[u/mrichter/AliRoot.git] / PWG3 / hfe / AliHFEtaggedTrackAnalysis.cxx

/**************************************************************************
* Copyright(c) 1998-1999, ALICE Experiment at CERN, All rights reserved. *
*                                                                        *
* Author: The ALICE Off-line Project.                                    *
* Contributors are mentioned in the code where appropriate.              *
*                                                                        *
* Permission to use, copy, modify and distribute this software and its   *
* documentation strictly for non-commercial purposes is hereby granted   *
* without fee, provided that the above copyright notice appears in all   *
* copies and that both the copyright notice and this permission notice   *
* appear in the supporting documentation. The authors make no claims     *
* about the suitability of this software for any purpose. It is          *
* provided "as is" without express or implied warranty.                  *
**************************************************************************/

/* $Id$ */

//
// Class AliHFEtaggedTrackAnalysis
// Analyses tracks with an apriori PID information (i.e. using the daugther
// tracks from well-identified decays of neutral charged particles). Tracks
// are processed in the Process function, where given tracks are filtered 
// via the track cuts and used for PID later. The plugin fills Correction
// Framework containers and additional PID QA containers
//
// Author:
//   Markus Fasel <M.Fasel@gsi.de>
//
#include "AliCFCutBase.h"
#include "AliCFContainer.h"
#include "AliCFManager.h"
#include "AliESDtrack.h"
#include "AliLog.h"
#include "AliPID.h"
#include "AliExternalTrackParam.h"

#include "AliHFEcollection.h"
#include "AliHFEcontainer.h"
#include "AliHFEcuts.h"
#include "AliHFEpid.h"
#include "AliHFEpidTPC.h"
#include "AliHFEpidQAmanager.h"
#include "AliHFEtaggedTrackAnalysis.h"
#include "AliHFEvarManager.h"

ClassImp(AliHFEtaggedTrackAnalysis)

//____________________________________________________________
AliHFEtaggedTrackAnalysis::AliHFEtaggedTrackAnalysis():
    TObject()
  , fVarManager(NULL)
  , fContainer(NULL)
  , fPID(NULL)
  , fPIDqa(NULL)
  , fCuts(NULL)
  , fCFM(NULL)
  , fQAhistos(NULL)
  , fClean(kFALSE)
  , fMagneticField(0.0)
  , fVariablesTRD(kFALSE)
{
  //
  // Default constructor
  //
  fVarManager = new AliHFEvarManager("taggedTrackVarManager");
  fVarManager->AddVariable("pt");
  fVarManager->AddVariable("eta");
  fVarManager->AddVariable("phi");
  fVarManager->AddVariable("charge");
  fVarManager->AddVariable("species");
  fPIDqa = new AliHFEpidQAmanager;
  fCFM = new AliCFManager;
  SetBit(kIsOwner, kTRUE);
}

//____________________________________________________________
AliHFEtaggedTrackAnalysis::AliHFEtaggedTrackAnalysis(const AliHFEtaggedTrackAnalysis &ref):
    TObject(ref)
  , fVarManager(ref.fVarManager)
  , fContainer(NULL)
  , fPID(ref.fPID)
  , fPIDqa(ref.fPIDqa)
  , fCuts(ref.fCuts)
  , fCFM(ref.fCFM)
  , fQAhistos(ref.fQAhistos)
  , fClean(ref.fClean)
  , fMagneticField(ref.fMagneticField)
  , fVariablesTRD(ref.fVariablesTRD)
{
  //
  // Copy constructor
  //
  if(ref.fContainer){
    InitContainer();
  }
  SetBit(kIsOwner, kFALSE);
}

//____________________________________________________________
AliHFEtaggedTrackAnalysis &AliHFEtaggedTrackAnalysis::operator=(const AliHFEtaggedTrackAnalysis &ref){
  //
  // Assignment operator
  //
  if(&ref != this){
    fVarManager = ref.fVarManager;
    fPID = ref.fPID;
    fPIDqa = ref.fPIDqa;
    fCuts = ref.fCuts;
    fCFM = ref.fCFM;
    fQAhistos = ref.fQAhistos;
    fClean = ref.fClean;
    fMagneticField = ref.fMagneticField;
    fVariablesTRD = ref.fVariablesTRD;

    if(ref.fContainer) InitContainer();
   
    SetBit(kIsOwner, kFALSE); 
    SetBit(kIsOwnerCuts, kFALSE);
  }
  return *this;
}

//____________________________________________________________
AliHFEtaggedTrackAnalysis::~AliHFEtaggedTrackAnalysis(){
  //
  // Destructor
  //
  if(TestBit(kIsOwner)){
    if(fVarManager) delete fVarManager;
    if(fPIDqa) delete fPIDqa;
  }
  if(TestBit(kIsOwnerCuts)) delete fCuts;
  if(fContainer) delete fContainer;
}

//____________________________________________________________
void AliHFEtaggedTrackAnalysis::InitContainer(){
  //
  // Initialize output container
  //
  if(fContainer) return;
  Int_t nStepPID = 0;
  if(!fPID){
    AliError("No PID set - defining container without PID steps");
  } else {
    nStepPID = fPID->GetNumberOfPIDdetectors();
  }
  fContainer = new AliHFEcontainer("containerV0");
  fVarManager->DefineVariables(fContainer);
  fContainer->CreateContainer("taggedTrackContainerReco", "Container for Tagged Tracks", AliHFEcuts::kNcutStepsRecTrack + nStepPID);

  // Set the step titles
  for(Int_t istep = 0; istep < AliHFEcuts::kNcutStepsRecTrack; istep++)
    fContainer->SetStepTitle("taggedTrackContainerReco", AliHFEcuts::RecoCutName(istep), istep);
  for(Int_t ipid = 0; ipid < nStepPID; ipid++){
    fContainer->SetStepTitle("taggedTrackContainerReco", fPID->SortedDetectorName(ipid), ipid + AliHFEcuts::kNcutStepsRecTrack);
  }
  fCFM->SetParticleContainer(fContainer->GetCFContainer("taggedTrackContainerReco"));

  // temporarily special QA
  fQAhistos = new AliHFEcollection("taggedTrackQA", "Special QA for the TaggedTrackAnalysis");
  fQAhistos->CreateTH2F("TPCclusters2_1", "TPCclusterInfo for findable clusters for 2 neighbors", 30, 0.1, 10., 162, 0., 161.);
  fQAhistos->CreateTH2F("TPCclusters2_0", "TPCclusterInfo for the ratio for 2 neighbors", 30, 0.1, 10., 110, 0., 1.1);
  fQAhistos->CreateTH2F("TPCncls", "TPC number of clusters", 30, 0.1, 10., 162, 0., 161.);
  fQAhistos->CreateTH2F("TPCclr", "TPC cluster ratio", 30, 0.1, 10., 110, 0., 1.1);
  fQAhistos->BinLogAxis("TPCclusters2_1", 0);   // pt axis in logarithmic binning
  fQAhistos->BinLogAxis("TPCclusters2_0", 0);   // pt axis in logarithmic binning
  fQAhistos->BinLogAxis("TPCncls", 0);   // pt axis in logarithmic binning
  fQAhistos->BinLogAxis("TPCclr", 0);   // pt axis in logarithmic binning
}

//____________________________________________________________
void AliHFEtaggedTrackAnalysis::ProcessTrack(AliVParticle *track, Int_t abinitioPID){
  //
  // Filter tracks tagged by V0 PID class
  //
  //
  fVarManager->NewTrack(track, NULL, 0., abinitioPID, kTRUE);


  // Phi Angle
  if(fVariablesTRD) {
    AliESDtrack *esdtrackc = dynamic_cast<AliESDtrack *>(track);
    if(esdtrackc) {
      
      const AliExternalTrackParam *trueparam = NULL;
      if(esdtrackc->GetOuterParam()) {
	      trueparam = esdtrackc->GetOuterParam();
	      fVarManager->NewTrack((AliVParticle *)trueparam, NULL, 0., abinitioPID, kTRUE);
      }
      else return;
    }
  }
  

  // Try a loose cut to reject pion contamination
  if(fClean) {
    if(abinitioPID == AliPID::kElectron){
      AliHFEpidTPC *pidTPC = (AliHFEpidTPC *) fPID->GetDetPID(AliHFEpid::kTPCpid);
      if(pidTPC) {
	      Double_t numberOfSigmaTPC = pidTPC->NumberOfSigmas(track,AliPID::kElectron,AliHFEpidObject::kESDanalysis);
	      if(numberOfSigmaTPC < -5) return;
      }
    }
  }
  // temporarily monitoring of the number of TPC clusters 
  AliESDtrack *esdtrack = dynamic_cast<AliESDtrack *>(track);
  if(esdtrack && abinitioPID == AliPID::kElectron){
    if((esdtrack->GetITSClusterMap() & (BIT(0) | BIT(1))) && (TMath::Abs(esdtrack->Eta()) < 0.8)){  // Only select quasi-primary tracks
      fQAhistos->Fill("TPCclusters2_1", track->Pt(), esdtrack->GetTPCClusterInfo(2,1));
      fQAhistos->Fill("TPCclusters2_0", track->Pt(), esdtrack->GetTPCNclsF() > 0 ? esdtrack->GetTPCClusterInfo(2,1)/esdtrack->GetTPCNclsF() : 0.);
      fQAhistos->Fill("TPCncls", track->Pt(), esdtrack->GetTPCNcls());
      fQAhistos->Fill("TPCclr", track->Pt(), esdtrack->GetTPCNclsF() > 0 ? static_cast<Double_t>(esdtrack->GetTPCNcls())/static_cast<Double_t>(esdtrack->GetTPCNclsF()) : 0.);
    }
   }
   
  Int_t offset = AliHFEcuts::kStepRecKineITSTPC;
  fVarManager->FillContainer(fCFM->GetParticleContainer(), 0); // Fill Container without filtering
  
  Bool_t survived = kTRUE;
  for(Int_t icut = AliHFEcuts::kStepRecKineITSTPC; icut <= AliHFEcuts::kStepHFEcutsTRD; icut++){
    AliDebug(2, Form("Checking cut %d for species %s", icut + AliHFEcuts::kNcutStepsMCTrack, AliPID::ParticleName(abinitioPID)));
    /*
      TObjArray *cutlist = fCFM->GetParticleCutsList(icut + AliHFEcuts::kNcutStepsMCTrack);
      if(!cutlist){
      AliDebug(2, Form("No cuts for step %d set", icut + AliHFEcuts::kNcutStepsMCTrack));
      } else {
      AliDebug(2, Form("Cut Collection %s", cutlist->GetName()));
      TIter cutiter(cutlist);
      AliCFCutBase *cut;
      while((cut = dynamic_cast<AliCFCutBase *>(cutiter()))){
      AliDebug(2, Form("Cut object %s, QA on? %s", cut->GetName(), cut->IsQAOn() ? "yes" : "no"));
      }
      }
    */
    //if(!fCFM->CheckParticleCuts(icut + AliHFEcuts::kNcutStepsMCTrack, (TObject *)track)){
    if(!fCuts->CheckParticleCuts(icut + AliHFEcuts::kNcutStepsMCTrack, (TObject *)track)){
      AliDebug(2, Form("Track didn' survive cut %d", icut + AliHFEcuts::kNcutStepsMCTrack));
      survived = kFALSE;
      break;
    }
    AliDebug(2, Form("Cut passed, filling container %d", icut - offset + 1));
    fVarManager->FillContainer(fCFM->GetParticleContainer(), icut - offset + 1);
  }
  
   if(survived){
     AliDebug(2, "Use track in the PID");
     // Apply PID
     AliHFEpidObject hfetrack;
     hfetrack.SetAnalysisType(AliHFEpidObject::kESDanalysis);
     hfetrack.SetRecTrack(track);
     hfetrack.SetAbInitioPID(abinitioPID);
     fPID->SetVarManager(fVarManager);
     fPID->IsSelected(&hfetrack, fContainer, "taggedTrackContainer", fPIDqa);
   }
}

//____________________________________________________________
void AliHFEtaggedTrackAnalysis::SetCuts(AliHFEcuts *cuts){
  //
  // Set HFE cuts to be used to filter the tagged tracks
  //
  if(!cuts){
    AliWarning("Nob cuts provided - Using standard cuts");
    fCuts = new AliHFEcuts("cutsTagged", "HFE Cuts for the V0 tagged tracks");
    fCuts->CreateStandardCuts();
    fCuts->SetQAOn();
    SetBit(kIsOwnerCuts);
  } else {
    AliDebug(1, "Setting single track cuts");
    fCuts = cuts;
  }
  const Int_t kNcutSteps = AliHFEcuts::kNcutStepsMCTrack + AliHFEcuts::kNcutStepsRecTrack + AliHFEcuts::kNcutStepsDETrack;
  printf("Setting Number of cut steps %d\n", kNcutSteps);
  fCFM->SetNStepParticle(kNcutSteps);
  for(Int_t istep = 0; istep < kNcutSteps; istep++)
    fCFM->SetParticleCutsList(istep, NULL);

  fCuts->Initialize(fCFM); 
}

//____________________________________________________________
void AliHFEtaggedTrackAnalysis::SetPID(AliHFEpid *pid){
  //
  // Set the PID and initialize the the QA manager
  //
  fPID = pid;
  fPIDqa->Initialize(fPID);
}

//____________________________________________________________
TList *AliHFEtaggedTrackAnalysis::GetPIDQA() const {
  //
  // return PID QA 
  //
  return fPIDqa->MakeList("PIDqa_taggedTracks");
}

//____________________________________________________________
TList *AliHFEtaggedTrackAnalysis::GetCutQA() const {
  //
  // return Cut QA
  //
  return fCuts->GetQAhistograms();
}
Commit	Line	Data
3a72645a	1	/**************************************************************************
	2	* Copyright(c) 1998-1999, ALICE Experiment at CERN, All rights reserved. *
	3	* *
	4	* Author: The ALICE Off-line Project. *
	5	* Contributors are mentioned in the code where appropriate. *
	6	* *
	7	* Permission to use, copy, modify and distribute this software and its *
	8	* documentation strictly for non-commercial purposes is hereby granted *
	9	* without fee, provided that the above copyright notice appears in all *
	10	* copies and that both the copyright notice and this permission notice *
	11	* appear in the supporting documentation. The authors make no claims *
	12	* about the suitability of this software for any purpose. It is *
	13	* provided "as is" without express or implied warranty. *
	14	**************************************************************************/
27de2dfb	15
	16	/* $Id$ */
	17
3a72645a	18	//
	19	// Class AliHFEtaggedTrackAnalysis
	20	// Analyses tracks with an apriori PID information (i.e. using the daugther
	21	// tracks from well-identified decays of neutral charged particles). Tracks
	22	// are processed in the Process function, where given tracks are filtered
	23	// via the track cuts and used for PID later. The plugin fills Correction
	24	// Framework containers and additional PID QA containers
	25	//
	26	// Author:
	27	// Markus Fasel <M.Fasel@gsi.de>
	28	//
	29	#include "AliCFCutBase.h"
	30	#include "AliCFContainer.h"
	31	#include "AliCFManager.h"
bf892a6a	32	#include "AliESDtrack.h"
3a72645a	33	#include "AliLog.h"
3a72645a	34	#include "AliPID.h"
e3ae862b	35	#include "AliExternalTrackParam.h"
3a72645a	36
bf892a6a	37	#include "AliHFEcollection.h"
3a72645a	38	#include "AliHFEcontainer.h"
	39	#include "AliHFEcuts.h"
	40	#include "AliHFEpid.h"
6555e2ad	41	#include "AliHFEpidTPC.h"
3a72645a	42	#include "AliHFEpidQAmanager.h"
	43	#include "AliHFEtaggedTrackAnalysis.h"
	44	#include "AliHFEvarManager.h"
	45
	46	ClassImp(AliHFEtaggedTrackAnalysis)
	47
	48	//____________________________________________________________
	49	AliHFEtaggedTrackAnalysis::AliHFEtaggedTrackAnalysis():
	50	TObject()
	51	, fVarManager(NULL)
	52	, fContainer(NULL)
	53	, fPID(NULL)
	54	, fPIDqa(NULL)
	55	, fCuts(NULL)
	56	, fCFM(NULL)
bf892a6a	57	, fQAhistos(NULL)
6555e2ad	58	, fClean(kFALSE)
e3ae862b	59	, fMagneticField(0.0)
e3ae862b	60	, fVariablesTRD(kFALSE)
3a72645a	61	{
	62	//
	63	// Default constructor
	64	//
	65	fVarManager = new AliHFEvarManager("taggedTrackVarManager");
	66	fVarManager->AddVariable("pt");
	67	fVarManager->AddVariable("eta");
	68	fVarManager->AddVariable("phi");
	69	fVarManager->AddVariable("charge");
	70	fVarManager->AddVariable("species");
	71	fPIDqa = new AliHFEpidQAmanager;
	72	fCFM = new AliCFManager;
	73	SetBit(kIsOwner, kTRUE);
	74	}
	75
	76	//____________________________________________________________
	77	AliHFEtaggedTrackAnalysis::AliHFEtaggedTrackAnalysis(const AliHFEtaggedTrackAnalysis &ref):
	78	TObject(ref)
	79	, fVarManager(ref.fVarManager)
	80	, fContainer(NULL)
	81	, fPID(ref.fPID)
	82	, fPIDqa(ref.fPIDqa)
	83	, fCuts(ref.fCuts)
	84	, fCFM(ref.fCFM)
bf892a6a	85	, fQAhistos(ref.fQAhistos)
6555e2ad	86	, fClean(ref.fClean)
e3ae862b	87	, fMagneticField(ref.fMagneticField)
e3ae862b	88	, fVariablesTRD(ref.fVariablesTRD)
3a72645a	89	{
	90	//
	91	// Copy constructor
	92	//
	93	if(ref.fContainer){
	94	InitContainer();
	95	}
	96	SetBit(kIsOwner, kFALSE);
	97	}
	98
	99	//____________________________________________________________
	100	AliHFEtaggedTrackAnalysis &AliHFEtaggedTrackAnalysis::operator=(const AliHFEtaggedTrackAnalysis &ref){
	101	//
	102	// Assignment operator
	103	//
	104	if(&ref != this){
	105	fVarManager = ref.fVarManager;
	106	fPID = ref.fPID;
	107	fPIDqa = ref.fPIDqa;
	108	fCuts = ref.fCuts;
	109	fCFM = ref.fCFM;
bf892a6a	110	fQAhistos = ref.fQAhistos;
6555e2ad	111	fClean = ref.fClean;
e3ae862b	112	fMagneticField = ref.fMagneticField;
e3ae862b	113	fVariablesTRD = ref.fVariablesTRD;
3a72645a	114
	115	if(ref.fContainer) InitContainer();
	116
	117	SetBit(kIsOwner, kFALSE);
	118	SetBit(kIsOwnerCuts, kFALSE);
	119	}
	120	return *this;
	121	}
	122
	123	//____________________________________________________________
	124	AliHFEtaggedTrackAnalysis::~AliHFEtaggedTrackAnalysis(){
	125	//
	126	// Destructor
	127	//
	128	if(TestBit(kIsOwner)){
	129	if(fVarManager) delete fVarManager;
	130	if(fPIDqa) delete fPIDqa;
	131	}
	132	if(TestBit(kIsOwnerCuts)) delete fCuts;
	133	if(fContainer) delete fContainer;
	134	}
	135
	136	//____________________________________________________________
	137	void AliHFEtaggedTrackAnalysis::InitContainer(){
	138	//
	139	// Initialize output container
	140	//
	141	if(fContainer) return;
	142	Int_t nStepPID = 0;
	143	if(!fPID){
	144	AliError("No PID set - defining container without PID steps");
	145	} else {
	146	nStepPID = fPID->GetNumberOfPIDdetectors();
	147	}
	148	fContainer = new AliHFEcontainer("containerV0");
	149	fVarManager->DefineVariables(fContainer);
	150	fContainer->CreateContainer("taggedTrackContainerReco", "Container for Tagged Tracks", AliHFEcuts::kNcutStepsRecTrack + nStepPID);
	151
	152	// Set the step titles
	153	for(Int_t istep = 0; istep < AliHFEcuts::kNcutStepsRecTrack; istep++)
	154	fContainer->SetStepTitle("taggedTrackContainerReco", AliHFEcuts::RecoCutName(istep), istep);
	155	for(Int_t ipid = 0; ipid < nStepPID; ipid++){
	156	fContainer->SetStepTitle("taggedTrackContainerReco", fPID->SortedDetectorName(ipid), ipid + AliHFEcuts::kNcutStepsRecTrack);
	157	}
	158	fCFM->SetParticleContainer(fContainer->GetCFContainer("taggedTrackContainerReco"));
bf892a6a	159
	160	// temporarily special QA
	161	fQAhistos = new AliHFEcollection("taggedTrackQA", "Special QA for the TaggedTrackAnalysis");
	162	fQAhistos->CreateTH2F("TPCclusters2_1", "TPCclusterInfo for findable clusters for 2 neighbors", 30, 0.1, 10., 162, 0., 161.);
e3ae862b	163	fQAhistos->CreateTH2F("TPCclusters2_0", "TPCclusterInfo for the ratio for 2 neighbors", 30, 0.1, 10., 110, 0., 1.1);
ccc37cdc	164	fQAhistos->CreateTH2F("TPCncls", "TPC number of clusters", 30, 0.1, 10., 162, 0., 161.);
ccc37cdc	165	fQAhistos->CreateTH2F("TPCclr", "TPC cluster ratio", 30, 0.1, 10., 110, 0., 1.1);
bf892a6a	166	fQAhistos->BinLogAxis("TPCclusters2_1", 0); // pt axis in logarithmic binning
bf892a6a	167	fQAhistos->BinLogAxis("TPCclusters2_0", 0); // pt axis in logarithmic binning
ccc37cdc	168	fQAhistos->BinLogAxis("TPCncls", 0); // pt axis in logarithmic binning
ccc37cdc	169	fQAhistos->BinLogAxis("TPCclr", 0); // pt axis in logarithmic binning
3a72645a	170	}
	171
	172	//____________________________________________________________
	173	void AliHFEtaggedTrackAnalysis::ProcessTrack(AliVParticle *track, Int_t abinitioPID){
	174	//
	175	// Filter tracks tagged by V0 PID class
	176	//
e3ae862b	177	//
3a72645a	178	fVarManager->NewTrack(track, NULL, 0., abinitioPID, kTRUE);
e3ae862b	179
	180
	181
	182	// Phi Angle
	183	if(fVariablesTRD) {
	184	AliESDtrack esdtrackc = dynamic_cast<AliESDtrack >(track);
	185	if(esdtrackc) {
	186
	187	const AliExternalTrackParam *trueparam = NULL;
	188	if(esdtrackc->GetOuterParam()) {
	189	trueparam = esdtrackc->GetOuterParam();
	190	fVarManager->NewTrack((AliVParticle *)trueparam, NULL, 0., abinitioPID, kTRUE);
	191	}
	192	else return;
	193	}
	194	}
	195
	196
	197	// Try a loose cut to reject pion contamination
	198	if(fClean) {
	199	if(abinitioPID == AliPID::kElectron){
	200	AliHFEpidTPC pidTPC = (AliHFEpidTPC ) fPID->GetDetPID(AliHFEpid::kTPCpid);
	201	if(pidTPC) {
	202	Double_t numberOfSigmaTPC = pidTPC->NumberOfSigmas(track,AliPID::kElectron,AliHFEpidObject::kESDanalysis);
	203	if(numberOfSigmaTPC < -5) return;
	204	}
	205	}
	206	}
	207	// temporarily monitoring of the number of TPC clusters
	208	AliESDtrack esdtrack = dynamic_cast<AliESDtrack >(track);
	209	if(esdtrack && abinitioPID == AliPID::kElectron){
	210	if((esdtrack->GetITSClusterMap() & (BIT(0) \| BIT(1))) && (TMath::Abs(esdtrack->Eta()) < 0.8)){ // Only select quasi-primary tracks
	211	fQAhistos->Fill("TPCclusters2_1", track->Pt(), esdtrack->GetTPCClusterInfo(2,1));
	212	fQAhistos->Fill("TPCclusters2_0", track->Pt(), esdtrack->GetTPCNclsF() > 0 ? esdtrack->GetTPCClusterInfo(2,1)/esdtrack->GetTPCNclsF() : 0.);
ccc37cdc	213	fQAhistos->Fill("TPCncls", track->Pt(), esdtrack->GetTPCNcls());
ccc37cdc	214	fQAhistos->Fill("TPCclr", track->Pt(), esdtrack->GetTPCNclsF() > 0 ? static_cast<Double_t>(esdtrack->GetTPCNcls())/static_cast<Double_t>(esdtrack->GetTPCNclsF()) : 0.);
e3ae862b	215	}
	216	}
	217
3a72645a	218	Int_t offset = AliHFEcuts::kStepRecKineITSTPC;
	219	fVarManager->FillContainer(fCFM->GetParticleContainer(), 0); // Fill Container without filtering
	220
	221	Bool_t survived = kTRUE;
	222	for(Int_t icut = AliHFEcuts::kStepRecKineITSTPC; icut <= AliHFEcuts::kStepHFEcutsTRD; icut++){
	223	AliDebug(2, Form("Checking cut %d for species %s", icut + AliHFEcuts::kNcutStepsMCTrack, AliPID::ParticleName(abinitioPID)));
e3ae862b	224	/*
	225	TObjArray *cutlist = fCFM->GetParticleCutsList(icut + AliHFEcuts::kNcutStepsMCTrack);
	226	if(!cutlist){
3a72645a	227	AliDebug(2, Form("No cuts for step %d set", icut + AliHFEcuts::kNcutStepsMCTrack));
e3ae862b	228	} else {
3a72645a	229	AliDebug(2, Form("Cut Collection %s", cutlist->GetName()));
	230	TIter cutiter(cutlist);
	231	AliCFCutBase *cut;
	232	while((cut = dynamic_cast<AliCFCutBase *>(cutiter()))){
e3ae862b	233	AliDebug(2, Form("Cut object %s, QA on? %s", cut->GetName(), cut->IsQAOn() ? "yes" : "no"));
3a72645a	234	}
e3ae862b	235	}
e3ae862b	236	*/
3a72645a	237	//if(!fCFM->CheckParticleCuts(icut + AliHFEcuts::kNcutStepsMCTrack, (TObject *)track)){
	238	if(!fCuts->CheckParticleCuts(icut + AliHFEcuts::kNcutStepsMCTrack, (TObject *)track)){
	239	AliDebug(2, Form("Track didn' survive cut %d", icut + AliHFEcuts::kNcutStepsMCTrack));
	240	survived = kFALSE;
	241	break;
	242	}
	243	AliDebug(2, Form("Cut passed, filling container %d", icut - offset + 1));
	244	fVarManager->FillContainer(fCFM->GetParticleContainer(), icut - offset + 1);
	245	}
bf892a6a	246
bf892a6a	247	if(survived){
e3ae862b	248	AliDebug(2, "Use track in the PID");
	249	// Apply PID
	250	AliHFEpidObject hfetrack;
	251	hfetrack.SetAnalysisType(AliHFEpidObject::kESDanalysis);
	252	hfetrack.SetRecTrack(track);
	253	hfetrack.SetAbInitioPID(abinitioPID);
	254	fPID->SetVarManager(fVarManager);
	255	fPID->IsSelected(&hfetrack, fContainer, "taggedTrackContainer", fPIDqa);
	256	}
3a72645a	257	}
	258
	259	//____________________________________________________________
	260	void AliHFEtaggedTrackAnalysis::SetCuts(AliHFEcuts *cuts){
	261	//
	262	// Set HFE cuts to be used to filter the tagged tracks
	263	//
	264	if(!cuts){
	265	AliWarning("Nob cuts provided - Using standard cuts");
	266	fCuts = new AliHFEcuts("cutsTagged", "HFE Cuts for the V0 tagged tracks");
	267	fCuts->CreateStandardCuts();
	268	fCuts->SetQAOn();
	269	SetBit(kIsOwnerCuts);
bf892a6a	270	} else {
	271	AliDebug(1, "Setting single track cuts");
	272	fCuts = cuts;
3a72645a	273	}
3a72645a	274	const Int_t kNcutSteps = AliHFEcuts::kNcutStepsMCTrack + AliHFEcuts::kNcutStepsRecTrack + AliHFEcuts::kNcutStepsDETrack;
	275	printf("Setting Number of cut steps %d\n", kNcutSteps);
	276	fCFM->SetNStepParticle(kNcutSteps);
	277	for(Int_t istep = 0; istep < kNcutSteps; istep++)
	278	fCFM->SetParticleCutsList(istep, NULL);
	279
	280	fCuts->Initialize(fCFM);
	281	}
	282
	283	//____________________________________________________________
	284	void AliHFEtaggedTrackAnalysis::SetPID(AliHFEpid *pid){
	285	//
	286	// Set the PID and initialize the the QA manager
	287	//
	288	fPID = pid;
	289	fPIDqa->Initialize(fPID);
	290	}
	291
	292	//____________________________________________________________
	293	TList *AliHFEtaggedTrackAnalysis::GetPIDQA() const {
	294	//
	295	// return PID QA
	296	//
	297	return fPIDqa->MakeList("PIDqa_taggedTracks");
	298	}
	299
	300	//____________________________________________________________
	301	TList *AliHFEtaggedTrackAnalysis::GetCutQA() const {
	302	//
	303	// return Cut QA
	304	//
	305	return fCuts->GetQAhistograms();
	306	}
	307
e3ae862b	308