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fixed running with PtQAMC
[u/mrichter/AliRoot.git] / PWG4 / macros / AnalysisTrainPWG4Jets.C
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c38e3b95 1//===================== ANALYSIS TRAIN =========================================
2// To use: copy this macro to your work directory, modify the global part to match
3// your needs, then run root.
4// root[0] .L AnalysisTrain.C
5// Grid full mode as below (other modes: test, offline, submit, terminate)
121e4bd5 6// root[1] AnalysisTrainPWG-244Jets("grid", "full")
c38e3b95 7// CAF mode (requires root v5-23-02 + aliroot v4-16-Rev08)
8// root[2] AnalysisTrainPWG4Jets("proof")
9// Local mode requires AliESds.root or AliAOD.root in ./data directory
10// root[3] AnalysisTrainPWG4Jets("local")
11// In proof and grid modes, a token is needed and sourcing the produced environment file.
12//
13// If 'saveTrain' flag is set, the train will generate a directory name and run
14// in this directory. A configuration file 'ConfigTrain.C' will be generated.
15// One can replay at any time the train via:
16// root[1] AnalysisTrainPWG4Jets(ana_mode, plugin_mode, "train_default_<date>/ConfigTrain.C")
17
18// For Usage with fastjet run in "offline" first and then "submit"
19// jdl and analysismacro are automatically patched after "offline" mode
20
21// =============================================================================
22// ### General Steering variables
23// =============================================================================
24//== general setup variables
25TString kTrainName = "testAnalysis"; // *CHANGE ME* (no blancs or special characters)
26TString kJobTag = "PWG4 Jet Tasks analysis train configured"; // *CHANGE ME*
27
28// Usage of par files ONLY in grid mode and ONLY if the code is not available
29// in the deployed AliRoot versions. Par file search path: local dir, if not there $ALICE_ROOT.
30// To refresh par files, remove the ones in the workdir, then do "make <target.par>" in
31// AliRoot.
32Bool_t kUsePAR = kFALSE; // use par files for extra libs
33Bool_t kUseCPAR = kFALSE; // use par files for common libs
34Bool_t kFillAOD = kFALSE; // switch of AOD filling for on the fly analysis
4721d8c5 35Int_t kSaveAOD = 8; // Bit switch 1 = Full AOD 2 = Jet AOD , 4 = PartCorr, 8 = JCORRAN
c38e3b95 36//== general input and output variables
9a5c5b1e 37
c38e3b95 38Int_t iAODanalysis = 1; // Analysis on input AOD's
39Int_t iAODhandler = 1; // Analysis produces an AOD or dAOD's
40Int_t iESDfilter = 0; // ESD to AOD filter (barrel + muon tracks)
e84da0a5 41Int_t iPhysicsSelection = 1; // ESD to AOD filter (barrel + muon tracks)
c38e3b95 42Bool_t kUseKinefilter = kFALSE; // use Kinematics filter
43Bool_t kUseMuonfilter = kFALSE; // use Kinematics filter
44TString kCommonOutputFileName = "PWG4_JetTasksOutput.root";
9748e967 45TString kCaloQAOutputFileName = "PWG4_CaloQAOutput.root";
c38e3b95 46
47
48//== general process variables
49
50// ### Other flags to steer the analysis
51//==============================================================================
9a5c5b1e 52Bool_t kSkipTerminate = kTRUE; // Do not call Teminate
c38e3b95 53Bool_t kUseDate = kFALSE; // use date in train name
54Bool_t kUseDebug = kTRUE; // activate debugging
46534866 55Int_t kErrorIgnoreLevel = -1; // takes the errror print level from .rootrc
56// From TError.h:
57// const Int_t kUnset = -1;
58// const Int_t kPrint = 0;
59// const Int_t kInfo = 1000;
60// const Int_t kWarning = 2000;
61// const Int_t kError = 3000;
62// const Int_t kBreak = 4000;
63// const Int_t kSysError = 5000;
64// const Int_t kFatal = 6000;
65Int_t kUseSysInfo = 0; // activate debugging
ebad39a9 66Long64_t kNumberOfEvents = 1234567890; // number of events to process from the chain
c38e3b95 67Bool_t kUseMC = kTRUE; // use MC info
68Bool_t kIsMC = kTRUE; // is MC info, if false it overwrites Use(AOD)MC
69Bool_t kUseAODMC = kTRUE; // use MC infA
70Bool_t kUseESDTags = kFALSE; // use ESD tags for selection
71Bool_t kUseTR = kFALSE; // use track references
72Bool_t kUseAODTags = kFALSE; // use AOD tags
73Bool_t kSaveTrain = kFALSE; // save train configuration as:
74
9a5c5b1e 75
c38e3b95 76// ### Analysis modules to be included. Some may not be yet fully implemented.
77//==============================================================================
78Int_t iJETAN = 1; // Jet analysis (PWG4) // 1 write standard 2 write non-standard jets, 3 wrtie both
79Int_t iDIJETAN = 1;
e6993a52 80Int_t iJETANLib = 1;
c38e3b95 81Int_t iPWG1QASym = 0; // Eva's QA task compiled on the fly...
82Int_t iPWG4JetTasks = 0; // all jet tasks flag for lib laoding
83Int_t iPWG4JetServices = 0; // jet spectrum analysis
84Int_t iPWG4JetSpectrum = 0; // jet spectrum analysis
58ef946c 85Int_t iPWG4JCORRAN = 0; // JCORRAN module
c38e3b95 86Int_t iPWG4UE = 0; // Underlying Event analysis
e0c120d9 87Int_t iPWG4LeadingUE = 0; // Underlying Event analysis
88Int_t iPWG4CorrectionsUE = 0; // Underlying Event analysis
c166d299 89Int_t iPWG4TmpSourceSara = 0; // Underlying Event analysis not in svn
aba42fcb 90Int_t iPWG4Fragmentation = 0; // Official Fragmentation
9f77f0ce 91Int_t iPWG4JetChem = 0; // Jet chemistry
c38e3b95 92Int_t iPWG4PtQAMC = 0; // Marta's QA tasks
93Int_t iPWG4PtSpectra = 0; // Marta's QA tasks
94Int_t iPWG4PtQATPC = 0; // Marta's QA tasks
4721d8c5 95Int_t iPWG4Cosmics = 0; // Marta's Cosmics Taks
c38e3b95 96Int_t iPWG4ThreeJets = 0; // Sona's thrust task
b53f2e4f 97Int_t iPWG4KMeans = 0; // Andreas' KMeans task
d2e6cdd5 98Int_t iPWG4Cluster = 0; // CKB cluster task
4721d8c5 99Int_t iEMCUtilLibs = 0; // Flag to satisfy dependence on EMC utils
911a740f 100Int_t iPWG4PartCorrLibs = 0; // Gustavo's part corr analysis
c38e3b95 101Int_t iPWG4PartCorr = 0; // Gustavo's part corr analysis
d2e6cdd5 102Int_t iPWG4CaloQA = 0; // Gustavo's part corr analysis
103Int_t iPWG4JetCorr = 0; // Paul's jet corr analysis
911a740f 104Int_t iPWG4Tagged = 0; // Gustavo's part corr analysis
121e4bd5 105Int_t iPWG4omega3pi = 0; // Omega to 3 pi analysis (PWG4)
17d96675 106Int_t iPWG4GammaConvLib = 0; // Gamma Conversio
53c63663 107Int_t iPWG4GammaConv = 0; // Gamma Conversio
17d96675 108Int_t iPWG4CaloConv = 0; // Gamma Conversio
c38e3b95 109Int_t kHighPtFilterMask = 16; // change depending on the used AOD Filter
e6993a52 110TString kDeltaAODJetName = "AliAOD.Jets.root";
4721d8c5 111TString kDeltaAODJCORRANName = "AliAOD.JCORRAN.root";
53c63663 112TString kDeltaAODPartCorrName = "deltaAODPartCorr.root";
c38e3b95 113
114
115//==============================================================================
116// ### PROOF Steering varibales
117//==============================================================================
118//== proof setup variables
119TString kProofCluster = "alicecaf.cern.ch";
120Bool_t kProofUseAFPAR = kFALSE; // use AF special par file
121TString kProofAFversion = "AF-v4-17";
122//== proof input and output variables
123TString kProofDataSet = "/COMMON/COMMON/LHC09a4_run8100X#/esdTree";
124Bool_t kProofSaveToAlien = kFALSE; // save proof outputs in AliEn train_[trainName]_ddMonthyyyy_time.C
125TString kProofOutdir = "";
126Bool_t kProofClearPackages = kFALSE;
127Int_t kProofEvents = 10000;
128Int_t kProofOffset = 0;
129//== proof process variables
130
131
132//==============================================================================
133// ### Grid plugin Steering varibiables
134//==============================================================================
135//== grid plugin setup variables
136Bool_t kPluginUse = kTRUE; // do not change
137Bool_t kPluginUseProductionMode = kFALSE; // use the plugin in production mode
c8fb37dd 138TString kPluginRootVersion = "v5-27-05"; // *CHANGE ME IF MORE RECENT IN GRID*
d3af0232 139TString kPluginAliRootVersion = "v4-19-15-AN"; // *CHANGE ME IF MORE RECENT IN GRID*
9a5c5b1e 140Bool_t kPluginMergeViaJDL = kTRUE; // merge via JDL
141Bool_t kPluginFastReadOption = kFALSE; // use xrootd tweaks
142Bool_t kPluginOverwriteMode = kTRUE; // overwrite existing collections
dc6a7461 143Int_t kPluginOutputToRunNumber = 1; // write the output to subdirs named after run number
c38e3b95 144// TString kPluginExecutableCommand = "root -b -q";
145TString kPluginExecutableCommand = "source /Users/kleinb/setup_32bit_aliroot_trunk_clean_root_trunk.sh; alienroot -b -q ";
9a5c5b1e 146
c38e3b95 147// == grid plugin input and output variables
148TString kGridDatadir = "/alice/sim/PDC_08b/LHC09a1/AOD/";
9748e967 149Int_t kGridMaxRunsFromList = 999999999;
c38e3b95 150TString kGridLocalRunList = "";
151TString kGridOutdir = ""; // AliEn output directory. If blank will become output_<kTrainName>
3878a941 152TString kGridDataSet = ""; // sub working directory not to confuse different run xmls
9748e967 153Int_t kGridRunRange[2] = {0, -1}; // Set the run range
c38e3b95 154TString kGridRunPattern = "%03d"; // important for leading zeroes!!
155TString kGridPassPattern = "";
156TString kGridExtraFiles = ""; // files that will be added to the input list in the JDL...
9748e967 157Int_t kGridMaxMergeFiles = 12; // Number of files merged in a chunk grid run range
c38e3b95 158TString kGridMergeExclude = "AliAOD.root"; // Files that should not be merged
6408fe42 159TString kGridOutputStorages = "disk=2"; // Make replicas on the storages
c38e3b95 160// == grid process variables
c28abe00 161Int_t kGridRunsPerMaster = 100; // Number of runs per master job
e84da0a5 162Int_t kGridFilesPerJob = 100; // Maximum number of files per job (gives size of AOD)
c38e3b95 163
164//==============================================================================
165// ### Local Steering variables
166//==============================================================================
167//== local setup variables
168//== local input and output variables
169TString kLocalXMLDataset = ""; // Change local xml dataset for local interactive analysis
170TString kLocalDataList = "local_deltaaod.txt"; // Change local xml dataset for local interactive analysis
171// == local process variables
172
173
174
175// Temporaries.
176TString anaPars = "";
177TString anaLibs = "";
e84da0a5 178TString anaLibsExtra = "";
c38e3b95 179TString anaSources = "";
180// Function signatures
181class AliAnalysisAlien;
182
183//______________________________________________________________________________
184void AnalysisTrainPWG4Jets(const char *analysis_mode="local",
185 const char *plugin_mode="",
186 const char *config_file="",Int_t iOffset = 0)
187{
188// Main analysis train macro. If a configuration file is provided, all parameters
189// are taken from there but may be altered by CheckModuleFlags.
3878a941 190
c38e3b95 191 if (strlen(config_file) && !LoadConfig(config_file)) return;
3878a941 192
c38e3b95 193 if(iOffset)kProofOffset = iOffset;
194 TString smode(analysis_mode);
195 smode.ToUpper();
196 if (kSaveTrain)WriteConfig();
197 // Check compatibility of selected modules
198 CheckModuleFlags(smode);
ebad39a9 199 // gROOT->ProcessLine(".trace");
c38e3b95 200
201 printf("==================================================================\n");
202 printf("=========== RUNNING ANALYSIS TRAIN %s IN %s MODE ==========\n", kTrainName.Data(),smode.Data());
203 printf("==================================================================\n");
9748e967 204 printf("= Configuring analysis train for: =\n");
c38e3b95 205 if (iAODanalysis) printf("= AOD analysis =\n");
9748e967 206 else printf("= ESD analysis =\n");
207 if (iPhysicsSelection) printf("= Physics selection =\n");
c38e3b95 208 if (iESDfilter) printf("= ESD filter =\n");
209 if (iJETAN) printf("= Jet analysis =\n");
210 printf("==================================================================\n");
9748e967 211
212 char *printMask = ":: %20s %10d\n";
213 printf(printMask,"Fill AOD",(UInt_t)kFillAOD);
214 printf(printMask,"Save AOD", (UInt_t)kSaveAOD);
215 printf(printMask,"MC truth", (UInt_t)kUseMC);
216 printf(printMask,"KINE filter", (UInt_t)kUseKinefilter);
217 printf(printMask,"track refs", (UInt_t)kUseTR);
218 printf(printMask,"tags", (UInt_t)kUseESDTags);
219 printf(printMask,"AOD tags", (UInt_t)kUseAODTags);
220 printf(printMask,"debugging", (UInt_t)kUseDebug);
221 printf(printMask,"PAR files", (UInt_t)kUsePAR);
222 printf(printMask,"AliEn plugin", (UInt_t)kPluginUse);
223 printf(printMask,"PWG1 QA sym", iPWG1QASym);
224 printf(printMask,"PWG4 Source Sara",iPWG4TmpSourceSara);
aba42fcb 225 printf(printMask,"PWG4 Fragmentation",iPWG4Fragmentation);
9748e967 226 printf(printMask,"PWG4 Jet Chem",iPWG4JetChem);
227 printf(printMask,"PWG4 Jet tasks",iPWG4JetTasks);
228 printf(printMask,"PWG4 Jet Services",iPWG4JetServices);
229 printf(printMask,"PWG4 Jet Spectrum",iPWG4JetSpectrum);
230 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
231 printf(printMask,"PWG4 UE",iPWG4UE);
e0c120d9 232 printf(printMask,"PWG4 Leading UE",iPWG4LeadingUE);
9748e967 233 printf(printMask,"PWG4 Corrections UE",iPWG4CorrectionsUE);
234 printf(printMask,"PWG4 Pt QA MC",iPWG4PtQAMC);
235 printf(printMask,"PWG4 Pt Spectra",iPWG4PtSpectra);
236 printf(printMask,"PWG4 Pt QA TPC",iPWG4PtQATPC);
237 printf(printMask,"PWG4 Cosmics",iPWG4Cosmics);
238 printf(printMask,"PWG4 Three Jets",iPWG4ThreeJets);
239 printf(printMask,"PWG4 KMeans",iPWG4KMeans);
240 printf(printMask,"PWG4 Cluster",iPWG4Cluster);
241 printf(printMask,"PWG4 Part Corr",iPWG4PartCorr);
242 printf(printMask,"PWG4 Calo QA",iPWG4CaloQA);
243 printf(printMask,"PWG4 Jet Corr",iPWG4JetCorr);
244 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
245 printf(printMask,"PWG4 Tagged",iPWG4Tagged);
246 printf(printMask,"PWG4 omega to 3 pi ",iPWG4omega3pi);
247 printf(printMask,"PWG4 Gamma Conv",iPWG4GammaConv);
17d96675 248 printf(printMask,"PWG4 Calo Conv",iPWG4CaloConv);
9748e967 249 printf(printMask,"HighPt FilterMask",kHighPtFilterMask);
3878a941 250
c38e3b95 251 //==========================================================================
252 // Connect to back-end system
253 if (!Connect(smode)) {
254 ::Error("AnalysisTrain", "Could not connect to %s back-end", analysis_mode);
255 return;
256 }
257
258 // Load common libraries and set include path
259 if (!LoadCommonLibraries(smode)) {
260 ::Error("AnalysisTrain", "Could not load common libraries");
261 return;
262 }
3878a941 263
264
c38e3b95 265
266 // Make the analysis manager and connect event handlers
e84da0a5 267 AliAnalysisManager *mgr = new AliAnalysisManager("PWG4Train", "pwg4 mini train");
c38e3b95 268 if (kCommonOutputFileName.Length()>0)mgr->SetCommonFileName(kCommonOutputFileName.Data());
269 if (kProofSaveToAlien) mgr->SetSpecialOutputLocation(kProofOutdir);
4a6f59cb 270 mgr->SetNSysInfo(0);
c38e3b95 271 if (!strcmp(plugin_mode, "test")) mgr->SetNSysInfo(1);
53c63663 272 if (kUseSysInfo)mgr->SetNSysInfo(kUseSysInfo);
9a5c5b1e 273 mgr->SetSkipTerminate(kSkipTerminate);
4a6f59cb 274
c38e3b95 275 // Load analysis specific libraries
276 if (!LoadAnalysisLibraries(smode)) {
277 ::Error("AnalysisTrain", "Could not load analysis libraries");
278 return;
279 }
280
281 // Create input handler (input container created automatically)
282 if (iAODanalysis) {
283 // AOD input handler
284 AliAODInputHandler *aodH = new AliAODInputHandler();
285 mgr->SetInputEventHandler(aodH);
e6993a52 286 if (iPWG4JetTasks) aodH->AddFriend(Form("deltas/%s",kDeltaAODJetName.Data()));
287 if (iPWG4PartCorr) aodH->AddFriend(Form("deltas/%s"kDeltaAODJetName.Data()));
c38e3b95 288 } else {
289 // ESD input handler
290 AliESDInputHandler *esdHandler = new AliESDInputHandler();
291 if (kUseESDTags) esdHandler->SetReadTags();
c166d299 292 esdHandler->SetReadFriends(kFALSE);
c38e3b95 293 mgr->SetInputEventHandler(esdHandler);
4a6f59cb 294 // if(iPWG4PtQATPC&& !kTrainName.Contains("pass5"))esdHandler->SetActiveBranches("ESDfriend");
c166d299 295
c38e3b95 296 }
f4d11ac8 297
c38e3b95 298 // Monte Carlo handler
299 if (kUseMC && !iAODanalysis) {
300 AliMCEventHandler* mcHandler = new AliMCEventHandler();
301 mgr->SetMCtruthEventHandler(mcHandler);
302 mcHandler->SetReadTR(kUseTR);
303 }
304 // AOD output container, created automatically when setting an AOD handler
305 if (iAODhandler) {
306 // AOD output handler
307 AliAODHandler* aodHandler = new AliAODHandler();
308 aodHandler->SetOutputFileName("AliAOD.root");
6408fe42 309 aodHandler->SetFillAODforRun(kFillAOD);
c38e3b95 310
311 mgr->SetOutputEventHandler(aodHandler);
121e4bd5 312 //
c38e3b95 313 if (iAODanalysis) {
314
315 // aodHandler->SetCreateNonStandardAOD();
316 // if (iJETAN)aodHandler->SetOutputFileName(kDeltaAODJetName.Data());
317 }
318 AliAnalysisDataContainer * cout_aod = mgr->GetCommonOutputContainer();
319 cout_aod->SetSpecialOutput();
320 }
321 // Debugging if needed
b03b08a3 322
3878a941 323 if (kUseDebug){
324 mgr->SetDebugLevel(3);
325 }
4721d8c5 326 if(kUseSysInfo>0){
327 mgr->RegisterExtraFile("syswatch.root");
328 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
329 kGridMergeExclude += "syswatch.root";
330 }
b03b08a3 331 else{
332 AliLog::SetGlobalLogLevel(AliLog::kError);
333 }
46534866 334
335
c38e3b95 336 //==========================================================================
337 // Create the chain. In this example it is created only from ALIEN files but
338 // can be done to work in batch or grid mode as well.
339 TChain *chain = CreateChain(smode, plugin_mode);
340
341 //==========================================================================
342 // Load the tasks configuration macros for all wagons. These files are supposed now to be
343 // in the current workdir, but in AliEn they will be in the file catalog,
344 // mapped from AliRoot and pecified in the jdl input list.
345
346 // For now connection to top input container and common AOD output container
347 // is done in this macro, but in future these containers will be connected
348 // from each task configuration macro.
e84da0a5 349 if(iPhysicsSelection && !iAODanalysis){
d2e6cdd5 350 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskPhysicsSelection.C");
d8f81b37 351 AliPhysicsSelectionTask* physSelTask = AddTaskPhysicsSelection(kIsMC,kTRUE,kTRUE); // last flag also adds information on
e84da0a5 352 }
353
c38e3b95 354 if (iESDfilter && !iAODanalysis) {
355 // ESD filter task configuration.
ebad39a9 356 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskESDFilterPWG4Train.C");
c38e3b95 357 AliAnalysisTaskESDfilter *taskesdfilter = AddTaskESDFilter(kUseKinefilter,kUseMuonfilter);
17d96675 358 taskesdfilter->SetEnableFillAOD(kFALSE);
4721d8c5 359 if(kIsMC){
360 mgr->RegisterExtraFile("pyxsec_hists.root");
361 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
362 kGridMergeExclude += "pyxsec_hists.root";
363
364 }
c38e3b95 365 }
366
367 // AOD tags
368 if (kUseAODTags) {
369 AliAnalysisTaskTagCreator* tagTask = new AliAnalysisTaskTagCreator("AOD Tag Creator");
370 mgr->AddTask(tagTask);
371 AliAnalysisDataContainer *coutTags = mgr->CreateContainer("cTag", TTree::Class(),
372 AliAnalysisManager::kOutputContainer, "AOD.tag.root");
373 mgr->ConnectInput (tagTask, 0, mgr->GetCommonInputContainer());
374 mgr->ConnectOutput(tagTask, 1, coutTags);
375 }
376
377 // Jet analysis
378 if (iJETAN) {
379 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJets.C");
380 AliAnalysisTaskJets *taskjets = 0;
381 if(iJETAN&1)taskjets = AddTaskJets(kHighPtFilterMask);
b53f2e4f 382 if(iJETAN&2){
383 UInt_t selection = 0;
17d96675 384 if(!kFillAOD){
385 selection = 0xffffff&~(1<<13)&~(1<<5)&~(1<<6); // switch OFF DA and all R = 0.7 to save processing time
386 selection &= ~(1<<1)&~(1<<2)&~(1<<4)&~(1<<6)&~(1<<8)&~(1<<10)&~(1<<12);
387 }
388 else {
389 selection = 0xffffff&~(1<<13)&~(1<<5)&~(1<<6); // switch OFF DA and all R = 0.7 to save processing time;
390 selection &= ~(1<<1)&~(1<<2)&~(1<<4)&~(1<<6)&~(1<<8)&~(1<<10)&~(1<<12);
391 }
b53f2e4f 392 AddTaskJetsDelta(kDeltaAODJetName.Data(),kHighPtFilterMask,kUseAODMC,selection);
e0c120d9 393 AddTaskJets("AOD","FASTKT",0.2,kHighPtFilterMask);
b53f2e4f 394 }
c38e3b95 395 if (!taskjets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
396 }
397
bd80a748 398 if(iPWG4Cluster){
399 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCluster.C");
400 AliAnalysisTaskJetCluster *taskCl = 0;
401 if(iPWG4Cluster&1){
402 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelection,"KT");
403 if (!taskCl) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCluster cannot run for this train conditions - EXCLUDED");
404 }
405 if(iPWG4Cluster&2){
406 UInt_t selection = 0;
407 if(!iAODanalysis) selection = 0xffffff;
408 else selection = 1<<0|1<<1|1<<2|1<<3|1<<4|1<<5|1<<7|1<<8|1<<9;
409 selection&=~(1<<4); // exluded R = .04 already the dafault
410 AddTaskJetClusterDelta(kHighPtFilterMask,kUseAODMC,iPhysicsSelection,"KT",selection);
411 }
412 if(iPWG4Cluster&4){
413 UInt_t selection = 0;
414 if(!iAODanalysis){
415 selection = 0xffffff;
416 selection &= ~(1<<1)&~(1<<3)&~(1<<5)&~(1<<7)&~(1<<9);
417 }
418 else selection = 1<<0|1<<1|1<<2|1<<3|1<<4|1<<5|1<<7|1<<8|1<<9;
419 AddTaskJetClusterDelta(kHighPtFilterMask,kUseAODMC,iPhysicsSelection,"ANTIKT",selection);
420 AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelection,"ANTIKT",0.4,1);
421
422 }
423 }
424
c38e3b95 425 if (iDIJETAN) {
426 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskDiJets.C");
427 AliAnalysisTaskDiJets *taskdijets = 0;
82ebd295 428 if(iDIJETAN&1)taskdijets = AddTaskDiJets();
c38e3b95 429 if (!taskdijets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
82ebd295 430 if(iDIJETAN&2){
431 taskdijets = AddTaskDiJets("jetsAOD_CDF07");
432 taskdijets = AddTaskDiJets("jetsAOD_DA07");
433 taskdijets = AddTaskDiJets("jetsAOD_FASTJET07");
434 taskdijets = AddTaskDiJets("jetsAOD_FASTKT07");
435 taskdijets = AddTaskDiJets("jetsAOD_SISCONE07");
436 taskdijets = AddTaskDiJets("jetsAOD_UA107");
437 }
c38e3b95 438 }
439
c38e3b95 440 if(iPWG1QASym){
5dbdc61f 441 gROOT->LoadMacro("$ALICE_ROOT/PWG1/PilotTrain/AddTaskQAsym.C");
c38e3b95 442 AliAnalysisTaskQASym *taskQASym = AddTaskQAsym(-1);
443 if (!taskQASym) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQASym cannot run for this train conditions - EXCLUDED");
121e4bd5 444 }
c38e3b95 445
121e4bd5 446
447
448 if(iPWG4TmpSourceSara){
449 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskEta.C");
450 AliAnalysisTaskEta *taskEta = AddTaskEta();
451 if (!taskEta) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskEta cannot run for this train conditions - EXCLUDED");
c38e3b95 452 }
453
aba42fcb 454 if(iPWG4Fragmentation){
455 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskFragmentationFunction.C");
8be7acf2 456 AliAnalysisTaskFragmentationFunction *taskFrag = 0;
457 if(kUseAODMC){
458 taskFrag = AddTaskFragmentationFunction(1<<1,kHighPtFilterMask);
459 taskFrag = AddTaskFragmentationFunction(1<<2,kHighPtFilterMask);
460 taskFrag = AddTaskFragmentationFunction(1<<3,kHighPtFilterMask);
c2658535 461 taskFrag = AddTaskFragmentationFunction(1<<11); // w/o acceptance cuts
462 taskFrag = AddTaskFragmentationFunction(1<<12); // with acceptance cuts
463 // anti-kt
464 taskFrag = AddTaskFragmentationFunction(1<<21); // w/o acceptance cuts
465 taskFrag = AddTaskFragmentationFunction(1<<22); // with acceptance cuts
466
8be7acf2 467 }
468 else{
469 taskFrag = AddTaskFragmentationFunction(1<<0,kHighPtFilterMask);
c2658535 470 taskFrag = AddTaskFragmentationFunction(1<<10,kHighPtFilterMask);
471 taskFrag = AddTaskFragmentationFunction(1<<20,kHighPtFilterMask);
8be7acf2 472 }
473
aba42fcb 474 if (!taskFrag) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskFragmentationFunction cannot run for this train conditions - EXCLUDED");
c166d299 475 }
476
c580ebbb 477
9f77f0ce 478 if(iPWG4JetChem){
479 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetChem.C");
480 AliAnalysisTask *taskChem = AddTaskJetChem();
c580ebbb 481 if (!taskChem) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetChem cannot run for this train conditions - EXCLUDED");
482 }
483
484
c38e3b95 485 if(iPWG4JetServices){
486 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetServices.C");
487 AliAnalysisTaskJetServices *taskjetServ = 0;
488 taskjetServ = AddTaskJetServices();
489 if (!taskjetServ) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetServices cannot run for this train conditions - EXCLUDED");
53c63663 490 if(kGridRunRange[0]>0)taskjetServ->SetRunRange(kGridRunRange[0],kGridRunRange[1]);
8be7acf2 491 else taskjetServ->SetRunRange(100000,150000);
c28abe00 492 if(!kIsMC) taskjetServ->SetRealData(kTRUE);
dc6a7461 493 taskjetServ->SetUsePhysicsSelection((Bool_t)iPhysicsSelection);
9f77f0ce 494 taskjetServ->SetDebugLevel(0);
c38e3b95 495 }
496
c38e3b95 497 if(iPWG4JetSpectrum){
498 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetSpectrum2.C");
499 AliAnalysisTaskJetSpectrum2 *taskjetSpectrum = 0;
b53f2e4f 500 if(iPWG4JetSpectrum&1){
17d96675 501 taskjetSpectrum = AddTaskJetSpectrum2("jets","","",kHighPtFilterMask,iPhysicsSelection);
e6993a52 502 if(!iAODanalysis){
d3af0232 503 // taskjetSpectrum = AddTaskJetSpectrum2("jets","tracks32",32,iPhysicsSelection); // tmp hack to give it a different name
4d5d766e 504 // taskjetSpectrum = AddTaskJetSpectrum2("jets","64",64,iPhysicsSelection);
46534866 505
5ad2b067 506 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","clustersAOD_ANTIKT04","",kHighPtFilterMask,iPhysicsSelection);
507
f2dd0695 508 if(kIsMC){
17d96675 509
510 UInt_t eventSelection = AliAnalysisHelperJetTasks::kIsPileUp|AliAnalysisHelperJetTasks::kVertexIn;
511 if(iPhysicsSelection)eventSelection |= AliAnalysisHelperJetTasks::kPhysicsSelection;
512 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC_FASTJET04","",kHighPtFilterMask,iPhysicsSelection,eventSelection);
513 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC2_FASTJET04","",kHighPtFilterMask,iPhysicsSelection,eventSelection);
514
515 eventSelection = AliAnalysisHelperJetTasks::kIsCosmic|AliAnalysisHelperJetTasks::kVertexIn;
516 if(iPhysicsSelection)eventSelection |= AliAnalysisHelperJetTasks::kPhysicsSelection;
517 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC_FASTJET04","",kHighPtFilterMask,iPhysicsSelection,eventSelection);
518
519 eventSelection = AliAnalysisHelperJetTasks::kNone;
520 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC2_FASTJET04","",kHighPtFilterMask,iPhysicsSelection,eventSelection);
521 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC_FASTJET04","",kHighPtFilterMask,iPhysicsSelection,eventSelection);
46534866 522
523 }
524 else{
17d96675 525 UInt_t eventSelection = AliAnalysisHelperJetTasks::kIsPileUp|AliAnalysisHelperJetTasks::kVertexIn;
526 if(iPhysicsSelection)eventSelection |= AliAnalysisHelperJetTasks::kPhysicsSelection;
527 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","","",kHighPtFilterMask,iPhysicsSelection,eventSelection);
528
529 eventSelection = AliAnalysisHelperJetTasks::kIsCosmic|AliAnalysisHelperJetTasks::kVertexIn;
530 if(iPhysicsSelection)eventSelection |= AliAnalysisHelperJetTasks::kPhysicsSelection;
531 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","","",kHighPtFilterMask,iPhysicsSelection,eventSelection);
f2dd0695 532 }
e6993a52 533 }
d2e6cdd5 534 if (!taskjetSpectrum) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetSpectrum2 cannot run for this train conditions - EXCLUDED");
17d96675 535 // taskjetSpectrum->SetDebugLevel(1);
b53f2e4f 536 }
d2e6cdd5 537
e6993a52 538 if(iPWG4JetSpectrum&2){
539 UInt_t selection = 0;
17d96675 540 if(!iAODanalysis){
541 selection = 0xffffff;
542 // switch off 07 radii
543 selection &= ~(1<<6)&~(1<<11)&~(1<<12)&~(1<<13)&~(1<<14);
544 }
e6993a52 545 else selection = 1<<0|1<<1|1<<2|1<<3|1<<4|1<<5|1<<7|1<<8|1<<9;
e0c120d9 546 AddTaskJetSpectrum2Delta(kHighPtFilterMask,kUseAODMC,iPhysicsSelection,selection,0,kTRUE);
e6993a52 547 }
c38e3b95 548 }
58ef946c 549 if(iPWG4JCORRAN){
550 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJCORRANTask.C");
4721d8c5 551 AliJCORRANTask* corran = AddTaskJCORRAN(kDeltaAODJCORRANName.Data(),0);
58ef946c 552 if(!corran)::Warning("AnalysisTrainPWG4Jets", "AliJCORRANTask cannot run for this train conditions - EXCLUDED");
4721d8c5 553 else{
554 if(kDeltaAODJCORRANName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJCORRANName.Data());
555 }
58ef946c 556 }
557
c38e3b95 558 if(iPWG4UE){
559 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskUE.C");
560 AliAnalysisTaskUE *taskUE = 0;
561 if(iPWG4UE&1)taskUE = AddTaskUE();
562 if(iPWG4UE&2){
94ee88d4 563 taskUE =AddTaskUE("jetsAOD_CDF04","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
17d96675 564 // taskUE =AddTaskUE("jetsAOD_CDF07","CDF", "LJ", "TRANSV","MSP");
94ee88d4 565 taskUE =AddTaskUE("jetsAOD_SISCONE04","CDF", "LJ", "TRANSV","MSP");
17d96675 566 // taskUE =AddTaskUE("jetsAOD_SISCONE07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
94ee88d4 567 taskUE =AddTaskUE("jetsAOD_ICDF","CDF","LJ","TRANSV","MSP");
568 taskUE =AddTaskUE("jetsAOD_FASTKT04","CDF", "LJ", "TRANSV","MSP");
17d96675 569 // taskUE =AddTaskUE("jetsAOD_FASTKT07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
58ef946c 570 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta05", "TRANSV","MSP");
571 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta09", "TRANSV","MSP");
c38e3b95 572 }
2bb1f4ca 573
c38e3b95 574 if (!taskUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskUE cannot run for this train conditions - EXCLUDED");
575 }
e0c120d9 576
577 if(iPWG4LeadingUE){
578 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskLeadingTrackUE.C");
579 AliAnalysisTaskLeadingTrackUE *taskLeadingUE = AddTaskLeadingTrackUE(kUseMC);
580 if (!taskLeadingUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTasLeadingTrackkUE cannot run for this train conditions - EXCLUDED");
581 taskLeadingUE->SetFilterBit(64);
582 }
583
584
9748e967 585 if(iPWG4CorrectionsUE){
586 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCorrectionsUE.C");
587 AliAnalysisTaskCorrectionsUE *taskCorrectionsUE = 0;
588 if(iPWG4CorrectionsUE&1)taskCorrectionsUE = AddTaskCorrectionsUE("jetsAOD_NONE","CDF","MP_eta05","TRANSV","MSP",kFALSE);
589 if (!taskCorrectionsUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCorrectionsUE cannot run for this train conditions - EXCLUDED");
590 }
c38e3b95 591
592 if(iPWG4ThreeJets){
593 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskThreeJets.C");
594 AliAnalysisTaskThreeJets *taskThree = AddTaskThreeJets();
595 if(!taskThree)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskThreets cannot run for this train conditions - EXCLUDED");
596 }
c38e3b95 597 if(iPWG4PtQAMC){
598 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQAMC.C");
f87effcf 599 AliPWG4HighPtQAMC *taskQAMC = 0;
600 if(kUseMC){
601 if(iPWG4PtQAMC&1)taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),0);
602 if(iPWG4PtQAMC&1)taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),1);
603 }
c38e3b95 604 if (!taskQAMC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQAMC cannot run for this train conditions - EXCLUDED");
605 }
606
607 if(iPWG4PtQATPC){
608 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQATPConly.C");
10295ac3 609 AliPWG4HighPtQATPConly *taskQATPC = 0;
b1cd0099 610 if(iPWG4PtQATPC&1)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),1);
611 if(iPWG4PtQATPC&2)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),2);
10295ac3 612
613 if (!taskQATPC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQATPC cannot run for this train conditions - EXCLUDED");
c38e3b95 614 }
3878a941 615
1f329128 616 if(iPWG4Cosmics){
617 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4CosmicCandidates.C");
618
619 AliPWG4CosmicCandidates *taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(0);
620 taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(1);
621
622 if (!taskPWG4CosmicCandidates) ::Warning("AnalysisTrainPWG4Jets", "AddTaskPWG4CosmicCandidates cannot run for this train conditions - EXCLUDED");
623 }
624
625
c38e3b95 626 if(iPWG4PtSpectra){
627 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtSpectra.C");
b1cd0099 628 AliPWG4HighPtSpectra *taskPtSpectra = AddTaskPWG4HighPtSpectra(kGridDataSet.Data());
c38e3b95 629 if (!taskPtSpectra) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskPtSpectra cannot run for this train conditions - EXCLUDED");
630 }
b53f2e4f 631 if(iPWG4KMeans){
632 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskKMeans.C");
633 AliAnalysisTaskKMeans *taskKMeans = AddTaskKMeans();
634 if (!taskKMeans) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskKMenans cannot run for this train conditions - EXCLUDED");
635 }
636
c38e3b95 637 if(iPWG4PartCorr){
638 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPartCorr.C");
14526afb 639 AliAnalysisTaskParticleCorrelation *taskpartcorrPHOS = AddTaskPartCorr("AOD", "PHOS",kFALSE,kIsMC);
c38e3b95 640 if (!taskpartcorrPHOS) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation PHOS cannot run for this train conditions - EXCLUDED");
14526afb 641 AliAnalysisTaskParticleCorrelation *taskpartcorrEMCAL = AddTaskPartCorr("AOD", "EMCAL",kFALSE,kIsMC);
c38e3b95 642 if (!taskpartcorrEMCAL) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation EMCAL cannot run for this train conditions - EXCLUDED");
4721d8c5 643 if(kDeltaAODPartCorrName.Length()>0)mgr->RegisterExtraFile(kDeltaAODPartCorrName.Data());
121e4bd5 644 }
645
d2e6cdd5 646 if(iPWG4CaloQA){
647 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/QA/AddTaskCalorimeterQA.C");
9748e967 648 AliAnalysisTaskParticleCorrelation *taskcaloQA = AddTaskCalorimeterQA("ESD",kFALSE,kIsMC,kCaloQAOutputFileName.Data());
d2e6cdd5 649 if(!taskcaloQA)::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation QA cannot run - EXCLUDED");
aba42fcb 650 // if(kCaloQAOutputFileName.Length()>0)mgr->RegisterExtraFile(kCaloQAOutputFileName.Data());
d2e6cdd5 651 }
652
d2e6cdd5 653 if(iPWG4JetCorr){
654 // using namespace JetCorrelHD;
d3af0232 655 TString cdir = gSystem->WorkingDirectory();
656 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
d2e6cdd5 657 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCorrel.C");
658 AliAnalysisTaskJetCorrel *taskjetcorr = AddTaskJetCorrel();
d3af0232 659 gSystem->ChangeDirectory(cdir);
c166d299 660 if (!taskjetcorr) ::Warning("AnalysisTrainNew", "AliAnalysisTaskJetCorrel cannot run for this train conditions - EXCLUDED");
d2e6cdd5 661 }
662
911a740f 663 if(iPWG4Tagged){
664 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskTaggedPhotons.C");
665 AliAnalysisTaskTaggedPhotons * taskTagged = AddTaskTaggedPhotons(kFALSE); // EMCAL
58ef946c 666 taskTagged = AddTaskTaggedPhotons(kTRUE); // PHOS
911a740f 667 if (!taskTagged) ::Warning("AnalysisTrainNew", "AliAnalysisTaskTaggedPhotons cannot run for this train conditions - EXCLUDED");
668 }
121e4bd5 669 if (iPWG4omega3pi) {
670 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskomega3pi.C");
671 AliAnalysisTaskOmegaPi0PiPi *taskomega3pi = AddTaskomega3pi();
672 if (!taskomega3pi) ::Warning("AnalysisTrainNew", "AliAnalysisTaskomega3pi cannot run\
673 for these train conditions - EXCLUDED");
674 }
675
53c63663 676 // PWG4 gamma conversion analysis
677 if (iPWG4GammaConv) {
678 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskGammaConversion.C");
679 TString cdir = gSystem->WorkingDirectory();
680 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
681 // TString gcArguments = "-run-on-train -run-jet -run-chic -run-neutralmeson -run-cf";
58ef946c 682 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
683 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
b0a36f28 684 TString gcArguments = "-run-on-train -run-jet -run-omega-meson -use-own-xyz -run-neutralmeson -no-aod";
4d5d766e 685 TString kGCAnalysisCutSelectionId="900356200010031";
686 gcArguments.Append(Form(" -set-cut-selection %s ",kGCAnalysisCutSelectionId.Data()));
53c63663 687 if(!kIsMC)gcArguments += " -mc-off";
688 AliAnalysisTaskGammaConversion * taskGammaConversion = AddTaskGammaConversion(gcArguments,mgr->GetCommonInputContainer());
689 gSystem->ChangeDirectory(cdir);
121e4bd5 690 taskGammaConversion->SelectCollisionCandidates();
53c63663 691 if (!taskGammaConversion) ::Warning("AnalysisTrainNew", "AliAnalysisTaskGammaConversion cannot run for these train conditions - EXCLUDED");
692 }
693
17d96675 694 if (iPWG4CaloConv) {
695 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCaloConv.C");
696 AliAnalysisTaskCaloConv * taskCaloConv = AddTaskCaloConv();
697 if (!taskCaloConv) ::Warning("AnalysisTrainNew", "AliAnalysisTaskCaloConv cannot run for these train conditions - EXCLUDED");
698 }
699
700
3878a941 701
c38e3b95 702 //==========================================================================
703 // FOR THE REST OF THE TASKS THE MACRO AddTaskXXX() is not yet implemented/
704 // Run the analysis
705 //
706 if (kPluginUse) {
707 AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
708 AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
709 }
710
711 if (mgr->InitAnalysis()) {
712 mgr->PrintStatus();
713 // if (kSaveTrain || strlen(config_file)) gSystem->ChangeDirectory(kTrainName);
e84da0a5 714 if (!strcmp(plugin_mode,"submit")&&smode=="GRID"){
c38e3b95 715 TString alien_workdir = gGrid->GetHomeDirectory();
716 if (iAODanalysis) alien_workdir += "analysisAOD";
717 else alien_workdir += "analysisESD";
3878a941 718 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
c38e3b95 719 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
e84da0a5 720 printf("=== AnalysisTrainPWG4Jets:: Registering jdl in the work directory alien://%s/%s, should be done by the manager! ===\n",
c38e3b95 721 alien_workdir.Data(),gridhandler->GetGridOutputDir());
58ef946c 722
723 TString dest;
724 dest = Form("%s/%s/%s.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
725 if(AliAnalysisAlien::FileExists(dest.Data())){
726 // Printf("%s exist on grid removing...",dest.Data());
727 // gGrid->Rm(dest.Data());
728 }
729 TFile::Cp(Form("file:%s.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
4721d8c5 730
731
732 TString dest;
733 dest = Form("%s/%s/%s_merge.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
734 if(AliAnalysisAlien::FileExists(dest.Data())){
735 // Printf("%s exist on grid removing...",dest.Data());
736 // gGrid->Rm(dest.Data());
737 }
738 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
739
58ef946c 740
73b7619a 741 dest = Form("%s/rootfiles/STEER/LQ1dRef_v1.root",gGrid->GetHomeDirectory());
58ef946c 742 if(AliAnalysisAlien::FileExists(dest.Data())){
743 Printf("%s exist on grid removing...",dest.Data());
744 gGrid->Rm(dest.Data());
745 }
746 TFile::Cp(Form("file:%s/STEER/LQ1dRef_v1.root",
9748e967 747 gSystem->ExpandPathName("$ALICE_ROOT")),Form("alien://%s",dest.Data()));
c38e3b95 748 }
3878a941 749 AliLog::SetGlobalLogLevel(AliLog::kError);
c166d299 750 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
751 TFile * fM = TFile::Open("manager_local.root","RECREATE");
752 mgr->Write();
753 fM->Close();
754 }
46534866 755
756 // grmpf, aliroot error handler overwrites root
757 gErrorIgnoreLevel = kErrorIgnoreLevel;
758 if(gErrorIgnoreLevel>3000) AliLog::SetGlobalLogLevel(AliLog::kFatal);
c38e3b95 759 StartAnalysis(smode, chain);
4a6f59cb 760 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
761 for(int i = 0;i < mgr->GetTopTasks()->GetEntries();i++){
762 mgr->ProfileTask(i);
763 }
764 }
c38e3b95 765 if (!strcmp(plugin_mode, "offline")&&smode=="GRID"){
e84da0a5 766 // Offline mode path files
767 // PatchJDL();
768 PatchAnalysisMacro();
769 }
c38e3b95 770
e84da0a5 771 if (kSaveTrain && smode=="GRID") {
772 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
773 TString alien_workdir = gGrid->GetHomeDirectory();
774 if (iAODanalysis) alien_workdir += "analysisAOD";
3878a941 775 else alien_workdir += "analysisESD";
776 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
e84da0a5 777 // kGridOutdir = gridhandler->GetGridOutputDir();
778 printf("=== Registering ConfigTrain.C in the work directory <%s> ===\n",
c38e3b95 779 alien_workdir.Data());
e84da0a5 780 if (AliAnalysisAlien::FileExists(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data())))
781 gGrid->Rm(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
782 if (strcmp(plugin_mode, "test"))
783 TFile::Cp(Form("file:%sConfig.C",kTrainName.Data()), Form("alien://%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
784 }
785 }
c38e3b95 786}
787
788//______________________________________________________________________________
789void StartAnalysis(const char *mode, TChain *chain) {
790// Start analysis.
791 Int_t imode = -1;
792 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
793 if (!strcmp(mode, "LOCAL")) imode = 0;
794 if (!strcmp(mode, "PROOF")) imode = 1;
795 if (!strcmp(mode, "GRID")) imode = 2;
796 switch (imode) {
797 case 0:
798 if (!chain) {
799 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
800 return;
801 }
82ebd295 802 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
c38e3b95 803 return;
804 case 1:
805 if (!kProofDataSet.Length()) {
806 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "kProofDataSet is empty");
807 return;
808 }
809 mgr->StartAnalysis(mode, kProofDataSet, kProofEvents,kProofOffset);
810 return;
811 case 2:
812 if (kPluginUse) {
813 if (!mgr->GetGridHandler()) {
814 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Grid plugin not initialized");
815 return;
816 }
ebad39a9 817 mgr->StartAnalysis("grid",chain,kNumberOfEvents);
c38e3b95 818 } else {
819 if (!chain) {
820 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
821 return;
822 }
823 mgr->StartAnalysis(mode, chain);
ebad39a9 824 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
c38e3b95 825 }
826 return;
827 }
828}
829
830//______________________________________________________________________________
831void CheckModuleFlags(const char *mode) {
832// Checks selected modules and insure compatibility
833 Int_t imode = -1;
834 if (!strcmp(mode, "LOCAL")) imode = 0;
835 if (!strcmp(mode, "PROOF")) imode = 1;
836 if (!strcmp(mode, "GRID")) imode = 2;
837
838
e84da0a5 839 if (kUseCPAR) {
840 kPluginAliRootVersion = ""; // NO aliroot if we use CPAR
841 }
c38e3b95 842
843 if (imode==1) {
844 if (!kUsePAR) {
845 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PAR files enabled due to PROOF analysis");
846 kUsePAR = kTRUE;
847 }
848 }
849 if (imode != 2) {
850 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AliEn plugin disabled since not in GRID mode");
851 kPluginUse = kFALSE;
852 }
853
854
855 if(!kIsMC){
856 // switch off anthin related to MC
857 kUseMC = 0;
858 kUseAODMC = 0;
859 kUseTR = kFALSE;
860 }
861
862 if (iAODanalysis) {
863 // AOD analysis
864 if (kUseMC)
865 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "MC usage disabled in analysis on AOD's");
866 if (kUseAODTags)
867 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AOD tags usage disabled in analysis on AOD's");
868 kUseMC = kFALSE;
869 kUseTR = kFALSE;
870 kUseAODTags = kFALSE;
871 if (iESDfilter)
872 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "ESD filter disabled in analysis on AOD's");
873 iESDfilter = 0;
e84da0a5 874 if (iPhysicsSelection)
875 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "Physics Selection disabled in analysis on AOD's");
876 iPhysicsSelection = 0;
c38e3b95 877 if (!iAODhandler) {
878 if (iJETAN)
879 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "JETAN disabled in analysis on AOD's without AOD handler");
880 iJETAN = 0;
881 iDIJETAN = 0;
882 }
883 // Disable tasks that do not work yet on AOD data
58ef946c 884 if(iPWG4JCORRAN)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 JCORRAN disabled in analysis on AOD's");
4d62ae1a 885 iPWG4JCORRAN = 0;
c38e3b95 886 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
887 iPWG4PtQAMC = 0;
888 if( iPWG4PtQATPC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtTPC disabled in analysis on AOD's");
889 iPWG4PtQATPC = 0;
1f329128 890 if( iPWG4Cosmics)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Comics disabled in analysis on AOD's");
891 iPWG4Cosmics = 0;
892
c38e3b95 893 if( iPWG4PtSpectra)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
894 iPWG4PtSpectra = 0;
b53f2e4f 895 if(iPWG4KMeans)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4KMeans disabled on AOD's");
896 iPWG4KMeans = 0;
d2e6cdd5 897 if (iPWG4JetCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4Jetcorr disabled on AOD's");
898 iPWG4JetCorr = 0;
c38e3b95 899 if (iPWG4PartCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4partcorr disabled on AOD's");
900 iPWG4PartCorr = 0;
d2e6cdd5 901 if (iPWG4CaloQA)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4CaloQA disabled on AOD's");
902 iPWG4CaloQA = 0;
911a740f 903 if (iPWG4Tagged)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4tagged disabled on AOD's");
904 iPWG4Tagged = 0;
121e4bd5 905 if (iPWG4omega3pi)
906 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG4omega3pi disabled on AOD's");
907 iPWG4omega3pi = 0;
c38e3b95 908 if(iPWG1QASym)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG1 QA Sym disabled in analysis on AOD's");
53c63663 909 if (iPWG4GammaConv)::Info("AnalysisPWG4Jets.C::CheckModuleFlags", "PWG4gammaconv disabled on AOD's");
910 iPWG4GammaConv = 0;
c38e3b95 911 iPWG1QASym = 0;
912 } else {
913 // ESD analysis
914 if (!kUseMC){
915 kUseTR = kFALSE;
916
917 if(kUseKinefilter)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Kine Filter disabled in analysis without MC");
918 kUseKinefilter = kFALSE;
919 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis without MC");
920 iPWG4PtQAMC = 0;
9748e967 921 if( iPWG4CorrectionsUE)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 CorrectionsUE disabled in analysis without MC");
922 iPWG4CorrectionsUE = 0;
c38e3b95 923 }
924 if (!kUseTR) {
c166d299 925 if(iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "iPWG4QATPCMC disabled if not reading track references");
b03b08a3 926 iPWG4PtQAMC = 0;
c38e3b95 927 }
e84da0a5 928 if (iJETAN){
929 iESDfilter=1;
930 }
c38e3b95 931 if (!iESDfilter){
932 kUseKinefilter = kFALSE;
933 kUseMuonfilter = kFALSE;
934 }
935 if(!iJETAN){
9748e967 936 iPWG4JetSpectrum = iPWG4UE = iPWG4CorrectionsUE = iPWG4ThreeJets = iDIJETAN = 0;
c38e3b95 937 }
938 }
e0c120d9 939 iPWG4JetTasks = iPWG4JetServices||iPWG4JetSpectrum||iPWG4UE||iPWG4LeadingUE||iPWG4PtQAMC||iPWG4PtSpectra||iPWG4PtQATPC||iPWG4Cosmics||iPWG4ThreeJets||iPWG4JetChem||iPWG4Fragmentation;
d2e6cdd5 940 iPWG4PartCorrLibs = iPWG4PartCorr||iPWG4Tagged||iPWG4CaloQA;
17d96675 941 iPWG4GammaConvLib = iPWG4GammaConv||iPWG4CaloConv;
942
943
944 iEMCUtilLibs = iPWG4PartCorrLibs||iPWG4JCORRAN||iPWG4GammaConvLib;
e6993a52 945 iJETANLib = iPWG4JetTasks||iJETAN||iDIJETAN;
17d96675 946
c38e3b95 947 if (iESDfilter) {iAODhandler=1;}
948 if (kUseKinefilter && !kUseMC) kUseKinefilter = kFALSE;
949 if (kUseAODTags && !iAODhandler) kUseAODTags = kFALSE;
950
951
952
953}
954
955//______________________________________________________________________________
956Bool_t Connect(const char *mode) {
957// Connect <username> to the back-end system.
958 Int_t imode = -1;
959 if (!strcmp(mode, "LOCAL")) imode = 0;
960 if (!strcmp(mode, "PROOF")) imode = 1;
961 if (!strcmp(mode, "GRID")) imode = 2;
962 TString username = gSystem->Getenv("alien_API_USER");
963 switch (imode) {
964 case 0:
965 break;
966 case 1:
967 if (!username.Length()) {
968 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
969 1. Have called: alien-token-init <username>\n \
970 2. Have called: >source /tmp/gclient_env_$UID");
971 return kFALSE;
972 }
973 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to PROOF cluster <%s>",
974 username.Data(), kProofCluster.Data());
975 gEnv->SetValue("XSec.GSI.DelegProxy", "2");
976// TProof::Open(Form("%s@%s:31093", username.Data(), kProofCluster.Data()));
977 TProof::Open(Form("%s@%s", username.Data(), kProofCluster.Data()));
978 if (!gProof) {
979 if (strcmp(gSystem->Getenv("XrdSecGSISRVNAMES"), "lxfsrd0506.cern.ch"))
980 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Environment XrdSecGSISRVNAMES different from lxfsrd0506.cern.ch");
981 return kFALSE;
982 }
983 if(kProofClearPackages)gProof->ClearPackages();
984
985 if(kProofSaveToAlien){
986 TGrid::Connect("alien://");
987 if (gGrid) {
988 TString homedir = gGrid->GetHomeDirectory();
989 TString workdir = homedir + kTrainName;
990 if (!gGrid->Cd(workdir)) {
991 gGrid->Cd(homedir);
992 if (gGrid->Mkdir(workdir)) {
993 gGrid->Cd(kTrainName);
994 ::Info("AnalysisTrainPWG4Jets::Connect()", "Directory %s created", gGrid->Pwd());
995 }
996 }
997 gGrid->Mkdir("proof_output");
998 gGrid->Cd("proof_output");
999 kProofOutdir = Form("alien://%s", gGrid->Pwd());
1000 }
1001 }
1002 break;
1003 case 2:
1004 if (!username.Length()) {
1005 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1006 1. Have called: alien-token-init <username>\n \
1007 2. Have called: >source /tmp/gclient_env_$UID");
1008 return kFALSE;
1009 }
1010 if (kPluginUse && !gSystem->Getenv("alien_CLOSE_SE")) {
1011 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode),
1012 "When using the AliEn plugin it is preferable to define the \
1013 variable alien_CLOSE_SE in your environment.");
1014 return kFALSE;
1015 }
1016 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to AliEn ...",
1017 username.Data());
1018 TGrid::Connect("alien://");
1019 if (!gGrid || !gGrid->IsConnected()) return kFALSE;
1020 break;
1021 default:
1022 ::Error("AnalysisTrainPWG4Jets.C::Connect", "Unknown run mode: %s", mode);
1023 return kFALSE;
1024 }
1025 ::Info("AnalysisTrainPWG4Jets.C::Connect","Connected in %s mode", mode);
1026 return kTRUE;
1027}
1028
1029//______________________________________________________________________________
1030Bool_t LoadCommonLibraries(const char *mode)
1031{
1032// Load common analysis libraries.
1033 Int_t imode = -1;
1034 if (!strcmp(mode, "LOCAL")) imode = 0;
1035 if (!strcmp(mode, "PROOF")) imode = 1;
1036 if (!strcmp(mode, "GRID")) imode = 2;
1037 if (!gSystem->Getenv("ALICE_ROOT")) {
ebad39a9 1038 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Analysis train requires that ALICE_ROOT is set to pick up Configurations");
c38e3b95 1039 return kFALSE;
1040 }
1041 Bool_t success = kTRUE;
1042 // ROOT libraries
1043 gSystem->Load("libTree.so");
1044 gSystem->Load("libGeom.so");
1045 gSystem->Load("libVMC.so");
1046 gSystem->Load("libPhysics.so");
1047
1048 // Load framework classes. Par option ignored here.
1049 switch (imode) {
1050 case 0:
1051 case 2:
1052 if (kUseCPAR) {
1053 success &= LoadLibrary("STEERBase", mode, kTRUE);
1054 success &= LoadLibrary("ESD", mode, kTRUE);
1055 success &= LoadLibrary("AOD", mode, kTRUE);
1056 success &= LoadLibrary("ANALYSIS", mode, kTRUE);
1057 success &= LoadLibrary("ANALYSISalice", mode, kTRUE);
1058 success &= LoadLibrary("CORRFW", mode, kTRUE);
1059 } else {
1060 success &= LoadLibrary("libSTEERBase.so", mode);
1061 success &= LoadLibrary("libESD.so", mode);
1062 success &= LoadLibrary("libAOD.so", mode);
1063 success &= LoadLibrary("libANALYSIS.so", mode);
1064 success &= LoadLibrary("libANALYSISalice.so", mode);
1065 success &= LoadLibrary("libCORRFW.so", mode);
1066 gROOT->ProcessLine(".include $ALICE_ROOT/include");
1067 }
1068 break;
1069 case 1:
1070 Int_t ires = -1;
1071 if (kProofUseAFPAR && !gSystem->AccessPathName(kProofAFversion)) ires = gProof->UploadPackage(kProofAFversion);
1072 if (ires < 0) {
1073 success &= LoadLibrary("STEERBase", mode);
1074 success &= LoadLibrary("ESD", mode);
1075 success &= LoadLibrary("AOD", mode);
1076 success &= LoadLibrary("ANALYSIS", mode);
1077 success &= LoadLibrary("ANALYSISalice", mode);
1078 success &= LoadLibrary("CORRFW", mode);
1079 } else {
1080 ires = gProof->EnablePackage(kProofAFversion);
1081 if (ires<0) success = kFALSE;
1082 success &= LoadLibrary("CORRFW", mode);
1083 }
1084 break;
1085 default:
1086 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Unknown run mode: %s", mode);
1087 return kFALSE;
1088 }
1089 if (success) {
1090 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: SUCCESS");
1091 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Include path for Aclic compilation:\n%s",
1092 gSystem->GetIncludePath());
1093 } else {
1094 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: FAILED");
1095 }
1096
1097 return success;
1098}
1099
1100//______________________________________________________________________________
1101Bool_t LoadAnalysisLibraries(const char *mode)
1102{
1103// Load common analysis libraries.
9748e967 1104 Bool_t success = kTRUE;
c38e3b95 1105 if (iESDfilter) {
b0a36f28 1106 /*
c38e3b95 1107 if (!LoadLibrary("PWG3base", mode, kTRUE) ||
1108 !LoadLibrary("PWG3muon", mode, kTRUE)) return kFALSE;
b0a36f28 1109 */
c38e3b95 1110 }
1111 // JETAN
e6993a52 1112 if (iJETANLib) {
b53f2e4f 1113 // this part needs some rework in case we do not need the fastjed finders for processing
1114 if (!LoadLibrary("JETAN", mode, kTRUE)) return kFALSE;
c38e3b95 1115 if (!strcmp(mode, "PROOF")){
ef1e462f 1116 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libCGAL.so\"\)", kTRUE);
c38e3b95 1117 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libfastjet.so\"\)", kTRUE);
1118 // problem when loading siscone copiled with different gcc version??
1119 // gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libsiscone.so\"\)", kTRUE);
1120 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libSISConePlugin.so\"\)", kTRUE);
1121 }
b53f2e4f 1122 if(!kUsePAR){
e84da0a5 1123 if (!LoadLibrary("CGAL", mode, kTRUE)) return kFALSE;
1124 if (!LoadLibrary("fastjet", mode, kTRUE)) return kFALSE;
1125 if (!LoadLibrary("siscone", mode, kTRUE)) return kFALSE;
1126 if (!LoadLibrary("SISConePlugin", mode, kTRUE)) return kFALSE;
1127 }
1128 else{
1129 // par files plus FASTJET needs some extra work... need to change
1130 // the loading sequence in the auto generated .C file
1131 if (!LoadLibrary("libCGAL.so", mode, kTRUE)) return kFALSE;
1132 if (!LoadLibrary("libfastjet.so", mode, kTRUE)) return kFALSE;
1133 if (!LoadLibrary("libsiscone.so", mode, kTRUE)) return kFALSE;
1134 if (!LoadLibrary("libSISConePlugin.so", mode, kTRUE)) return kFALSE;
1135 }
c38e3b95 1136 if (!LoadLibrary("FASTJETAN", mode, kTRUE)) return kFALSE;
1137 }
1138 if(iPWG4JetTasks){
c38e3b95 1139 if (!LoadLibrary("PWG4JetTasks", mode, kTRUE)) return kFALSE;
1140 }
58ef946c 1141
c38e3b95 1142 if(iPWG1QASym){
99bfd7f7 1143 if (!LoadSource(Form("%s/PWG1/AliAnalysisTaskQASym.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
c38e3b95 1144 }
121e4bd5 1145 if(iPWG4TmpSourceSara){
c166d299 1146 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
121e4bd5 1147 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskEta.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1148 }
58ef946c 1149
9f77f0ce 1150 /*
1151 if(iPWG4JetChem){
c580ebbb 1152 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
1153 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskJetChem.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1154 }
9f77f0ce 1155 */
c166d299 1156
4721d8c5 1157 if(iEMCUtilLibs){
1158 if (!LoadLibrary("EMCALUtils", mode, kTRUE) ||
1159 !LoadLibrary("PHOSUtils", mode, kTRUE)) return kFALSE;
1160 }
1161
911a740f 1162 if (iPWG4PartCorrLibs) {
4721d8c5 1163 if (!LoadLibrary("PWG4PartCorrBase", mode, kTRUE) ||
c38e3b95 1164 !LoadLibrary("PWG4PartCorrDep", mode, kTRUE)) return kFALSE;
1165 }
4721d8c5 1166 if(iPWG4JCORRAN){
1167 // PWG4 particle correlations
1168 if(!LoadLibrary("PWG4JCORRAN",mode,kTRUE))return kFALSE;
1169 }
d2e6cdd5 1170 if (iPWG4JetCorr) {
1171 if (!LoadLibrary("PWG4JetCorrel", mode, kTRUE)) return kFALSE;
1172 }
121e4bd5 1173 if (iPWG4omega3pi) {
1174 if (!LoadLibrary("PWG4omega3pi", mode, kTRUE)) return kFALSE;
1175 }
17d96675 1176 if (iPWG4GammaConvLib) {
53c63663 1177 if (!LoadLibrary("PWG4GammaConv", mode, kTRUE)) return kFALSE;
1178 }
c38e3b95 1179
1180 ::Info("AnalysisTrainPWG4Jets.C::LoadAnalysisLibraries", "Load other libraries: SUCCESS");
1181 return kTRUE;
1182}
1183
1184//______________________________________________________________________________
1185Bool_t LoadLibrary(const char *module, const char *mode, Bool_t rec=kFALSE)
1186{
1187// Load a module library in a given mode. Reports success.
1188 Int_t imode = -1;
1189 Int_t result;
1190 TString smodule(module);
1191 if (!strcmp(mode, "LOCAL")) imode = 0;
1192 if (!strcmp(mode, "PROOF")) imode = 1;
1193 if (!strcmp(mode, "GRID")) imode = 2;
1194 TString mod(module);
1195 if (!mod.Length()) {
1196 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Empty module name");
1197 return kFALSE;
1198 }
1199 // If a library is specified, just load it
1200 if (smodule.EndsWith(".so")) {
1201 mod.Remove(mod.Index(".so"));
1202 result = gSystem->Load(mod);
1203 if (result < 0) {
1204 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load library %s", module);
1205 return kFALSE;
1206 }
1207 if (rec) anaLibs += Form("%s.so ",mod.Data());
e84da0a5 1208 if (rec) anaLibsExtra += Form("%s.so ",mod.Data());
c38e3b95 1209 return kTRUE;
1210 }
1211 // Check if the library is already loaded
1212 if (strlen(gSystem->GetLibraries(Form("%s.so", module), "", kFALSE)) > 0)
1213 return kTRUE;
1214 switch (imode) {
1215 case 0:
1216 case 2:
1217 if (kUsePAR) {
1218 result = SetupPar(module);
1219 if (rec) anaPars += Form("%s.par ", module);
1220 } else {
1221 result = gSystem->Load(Form("lib%s.so", module));
1222 if (rec) anaLibs += Form("lib%s.so ", module);
1223 }
1224 break;
1225 case 1:
1226 if(!gSystem->AccessPathName(module)){
1227 ::Info("AnalysisTrainPWG4Jets.C::LoadLibrary", "Removing directory %s",module);
1228 gSystem->Exec(Form("rm -rf %s",module));
1229 }
1230 result = gProof->UploadPackage(module);
1231 if (result<0) {
1232 result = gProof->UploadPackage(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", module)));
1233 if (result<0) {
1234 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not find module %s.par in current directory nor in $ALICE_ROOT", module);
1235 return kFALSE;
1236 }
1237 }
1238 result = gProof->EnablePackage(module);
1239 break;
1240 default:
1241 return kFALSE;
1242 }
1243 if (result < 0) {
1244 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load module %s", module);
1245 return kFALSE;
1246 }
1247 return kTRUE;
1248}
1249
1250
1251
1252//______________________________________________________________________________
1253Bool_t LoadSource(const char *source, const char *mode, Bool_t rec=kFALSE)
1254{
1255// Load a module library in a given mode. Reports success.
1256 Int_t imode = -1;
1257 Int_t result = -1;
1258 if (!strcmp(mode, "LOCAL")) imode = 0;
1259 if (!strcmp(mode, "PROOF")) imode = 1;
1260 if (!strcmp(mode, "GRID")) imode = 2;
1261 TString ssource(source);
1262 TString basename = gSystem->BaseName(ssource.Data());
1263 if (!ssource.Length()) {
1264 ::Error("AnalysisTrainPWG4Jets.C::LoadSource", "Empty task name");
1265 return kFALSE;
1266 }
4d62ae1a 1267 // we have a source code so compile it
c38e3b95 1268 if (ssource.EndsWith(".cxx")) {
1269 // need to copy it here other wise the path is also used on grid...
1270 ssource.Remove(ssource.Index(".cxx"));
1271 basename.Remove(basename.Index(".cxx"));
1272 Printf("LoadSources:: Copying... path %s{cxx,h}",ssource.Data());
1273 gSystem->Exec(Form("cp %s.cxx . ",ssource.Data()));
1274 gSystem->Exec(Form("cp %s.h . ",ssource.Data()));
1275 // Path to code
1276 // only needed for local compilation, in grid and proof mode
1277 // the task headers are uploaded
1278 // path.Remove(path.Index(gSystem->BaseName(path.Data())));
1279 // Printf("LoadSources:: Including path %s",path.Data());
1280 // if(path.Length()>0)gROOT->ProcessLine(Form(".include %s",path.Data()));
1281 Printf("LoadSources:: Loading... path %s",basename.Data());
1282 switch (imode) {
1283 case 0:
b53f2e4f 1284 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1285 break;
1286 case 1:
b53f2e4f 1287 result = gProof->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1288 break;
1289 case 2:
b53f2e4f 1290 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1291 if (rec){
1292 // what we want to compile
1293 anaSources += Form("%s.cxx ",basename.Data());
1294 // what we need as input...
1295 anaLibs += Form("%s.cxx %s.h ",basename.Data(),basename.Data());
1296 }
1297 break;
1298 default:
1299 return kFALSE;
1300 }
1301 }
1302 if (result < 0) {
1303 ::Error("AnalysisTrainPWG4Jets.C::LoadSources", "Could not load source %s", source);
1304 return kFALSE;
1305 }
1306 return kTRUE;
1307}
1308
1309
1310//______________________________________________________________________________
1311TChain *CreateChain(const char *mode, const char *plugin_mode)
1312{
1313// Create the input chain
1314 Int_t imode = -1;
1315 if (!strcmp(mode, "LOCAL")) imode = 0;
1316 if (!strcmp(mode, "PROOF")) imode = 1;
1317 if (!strcmp(mode, "GRID")) imode = 2;
1318 TChain *chain = NULL;
1319 // Local chain
1320 switch (imode) {
1321 case 0:
1322 if (iAODanalysis) {
1323 if (!kLocalXMLDataset.Length()) {
1324 // Local AOD
1325 chain = new TChain("aodTree");
1326 TString line;
1327 ifstream in;
1328 in.open(kLocalDataList.Data());
1329 while (in.good()) {
1330 in >> line;
1331 if (line.Length() == 0) continue;
1332 // cout << " line = " << line << endl;
1333 chain->Add(line.Data());
1334 }
1335 } else {
1336 // Interactive AOD
1337 chain = CreateChainSingle(kLocalXMLDataset, "aodTree");
1338 }
1339 } else {
1340 if (!kLocalXMLDataset.Length()) {
1341 // Local ESD
1342 chain = new TChain("esdTree");
1343 TString line;
1344 ifstream in;
1345 in.open(kLocalDataList.Data());
1346 while (in.good()) {
1347 in >> line;
1348 if (line.Length() == 0) continue;
1349 cout << " line = " << line << endl;
1350 chain->Add(line.Data());
1351 }
1352 } else {
1353 // Interactive ESD
1354 chain = CreateChainSingle(kLocalXMLDataset, "esdTree");
1355 }
1356 }
1357 break;
1358 case 1:
1359 break;
1360 case 2:
1361 if (kPluginUse) {
1362// AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1363// AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1364 } else {
1365 TString treeName = "esdTree";
1366 if (iAODanalysis) treeName = "aodTree";
1367 chain = CreateChainSingle("wn.xml", treeName);
1368 }
1369 break;
1370 default:
1371 }
1372 if (chain && chain->GetNtrees()) return chain;
1373 return NULL;
1374}
1375
1376//______________________________________________________________________________
1377TChain* CreateChainSingle(const char* xmlfile, const char *treeName)
1378{
1379 printf("*******************************\n");
1380 printf("*** Getting the ESD Chain ***\n");
1381 printf("*******************************\n");
1382 TAlienCollection * myCollection = TAlienCollection::Open(xmlfile);
1383
1384 if (!myCollection) {
1385 ::Error("AnalysisTrainPWG4Jets.C::CreateChainSingle", "Cannot create an AliEn collection from %s", xmlfile) ;
1386 return NULL ;
1387 }
1388
1389 TChain* chain = new TChain(treeName);
1390 myCollection->Reset() ;
1391 while ( myCollection->Next() ) chain->Add(myCollection->GetTURL("")) ;
1392 chain->ls();
1393 return chain;
1394}
1395
1396//______________________________________________________________________________
1397Int_t SetupPar(char* pararchivename)
1398{
1399 if (!pararchivename || !strlen(pararchivename)) return -1;
1400 char processline[1024];
1401 if (gSystem->AccessPathName(Form("%s.par", pararchivename))) {
1402 if (!gSystem->AccessPathName(Form("%s/%s.par", gSystem->Getenv("ALICE_ROOT"),pararchivename))) {
1403 ::Info("AnalysisTrainPWG4Jets.C::SetupPar", "Getting %s.par from $ALICE_ROOT", pararchivename);
9748e967 1404 TFile::Cp(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", pararchivename)),
1405 Form("%s.par",pararchivename));
c38e3b95 1406 } else {
1407 ::Error("AnalysisTrainPWG4Jets.C::SetupPar", "Cannot find %s.par", pararchivename);
1408 return -1;
1409 }
1410 }
1411 if (kPluginUse && kSaveTrain) gSystem->Exec(Form("ln -s ../%s.par %s",pararchivename, kTrainName.Data()));
1412 gSystem->Exec(Form("tar xvzf %s.par", pararchivename));
1413
1414 TString ocwd = gSystem->WorkingDirectory();
1415 if (!gSystem->ChangeDirectory(pararchivename)) return -1;
1416
1417 // check for BUILD.sh and execute
1418 if (!gSystem->AccessPathName("PROOF-INF/BUILD.sh")) {
1419 printf("*******************************\n");
1420 printf("*** Building PAR archive ***\n");
1421 printf("*******************************\n");
1422 if (gSystem->Exec("PROOF-INF/BUILD.sh")) {
1423 Error("runProcess","Cannot Build the PAR Archive! - Abort!");
1424 return -1;
1425 }
1426 }
1427
1428 // check for SETUP.C and execute
1429 if (!gSystem->AccessPathName("PROOF-INF/SETUP.C")) {
1430 printf("*******************************\n");
1431 printf("*** Setup PAR archive ***\n");
1432 printf("*******************************\n");
1433 gROOT->Macro("PROOF-INF/SETUP.C");
1434 }
1435 if (!gSystem->ChangeDirectory(ocwd.Data())) return -1;
1436 return 0;
1437}
1438
1439//______________________________________________________________________________
1440AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode)
1441{
1442// Check if user has a valid token, otherwise make one. This has limitations.
1443// One can always follow the standard procedure of calling alien-token-init then
1444// source /tmp/gclient_env_$UID in the current shell.
c8fb37dd 1445// if (!AliAnalysisGrid::CreateToken()) return NULL;
c38e3b95 1446 AliAnalysisAlien *plugin = new AliAnalysisAlien();
1447// Set the run mode (can be "full", "test", "offline", "submit" or "terminate")
1448 plugin->SetRunMode(plugin_mode);
1449 if (kPluginUseProductionMode) plugin->SetProductionMode();
1450 plugin->SetJobTag(kJobTag);
e0c120d9 1451 plugin->SetNtestFiles(1);
c38e3b95 1452// plugin->SetPreferedSE("ALICE::NIHAM::File");
1453// Set versions of used packages
e84da0a5 1454 plugin->SetAPIVersion("V1.1x");
1455 // plugin->SetAPIVersion("V1.0x");
1456// plugin->SetAPIVersion("V2.4");
c38e3b95 1457 plugin->SetROOTVersion(kPluginRootVersion);
1458 plugin->SetAliROOTVersion(kPluginAliRootVersion);
1459// Declare input data to be processed.
1460// Method 1: Create automatically XML collections using alien 'find' command.
1461// Define production directory LFN
1462 plugin->SetGridDataDir(kGridDatadir.Data());
1463// Set data search pattern
1464 if (iAODanalysis) plugin->SetDataPattern(" *AliAOD.root");
c8fb37dd 1465 // else plugin->SetDataPattern(Form(" %s/*/*ESD.tag.root",kGridPassPattern.Data()));
1466 else plugin->SetDataPattern(Form(" %s/*/*AliESDs.root",kGridPassPattern.Data()));
c38e3b95 1467// ...then add run numbers to be considered
1468// plugin->SetRunRange(kGridRunRange[0], kGridRunRange[1]);
1469 for (Int_t i=kGridRunRange[0]; i<=kGridRunRange[1]; i++) {
1470 Printf("AnalysisTrainPWG4Jets Adding run number %s", Form(kGridRunPattern.Data(),i));
1471 plugin->AddRunNumber(Form(kGridRunPattern.Data(),i));
1472 }
1473
1474 if(kGridLocalRunList.Length()>0){
1475 ifstream in1;
1476 in1.open(kGridLocalRunList.Data());
1477 int iRun;
9a5c5b1e 1478
1479 /*
e84da0a5 1480 char c;
1481 char cLine[250];
1482 while(!in1.eof()){
1483 c = in1.get();
1484 if ( (c >= '0') && (c <= '9') )
1485 {
1486 in1.putback (c);
1487 in1>>iRun;
1488 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1489 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
1490 }
1491 else
1492 {
1493 in1.putback (c);
1494 in1.getline(cLine,250);
9a5c5b1e 1495
1496 }
1497 }
1498 */
9748e967 1499
1500 Int_t nRun = 0;
9a5c5b1e 1501
1502 // just use run numbers, negatives will be excluded
1503 while(in1>>iRun){
9748e967 1504
4d5d766e 1505 if(iRun>=0&&(nRun<kGridMaxRunsFromList)){
9a5c5b1e 1506 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1507 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
9748e967 1508 nRun++;
9a5c5b1e 1509 }
1510 else{
1511 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d", iRun);
e84da0a5 1512 }
c38e3b95 1513 }
1514 }
1515
1516// Method 2: Declare existing data files (raw collections, xml collections, root file)
1517// If no path mentioned data is supposed to be in the work directory (see SetGridWorkingDir())
1518// XML collections added via this method can be combined with the first method if
1519// the content is compatible (using or not tags)
1520// plugin->AddDataFile("tag.xml");
1521// plugin->AddDataFile("/alice/data/2008/LHC08c/000057657/raw/Run57657.Merged.RAW.tag.root");
1522// Define alien work directory where all files will be copied. Relative to alien $HOME.
3878a941 1523 TString alien_workdir = "";
1524
1525 if (iAODanalysis) alien_workdir += "analysisAOD";
1526 else alien_workdir += "analysisESD";
1527 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
1528 plugin->SetGridWorkingDir(alien_workdir.Data());
1529
c38e3b95 1530 // Declare alien output directory. Relative to working directory.
1531 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
1532 plugin->SetGridOutputDir(kGridOutdir);
1533
1534 // Add external packages
1535 if (iJETAN||iDIJETAN) {
23adcac8 1536 plugin->AddExternalPackage("boost::v1_43_0");
1537 plugin->AddExternalPackage("cgal::v3.6");
1538 plugin->AddExternalPackage("fastjet::v2.4.2");
c38e3b95 1539 }
1540
1541
1542 // set extra libs before par file compilation
1543 anaLibs += kGridExtraFiles;
1544 anaLibs = anaLibs.Strip();
e84da0a5 1545 Printf("anaLibs %s",anaLibs.Data());
1546 Printf("anaLibsExtra %s",anaLibsExtra.Data());
1547
1548 if (anaLibs.Length()) plugin->SetAdditionalLibs(anaLibs.Data());
1549 if (anaLibsExtra.Length()) plugin->SetAdditionalRootLibs(anaLibsExtra.Data());
c38e3b95 1550
1551 TString ana_sources = "";
1552 TString ana_add = "";
1553 if (kUsePAR && anaPars.Length()) {
1554 printf("%s\n", anaPars.Data());
1555 TObjArray *arr;
1556 TObjString *objstr;
1557 arr = anaPars.Tokenize(" ");
1558 TIter next(arr);
1559 while ((objstr=(TObjString*)next())) plugin->EnablePackage(objstr->GetString());
1560 delete arr;
1561 }
1562
1563// Declare the analysis source files names separated by blancs. To be compiled runtime
1564// using ACLiC on the worker nodes.
1565 ana_sources = anaSources.Strip();
1566// Declare all libraries (other than the default ones for the framework. These will be
1567// loaded by the generated analysis macro. Add all extra files (task .cxx/.h) here.
1568
1569 if (ana_sources.Length()) plugin->SetAnalysisSource(ana_sources);
1570 plugin->SetExecutableCommand(kPluginExecutableCommand.Data());
4721d8c5 1571 // Declare the output file names separated by blancs.
1572 // (can be like: file.root or file.root@ALICE::Niham::File)
c38e3b95 1573 plugin->SetMergeExcludes(kGridMergeExclude);
1574 plugin->SetMaxMergeFiles(kGridMaxMergeFiles);
1575 plugin->SetNrunsPerMaster(kGridRunsPerMaster);
9a5c5b1e 1576 plugin->SetMergeViaJDL(kPluginMergeViaJDL);
4721d8c5 1577 // Use fastread option
9a5c5b1e 1578 plugin->SetFastReadOption(kPluginFastReadOption);
4721d8c5 1579 // UseOverwrite mode
9a5c5b1e 1580 plugin->SetOverwriteMode(kPluginOverwriteMode);
4721d8c5 1581 // Optionally define the files to be archived.
1582 // plugin->SetOutputArchive("log_archive.zip:stdout,stderr@ALICE::NIHAM::File root_archive.zip:AliAOD.root,AOD.tag.root@ALICE::NIHAM::File");
dc6a7461 1583 plugin->SetOutputToRunNo(kPluginOutputToRunNumber); // write the output to subdirs named after run number
c38e3b95 1584
1585 // Put default output files to archive
1586 TString listhists = "";
1587 TString listaods = "";
1588 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1589 TIter next(mgr->GetOutputs());
1590 AliAnalysisDataContainer *output;
1591 while ((output=(AliAnalysisDataContainer*)next())) {
1592 const char *filename = output->GetFileName();
1593 if (!(strcmp(filename, "default"))) {
53c63663 1594 if (!mgr->GetOutputEventHandler()) continue;
c38e3b95 1595 filename = mgr->GetOutputEventHandler()->GetOutputFileName();
e84da0a5 1596 if (listaods.Length()) listaods += " ";
c38e3b95 1597 listaods += filename;
c38e3b95 1598 } else {
e84da0a5 1599 if(!listhists.Contains(filename)){
1600 if (listhists.Length()) listhists += " ";
c38e3b95 1601 listhists += filename;
1602 }
1603 }
1604 }
53c63663 1605
53c63663 1606 if (mgr->GetExtraFiles().Length()) {
e84da0a5 1607 if (listaods.Length()) listaods += " ";
53c63663 1608 listaods += mgr->GetExtraFiles();
c38e3b95 1609 }
53c63663 1610
1611 // if we do not fill the aod we do not need to store it
4721d8c5 1612 // kGridMergeExclude = listaods;
e84da0a5 1613
4721d8c5 1614 if(kSaveAOD!=0){
1615 TString outputFiles = "";
1616 outputFiles += mgr->GetExtraFiles();
1617 if (listhists.Length()) outputFiles += " ";
1618 outputFiles += listhists;
e84da0a5 1619 plugin->SetDefaultOutputs(kFALSE);
4721d8c5 1620 Printf("%s:%d Starting with the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
1621 // remove
1622 // no harm done when we try to remove something that is not there :)
1623 if(!(kSaveAOD&(1<<0))){
1624 outputFiles.ReplaceAll("AliAOD.root ","");
1625 listaods.ReplaceAll("AliAOD.root ","");
1626 }
1627 if(!(kSaveAOD&(1<<1))){
1628 if(kDeltaAODJetName.Length())outputFiles.ReplaceAll(kDeltaAODJetName.Data(),"");
1629 if(kDeltaAODJetName.Length())listaods.ReplaceAll(kDeltaAODJetName.Data(),"");
1630
1631 }
1632 if(!(kSaveAOD&(1<<2))){
1633 if(kDeltaAODPartCorrName.Length())outputFiles.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
1634 if(kDeltaAODPartCorrName.Length())listaods.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
1635 }
1636 if(!(kSaveAOD&(1<<3))){
1637 if(kDeltaAODJCORRANName.Length())outputFiles.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
1638 if(kDeltaAODJCORRANName.Length())listaods.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
1639 }
1640
1641 //
1642 Printf("%s:%d Saving the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
1643 plugin->SetOutputFiles(outputFiles.Data());
e84da0a5 1644 }
53c63663 1645
4721d8c5 1646 TString outputArchive;
4d5d766e 1647 outputArchive = Form("log_archive.zip:std*@%s","disk=1");
e84da0a5 1648 listaods.ReplaceAll(" ", ",");
1649 listhists.ReplaceAll(" ", ",");
4d5d766e 1650 if (listhists.Length()){
1651 outputArchive += " ";
1652 outputArchive += "root_archive.zip:";
1653 outputArchive += listhists;
1654 if (listaods.Length()){
1655 outputArchive += ",";
1656 outputArchive += listaods;
1657 }
1658 outputArchive += Form("@%s", kGridOutputStorages.Data());
1659 }
1660 else{
1661
1662 if (listaods.Length()){
1663 // we have only aod'ish output
1664 outputArchive += " ";
1665 outputArchive += "root_archive.zip:";
1666 outputArchive += listaods;
1667 outputArchive += Form("@%s", kGridOutputStorages.Data());
1668 }
1669 else{
1670 // no other outputs than std..
c38e3b95 1671 ::Fatal("AnalysisTrainPWG4Jets", "No task output !");
4d5d766e 1672 }
c38e3b95 1673 }
4d5d766e 1674
17d96675 1675 plugin->SetDefaultOutputs(kFALSE);
c38e3b95 1676 plugin->SetOutputArchive(outputArchive);
17d96675 1677
4721d8c5 1678
4d5d766e 1679 // Optionally set a name for the generated analysis macro (default MyAnalysis.C)
c38e3b95 1680 plugin->SetAnalysisMacro(Form("%s.C", kTrainName.Data()));
4d5d766e 1681 // Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)
c38e3b95 1682 plugin->SetSplitMaxInputFileNumber(kGridFilesPerJob);
4d5d766e 1683 // Optionally set number of failed jobs that will trigger killing waiting sub-jobs.
1684 plugin->SetMaxInitFailed(5);
1685 // Optionally resubmit threshold.
c8fb37dd 1686 // plugin->SetMasterResubmitThreshold(90);
4d5d766e 1687 // Optionally set time to live (default 30000 sec)
17d96675 1688 plugin->SetTTL(50400); // 14h...
4d5d766e 1689 // Optionally set input format (default xml-single)
c38e3b95 1690 plugin->SetInputFormat("xml-single");
4d5d766e 1691 // Optionally modify the name of the generated JDL (default analysis.jdl)
c38e3b95 1692 plugin->SetJDLName(Form("%s.jdl", kTrainName.Data()));
4d5d766e 1693 // Optionally modify the executable name (default analysis.sh)
c38e3b95 1694 plugin->SetExecutable(Form("%s.sh", kTrainName.Data()));
4d5d766e 1695 // Optionally modify job price (default 1)
c38e3b95 1696 plugin->SetPrice(1);
4d5d766e 1697 // Optionally modify split mode (default 'se')
c38e3b95 1698 plugin->SetSplitMode("se");
1699 return plugin;
1700}
1701
1702//______________________________________________________________________________
1703void WriteConfig()
1704{
1705// Write train configuration in a file. The file name has the format:
1706// train_[trainName]_ddMonthyyyy_time.C
1707 if (kUseDate) {
1708 gSystem->Exec("date +%d%b%Y_%Hh%M > date.tmp");
1709 ifstream fdate("date.tmp");
1710 if (!fdate.is_open()) {
1711 ::Error("AnalysisTrainPWG4Jets.C::Export","Could not generate file name");
1712 return;
1713 }
1714 const char date[64];
1715 fdate.getline(date,64);
1716 fdate.close();
1717 gSystem->Exec("rm date.tmp");
1718 kTrainName = Form("train_%s_%s", kTrainName.Data(), date);
1719 } else {
1720 kTrainName = Form("train_%s", kTrainName.Data());
1721 }
1722 TString cdir = gSystem->WorkingDirectory();
1723 gSystem->MakeDirectory(kTrainName);
1724 gSystem->ChangeDirectory(kTrainName);
1725 ofstream out;
1726 out.open(Form("%sConfig.C",kTrainName.Data()), ios::out);
1727 if (out.bad()) {
1728 ::Error("AnalysisTrainPWG4Jets.C::Export", "Cannot open ConfigTrain.C for writing");
1729 return;
1730 }
1731 out << "{" << endl;
1732 out << " kTrainName = " << "\"" << kTrainName.Data() << "\";" << endl;
1733 out << " kProofCluster = " << "\"" << kProofCluster.Data() << "\";" << endl;
1734 out << " kProofUseAFPAR = " << kProofUseAFPAR << ";" << endl;
1735 if (kProofUseAFPAR)
1736 out << " kProofAFversion = " << kProofAFversion.Data() << ";" << endl;
1737 out << " kProofDataSet = " << "\"" << kProofDataSet.Data() << "\";" << endl;
1738 out << " kPluginUse = " << kPluginUse << ";" << endl;
1739 out << " kUsePAR = " << kUsePAR << ";" << endl;
1740 out << " kUseCPAR = " << kUseCPAR << ";" << endl;
1741 out << " kPluginRootVersion = " << "\"" << kPluginRootVersion.Data() << "\";" << endl;
1742 out << " kPluginAliRootVersion = " << "\"" << kPluginAliRootVersion.Data() << "\";" << endl;
1743 out << " kGridDatadir = " << "\"" << kGridDatadir.Data() << "\";" << endl;
1744 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
1745 out << " kGridOutdir = " << "\"" << kGridOutdir.Data() << "\";" << endl;
1746 out << " kGridMaxMergeFiles = " << kGridMaxMergeFiles << ";" << endl;
1747 out << " kGridMergeExclude = " << "\"" << kGridMergeExclude.Data() << "\";" << endl;
1748 out << " kGridRunsPerMaster = " << kGridRunsPerMaster << ";" << endl;
1749 out << " kGridFilesPerJob = " << kGridFilesPerJob << ";" << endl;
1750 out << " kGridRunRange[0] = " << kGridRunRange[0] << ";" << endl;
1751 out << " kGridRunRange[1] = " << kGridRunRange[1] << ";" << endl;
1752 out << " kUseDebug = " << kUseDebug << ";" << endl;
1753 out << " kUseMC = " << kUseMC << ";" << endl;
1754 out << " kUseESDTags = " << kUseESDTags << ";" << endl;
1755 out << " kUseKinefilter = " << kUseKinefilter << ";" << endl;
1756 out << " kUseTR = " << kUseTR << ";" << endl;
1757 out << " kUseAODTags = " << kUseAODTags << ";" << endl;
1758 out << " kSaveTrain = " << "kFALSE;" << endl << endl;
1759 out << " // Analysis modules" << endl;
1760 out << " iAODanalysis = " << iAODanalysis << ";" << endl;
1761 out << " iAODhandler = " << iAODhandler << ";" << endl;
1762 out << " iESDfilter = " << iESDfilter << ";" << endl;
1763 out << " iJETAN = " << iJETAN << ";" << endl;
1764 out << "// Configuration fot the wagons" << endl;
1765 out << "}" << endl;
1766 ::Info("AnalysisTrainPWG4Jets.C::WriteConfig", "Train configuration wrote to file %s", Form("config_%s.C", kTrainName.Data()));
1767 gSystem->ChangeDirectory(cdir);
1768}
1769
1770//______________________________________________________________________________
1771Bool_t LoadConfig(const char *filename)
1772{
1773// Read train configuration from file
1774 if (gSystem->AccessPathName(filename)) {
1775 ::Error("AnalysisTrainPWG4Jets.C::LoadConfig", "Config file name not found");
1776 return kFALSE;
1777 }
1778 gROOT->ProcessLine(Form(".x %s", filename));
1779 ::Info("AnalysisTrainPWG4Jets.C::LoadConfig", "Train configuration loaded from file %s", filename);
1780 return kTRUE;
1781}
1782
1783Bool_t PatchJDL(){
1784 Printf(">>> Patching JDL");
1785 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1786 AliAnalysisAlien* gridHandler = (AliAnalysisAlien*)mgr->GetGridHandler();
1787 TGridJDL *jdl = gridHandler->GetGridJDL();
1788 if(iJETAN)jdl->AddToPackages("fastjet","v2.4.0");
1789 gridHandler->WriteJDL(kFALSE);
0971dabc 1790 Printf("<<< Patching JDL");
c38e3b95 1791 return kTRUE;
1792}
1793
1794Bool_t PatchAnalysisMacro(){
4721d8c5 1795 Printf(">>> Patching AnalysisMacro");
1796 gSystem->Exec(Form("mv %s.C %s.C_tmp",kTrainName.Data(),kTrainName.Data()));
c38e3b95 1797
1798 ifstream in1;
1799 in1.open(Form("%s.C_tmp", kTrainName.Data()));
1800 char cLine[250];
1801 TString st;
1802 while(in1.getline(cLine,250)){
1803 st += cLine;
1804 st += "\n";
1805 }
4721d8c5 1806 Int_t index= -1;
c38e3b95 1807 index = st.Index("gSystem->Load(\"libPhysics\");");
1808 index += strlen("gSystem->Load(\"libPhysics\");");
4721d8c5 1809 /*
c38e3b95 1810 TObjArray *arr;
1811 TObjString *objstr;
1812 arr = anaLibs.Tokenize(" ");
1813 TIter next(arr);
4721d8c5 1814
c38e3b95 1815 add += "\n\n // added by CKB \n";
1816 while ((objstr=(TObjString*)next())){
e84da0a5 1817 if(objstr->GetString().Contains("PWG3"))continue;
c38e3b95 1818 if(objstr->GetString().EndsWith(".so"))add += Form("gSystem->Load(\"%s\");\n",objstr->GetString().Data());
1819 }
1820 delete arr;
4721d8c5 1821 */
3878a941 1822 // add += Form("AliLog::SetGlobalLogLevel(%d);\n",AliLog::GetGlobalLogLevel());
4721d8c5 1823 TString add = "";
1824
1825 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1826 add += "\n\n // added by CKB \n";
46534866 1827 if(kErrorIgnoreLevel>0)add += Form("gErrorIgnoreLevel = %d;\n",kErrorIgnoreLevel);
23adcac8 1828 add += "\n gSystem->AddIncludePath(\"./\"); \n";
4721d8c5 1829 if(gGrid&&kPluginAliRootVersion.Length()==0){
1830 add += "\n // Dirty hack for TRD reference data \n";
1831 add += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
1832 add += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
1833 add += "\"); \n";
c38e3b95 1834 }
4721d8c5 1835 add += "// BKC \n\n";
1836 st.Insert(index,add.Data());
e84da0a5 1837
1838 if(kUseDebug){
23adcac8 1839 // st.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
e84da0a5 1840 }
1841
4721d8c5 1842 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
1843 index = st.Index("gSystem->AddIncludePath(\"-I$"); // uncommen $ALICE_ROOT include for par files
1844 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1845 st.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
1846 }
c166d299 1847
46534866 1848 if(AliLog::GetGlobalLogLevel()==AliLog::kFatal){
1849 index = st.Index("AliLog::SetGlobal"); // ncomment setting of log level, do my own
1850 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1851 st.Insert(index,"AliLog::SetGlobalLogLevel(AliLog::kFatal);// CKB \n // CKB comment out for own setting \n //");
1852 }
1853
c38e3b95 1854 ofstream out;
1855 out.open(Form("%s.C", kTrainName.Data()));
1856 if (out.bad()) {
1857 return kFALSE;
1858 }
1859 out << st << endl;
1860 Printf("<<< Patching AnalysisMacro");
4721d8c5 1861
1862
1863
1864
1865
1866 Printf(">>> Patching Merge Macro");
1867 gSystem->Exec(Form("mv %s_merge.C %s_merge.C_tmp",kTrainName.Data(),kTrainName.Data()));
1868
1869 ifstream in2;
1870 in2.open(Form("%s_merge.C_tmp", kTrainName.Data()));
1871 TString st2;
1872 while(in2.getline(cLine,250)){
1873 st2 += cLine;
1874 st2 += "\n";
1875 }
1876 index = st2.Index("gSystem->Load(\"libPhysics\");");
1877 index += strlen("gSystem->Load(\"libPhysics\");");
1878 TString add2 = "";
23adcac8 1879 add2 += "\n gSystem->AddIncludePath(\"./\"); \n";
4721d8c5 1880 if(gGrid&&kPluginAliRootVersion.Length()==0){
1881 add2 += "\n // Dirty hack for TRD reference data \n";
1882 add2 += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
1883 add2 += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
1884 add2 += "\"); \n";
1885 }
1886 add2 += "// BKC \n\n";
1887 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1888 st2.Insert(index,add.Data());
1889
1890
1891 if(kUseDebug){
23adcac8 1892 // st2.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
4721d8c5 1893 }
1894
1895 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
46534866 1896 index = st2.Index("gSystem->AddIncludePath(\"-I$"); // uncomment $ALICE_ROOT include for par files
4721d8c5 1897 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1898 st2.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
1899 }
1900
1901 // do not exclude the extra files from merign, this is done explicitly in this train script
1902 index = st2.Index("mergeExcludes +="); // uncommen $ALICE_ROOT include for par files
1903 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1904 st2.Insert(index,"// CKB comment out, handled explicitly by the train macro \n //");
1905
1906
1907 ofstream out2;
1908 out2.open(Form("%s_merge.C", kTrainName.Data()));
1909 if (out2.bad()) {
1910 return kFALSE;
1911 }
1912 out2 << st2 << endl;
1913 Printf("<<< Patching Merging Macro");
1914
1915
1916
c38e3b95 1917 return kTRUE;
1918
1919}