList);
	303	ec->AddDigitIndex(arrayIndexList);
	304
a7a5421e	305	if(clust->GetClusterType()== AliESDCaloCluster::kClusterv1){
7592dfc4	306
a7a5421e	307	ec->SetClusterDisp(clust->GetDispersion());
	308	ec->SetClusterChi2(-1); //not yet implemented
	309	ec->SetM02(elipAxis[0]*elipAxis[0]) ;
	310	ec->SetM20(elipAxis[1]*elipAxis[1]) ;
	311	ec->SetM11(-1) ; //not yet implemented
7592dfc4	312
	313	TArrayS arrayTrackMatched(1);// Only one track, temporal solution.
	314	arrayTrackMatched[0]= (Short_t)(matchedTrack[iClust]);
	315	ec->AddTracksMatched(arrayTrackMatched);
	316
	317	TArrayS arrayParents(parentMult,parentList);
	318	ec->AddLabels(arrayParents);
a7a5421e	319	}
7592dfc4	320
6a0cf740	321	// add the cluster to the esd object
a7a5421e	322	esd->AddCaloCluster(ec);
a7a5421e	323	delete ec;
7592dfc4	324
a7a5421e	325	} else { // no new ESD cluster
7592dfc4	326	delete [] amplList;
	327	delete [] timeList;
	328	delete [] digiList;
a7a5421e	329	}
	330	} // cycle on clusters
	331	esd->SetNumberOfEMCALClusters(nClustersNew);
5d9e7bd7	332	//if(nClustersNew != nClusters)
5d9e7bd7	333	//printf(" ##### nClusters %i -> new %i ##### \n", nClusters, nClustersNew );
7592dfc4	334
dc293ae9	335	//Fill ESDCaloCluster with PID weights
dc293ae9	336	AliEMCALPID *pid = new AliEMCALPID;
	337	//pid->SetPrintInfo(kTRUE);
	338	pid->SetReconstructor(kTRUE);
	339	pid->RunPID(esd);
f6019cda	340	}
dc293ae9	341
98e9578e	342