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c683985a 1// run.C
2//
3// Template run macro for AliBasicTask.cxx/.h with example layout of
4// physics selections and options, in macro and task.
5//
6// Author: Arvinder Palaha
7//
8class AliAnalysisGrid;
9class AliAnalysisTaskBF;
10class AliBalance;
11
12//Centrality stuff
13Int_t binfirst = 0; //where do we start numbering bins
14Int_t binlast = 8; //where do we stop numbering bins
15const Int_t numberOfCentralityBins = 9;
16Double_t centralityArray[numberOfCentralityBins+1] = {0.,5.,10.,20.,30.,40.,50.,60.,70.,80.}; // in centrality percentile
17
18//Systematic studies
19const Int_t numberOfSyst = 13;
20Float_t vZ[numberOfSyst] = {10.,12.,6.,8.,10.,10.,10.,10.,10.,10.,10.,10.,10.}; // global Vertex Z cut
21Float_t DCAxy[numberOfSyst] = {-1.,2.4,2.4,2.4,2.2,2.0,1.8,2.4,2.4,2.4,2.4,2.4,2.4}; // DCA xy cut (afterburner, -1 = w/o additional cut)
22Float_t DCAz[numberOfSyst] = {-1.,3.2,3.2,3.2,3.0,2.8,2.6,3.2,3.2,3.2,3.2,3.2,3.2}; // DCA z cut (afterburner, -1 = w/o additional cut)
23Float_t ptMin[numberOfSyst] = {0.3,0.3,0.3,0.3,0.3,0.3,0.3,1.5,5.0,0.3,0.3,0.3,0.3}; // pt cuts
24Float_t ptMax[numberOfSyst] = {5.,1.5,1.5,1.5,1.5,1.5,1.5,5.0,10.0,10.0,1.5,1.5,1.5}; // pt cuts
25Float_t etaMin[numberOfSyst] = {-0.8,-0.8,-0.8,-0.8,-0.8,-0.8,-0.8,-0.8,-0.8,-0.8,-1.0,-0.6,-0.4}; // eta cuts
26Float_t etaMax[numberOfSyst] = {0.8,0.8,0.8,0.8,0.8,0.8,0.8,0.8,0.8,0.8,1.0,0.6,0.4}; // eta cuts
27
28Bool_t kUsePID = kFALSE;
29Bool_t bUseHBTCut = kTRUE;
30Bool_t bUseConversionCut = kTRUE;
31Bool_t bResonancesCut = kTRUE;
32Bool_t bMomentumDifferenceCut = kTRUE;
33Int_t kNSigmaElectronRejection = 3;
34
35//______________________________________________________________________________
36void runBalanceFunctionPsi(
37 const char* runtype = "local", // local, proof or grid
38 const char *gridmode = "test", // Set the run mode (can be "full", "test", "offline", "submit" or "terminate"). Full & Test work for proof
39 const Int_t bunchN = 0,
40 const bool bAOD = 1, // 1 = AOD ANALYSIS, 0 = ESD ANALYSIS
41 const bool bMCtruth = 0, // 1 = MCEvent handler is on (MC truth), 0 = MCEvent handler is off (MC reconstructed/real data)
42 const bool bMCphyssel = 1, // 1 = looking at MC truth or reconstructed, 0 = looking at real data
43 const Long64_t nentries = 50000, // for local and proof mode, ignored in grid mode. Set to 1234567890 for all events.
44 const Long64_t firstentry = 0, // for local and proof mode, ignored in grid mode
45 TString proofdataset = "bunchPROOF", // path to dataset on proof cluster, for proof analysis
46 const char *proofcluster = "miweber@alice-caf.cern.ch", // which proof cluster to use in proof mode
47 const char *taskname = "BF_Syst_Test" // sets name of grid generated macros
48 )
49{
50 // check run type
51 if(runtype != "local" && runtype != "proof" && runtype != "grid") {
52 Printf("\n\tIncorrect run option, check first argument of run macro");
53 Printf("\tint runtype = local, proof or grid\n");
54 return;
55 }
56 Printf("%s analysis chosen",runtype);
57
58 // load libraries
4070f709 59 gSystem->Load("libCore");
60 gSystem->Load("libGeom");
61 gSystem->Load("libVMC");
62 gSystem->Load("libPhysics");
63 gSystem->Load("libTree");
64 gSystem->Load("libSTEERBase");
65 gSystem->Load("libESD");
66 gSystem->Load("libAOD");
67 gSystem->Load("libANALYSIS");
68 gSystem->Load("libANALYSISalice");
69 gSystem->Load("libEventMixing");
70 gSystem->Load("libCORRFW");
71 gSystem->Load("libPWGTools");
72 gSystem->Load("libPWGCFebye");
c683985a 73
74 // additional
75
76 // compile standalone stuff
77 //gROOT->LoadMacro("AliBalance.cxx++g");
78 //gROOT->LoadMacro("AliAnalysisTaskBF.cxx++g");
79
80 // add aliroot indlude path
81 //gROOT->ProcessLine(".include $PWD/.");
82 //gROOT->ProcessLine(Form(".include %s/include",gSystem->ExpandPathName("$ALICE_ROOT")));
83
84 gROOT->SetStyle("Plain");
85
86 // analysis manager
87 AliAnalysisManager* mgr = new AliAnalysisManager(Form("%s%i",taskname,bunchN));
88
89 // create the alien handler and attach it to the manager
90 if(runtype == "grid") {
91 AliAnalysisGrid *plugin = CreateAlienHandler(bAOD,bunchN,Form("%s%i",taskname,bunchN), gridmode, proofcluster, Form("%s_%d.txt",proofdataset.Data(),bunchN));
92 mgr->SetGridHandler(plugin);
93 }
94 else if(runtype == "local") {
95 TString filename;
96 TChain* chain = 0x0;
97 if((!bAOD)&&(!bMCtruth)) {
98 chain = new TChain("esdTree");
99 for(Int_t i = 0; i < 4; i++) {
100 filename = "/data/alice2/pchrist/HeavyIons/Data/2011/Set";
101 filename += i; filename += "/AliESDs.root";
102 chain->Add(filename.Data());
103 }
104 }
105 else if((bAOD)&&(!bMCtruth)) {
106 chain = new TChain("aodTree");
107 for(Int_t i = 1; i < 20; i++) {
108 filename = "/glusterfs/alice1/alice2/pchrist/pp/LHC10c/7TeV/Data/Set";
109 filename += i; filename += "/AliAOD.root";
110 chain->Add(filename.Data());
111 }
112 }
113 else if((!bAOD)&&(bMCtruth)) {
114 chain = new TChain("TE");
115 for(Int_t i = 10; i < 99; i++) {
116 filename = "/project/alice/users/alisrm/Efficiency_Contamination/LHC13b3_HIJING_pA_AOD/";
117 filename += i;
118 filename += "/galice.root";
119 chain->Add(filename.Data());
120 }
121 }
122 else if((bAOD)&&(bMCtruth)) { //used for MCAOD
123 chain = new TChain("aodTree");
124 for(Int_t i = 10; i < 99; i++) {
125 filename = "/project/alice/users/alisrm/Efficiency_Contamination/LHC13b3_HIJING_pA_AOD/";
126 filename += i;
127 filename += "/AliAOD.root";
128 chain->Add(filename.Data());
129 }
130 }
131
132
133 }//local mode
134
135 // input handler (ESD or AOD)
136 AliVEventHandler* inputH = NULL;
137 if(!bAOD){
138 inputH = new AliESDInputHandler();
139 }
140 else{
141 inputH = new AliAODInputHandler();
142 }
143 mgr->SetInputEventHandler(inputH);
144
145 // mc event handler
146 if(bMCtruth) {
147 AliMCEventHandler* mchandler = new AliMCEventHandler();
148 // Not reading track references
149 mchandler->SetReadTR(kFALSE);
150 mgr->SetMCtruthEventHandler(mchandler);
151 }
152
153 // AOD output handler
154 //AliAODHandler* aodoutHandler = new AliAODHandler();
155 //aodoutHandler->SetOutputFileName("aod.root");
156 //mgr->SetOutputEventHandler(aodoutHandler);
157
158 // === Physics Selection Task ===
159 //
160 // In SelectCollisionCandidate(), default is kMB, so the task UserExec()
161 // function is only called for these events.
162 // Options are:
163 // kMB Minimum Bias trigger
164 // kMBNoTRD Minimum bias trigger where the TRD is not read out
165 // kMUON Muon trigger
166 // kHighMult High-Multiplicity Trigger
167 // kUserDefined For manually defined trigger selection
168 //
169 // Multiple options possible with the standard AND/OR operators && and ||
170 // These all have the usual offline SPD or V0 selections performed.
171 //
172 // With a pointer to the physics selection object using physSelTask->GetPhysicsSelection(),
173 // one can manually set the selected and background classes using:
174 // AddCollisionTriggerClass("+CINT1B-ABCE-NOPF-ALL")
175 // AddBGTriggerClass("+CINT1A-ABCE-NOPF-ALL");
176 //
177 // One can also specify multiple classes at once, or require a class to NOT
178 // trigger, for e.g.
179 // AddBGTriggerClass("+CSMBA-ABCE-NOPF-ALL -CSMBB-ABCE-NOPF-ALL");
180 //
181 // NOTE that manually setting the physics selection overrides the standard
182 // selection, so it must be done in completeness.
183 //
184 // ALTERNATIVELY, one can make the physics selection inside the task
185 // UserExec().
186 // For this case, comment out the task->SelectCol.... line,
187 // and see AliBasicTask.cxx UserExec() function for details on this.
188
63b6cbd0 189 //gROOT->LoadMacro("$ALICE_ROOT/OADB/macros/AddTaskPhysicsSelection.C");
c683985a 190 //AliPhysicsSelectionTask *physSelTask = AddTaskPhysicsSelection(bMCphyssel);
191 //if(!physSelTask) { Printf("no physSelTask"); return; }
192 //AliPhysicsSelection *physSel = physSelTask->GetPhysicsSelection();
193 //physSel->AddCollisionTriggerClass("+CINT1B-ABCE-NOPF-ALL");// #3119 #769");
194
195 // create task
196 //Add the centrality determination task and the physics selection
197 // (only on ESD level, in AODs centrality is already in header and events are selected)
198 if((!bAOD)&&(!bMCtruth)){
1c06a186 199 gROOT->LoadMacro("$ALICE_ROOT/OADB/macros/AddTaskCentrality.C");
c683985a 200 AliCentralitySelectionTask *taskCentrality = AddTaskCentrality();
201
202 // Add physics selection task (NOT needed for AODs)
63b6cbd0 203 gROOT->LoadMacro("$ALICE_ROOT/OADB/macros/AddTaskPhysicsSelection.C");
c683985a 204 AliPhysicsSelectionTask* physSelTask = AddTaskPhysicsSelection(bMCphyssel);
205 }
206
207 //Add the PID response
208 if((kUsePID)||(kNSigmaElectronRejection)) {
209 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskPIDResponse.C");
210 AddTaskPIDResponse(bMCphyssel);
211 }
212
213 //Add the VZERO event plane task
214 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskVZEROEPSelection.C");
215 AliVZEROEPSelectionTask* epSelTask = AddTaskVZEROEPSelection();
216
217 //Add the BF task (all centralities)
218 gROOT->LoadMacro("$ALICE_ROOT/PWGCF/EBYE/macros/AddTaskBalancePsiCentralityTrain.C");
219
220 AliAnalysisTaskBFPsi *taskBF = AddTaskBalancePsiCentralityTrain(0, 500, kFALSE, kTRUE, kFALSE, "V0M", 10, -1, -1, 0.2, 20.0, -0.8, 0.8, -1, -1, kUsePID, kFALSE, kTRUE, 0.02, kFALSE, 0.04, kTRUE, 0.1, 128, 1, "AnalysisResults","TE","Multiplicity","AOD",kTRUE, kNSigmaElectronRejection);
221 //taskBF->SetDebugLevel();
222
223 // enable debug printouts
224 //mgr->SetDebugLevel(2);
225 //mgr->SetUseProgressBar(1,100);
226 if (!mgr->InitAnalysis()) return;
227 mgr->PrintStatus();
228
229 // start analysis
230 Printf("Starting Analysis....");
231 if(runtype == "local")
232 mgr->StartAnalysis("local",chain);
233 else
234 mgr->StartAnalysis(runtype,nentries,firstentry);
235}
236
237//______________________________________________________________________________
238AliAnalysisGrid* CreateAlienHandler(Bool_t bAOD, Int_t bunchN, const char *taskname, const char *gridmode, const char *proofcluster, const char *proofdataset)
239{
240 AliAnalysisAlien *plugin = new AliAnalysisAlien();
241 // Set the run mode (can be "full", "test", "offline", "submit" or "terminate")
242 plugin->SetRunMode(gridmode);
243
244 // Set versions of used packages
245 plugin->SetAPIVersion("V1.1x");
246 plugin->SetROOTVersion("v5-28-00d");
247 plugin->SetAliROOTVersion("v5-02-05-AN");
248
249 // Declare input data to be processed.
250
251 // Method 1: Create automatically XML collections using alien 'find' command.
252 // Define production directory LFN
253 plugin->SetGridDataDir("/alice/data/2010/LHC10h/");
254 // On real reconstructed data:
255 // plugin->SetGridDataDir("/alice/data/2009/LHC09d");
256
257 // Set data search pattern
258 //plugin->SetDataPattern("*ESDs.root"); // THIS CHOOSES ALL PASSES
259 // Data pattern for reconstructed data
260 if(!bAOD){
261 plugin->SetDataPattern("*ESDs/pass2/*ESDs.root"); // CHECK LATEST PASS OF DATA SET IN ALIENSH
262 }
263 else{
264 plugin->SetDataPattern("*ESDs/pass2/AOD049/*/AliAOD.root");
265 }
266
267 plugin->SetRunPrefix("000"); // real data
268 // ...then add run numbers to be considered
269 //plugin->SetRunRange(114917,115322);
270
271 if(bunchN==0){
272 plugin->AddRunNumber(137366);
273 }
274
275 //bunch1
276 else if(bunchN == 1){
277 plugin->AddRunNumber(139510);
278 plugin->AddRunNumber(139507);
279 plugin->AddRunNumber(139505);
280 plugin->AddRunNumber(139503);
281 plugin->AddRunNumber(139465);
282 plugin->AddRunNumber(139438);
283 plugin->AddRunNumber(139437);
284 plugin->AddRunNumber(139360);
285 plugin->AddRunNumber(139329);
286 plugin->AddRunNumber(139328);
287 }
288
289 //bunch2
290 else if(bunchN == 2){
291 plugin->AddRunNumber(139314);
292 plugin->AddRunNumber(139310);
293 plugin->AddRunNumber(139309);
294 plugin->AddRunNumber(139173);
295 plugin->AddRunNumber(139107);
296 plugin->AddRunNumber(139105);
297 plugin->AddRunNumber(139038);
298 plugin->AddRunNumber(139037);
299 plugin->AddRunNumber(139036);
300 plugin->AddRunNumber(139029);
301 plugin->AddRunNumber(139028);
302 plugin->AddRunNumber(138872);
303 plugin->AddRunNumber(138871);
304 plugin->AddRunNumber(138870);
305 plugin->AddRunNumber(138837);
306 plugin->AddRunNumber(138732);
307 plugin->AddRunNumber(138730);
308 plugin->AddRunNumber(138666);
309 plugin->AddRunNumber(138662);
310 plugin->AddRunNumber(138653);
311 }
312
313 else if(bunchN == 3){
314 plugin->AddRunNumber(138652);
315 plugin->AddRunNumber(138638);
316 plugin->AddRunNumber(138624);
317 plugin->AddRunNumber(138621);
318 plugin->AddRunNumber(138583);
319 plugin->AddRunNumber(138582);
320 plugin->AddRunNumber(138579);
321 plugin->AddRunNumber(138578);
322 plugin->AddRunNumber(138534);
323 plugin->AddRunNumber(138469);
324 }
325
326 else if(bunchN == 4){
327
328 plugin->AddRunNumber(138442);
329 plugin->AddRunNumber(138439);
330 plugin->AddRunNumber(138438);
331 plugin->AddRunNumber(138396);
332 plugin->AddRunNumber(138364);
333 plugin->AddRunNumber(138275);
334 plugin->AddRunNumber(138225);
335 plugin->AddRunNumber(138201);
336 plugin->AddRunNumber(138197);
337 plugin->AddRunNumber(138192);
338 }
339
340 else if(bunchN == 5){
341
342 plugin->AddRunNumber(138190);
343 plugin->AddRunNumber(137848);
344 plugin->AddRunNumber(137844);
345 plugin->AddRunNumber(137752);
346 plugin->AddRunNumber(137751);
347 plugin->AddRunNumber(137724);
348 plugin->AddRunNumber(137722);
349 plugin->AddRunNumber(137718);
350 plugin->AddRunNumber(137704);
351 plugin->AddRunNumber(137693);
352 }
353
354 else if(bunchN == 6){
355
356 plugin->AddRunNumber(137692);
357 plugin->AddRunNumber(137691);
358 plugin->AddRunNumber(137686);
359 plugin->AddRunNumber(137685);
360 plugin->AddRunNumber(137639);
361 plugin->AddRunNumber(137638);
362 plugin->AddRunNumber(137608);
363 plugin->AddRunNumber(137595);
364 plugin->AddRunNumber(137549);
365 plugin->AddRunNumber(137546);
366
367 }
368
369 else if(bunchN == 7){
370
371 plugin->AddRunNumber(137544);
372 plugin->AddRunNumber(137541);
373 plugin->AddRunNumber(137539);
374 plugin->AddRunNumber(137531);
375 plugin->AddRunNumber(137530);
376 plugin->AddRunNumber(137443);
377 plugin->AddRunNumber(137441);
378 plugin->AddRunNumber(137440);
379 plugin->AddRunNumber(137439);
380 plugin->AddRunNumber(137434);
381
382 }
383
384 else if(bunchN == 8){
385
386 plugin->AddRunNumber(137432);
387 plugin->AddRunNumber(137431);
388 plugin->AddRunNumber(137430);
389 plugin->AddRunNumber(137366);
390 plugin->AddRunNumber(137243);
391 plugin->AddRunNumber(137236);
392 plugin->AddRunNumber(137235);
393 plugin->AddRunNumber(137232);
394 plugin->AddRunNumber(137231);
395 plugin->AddRunNumber(137162);
396 plugin->AddRunNumber(137161);
397 }
398
399 else{
400
401 stderr<<"BUNCH NOT THERE"<<endl;
402 return NULL;
403
404 }
405
406
407 //plugin->AddRunList("139510, 139507, 139505, 139503, 139465, 139438, 139437, 139360, 139329, 139328, 139314, 139310, 139309, 139173, 139107, 139105, 139038, 139037, 139036, 139029, 139028, 138872, 138871, 138870, 138837, 138732, 138730, 138666, 138662, 138653, 138652, 138638, 138624, 138621, 138583, 138582, 138579, 138578, 138534, 138469, 138442, 138439, 138438, 138396, 138364, 138275, 138225, 138201, 138197, 138192, 138190, 137848, 137844, 137752, 137751, 137724, 137722, 137718, 137704, 137693, 137692, 137691, 137686, 137685, 137639, 137638, 137608, 137595, 137549, 137546, 137544, 137541, 137539, 137531, 137530, 137443, 137441, 137440, 137439, 137434, 137432, 137431, 137430, 137366, 137243, 137236, 137235, 137232, 137231, 137162, 137161");
408
409
410
411
412
413 plugin->SetNrunsPerMaster(1);
414 plugin->SetOutputToRunNo();
415 // comment out the next line when using the "terminate" option, unless
416 // you want separate merged files for each run
417 plugin->SetMergeViaJDL();
418
419 // Method 2: Declare existing data files (raw collections, xml collections, root file)
420 // If no path mentioned data is supposed to be in the work directory (see SetGridWorkingDir())
421 // XML collections added via this method can be combined with the first method if
422 // the content is compatible (using or not tags)
423 // plugin->AddDataFile("tag.xml");
424 // plugin->AddDataFile("/alice/data/2008/LHC08c/000057657/raw/Run57657.Merged.RAW.tag.root");
425
426 // Define alien work directory where all files will be copied. Relative to alien $HOME.
427 plugin->SetGridWorkingDir(taskname);
428
429 // Declare alien output directory. Relative to working directory.
430 plugin->SetGridOutputDir("out"); // In this case will be $HOME/taskname/out
431
432 // Declare the analysis source files names separated by blancs. To be compiled runtime
433 // using ACLiC on the worker nodes.
434 plugin->SetAnalysisSource("AliBalance.cxx AliAnalysisTaskBF.cxx");
435
436 // Declare all libraries (other than the default ones for the framework. These will be
437 // loaded by the generated analysis macro. Add all extra files (task .cxx/.h) here.
438 //plugin->AddIncludePath("-I.");
439 //plugin->SetAdditionalLibs("libPWGCFebye.so");
440 plugin->SetAdditionalLibs("AliBalance.cxx AliBalance.h AliAnalysisTaskBF.cxx AliAnalysisTaskBF.h");
441
442 // Declare the output file names separated by blancs.
443 // (can be like: file.root or file.root@ALICE::Niham::File)
444 // To only save certain files, use SetDefaultOutputs(kFALSE), and then
445 // SetOutputFiles("list.root other.filename") to choose which files to save
446 plugin->SetDefaultOutputs();
447 //plugin->SetOutputFiles("list.root");
448
449 // Optionally set a name for the generated analysis macro (default MyAnalysis.C)
450 plugin->SetAnalysisMacro(Form("%s.C",taskname));
451
452 // Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)
453 plugin->SetSplitMaxInputFileNumber(100);
454
455 // Optionally modify the executable name (default analysis.sh)
456 plugin->SetExecutable(Form("%s.sh",taskname));
457
458 // set number of test files to use in "test" mode
459 plugin->SetNtestFiles(1);
460
461 // Optionally resubmit threshold.
462 plugin->SetMasterResubmitThreshold(90);
463
464 // Optionally set time to live (default 30000 sec)
465 plugin->SetTTL(90000);
466
467 // Optionally set input format (default xml-single)
468 plugin->SetInputFormat("xml-single");
469
470 // Optionally modify the name of the generated JDL (default analysis.jdl)
471 plugin->SetJDLName(Form("%s.jdl",taskname));
472
473 // Optionally modify job price (default 1)
474 plugin->SetPrice(1);
475
476 // Optionally modify split mode (default 'se')
477 plugin->SetSplitMode("se");
478
479 //plugin->SetUseSubmitPolicy();
480 //plugin->SetKeepLogs();
481
482 //----------------------------------------------------------
483 //--- PROOF MODE SPECIFIC SETTINGS ------------
484 //----------------------------------------------------------
485 // Proof cluster
486 plugin->SetProofCluster(proofcluster);
487 // Dataset to be used
488 plugin->SetProofDataSet(proofdataset);
489 // May need to reset proof. Supported modes: 0-no reset, 1-soft, 2-hard
490 plugin->SetProofReset(0);
491 // May limit number of workers
492 plugin->SetNproofWorkers(0);
493 // May limit the number of workers per slave
494 plugin->SetNproofWorkersPerSlave(1);
495 // May use a specific version of root installed in proof
496 plugin->SetRootVersionForProof("current");
497 // May set the aliroot mode. Check http://aaf.cern.ch/node/83
498 plugin->SetAliRootMode("default"); // Loads AF libs by default
499 // May request ClearPackages (individual ClearPackage not supported)
500 plugin->SetClearPackages(kFALSE);
501 // Plugin test mode works only providing a file containing test file locations, used in "local" mode also
502 plugin->SetFileForTestMode("files.txt"); // file should contain path name to a local directory containg *ESDs.root etc
503 // Request connection to alien upon connection to grid
504 plugin->SetProofConnectGrid(kFALSE);
505
506 plugin->Print();
507
508 return plugin;
509}
510