also on a batch farm encode spaces to avoid problems parsing arguments

which contain them

diff --git a/PWGPP/benchmark/benchmark.sh b/PWGPP/benchmark/benchmark.sh
index 74da32b4fc3426e03d7bff8f7817b5f5524d57b4..b1100648f06729ac4a70e6e25bbf9dca05ce95bd 100755 (executable)
--- a/PWGPP/benchmark/benchmark.sh
+++ b/PWGPP/benchmark/benchmark.sh
@@ -1513,6 +1513,12 @@ goSubmitBatch()
   extraOpts=("$@")
   if ! parseConfig ${configFile} "${extraOpts[@]}"; then return 1; fi
   
+  #batch systems/makeflow sometimes handle spaces in arguments poorly, so encode them
+  for (( i=0;i<${#extraOpts[@]};i++ )); do 
+    extraOpts[i]=$(encSpaces "${extraOpts[i]}")
+  done
+  extraOpts+=("encodedSpaces=1")
+
   #record the working directory provided by the batch system
   batchWorkingDirectory=${PWD}