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ffb1ee30 | 1 | /************************************************************************** |
2 | * Copyright(c) 1998-1999, ALICE Experiment at CERN, All rights reserved. * | |
3 | * * | |
4 | * Author: The ALICE Off-line Project. * | |
5 | * Contributors are mentioned in the code where appropriate. * | |
6 | * * | |
7 | * Permission to use, copy, modify and distribute this software and its * | |
8 | * documentation strictly for non-commercial purposes is hereby granted * | |
9 | * without fee, provided that the above copyright notice appears in all * | |
10 | * copies and that both the copyright notice and this permission notice * | |
11 | * appear in the supporting documentation. The authors make no claims * | |
12 | * about the suitability of this software for any purpose. It is * | |
13 | * provided "as is" without express or implied warranty. * | |
14 | **************************************************************************/ | |
15 | // | |
16 | // PID Response class for the TRD detector | |
17 | // Based on 1D Likelihood approach | |
18 | // Calculation of probabilities using Bayesian approach | |
19 | // Attention: This method is only used to separate electrons from pions | |
20 | // | |
21 | // Authors: | |
22 | // Markus Fasel <M.Fasel@gsi.de> | |
23 | // Anton Andronic <A.Andronic@gsi.de> | |
24 | // | |
ffb1ee30 | 25 | #include <TAxis.h> |
ea235c90 | 26 | #include <TClass.h> |
27 | #include <TDirectory.h> | |
ffb1ee30 | 28 | #include <TFile.h> |
29 | #include <TH1.h> | |
ce5d6908 | 30 | #include <TKey.h> |
ea235c90 | 31 | #include <TMath.h> |
ffb1ee30 | 32 | #include <TObjArray.h> |
ce5d6908 | 33 | #include <TROOT.h> |
ea235c90 | 34 | #include <TString.h> |
ffb1ee30 | 35 | #include <TSystem.h> |
36 | ||
37 | #include "AliLog.h" | |
38 | ||
db0e2c5f | 39 | #include "AliTRDPIDResponseObject.h" |
ffb1ee30 | 40 | #include "AliTRDPIDResponse.h" |
db0e2c5f | 41 | #include "AliTRDTKDInterpolator.h" |
ffb1ee30 | 42 | |
43 | ClassImp(AliTRDPIDResponse) | |
44 | ||
ffb1ee30 | 45 | //____________________________________________________________ |
e0de37e9 | 46 | AliTRDPIDResponse::AliTRDPIDResponse(): |
47 | TObject() | |
db0e2c5f | 48 | ,fkPIDResponseObject(NULL) |
e0de37e9 | 49 | ,fGainNormalisationFactor(1.) |
ffb1ee30 | 50 | { |
e0de37e9 | 51 | // |
52 | // Default constructor | |
53 | // | |
ffb1ee30 | 54 | } |
55 | ||
56 | //____________________________________________________________ | |
57 | AliTRDPIDResponse::AliTRDPIDResponse(const AliTRDPIDResponse &ref): | |
e0de37e9 | 58 | TObject(ref) |
db0e2c5f | 59 | ,fkPIDResponseObject(NULL) |
e0de37e9 | 60 | ,fGainNormalisationFactor(ref.fGainNormalisationFactor) |
ffb1ee30 | 61 | { |
e0de37e9 | 62 | // |
63 | // Copy constructor | |
e0de37e9 | 64 | // |
ffb1ee30 | 65 | } |
66 | ||
67 | //____________________________________________________________ | |
68 | AliTRDPIDResponse &AliTRDPIDResponse::operator=(const AliTRDPIDResponse &ref){ | |
e0de37e9 | 69 | // |
70 | // Assignment operator | |
e0de37e9 | 71 | // |
72 | if(this == &ref) return *this; | |
73 | ||
74 | // Make copy | |
75 | TObject::operator=(ref); | |
51a0ce25 | 76 | fGainNormalisationFactor = ref.fGainNormalisationFactor; |
db0e2c5f | 77 | fkPIDResponseObject = ref.fkPIDResponseObject; |
e0de37e9 | 78 | |
79 | return *this; | |
ffb1ee30 | 80 | } |
81 | ||
82 | //____________________________________________________________ | |
83 | AliTRDPIDResponse::~AliTRDPIDResponse(){ | |
e0de37e9 | 84 | // |
85 | // Destructor | |
86 | // | |
db0e2c5f | 87 | if(IsOwner()) delete fkPIDResponseObject; |
ffb1ee30 | 88 | } |
89 | ||
90 | //____________________________________________________________ | |
db0e2c5f | 91 | Bool_t AliTRDPIDResponse::Load(const Char_t * filename){ |
e0de37e9 | 92 | // |
93 | // Load References into the toolkit | |
94 | // | |
95 | AliDebug(1, "Loading reference histos from root file"); | |
2ad33025 | 96 | TDirectory *owd = gDirectory;// store old working directory |
e0de37e9 | 97 | |
98 | if(!filename) | |
99 | filename = Form("%s/STEER/LQ1dRef_v1.root",gSystem->ExpandPathName("$ALICE_ROOT")); | |
100 | TFile *in = TFile::Open(filename); | |
101 | if(!in){ | |
102 | AliError("Ref file not available."); | |
103 | return kFALSE; | |
104 | } | |
105 | ||
106 | gROOT->cd(); | |
db0e2c5f | 107 | fkPIDResponseObject = dynamic_cast<const AliTRDPIDResponseObject *>(in->Get("TRDPIDResponse")->Clone()); |
51a0ce25 | 108 | in->Close(); delete in; |
e0de37e9 | 109 | owd->cd(); |
e0de37e9 | 110 | SetBit(kIsOwner, kTRUE); |
db0e2c5f | 111 | AliDebug(2, Form("Successfully loaded References for %d Momentum bins", fkPIDResponseObject->GetNumberOfMomentumBins())); |
e0de37e9 | 112 | return kTRUE; |
ffb1ee30 | 113 | } |
114 | ||
115 | //____________________________________________________________ | |
bd58d4b9 | 116 | Bool_t AliTRDPIDResponse::GetResponse(Int_t n, const Double_t * const dedx, const Float_t * const p, Double_t prob[AliPID::kSPECIES],ETRDPIDMethod PIDmethod,Bool_t kNorm) const |
ffb1ee30 | 117 | { |
e0de37e9 | 118 | // |
119 | // Calculate TRD likelihood values for the track based on dedx and | |
120 | // momentum values. The likelihoods are calculated by query the | |
121 | // reference data depending on the PID method selected | |
122 | // | |
123 | // Input parameter : | |
124 | // n - number of dedx slices/chamber | |
125 | // dedx - array of dedx slices organized layer wise | |
126 | // p - array of momentum measurements organized layer wise | |
127 | // | |
128 | // Return parameters | |
129 | // prob - probabilities allocated by TRD for particle specis | |
130 | // kNorm - switch to normalize probabilities to 1. By default true. If false return not normalized prob. | |
131 | // | |
132 | // Return value | |
133 | // true if calculation success | |
bd58d4b9 | 134 | // |
135 | AliDebug(3,Form(" Response for PID method: %d",PIDmethod)); | |
136 | ||
ffb1ee30 | 137 | |
db0e2c5f | 138 | if(!fkPIDResponseObject){ |
139 | AliWarning("Missing reference data. PID calculation not possible."); | |
140 | return kFALSE; | |
141 | } | |
ffb1ee30 | 142 | |
db0e2c5f | 143 | for(Int_t is(AliPID::kSPECIES); is--;) prob[is]=.2; |
144 | Double_t prLayer[AliPID::kSPECIES]; | |
145 | Double_t dE[10], s(0.); | |
146 | for(Int_t il(kNlayer); il--;){ | |
147 | memset(prLayer, 0, AliPID::kSPECIES*sizeof(Double_t)); | |
bd58d4b9 | 148 | if(!CookdEdx(n, &dedx[il*n], &dE[0],PIDmethod)) continue; |
ffb1ee30 | 149 | |
db0e2c5f | 150 | s=0.; |
151 | Bool_t filled=kTRUE; | |
152 | for(Int_t is(AliPID::kSPECIES); is--;){ | |
bd58d4b9 | 153 | if((PIDmethod==kLQ2D)&&(!(is==0||is==2)))continue; |
154 | if((dE[0] > 0.) && (p[il] > 0.)) prLayer[is] = GetProbabilitySingleLayer(is, p[il], &dE[0],PIDmethod); | |
f2762b1c | 155 | AliDebug(3, Form("Probability for Species %d in Layer %d: %e", is, il, prLayer[is])); |
db0e2c5f | 156 | if(prLayer[is]<1.e-30){ |
157 | AliDebug(2, Form("Null for species %d species prob layer[%d].",is,il)); | |
158 | filled=kFALSE; | |
159 | break; | |
160 | } | |
161 | s+=prLayer[is]; | |
162 | } | |
163 | if(!filled){ | |
164 | continue; | |
165 | } | |
166 | if(s<1.e-30){ | |
167 | AliDebug(2, Form("Null all species prob layer[%d].", il)); | |
168 | continue; | |
169 | } | |
170 | for(Int_t is(AliPID::kSPECIES); is--;){ | |
171 | if(kNorm) prLayer[is] /= s; | |
172 | prob[is] *= prLayer[is]; | |
173 | } | |
e0de37e9 | 174 | } |
db0e2c5f | 175 | if(!kNorm) return kTRUE; |
176 | ||
177 | s=0.; | |
178 | for(Int_t is(AliPID::kSPECIES); is--;) s+=prob[is]; | |
e0de37e9 | 179 | if(s<1.e-30){ |
db0e2c5f | 180 | AliDebug(2, "Null total prob."); |
181 | return kFALSE; | |
e0de37e9 | 182 | } |
db0e2c5f | 183 | for(Int_t is(AliPID::kSPECIES); is--;) prob[is]/=s; |
184 | return kTRUE; | |
ffb1ee30 | 185 | } |
186 | ||
ffb1ee30 | 187 | //____________________________________________________________ |
bd58d4b9 | 188 | Double_t AliTRDPIDResponse::GetProbabilitySingleLayer(Int_t species, Double_t plocal, Double_t *dEdx,ETRDPIDMethod PIDmethod) const { |
e0de37e9 | 189 | // |
190 | // Get the non-normalized probability for a certain particle species as coming | |
191 | // from the reference histogram | |
192 | // Interpolation between momentum bins | |
193 | // | |
194 | AliDebug(1, Form("Make Probability for Species %d with Momentum %f", species, plocal)); | |
db0e2c5f | 195 | |
51a0ce25 | 196 | Double_t probLayer = 0.; |
db0e2c5f | 197 | Float_t pLower, pUpper; |
198 | ||
bd58d4b9 | 199 | switch(PIDmethod){ |
db0e2c5f | 200 | case kNN: // NN |
201 | break; | |
202 | case kLQ2D: // 2D LQ | |
203 | { | |
f2762b1c | 204 | if(species==0||species==2){ // references only for electrons and pions |
205 | Double_t error; | |
206 | Double_t point[kNslicesLQ2D]; | |
207 | for(Int_t idim=0;idim<kNslicesLQ2D;idim++){point[idim]=dEdx[idim];} | |
db0e2c5f | 208 | |
f2762b1c | 209 | AliTRDTKDInterpolator *refLower = dynamic_cast<AliTRDTKDInterpolator*>(fkPIDResponseObject->GetLowerReference((AliPID::EParticleType)species, plocal, pLower,kLQ2D)); |
db0e2c5f | 210 | |
f2762b1c | 211 | if(refLower){ |
212 | refLower->Eval(point,probLayer,error); | |
213 | } | |
214 | else { | |
215 | AliError("No references available"); | |
216 | } | |
217 | AliDebug(2,Form("Eval 2D Q0 %f Q1 %f P %e Err %e",point[0],point[1],probLayer,error)); | |
db0e2c5f | 218 | } |
219 | } | |
220 | break; | |
221 | case kLQ1D: // 1D LQ | |
222 | { | |
223 | TH1 *refUpper = dynamic_cast<TH1 *>(fkPIDResponseObject->GetUpperReference((AliPID::EParticleType)species, plocal, pUpper,kLQ1D)), | |
224 | *refLower = dynamic_cast<TH1 *>(fkPIDResponseObject->GetLowerReference((AliPID::EParticleType)species, plocal, pLower,kLQ1D)); | |
225 | // Do Interpolation exept for underflow and overflow | |
226 | if(refLower && refUpper){ | |
227 | Double_t probLower = refLower->GetBinContent(refLower->GetXaxis()->FindBin(dEdx[0])); | |
228 | Double_t probUpper = refUpper->GetBinContent(refUpper->GetXaxis()->FindBin(dEdx[0])); | |
229 | ||
230 | probLayer = probLower + (probUpper - probLower)/(pUpper-pLower) * (plocal - pLower); | |
231 | } else if(refLower){ | |
232 | // underflow | |
233 | probLayer = refLower->GetBinContent(refLower->GetXaxis()->FindBin(dEdx[0])); | |
234 | } else if(refUpper){ | |
235 | // overflow | |
236 | probLayer = refUpper->GetBinContent(refUpper->GetXaxis()->FindBin(dEdx[0])); | |
237 | } else { | |
238 | AliError("No references available"); | |
239 | } | |
f2762b1c | 240 | AliDebug(1, Form("Eval 1D dEdx %f Probability %e", dEdx[0],probLayer)); |
db0e2c5f | 241 | } |
242 | break; | |
243 | default: | |
244 | break; | |
e0de37e9 | 245 | } |
51a0ce25 | 246 | return probLayer; |
ffb1ee30 | 247 | } |
248 | ||
249 | //____________________________________________________________ | |
250 | void AliTRDPIDResponse::SetOwner(){ | |
e0de37e9 | 251 | // |
252 | // Make Deep Copy of the Reference Histograms | |
253 | // | |
db0e2c5f | 254 | if(!fkPIDResponseObject || IsOwner()) return; |
255 | const AliTRDPIDResponseObject *tmp = fkPIDResponseObject; | |
256 | fkPIDResponseObject = dynamic_cast<const AliTRDPIDResponseObject *>(tmp->Clone()); | |
257 | SetBit(kIsOwner, kTRUE); | |
ffb1ee30 | 258 | } |
259 | ||
260 | //____________________________________________________________ | |
bd58d4b9 | 261 | Bool_t AliTRDPIDResponse::CookdEdx(Int_t nSlice, const Double_t * const in, Double_t *out,ETRDPIDMethod PIDmethod) const |
ffb1ee30 | 262 | { |
f2762b1c | 263 | // |
264 | // Recalculate dE/dx | |
265 | // | |
bd58d4b9 | 266 | switch(PIDmethod){ |
e0de37e9 | 267 | case kNN: // NN |
db0e2c5f | 268 | break; |
269 | case kLQ2D: // 2D LQ | |
270 | out[0]=0; | |
271 | out[1]=0; | |
272 | for(Int_t islice = 0; islice < nSlice; islice++){ | |
273 | if(islice<fkPIDResponseObject->GetNSlicesQ0())out[0]+= in[islice]; | |
274 | else out[1]+= in[islice]; | |
275 | } | |
f2762b1c | 276 | if(out[0] < 1e-6) return kFALSE; |
277 | AliDebug(3,Form("CookdEdx Q0 %f Q1 %f",out[0],out[1])); | |
db0e2c5f | 278 | break; |
279 | case kLQ1D: // 1D LQ | |
280 | out[0]= 0.; | |
281 | for(Int_t islice = 0; islice < nSlice; islice++) | |
282 | if(in[islice] > 0) out[0] += in[islice] * fGainNormalisationFactor; // Protect against negative values for slices having no dE/dx information | |
283 | if(out[0] < 1e-6) return kFALSE; | |
f2762b1c | 284 | AliDebug(3,Form("CookdEdx dEdx %f",out[0])); |
db0e2c5f | 285 | break; |
286 | ||
e0de37e9 | 287 | default: |
db0e2c5f | 288 | return kFALSE; |
e0de37e9 | 289 | } |
290 | return kTRUE; | |
ffb1ee30 | 291 | } |
292 | ||
ea235c90 | 293 | //____________________________________________________________ |
bd58d4b9 | 294 | Bool_t AliTRDPIDResponse::IdentifiedAsElectron(Int_t nTracklets, const Double_t *like, Double_t p, Double_t level,Double_t centrality,ETRDPIDMethod PIDmethod) const { |
db0e2c5f | 295 | // |
296 | // Check whether particle is identified as electron assuming a certain electron efficiency level | |
297 | // Only electron and pion hypothesis is taken into account | |
298 | // | |
299 | // Inputs: | |
300 | // Number of tracklets | |
301 | // Likelihood values | |
302 | // Momentum | |
303 | // Electron efficiency level | |
304 | // | |
305 | // If the function fails when the params are not accessible, the function returns true | |
306 | // | |
307 | if(!fkPIDResponseObject){ | |
ea235c90 | 308 | AliError("No PID Param object available"); |
309 | return kTRUE; | |
310 | } | |
311 | Double_t probEle = like[AliPID::kElectron]/(like[AliPID::kElectron] + like[AliPID::kPion]); | |
ce487a7f | 312 | Double_t params[4]; |
bd58d4b9 | 313 | if(!fkPIDResponseObject->GetThresholdParameters(nTracklets, level, params,centrality,PIDmethod)){ |
ea235c90 | 314 | AliError("No Params found for the given configuration"); |
315 | return kTRUE; | |
316 | } | |
ce487a7f | 317 | Double_t threshold = 1. - params[0] - params[1] * p - params[2] * TMath::Exp(-params[3] * p); |
ea235c90 | 318 | if(probEle > TMath::Max(TMath::Min(threshold, 0.99), 0.2)) return kTRUE; // truncate the threshold upperwards to 0.999 and lowerwards to 0.2 and exclude unphysical values |
319 | return kFALSE; | |
320 | } | |
321 | ||
f2762b1c | 322 | //____________________________________________________________ |
323 | Bool_t AliTRDPIDResponse::SetPIDResponseObject(const AliTRDPIDResponseObject * obj){ | |
324 | ||
325 | fkPIDResponseObject = obj; | |
326 | if((AliLog::GetDebugLevel("",IsA()->GetName()))>0)fkPIDResponseObject->Print(""); | |
327 | return kTRUE; | |
328 | } |