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3bd993ba | 1 | /************************************************************************** |
2 | * Copyright(c) 2004, ALICE Experiment at CERN, All rights reserved. * | |
3 | * * | |
4 | * Author: The ALICE Off-line Project. * | |
5 | * Contributors are mentioned in the code where appropriate. * | |
6 | * * | |
7 | * Permission to use, copy, modify and distribute this software and its * | |
8 | * documentation strictly for non-commercial purposes is hereby granted * | |
9 | * without fee, provided that the above copyright notice appears in all * | |
10 | * copies and that both the copyright notice and this permission notice * | |
11 | * appear in the supporting documentation. The authors make no claims * | |
12 | * about the suitability of this software for any purpose. It is * | |
13 | * provided "as is" without express or implied warranty. * | |
14 | **************************************************************************/ | |
15 | ||
16 | /** @file AliFMDPedestalDA.cxx | |
17 | @author Hans Hjersing Dalsgaard <canute@nbi.dk> | |
18 | @date Mon Mar 10 09:46:05 2008 | |
19 | @brief Derived class for the pedestal detector algorithm. | |
20 | */ | |
21 | // | |
e9c06036 | 22 | // This class implements the virtual functions of the AliFMDBaseDA |
23 | // class. The most important of these functions, FillChannels(..) and | |
24 | // Analyse(...) collect and analyse the data of each channel. The | |
25 | // resulting pedestal and noise values are written to a comma | |
26 | // separated values (csv) file on the go. The csv files produced in | |
27 | // this way are the basic input to the AliFMDPreprocessor. | |
3bd993ba | 28 | // |
29 | ||
30 | #include "AliFMDPedestalDA.h" | |
5cf05dbb | 31 | #include "AliFMDAltroMapping.h" |
408bf2b4 | 32 | #include <iostream> |
33 | #include <fstream> | |
3bd993ba | 34 | #include "AliLog.h" |
35 | #include "TF1.h" | |
f7f0b643 | 36 | #include "TObject.h" |
93519ec4 | 37 | #include "TMath.h" |
408bf2b4 | 38 | #include <TSystem.h> |
3bd993ba | 39 | |
40 | //_____________________________________________________________________ | |
41 | ClassImp(AliFMDPedestalDA) | |
42 | ||
43 | //_____________________________________________________________________ | |
f7f0b643 | 44 | AliFMDPedestalDA::AliFMDPedestalDA() : AliFMDBaseDA(), |
f14ede67 | 45 | fCurrentChannel(1), |
f7f0b643 | 46 | fPedSummary("PedestalSummary","pedestals",51200,0,51200), |
7bce699b | 47 | fNoiseSummary("NoiseSummary","noise",51200,0,51200), |
48 | fZSfileFMD1(), | |
49 | fZSfileFMD2(), | |
5cf05dbb | 50 | fZSfileFMD3(), |
51 | fMinTimebin(3 * 4 * 3 * 16), // 3 ddls, 4 FECs, 3 Altros, 16 channels | |
52 | fMaxTimebin(3 * 4 * 3 * 16) // 3 ddls, 4 FECs, 3 Altros, 16 channels | |
3bd993ba | 53 | { |
5cf05dbb | 54 | // Default constructor |
3bd993ba | 55 | fOutputFile.open("peds.csv"); |
7bce699b | 56 | fZSfileFMD1.open("ddl3072.csv"); |
57 | fZSfileFMD2.open("ddl3073.csv"); | |
58 | fZSfileFMD3.open("ddl3074.csv"); | |
3bd993ba | 59 | } |
60 | ||
61 | //_____________________________________________________________________ | |
62 | AliFMDPedestalDA::AliFMDPedestalDA(const AliFMDPedestalDA & pedDA) : | |
f7f0b643 | 63 | AliFMDBaseDA(pedDA), |
f14ede67 | 64 | fCurrentChannel(1), |
f7f0b643 | 65 | fPedSummary("PedestalSummary","pedestals",51200,0,51200), |
7bce699b | 66 | fNoiseSummary("NoiseSummary","noise",51200,0,51200), |
67 | fZSfileFMD1(), | |
68 | fZSfileFMD2(), | |
5cf05dbb | 69 | fZSfileFMD3(), |
70 | fMinTimebin(pedDA.fMinTimebin), | |
71 | fMaxTimebin(pedDA.fMaxTimebin) | |
3bd993ba | 72 | { |
5cf05dbb | 73 | // Copy constructor |
3bd993ba | 74 | } |
75 | ||
76 | //_____________________________________________________________________ | |
e9c06036 | 77 | AliFMDPedestalDA::~AliFMDPedestalDA() |
78 | { | |
5cf05dbb | 79 | // Destructor. |
3bd993ba | 80 | } |
81 | ||
82 | //_____________________________________________________________________ | |
e9c06036 | 83 | void AliFMDPedestalDA::Init() |
84 | { | |
5cf05dbb | 85 | // Initialise |
3bd993ba | 86 | SetRequiredEvents(1000); |
5cf05dbb | 87 | fMinTimebin.Reset(1024); |
88 | fMaxTimebin.Reset(-1); | |
3bd993ba | 89 | } |
90 | ||
91 | //_____________________________________________________________________ | |
92 | void AliFMDPedestalDA::AddChannelContainer(TObjArray* sectorArray, | |
93 | UShort_t det, | |
e9c06036 | 94 | Char_t ring, |
3bd993ba | 95 | UShort_t sec, |
e9c06036 | 96 | UShort_t strip) |
97 | { | |
5cf05dbb | 98 | // Add a channel to the containers. |
99 | // | |
100 | // Parameters: | |
101 | // sectorArray Array of sectors | |
102 | // det Detector | |
103 | // ring Ring | |
104 | // sec Sector | |
105 | // strip Strip | |
e9c06036 | 106 | AliFMDParameters* pars = AliFMDParameters::Instance(); |
5cf05dbb | 107 | UInt_t samples = pars->GetSampleRate(det, ring, sec, strip); |
e9c06036 | 108 | TObjArray* sampleArray = new TObjArray(samples); |
7bce699b | 109 | sampleArray->SetOwner(); |
110 | for (UInt_t sample = 0; sample < samples; sample++) { | |
e9c06036 | 111 | TH1S* hSample = new TH1S(Form("FMD%d%c[%02d,03%d]_%d", |
112 | det,ring,sec,strip,sample), | |
113 | Form("FMD%d%c[%02d,%03%d]_%d", | |
114 | det,ring,sec,strip), | |
115 | 1024,-.5,1023.5); | |
116 | hSample->SetXTitle("ADC"); | |
117 | hSample->SetYTitle("Events"); | |
7bce699b | 118 | hSample->SetDirectory(0); |
e9c06036 | 119 | sampleArray->AddAt(hSample, sample); |
120 | } | |
121 | sectorArray->AddAtAndExpand(sampleArray, strip); | |
3bd993ba | 122 | } |
123 | ||
124 | //_____________________________________________________________________ | |
e9c06036 | 125 | void AliFMDPedestalDA::FillChannels(AliFMDDigit* digit) |
126 | { | |
5cf05dbb | 127 | // Fill ADC values from a digit into the corresponding histogram. |
128 | // | |
129 | // Parameters: | |
130 | // digit Digit to fill ADC values for. | |
3bd993ba | 131 | UShort_t det = digit->Detector(); |
132 | Char_t ring = digit->Ring(); | |
133 | UShort_t sec = digit->Sector(); | |
134 | UShort_t strip = digit->Strip(); | |
15e37b0a | 135 | |
e9c06036 | 136 | AliFMDParameters* pars = AliFMDParameters::Instance(); |
5cf05dbb | 137 | UInt_t samples = pars->GetSampleRate(det, ring, sec, strip); |
7bce699b | 138 | for (UInt_t sample = 0; sample < samples; sample++) { |
e9c06036 | 139 | TH1S* hSample = GetChannel(det, ring, sec, strip, sample); |
140 | hSample->Fill(digit->Count(sample)); | |
141 | } | |
7bce699b | 142 | |
3bd993ba | 143 | } |
144 | ||
145 | //_____________________________________________________________________ | |
146 | void AliFMDPedestalDA::Analyse(UShort_t det, | |
e9c06036 | 147 | Char_t ring, |
3bd993ba | 148 | UShort_t sec, |
5cf05dbb | 149 | UShort_t strip) |
150 | { | |
151 | // Analyse a strip. That is, compute the mean and spread of the ADC | |
152 | // spectra for all strips. Also output on files the values. | |
153 | // | |
154 | // Parameters: | |
155 | // det Detector | |
156 | // ring Ring | |
157 | // sec Sector | |
158 | // strip Strip. | |
7bce699b | 159 | AliFMDParameters* pars = AliFMDParameters::Instance(); |
762e54b7 | 160 | // Float_t factor = pars->GetPedestalFactor(); |
5cf05dbb | 161 | UInt_t samples = pars->GetSampleRate(det, ring, sec, strip); |
7bce699b | 162 | for (UShort_t sample = 0; sample < samples; sample++) { |
3bd993ba | 163 | |
5cf05dbb | 164 | TH1S* hChannel = GetChannel(det, ring, sec, strip,sample); |
7bce699b | 165 | if(hChannel->GetEntries() == 0) { |
166 | //AliWarning(Form("No entries for FMD%d%c, sector %d, strip %d", | |
167 | // det,ring,sec,strip)); | |
168 | return; | |
e9c06036 | 169 | } |
f7f0b643 | 170 | |
5cf05dbb | 171 | AliDebug(50, Form("Fitting FMD%d%c_%d_%d with %d entries", |
172 | det,ring,sec,strip, hChannel->GetEntries())); | |
7bce699b | 173 | TF1 fitFunc("fitFunc","gausn",0,300); |
174 | fitFunc.SetParameters(100,100,1); | |
175 | hChannel->Fit("fitFunc","Q0+","",10,200); | |
176 | ||
177 | Float_t mean = hChannel->GetMean(); | |
178 | Float_t rms = hChannel->GetRMS(); | |
179 | ||
f7f0b643 | 180 | |
f7f0b643 | 181 | |
7bce699b | 182 | hChannel->GetXaxis()->SetRangeUser(mean-5*rms,mean+5*rms); |
f7f0b643 | 183 | |
7bce699b | 184 | mean = hChannel->GetMean(); |
185 | rms = hChannel->GetRMS(); | |
93519ec4 | 186 | |
7bce699b | 187 | |
188 | UShort_t ddl, board, altro, channel; | |
189 | UShort_t timebin; | |
190 | ||
5cf05dbb | 191 | pars->Detector2Hardware(det,ring,sec,strip,sample, |
192 | ddl,board,altro,channel,timebin); | |
193 | Int_t idx = HWIndex(ddl, board, altro, channel); | |
194 | if (idx >= 0) { | |
195 | fMinTimebin[idx] = TMath::Min(Short_t(timebin), fMinTimebin[idx]); | |
196 | fMaxTimebin[idx] = TMath::Max(Short_t(timebin+1), fMaxTimebin[idx]); | |
197 | } | |
7bce699b | 198 | |
5cf05dbb | 199 | std::ostream* zsFile = 0; |
7bce699b | 200 | switch(det) { |
5cf05dbb | 201 | case 1: zsFile = &fZSfileFMD1; break; |
202 | case 2: zsFile = &fZSfileFMD2; break; | |
203 | case 3: zsFile = &fZSfileFMD3; break; | |
204 | default: AliWarning("Unknown sample!"); break; | |
7bce699b | 205 | |
206 | } | |
5cf05dbb | 207 | *zsFile << board << ',' |
208 | << altro << ',' | |
209 | << channel << ',' | |
210 | << timebin << ',' | |
211 | << mean << ',' | |
276b1261 | 212 | << rms << "\n"; |
7bce699b | 213 | |
214 | Float_t chi2ndf = 0; | |
15e37b0a | 215 | |
216 | ||
7bce699b | 217 | if(fitFunc.GetNDF()) |
218 | chi2ndf = fitFunc.GetChisquare() / fitFunc.GetNDF(); | |
219 | ||
5cf05dbb | 220 | |
15e37b0a | 221 | Int_t sampleToWrite = 2; |
5cf05dbb | 222 | if (samples == 2) sampleToWrite = 1; |
223 | else if (samples < 2) sampleToWrite = 0; | |
15e37b0a | 224 | |
5cf05dbb | 225 | if(sample != sampleToWrite) continue; |
15e37b0a | 226 | |
15e37b0a | 227 | |
5cf05dbb | 228 | fOutputFile << det << ',' |
229 | << ring << ',' | |
230 | << sec << ',' | |
231 | << strip << ',' | |
232 | << mean << ',' | |
233 | << rms << ',' | |
234 | << fitFunc.GetParameter(1) << ',' | |
235 | << fitFunc.GetParameter(2) << ',' | |
236 | << chi2ndf <<"\n"; | |
7bce699b | 237 | |
5cf05dbb | 238 | if(fSaveHistograms ) { |
239 | gDirectory->cd(GetSectorPath(det, ring, sec, kTRUE)); | |
240 | TH1F* sumPed = dynamic_cast<TH1F*>(gDirectory->Get("Pedestals")); | |
241 | TH1F* sumNoise = dynamic_cast<TH1F*>(gDirectory->Get("Noise")); | |
242 | Int_t nStr = (ring == 'I' ? 512 : 256); | |
243 | if (!sumPed) { | |
244 | sumPed = new TH1F("Pedestals", | |
245 | Form("Summary of pedestals in FMD%d%c[%02d]", | |
246 | det, ring, sec), | |
247 | nStr, -.5, nStr-.5); | |
248 | sumPed->SetXTitle("Strip"); | |
249 | sumPed->SetYTitle("Pedestal [ADC]"); | |
250 | sumPed->SetDirectory(gDirectory); | |
251 | } | |
252 | if (!sumNoise) { | |
253 | sumNoise = new TH1F("Noise", | |
254 | Form("Summary of noise in FMD%d%c[%02d]", | |
7bce699b | 255 | det, ring, sec), |
256 | nStr, -.5, nStr-.5); | |
5cf05dbb | 257 | sumNoise->SetXTitle("Strip"); |
258 | sumNoise->SetYTitle("Noise [ADC]"); | |
7bce699b | 259 | |
5cf05dbb | 260 | sumNoise->SetDirectory(gDirectory); |
7bce699b | 261 | } |
5cf05dbb | 262 | sumPed->SetBinContent(strip+1, mean); |
263 | sumPed->SetBinError(strip+1, rms); | |
264 | sumNoise->SetBinContent(strip+1, rms); | |
265 | ||
266 | if(sumNoise->GetEntries() == nStr) | |
267 | sumNoise->Write(sumNoise->GetName(),TObject::kOverwrite); | |
268 | if(sumPed->GetEntries() == nStr) | |
269 | sumPed->Write(sumPed->GetName(),TObject::kOverwrite); | |
270 | ||
271 | fPedSummary.SetBinContent(fCurrentChannel,mean); | |
272 | ||
273 | fNoiseSummary.SetBinContent(fCurrentChannel,rms); | |
274 | fCurrentChannel++; | |
275 | ||
276 | gDirectory->cd(GetStripPath(det, ring, sec, strip, kTRUE)); | |
277 | hChannel->GetXaxis()->SetRange(1,1024); | |
278 | ||
279 | hChannel->Write(); | |
7bce699b | 280 | } |
281 | } | |
3bd993ba | 282 | } |
283 | ||
f7f0b643 | 284 | //_____________________________________________________________________ |
285 | void AliFMDPedestalDA::Terminate(TFile* diagFile) | |
286 | { | |
5cf05dbb | 287 | // Called at the end of a job. Fills in missing time-bins and |
288 | // closes output files | |
7bce699b | 289 | if(fSaveHistograms) { |
290 | diagFile->cd(); | |
291 | ||
292 | fPedSummary.Write(); | |
293 | fNoiseSummary.Write(); | |
294 | } | |
5cf05dbb | 295 | AliFMDAltroMapping* map = AliFMDParameters::Instance()->GetAltroMap(); |
276b1261 | 296 | for (Int_t i = 0; i < 3; i++) { |
297 | std::ofstream& out = (i == 0 ? fZSfileFMD1 : | |
298 | i == 1 ? fZSfileFMD2 : | |
299 | fZSfileFMD3); | |
300 | if (out.is_open() && fSeenDetectors[i]) { | |
301 | FillinTimebins(out, map->Detector2DDL(i+1)); | |
302 | } | |
408bf2b4 | 303 | if (!fSeenDetectors[i]) { |
304 | TString n(Form("ddl%d.csv",3072+map->Detector2DDL(i+1))); | |
305 | gSystem->Unlink(n.Data()); | |
306 | } | |
307 | } | |
f7f0b643 | 308 | |
5cf05dbb | 309 | } |
310 | ||
311 | //_____________________________________________________________________ | |
7af3df7f | 312 | void AliFMDPedestalDA::FillinTimebins(std::ofstream& out, UShort_t /*ddl*/) |
5cf05dbb | 313 | { |
762e54b7 | 314 | #if 0 |
5cf05dbb | 315 | unsigned short boards[] = { 0x0, 0x1, 0x10, 0x11, 0xFFFF }; |
316 | unsigned short* board = boards; | |
317 | while ((*boards) != 0xFFFF) { | |
318 | for (UShort_t altro = 0; altro < 3; altro++) { | |
319 | for (UShort_t channel = 0; channel < 16; channel++) { | |
320 | Int_t idx = HWIndex(ddl, *board, altro, channel); | |
321 | if (idx < 0) { | |
322 | AliWarning(Form("Invalid index for %4d/0x%02x/0x%x/0x%x: %d", | |
323 | ddl, *board, altro, channel, idx)); | |
324 | continue; | |
325 | } | |
326 | Short_t min = fMinTimebin[idx]; | |
327 | Short_t max = fMaxTimebin[idx]; | |
328 | ||
329 | // Channel not seen at all. | |
330 | if (min > 1023 || max < 0) continue; | |
331 | ||
332 | out << "# Extra timebins for 0x" << std::hex | |
333 | << board << ',' << altro << ',' << channel | |
334 | << " got time-bins " << min << " to " << max-1 | |
335 | << std::dec << std::endl; | |
336 | ||
337 | for (UShort_t t = 15; t < min; t++) | |
338 | // Write a phony line | |
339 | out << board << "," << altro << "," << channel << "," | |
340 | << t << "," << 1023 << "," << 0 << std::endl; | |
341 | ||
342 | for (UShort_t t = max; t < 1024; t++) | |
343 | // Write a phony line | |
344 | out << board << "," << altro << "," << channel << "," | |
345 | << t << "," << 1023 << "," << 0 << std::endl; | |
346 | } // channel loop | |
347 | } // altro loop | |
348 | } // board loop | |
349 | // Write trailer, and close | |
762e54b7 | 350 | #endif |
5cf05dbb | 351 | out.write("# EOF\n", 6); |
352 | out.close(); | |
f7f0b643 | 353 | } |
354 | ||
3bd993ba | 355 | //_____________________________________________________________________ |
e9c06036 | 356 | void AliFMDPedestalDA::WriteHeaderToFile() |
357 | { | |
5cf05dbb | 358 | // Write headers to output files |
80fdb9f3 | 359 | AliFMDParameters* pars = AliFMDParameters::Instance(); |
360 | fOutputFile.write(Form("# %s \n",pars->GetPedestalShuttleID()),13); | |
f7f0b643 | 361 | fOutputFile.write("# Detector, " |
362 | "Ring, " | |
363 | "Sector, " | |
e9c06036 | 364 | "Strip, " |
e9c06036 | 365 | "Pedestal, " |
366 | "Noise, " | |
367 | "Mu, " | |
368 | "Sigma, " | |
f7f0b643 | 369 | "Chi2/NDF \n", 71); |
5cf05dbb | 370 | |
371 | std::ostream* zss[] = { &fZSfileFMD1, &fZSfileFMD2, &fZSfileFMD3, 0 }; | |
372 | for (size_t i = 0; i < 3; i++) | |
373 | *(zss[i]) << "# FMD 1 pedestals \n" | |
374 | << "# board, " | |
375 | << "altro, " | |
376 | << "channel, " | |
377 | << "timebin, " | |
378 | << "pedestal, " | |
762e54b7 | 379 | << "noise\n"; |
3bd993ba | 380 | } |
381 | ||
382 | //_____________________________________________________________________ | |
e9c06036 | 383 | TH1S* AliFMDPedestalDA::GetChannel(UShort_t det, |
384 | Char_t ring, | |
385 | UShort_t sec, | |
7bce699b | 386 | UShort_t strip, |
5cf05dbb | 387 | UInt_t sample) |
e9c06036 | 388 | { |
5cf05dbb | 389 | // Get the histogram corresponding to a strip sample. |
390 | // | |
391 | // Parameters: | |
392 | // det Detector | |
393 | // ring Ring | |
394 | // sec Sector | |
395 | // strip Strip | |
396 | // sample Sample | |
397 | // | |
398 | // Return: | |
399 | // ADC spectra of a strip. | |
400 | UShort_t iring = (ring == 'O' ? 0 : 1); | |
401 | TObjArray* detArray = static_cast<TObjArray*>(fDetectorArray.At(det)); | |
402 | TObjArray* ringArray = static_cast<TObjArray*>(detArray->At(iring)); | |
403 | TObjArray* secArray = static_cast<TObjArray*>(ringArray->At(sec)); | |
404 | TObjArray* sampleArray = static_cast<TObjArray*>(secArray->At(strip)); | |
405 | TH1S* hSample = static_cast<TH1S*>(sampleArray->At(sample)); | |
e9c06036 | 406 | return hSample; |
7bce699b | 407 | |
3bd993ba | 408 | } |
93519ec4 | 409 | |
3bd993ba | 410 | //_____________________________________________________________________ |
411 | // | |
412 | //EOF | |
413 | // |