--- /dev/null
+
+Executable="/alice/cern.ch/user/s/srossegg/bin/runCalibSummary.sh";
+
+Packages = "VO_ALICE@AliRoot::v4-19-19-AN";
+
+JDLVariables={"Packages", "OutputDir"};
+
+TTL = "7200";
+Price = 1;
+
+Validationcommand ="/alice/cern.ch/user/s/srossegg/CalibSummary/validation.sh";
+
+Arguments = "$1";
+
+InputFile={"LF:/alice/cern.ch/user/s/srossegg/CalibSummary/runCalibSummary.C",
+ "LF:/alice/cern.ch/user/s/srossegg/CalibSummary/ConfigOCDB.C"
+};
+
+OutputDir="/alice/cern.ch/user/s/srossegg/CalibSummary/output/$1/";
+
+OutputFile = {"*.root"};
+
+OutputArchive={"log_archive:*.log@disk=1",
+ "root_archive.zip:*.root,@disk=1"};
--- /dev/null
+//
+// Macro to Setup OCDB for calibration scan
+// By default - all entries taken from the AliEn OCDB storage
+// This is just example macro
+// Responsible: marian.ivanov@cern.ch
+
+
+
+void ConfigOCDB(Int_t run=-1){
+ //
+ printf("SETUP OCBD for TPC\n");
+ //
+ AliCDBManager::Instance()->SetDefaultStorage("raw://");
+
+ printf("setting run to %d\n",run);
+ if (run<0) run =0;
+ AliCDBManager::Instance()->SetRun(run);
+
+ // magnetic field
+ if ( !TGeoGlobalMagField::Instance()->GetField() ) {
+ printf("Loading field map...\n");
+ AliGRPManager grpMan;
+ if( !grpMan.ReadGRPEntry() ) {
+ printf("Cannot get GRP entry\n");
+ }
+ if( !grpMan.SetMagField() ) {
+ printf("Problem with magnetic field setup\n");
+ }
+ }
+ if ( !TGeoGlobalMagField::Instance()->GetField()){
+ AliMagF::BMap_t smag = AliMagF::k5kG;
+ Double_t bzfac = 1;
+ AliMagF* magF= new AliMagF("Maps","Maps", bzfac, 1., smag);
+ TGeoGlobalMagField::Instance()->SetField(magF);
+ }
+
+ AliTPCcalibDB::Instance()->SetRun(run);
+}
+
+
+
--- /dev/null
+NOTE: for all the steps, you need a valid alien certificate (obviously ;-) )
+alien-token-init
+source /tmp/gclient_env_$USERID
+
+
++++++++ STEP 1 +++++++++++++
+
+Create a run.list file which contains the run number in which you
+are interested in:
+
+see for example: $ALICE_ROOT/TPC/scripts/OCDBscan/makeRunList.sh
+
+####################
+#!/bin/sh
+# find a list of runs which have the following OCDB entries
+# GRP, HV, ALTRO
+
+prefix=/alice/data/2010/OCDB/
+
+alien_find $prefix/GRP/GRP/Data Run > grpAlien.txt
+alien_find $prefix/TPC/Calib/HighVoltage Run > hvAlien.txt
+alien_find $prefix/TPC/Calib/AltroConfig Run > altroAlien.txt
+
+cat grpAlien.txt | sed s/_/\ /g | gawk '{ print $2}' | sort > grp.txt
+cat hvAlien.txt | sed s/_/\ /g | gawk '{ print $2}' | sort > hv.txt
+cat altroAlien.txt | sed s/_/\ /g | gawk '{ print $2}' | sort > altro.txt
+
+for run in `cat hv.txt | sort`; do
+ grun=`cat grp.txt | grep -c $run`
+ arun=`cat altro.txt | grep -c $run`
+ if [ $grun -gt 0 ] && [ $arun -gt 0 ]; then
+ echo $run
+ fi
+done > runList.txt
+# clean up
+rm grpAlien.txt hvAlien.txt altroAlien.txt grp.txt hv.txt altro.txt
+
+###################
+
++++++++ STEP 2 +++++++++++++
+
+Submit the alienjobs (one job per run)
+but skip already existing entries ...
+Note1: PATHtoOUTPUT is usually defined in your jdl!
+
+Note2: check your job status with e.g. `alien_ps`
+
+
+####################
+#!/bin/sh
+# submit an alienjob per entry in the runList.txt
+
+PATHtoOUTPUT="/alice/cern.ch/user/s/srossegg/CalibSummary/output/"
+
+for RUN in `cat runList.txt`; do
+alien_find $PATHtoOUTPUT run$RUN
+ entry=`alien_find $PATHtoOUTPUT run$RUN`
+ if [ "$entry" = "" ]
+ then
+ echo "Submitting job to produce the calib summary for run $RUN"
+ alien_submit CalibSummary.jdl $RUN
+ else
+ echo "The calib summary for run $RUN was already created! Skipping entry ..."
+ fi
+
+done;
+
+###################
+
++++++++ STEP 3 +++++++++++++
+
+print a list of all the produced calibSummary entries and copy them to
+a local directory (if wished)
+
+###################
+#!/bin/sh
+# list and copy the created calibSummary files ...
+
+PATHtoOUTPUT="/alice/cern.ch/user/s/srossegg/CalibSummary/output/"
+alien_find $PATHtoOUTPUT calibSum
+
+# copy them to one direcotory
+ENTRIES=`alien_find $PATHtoOUTPUT calibSum | grep calibSum`
+COPYPATH="./"
+for ENTRY in $ENTRIES; do
+ alien_cp alien:$ENTRY $COPYPATH
+done;
+
+##### don't do the following if you are not sure #######
+
+# or delete the entries on alien
+ENTRIES=`alien_find $PATHtoOUTPUT calibSum | grep calibSum`
+for ENTRY in $ENTRIES; do
+ alien_erase $ENTRY
+done;
+
+###################
--- /dev/null
+/*
+
+ runCalibSummary.C
+ Macro to extract TPC calibration summary information
+
+ Example:
+ .L runCalibSummary.C
+ runCalibSummary(119037);
+
+*/
+
+void runCalibSummary(TString runNumberString ="0")
+{
+
+ Int_t irun = runNumberString.Atoi();
+
+ // Load libraries
+ gSystem->Load("libANALYSIS");
+ gSystem->Load("libTPCcalib");
+
+ // Configure OCDB
+ gROOT->LoadMacro("ConfigOCDB.C");
+ ConfigOCDB(irun);
+
+ // run extraction of the calibration summary ...
+ AliTPCcalibSummary *calibSummary = new AliTPCcalibSummary;
+ calibSummary->ProcessRun(irun);
+ delete calibSummary;
+
+ return;
+}
--- /dev/null
+#!/bin/bash
+
+# Script to run Calibration Summary Extraction for the TPC :
+# Arguments:
+# 1 - run number
+
+# example:
+# runCalibSummary.sh 119037
+
+runnum=$1
+
+echo
+echo Run number to be processed $runnum
+echo
+export GCLIENT_SERVER_LIST="pcapiserv04.cern.ch:10000|pcapiserv05.cern.ch:10000|pcapiserv06.cern.ch:10000|pcapiserv07.cern.ch:10000"
+echo ===========================
+echo ">>>>>>>>> PATH is..."
+echo $PATH
+echo ">>>>>>>>> ROOTSYS is..."
+echo $ROOTSYS
+echo ">>>>>>>>> LD_LIBRARY_PATH is..."
+echo $LD_LIBRARY_PATH
+echo ==========================
+echo
+
+echo ">>>>>>> Running AliRoot to extract calibration summary..."
+aliroot -l -b -q ./runCalibSummary.C\(\"$runnum\"\) 2>&1 | tee calib.log
+
+if [ -f dcsTime.log ]
+ then
+ mv dcsTime.root calibSummary_run$runnum.root
+else
+ echo
+ echo "dcsTime.root file was not created - job failure"
+fi
--- /dev/null
+#!/bin/sh
+##################################################
+validateout=`dirname $0`
+validatetime=`date`
+validated="0";
+error=1
+
+if [ -z $validateout ]
+then
+ validateout="."
+fi
+cd $validateout;
+validateworkdir=`pwd`;
+
+echo "*******************************************************" >> stdout;
+echo "* AliRoot Validation Script V1.0 *" >> stdout;
+echo "* Time: $validatetime " >> stdout;
+echo "* Dir: $validateout" >> stdout;
+echo "* Workdir: $validateworkdir" >> stdout;
+echo "* ----------------------------------------------------*" >> stdout;
+ls -la ./ >> stdout;
+echo "* ----------------------------------------------------*" >> stdout;
+
+##################################################
+
+echo "... testing if the suppossed output was created ">> stdout
+if [ -f calib.log ] && [ -f calib*.root ]
+ then
+ echo "ok">> stdout
+ echo "... testing for Segmentation violation">> stdout
+ sv=`grep -i "Segmentation violation" *.log`
+ if [ "$sv" = "" ]
+ then
+ echo "ok">> stdout
+ echo "... testing for Segmentation fault">> stdout
+ sf=`grep -i "Segmentation fault" *.log`
+ if [ "$sf" = "" ]
+ then
+ echo "ok">> stdout
+ echo "... testing for Bus error">> stdout
+ be=`grep -i "Bus error" *.log`
+ if [ "$be" = "" ]
+ then
+ echo "ok">> stdout
+ echo "... testing for Break">> stdout
+ ab=`grep -i "Break" *.log`
+ if [ "$ab" = "" ]
+ then
+ echo "ok">> stdout
+ echo "... testing for Floating point exception">> stdout
+ fp=`grep -i "Floating point exception" *.log`
+ if [ "$fp" = "" ]
+ then
+ echo "ok">> stdout
+ echo "... testing for Killed">> stdout
+ kl=`grep -i "Killed" *.log`
+ if [ "$kl" = "" ]
+ then
+ echo "ok">> stdout
+ echo "... testing for busy flag cleared">> stdout
+ bf=`grep -i "busy flag cleared" *.log`
+ if [ "$bf" = "" ]
+ then
+ echo "* ---------------- Job Validated ------------------*" >> stdout;
+ error="0";
+ else
+ echo "* # Check Macro failed ! #" >> stdout;
+ fi
+ fi
+ fi
+ fi
+ fi
+ fi
+ fi
+else
+ echo "* ########## Job not validated - no calib.log or calibSummary.root ###" >> stdout;
+ echo "* ########## Removing all ROOT files from the local directory, leaving only the logs ###" >> stdout;
+ rm -rf *.root
+fi
+
+
+if [ "$error" = "1" ]
+ then
+ echo "* ################ Job not validated ################" >> stdout;
+fi
+
+
+echo "* ----------------------------------------------------*" >> stdout;
+echo "*******************************************************" >> stdout;
+
+
+sleep 15;
+cd -
+
+cp stdout stdout.log
+if [ -f stderr ]
+ then
+ cp stderr stderr.log
+fi
+
+exit $error
git://git.uio.no / u / mrichter / AliRoot.git / commitdiff