+++ /dev/null
-cdABOUT:
-Authors: Jens Wiechula
- Marian Ivanov (marian.ivanov@cern.ch)
-
-Scripts for viusalization and analysis of the TPC OCDB entries and visualization of trends.
-For visualization and analisys purposes root trees and queries on top of trees are used.
-
-Algorithm:
-1. Creation of the run lists. (Expert operation)
-2. Making a calibration trees. (Expert operation)
-3. OCDB visualization analysis. (Non /software/ expert mode)
-
-Requiroments:
-1. AliRoot installed.
-2. Alien installed + valid alien certificate
-3. In some cases (only to speed up tree creation process) the batch farm can be used.
-
-----------
-Quickstart
------------
-
-Without thinking, you can do the following to create a tree with calibration entries.
-The default settings should work, however you might want to change them for 'better'
-performance.
-
-Do the following:
-1. Setup environment
- 1.a) gui dependend variables
- export SCRIPTDIR=$ALICE_ROOT/TPC/scripts
- export PATH=$SCRIPTDIR:$PATH
- source $ALICE_ROOT/TPC/scripts/guiEnv.sh
- 1.b) Modify your guiEnv.sh script in $SCRIPTDIR
- 1.c) Run: source guiEnv.sh debug
- 1.d) Check the output of script. All checks has to be OK.
-
-2. Run tree creation (Jens Wiechula scripts) Options:
- 2.a) Run on a list of run numbers with name 'list.txt', one run number per line
- makeCalibTree -l list.txt
- 2.b) Run on a range of run numbers:
- makeCalibTree -r 75000-80000
- 2.c) Run automatic tree creation for all runs in the
- data taking period which was set up (see below)
- !!!WARNING!!! this will take quite some time
- makeCalibTree -a
-
-3. Run tree creation for extended statistic. This part can be run only if batchcommand specified. (Marian Ivanov part of scripts)
- WARNING this is just example usage of expert mode:
- bgroup=/bgui
- ifirst=79000
- ilast=102000
- step=250
- runList=`pwd`/run.list
- bgadd $bgroup
- for (( startRun=$ifirst; startRun<$ilast; startRun=startRun+$step )) ; do
- let endRun=$startRun+$step
- echo $startRun $endRun
- echo $BATCHCOMMAND -g $bgroup -oo $GUI_OUTDIR/logs/out$startRun.log -eo $GUI_OUTDIR/logs/err$startRun.log makeCalibTree.sh $runList $startRun $endRun;
- $BATCHCOMMAND -g $bgroup -oo $GUI_OUTDIR/logs/out$startRun.log -eo $GUI_OUTDIR/logs/err$startRun.log makeCalibTree.sh $runList $startRun $endRun;
- done;
-
-4. Start the GUI browser. This should work always (even on your laptop).
-guiTime
-
-
-
--------------------
-General information
--------------------
-The macros and shell scripts used are stored in $ALICE_ROOT/TPC/CalibMacros/guiTime
-If you would like to modify some setting (see below), but do not have write access to this
-directory, you can copy the complete directory somewhere else and setup the environment
-variables accordingly:
-
-export SCRIPTDIR=path_to_my_directory
-export PATH=$SCRIPTDIR:$PATH
-
-- setup scripts
-All user relevant setup is done the shell script 'guiEnv' and the root macro 'ConfigOCDB.C'
-All other files don't need to be modified by the user.
-
-- scripts for the tree creation:
-makeCalibTree: Steering script to launch the tree creation
-makeCalibTreeList: script running the actual root process to create the tree
-
-- scripts to start the gui:
-gui 'filename': Start the CalibViewerGUI using the tree in file 'filename'. Invokes the script
- startGUI.C
-guiTime ['filename']: Start the CalibViewerGUItime. Optionally a filename containing the calibration
- calibration tree can be specified. Otherwise the trees from the directory setup
- in guiEnv will be used (see below). Invokes the script startGUItime.C
-
--oter scripts:
-loadlibsREC.C: Root macro to load only libraries needed to start the gui and tree creation.
-
-
-----------------
-Customised setup
-----------------
-
-- Defining the OCDB directories (ConfigOCDB.C):
-Before starting the tree creation or gui the macro 'ConfigOCDB.C' is exectued. This macro should contain
-all the setup needed to point to the proper OCDB directories. If alien is used, alien needs also to be
-setup in the macro. Open the macro for examples.
-
-- General output information (guiEnv):
-In the 'guiEnv' script environment variables defining default output directories etc. See comments in the
-file for explanations.
-
-
-Troubleshouting:
-
-1. Check your environment.
- source guiEnv.sh debug
- 1.a) If not execuitng check your $PATH
- 1.b) Check the output of script. All checks should be indicated OK.
-2. Modify environment if neccessary
-3. Missing ConfigOCDB.C macro. This macro is not provided by default.
- It is setup specific. You should contact experts to get it.
-4. Wrong ConfigOCDB.C macro, tests:
- 4.a) ls $SCRIPTDIR/ConfigOCDB.C - file should exist
- 4.b) run ConfigOCDB.C macro in aliroot session. Check the output.
-
-In case of further problems, please inform authors.
\ No newline at end of file
+++ /dev/null
-#!/bin/bash
-if [ $# -ne 1 ]; then
- echo one file neede das input!
- exit 1
-fi
-if [ "x$SCRIPTDIR" == "x" ]; then
- echo
- echo please run:
- echo export SCRIPTDIR=whatever_is_your_path
- echo
- exit 1
-fi
-source $SCRIPTDIR/guiEnv.sh
-root.exe $SCRIPTDIR/loadlibsREC.C $SCRIPTDIR/startGUI.C\(\"$1\"\)
+++ /dev/null
-#
-# setup aliroot environment
-# to be modified by users
-# This is example setup which is used at GSI
-# In order to use it on your laptop
-# AliRoot, Destination directories and the AUTOFILES has to be modified
-# (Jens Wiechula, Marian Ivanov)
-#
-#
-# parameters
-# 1 - debug flag
-
-#
-# set your aliroot and alien environment
-#
-source $HOME/.balice
-echo YOU HAVE TO MODIFY ALIROOT SETUP
-echo IT IS ENVIRNMENT SPECIFIC
-#
-#output directory
-#
-export GUI_OUTDIR=/lustre/alice/TPCgui
-echo YOU HAVE TO MODIFY DESTINATION DIRECTORY
-echo IT IS ENVIRONMENT SPECIFIC
-
-#usually the next two can stay as they are. If you are not happy with where the output is written
-#feel free to change them
-export GUI_OUTDIR_TIME=$GUI_OUTDIR/time
-export GUI_OUTDIR_RUNS=$GUI_OUTDIR/runs
-
-#command for batch processing
-# see also TMPLISTDIR!!!
-export BATCHCOMMAND="bsub -q alice-t3_8h"
-
-#directory for the temporary list files
-#for batch processing this dir needs to be accessable from the batch nodes!!!
-export TMPLISTDIR=$GUI_OUTDIR/guiTreeLists
-
-#path to reference tree. Consider to use one!
-#see README to understand how to create them
-export REF_DATA_FILE=$GUI_OUTDIR/ref/RefCalPads.root
-export REF_DATA_TREE=$GUI_OUTDIR/ref/RefTree.root
-
-#whether alien path is used in OCDB
-#export WITHALIEN=1
-export WITHALIEN=0
-
-#where to look for files in automatic tree creation
-#it assumes a path to an OCDB directory and uses the
-#run numbers of the file names:
-#Run([0-9]{5})_.*
-export AUTOFILES=/lustre/alice/alien/alice/data/2009/OCDB/TPC/Calib/HighVoltage
-echo YOU HAVE TO MODIFY AUTOFILES DIRECTORY
-echo IT IS ENVIRONMENT SPECIFIC
-
-#number of files per chunk in automatic tree creation
-export NFILES=25
-
-if [ -z $1 ]; then
- return 0;
-fi;
-
-echo Test guiEnv setup
-
-errorCode=0;
-goodPass=0;
-testROOT=`which root`
-if [ -z testROOT ]; then
- echo Check root setup" ":FALSE
- let errorCode=errorCode+1
- else
- echo Check root setup" ":OK" "- $testROOT
-fi;
-#
-# test GUIdir
-#
-if [ -d $GUI_OUTDIR ]; then
- echo Check GUI_OUTDIR" ":OK" "- $GUI_OUTDIR
- else
- echo Check GUI_OUTDIR" ":FALSE"" - $GUI_OUTDIR
- let errorCode=errorCode+2
-fi;
-#
-#
-#
-if [ -r $GUI_OUTDIR_TIME ]; then
- echo Check GUI_OUTDIR_TIME" ":OK" "- $GUI_OUTDIR_TIME
- else
- echo Check GUI_OUTDIR_TIME" ":FALSE" "- Does not exist or not readable
- let errorCode=errorCode+4
-fi;
-
-if [ -r $GUI_OUTDIR_RUNS ]; then
- echo Check GUI_OUTDIR_RUNS" ":OK" "- $GUI_OUTDIR_RUNS
- else
- echo Check GUI_OUTDIR_RUNS" ":FALSE" "- Does not exist or not readable
- let errorCode=errorCode+8
-fi;
-
-if [ -r $GUI_OUTDIR/guiTreeLists ]; then
- echo Check GUI_OUTDIR/guiTreeLists" ":OK" "- $GUI_OUTDIR/guiTreeLists
- else
- echo Check GUI_OUTDIR/guiTreeLists" ":FALSE" "- Does not exist or not readable
- let errorCode=errorCode+16
-fi;
-
-if [ -z `which aliensh` -a WITHALIEN!=0 ]; then
- echo Alien not properly initialized
- let errorCode=errorCode+32
-fi;
-
-
-echo $errorCode
-return $errorCode
+++ /dev/null
-#!/bin/bash
-if [ "x$SCRIPTDIR" == "x" ]; then
- echo
- echo please run:
- echo export SCRIPTDIR=whatever is you path
- echo
- exit 1
-fi
-source $SCRIPTDIR/guiEnv.sh
-test -d $GUI_OUTDIR_RUNS || mkdir -p $GUI_OUTDIR_RUNS
-root.exe $SCRIPTDIR/loadlibsREC.C $SCRIPTDIR/ConfigOCDB.C $SCRIPTDIR/startGUItime.C\(\"$1\"\) $ALICE_ROOT/TPC/CalibMacros/guiAlias.C
+++ /dev/null
-# Aruments
-# 1 - run list
-# 2 - start run
-# 3 - end run
-
-runList=$1
-startRun=$2
-endRun=$3
-echo runList=$runList
-echo startRun=$startRun
-echo endRun=$endRun
-#
-workdir=${GUI_OUTDIR}/tmp/tmp${startRun}-${endRun}
-backupdir=`pwd`/
-mkdirhier $workdir
-cd $workdir
-source guiEnv.sh
-source halloWorld.sh
-#
-aliroot -q -b $SCRIPTDIR/ConfigOCDB.C $ALICE_ROOT/TPC/CalibMacros/CalibEnv.C+\(\"$runList\",$startRun,$endRun\)
-cp dcsTime.root $GUI_OUTDIR/time/calibTreeTime_$startRun_$endRun.root
-cd $backupdir
+++ /dev/null
-#!/bin/bash
-
-#parameters
-#1: listfile
-#2: outfile
-#3: bindir
-
-. $3/guiEnv.sh
-
-#temporary working directory
-dirID=/tmp/$(whoami)/$(date +%F.%H.%M.%S.%N)_$(basename $1)
-
-test -d $dirID || mkdir -p $dirID
-cd $dirID
-root.exe -q -b $3/loadlibsREC.C $3/ConfigOCDB.C $ALICE_ROOT/TPC/CalibMacros/CalibEnv.C+\(\"$1\"\)
-mv dcsTime.root $2
-rmdir $dirID
git://git.uio.no / u / mrichter / AliRoot.git / commitdiff