Fix Coverity defects
[u/mrichter/AliRoot.git] / PWG4 / macros / AnalysisTrainPWG4Jets.C
CommitLineData
c38e3b95 1//===================== ANALYSIS TRAIN =========================================
2// To use: copy this macro to your work directory, modify the global part to match
3// your needs, then run root.
4// root[0] .L AnalysisTrain.C
5// Grid full mode as below (other modes: test, offline, submit, terminate)
121e4bd5 6// root[1] AnalysisTrainPWG-244Jets("grid", "full")
c38e3b95 7// CAF mode (requires root v5-23-02 + aliroot v4-16-Rev08)
8// root[2] AnalysisTrainPWG4Jets("proof")
9// Local mode requires AliESds.root or AliAOD.root in ./data directory
10// root[3] AnalysisTrainPWG4Jets("local")
11// In proof and grid modes, a token is needed and sourcing the produced environment file.
12//
13// If 'saveTrain' flag is set, the train will generate a directory name and run
14// in this directory. A configuration file 'ConfigTrain.C' will be generated.
15// One can replay at any time the train via:
16// root[1] AnalysisTrainPWG4Jets(ana_mode, plugin_mode, "train_default_<date>/ConfigTrain.C")
17
18// For Usage with fastjet run in "offline" first and then "submit"
19// jdl and analysismacro are automatically patched after "offline" mode
20
21// =============================================================================
22// ### General Steering variables
23// =============================================================================
24//== general setup variables
25TString kTrainName = "testAnalysis"; // *CHANGE ME* (no blancs or special characters)
26TString kJobTag = "PWG4 Jet Tasks analysis train configured"; // *CHANGE ME*
27
28// Usage of par files ONLY in grid mode and ONLY if the code is not available
29// in the deployed AliRoot versions. Par file search path: local dir, if not there $ALICE_ROOT.
30// To refresh par files, remove the ones in the workdir, then do "make <target.par>" in
31// AliRoot.
32Bool_t kUsePAR = kFALSE; // use par files for extra libs
33Bool_t kUseCPAR = kFALSE; // use par files for common libs
34Bool_t kFillAOD = kFALSE; // switch of AOD filling for on the fly analysis
4721d8c5 35Int_t kSaveAOD = 8; // Bit switch 1 = Full AOD 2 = Jet AOD , 4 = PartCorr, 8 = JCORRAN
c38e3b95 36//== general input and output variables
9a5c5b1e 37
c38e3b95 38Int_t iAODanalysis = 1; // Analysis on input AOD's
39Int_t iAODhandler = 1; // Analysis produces an AOD or dAOD's
40Int_t iESDfilter = 0; // ESD to AOD filter (barrel + muon tracks)
e84da0a5 41Int_t iPhysicsSelection = 1; // ESD to AOD filter (barrel + muon tracks)
cfd02305 42Bool_t useTender = kFALSE; // use tender wagon
c38e3b95 43Bool_t kUseKinefilter = kFALSE; // use Kinematics filter
44Bool_t kUseMuonfilter = kFALSE; // use Kinematics filter
45TString kCommonOutputFileName = "PWG4_JetTasksOutput.root";
9748e967 46TString kCaloQAOutputFileName = "PWG4_CaloQAOutput.root";
c38e3b95 47
48
49//== general process variables
50
51// ### Other flags to steer the analysis
52//==============================================================================
9a5c5b1e 53Bool_t kSkipTerminate = kTRUE; // Do not call Teminate
c38e3b95 54Bool_t kUseDate = kFALSE; // use date in train name
55Bool_t kUseDebug = kTRUE; // activate debugging
46534866 56Int_t kErrorIgnoreLevel = -1; // takes the errror print level from .rootrc
57// From TError.h:
58// const Int_t kUnset = -1;
59// const Int_t kPrint = 0;
60// const Int_t kInfo = 1000;
61// const Int_t kWarning = 2000;
62// const Int_t kError = 3000;
63// const Int_t kBreak = 4000;
64// const Int_t kSysError = 5000;
65// const Int_t kFatal = 6000;
66Int_t kUseSysInfo = 0; // activate debugging
ebad39a9 67Long64_t kNumberOfEvents = 1234567890; // number of events to process from the chain
c38e3b95 68Bool_t kUseMC = kTRUE; // use MC info
69Bool_t kIsMC = kTRUE; // is MC info, if false it overwrites Use(AOD)MC
70Bool_t kUseAODMC = kTRUE; // use MC infA
71Bool_t kUseESDTags = kFALSE; // use ESD tags for selection
72Bool_t kUseTR = kFALSE; // use track references
73Bool_t kUseAODTags = kFALSE; // use AOD tags
74Bool_t kSaveTrain = kFALSE; // save train configuration as:
75
9a5c5b1e 76
c38e3b95 77// ### Analysis modules to be included. Some may not be yet fully implemented.
78//==============================================================================
79Int_t iJETAN = 1; // Jet analysis (PWG4) // 1 write standard 2 write non-standard jets, 3 wrtie both
80Int_t iDIJETAN = 1;
e6993a52 81Int_t iJETANLib = 1;
c38e3b95 82Int_t iPWG1QASym = 0; // Eva's QA task compiled on the fly...
83Int_t iPWG4JetTasks = 0; // all jet tasks flag for lib laoding
84Int_t iPWG4JetServices = 0; // jet spectrum analysis
85Int_t iPWG4JetSpectrum = 0; // jet spectrum analysis
58ef946c 86Int_t iPWG4JCORRAN = 0; // JCORRAN module
c38e3b95 87Int_t iPWG4UE = 0; // Underlying Event analysis
e0c120d9 88Int_t iPWG4LeadingUE = 0; // Underlying Event analysis
89Int_t iPWG4CorrectionsUE = 0; // Underlying Event analysis
c166d299 90Int_t iPWG4TmpSourceSara = 0; // Underlying Event analysis not in svn
aba42fcb 91Int_t iPWG4Fragmentation = 0; // Official Fragmentation
9f77f0ce 92Int_t iPWG4JetChem = 0; // Jet chemistry
c38e3b95 93Int_t iPWG4PtQAMC = 0; // Marta's QA tasks
94Int_t iPWG4PtSpectra = 0; // Marta's QA tasks
95Int_t iPWG4PtQATPC = 0; // Marta's QA tasks
4721d8c5 96Int_t iPWG4Cosmics = 0; // Marta's Cosmics Taks
c38e3b95 97Int_t iPWG4ThreeJets = 0; // Sona's thrust task
cc636095 98Int_t iPWG4QGSep = 0; // Sona's QG Separation task
99Int_t iPWG4Minijet = 0; // Eva's Mini Jet Task cluster task
b53f2e4f 100Int_t iPWG4KMeans = 0; // Andreas' KMeans task
d2e6cdd5 101Int_t iPWG4Cluster = 0; // CKB cluster task
4721d8c5 102Int_t iEMCUtilLibs = 0; // Flag to satisfy dependence on EMC utils
911a740f 103Int_t iPWG4PartCorrLibs = 0; // Gustavo's part corr analysis
c38e3b95 104Int_t iPWG4PartCorr = 0; // Gustavo's part corr analysis
d2e6cdd5 105Int_t iPWG4CaloQA = 0; // Gustavo's part corr analysis
106Int_t iPWG4JetCorr = 0; // Paul's jet corr analysis
911a740f 107Int_t iPWG4Tagged = 0; // Gustavo's part corr analysis
121e4bd5 108Int_t iPWG4omega3pi = 0; // Omega to 3 pi analysis (PWG4)
17d96675 109Int_t iPWG4GammaConvLib = 0; // Gamma Conversio
53c63663 110Int_t iPWG4GammaConv = 0; // Gamma Conversio
17d96675 111Int_t iPWG4CaloConv = 0; // Gamma Conversio
22e3ae6c 112Int_t kHighPtFilterMask = 32; // change depending on the used AOD Filter
e6993a52 113TString kDeltaAODJetName = "AliAOD.Jets.root";
4721d8c5 114TString kDeltaAODJCORRANName = "AliAOD.JCORRAN.root";
53c63663 115TString kDeltaAODPartCorrName = "deltaAODPartCorr.root";
c38e3b95 116
117
118//==============================================================================
119// ### PROOF Steering varibales
120//==============================================================================
121//== proof setup variables
122TString kProofCluster = "alicecaf.cern.ch";
123Bool_t kProofUseAFPAR = kFALSE; // use AF special par file
124TString kProofAFversion = "AF-v4-17";
125//== proof input and output variables
126TString kProofDataSet = "/COMMON/COMMON/LHC09a4_run8100X#/esdTree";
127Bool_t kProofSaveToAlien = kFALSE; // save proof outputs in AliEn train_[trainName]_ddMonthyyyy_time.C
128TString kProofOutdir = "";
129Bool_t kProofClearPackages = kFALSE;
130Int_t kProofEvents = 10000;
131Int_t kProofOffset = 0;
132//== proof process variables
133
134
135//==============================================================================
136// ### Grid plugin Steering varibiables
137//==============================================================================
138//== grid plugin setup variables
139Bool_t kPluginUse = kTRUE; // do not change
140Bool_t kPluginUseProductionMode = kFALSE; // use the plugin in production mode
27cdf9c4 141TString kPluginRootVersion = "v5-27-06"; // *CHANGE ME IF MORE RECENT IN GRID*
d3af0232 142TString kPluginAliRootVersion = "v4-19-15-AN"; // *CHANGE ME IF MORE RECENT IN GRID*
9a5c5b1e 143Bool_t kPluginMergeViaJDL = kTRUE; // merge via JDL
144Bool_t kPluginFastReadOption = kFALSE; // use xrootd tweaks
145Bool_t kPluginOverwriteMode = kTRUE; // overwrite existing collections
dc6a7461 146Int_t kPluginOutputToRunNumber = 1; // write the output to subdirs named after run number
c38e3b95 147// TString kPluginExecutableCommand = "root -b -q";
148TString kPluginExecutableCommand = "source /Users/kleinb/setup_32bit_aliroot_trunk_clean_root_trunk.sh; alienroot -b -q ";
9a5c5b1e 149
c38e3b95 150// == grid plugin input and output variables
151TString kGridDatadir = "/alice/sim/PDC_08b/LHC09a1/AOD/";
9748e967 152Int_t kGridMaxRunsFromList = 999999999;
c38e3b95 153TString kGridLocalRunList = "";
154TString kGridOutdir = ""; // AliEn output directory. If blank will become output_<kTrainName>
3878a941 155TString kGridDataSet = ""; // sub working directory not to confuse different run xmls
9748e967 156Int_t kGridRunRange[2] = {0, -1}; // Set the run range
c38e3b95 157TString kGridRunPattern = "%03d"; // important for leading zeroes!!
158TString kGridPassPattern = "";
159TString kGridExtraFiles = ""; // files that will be added to the input list in the JDL...
9748e967 160Int_t kGridMaxMergeFiles = 12; // Number of files merged in a chunk grid run range
c38e3b95 161TString kGridMergeExclude = "AliAOD.root"; // Files that should not be merged
6408fe42 162TString kGridOutputStorages = "disk=2"; // Make replicas on the storages
c38e3b95 163// == grid process variables
c28abe00 164Int_t kGridRunsPerMaster = 100; // Number of runs per master job
e84da0a5 165Int_t kGridFilesPerJob = 100; // Maximum number of files per job (gives size of AOD)
c38e3b95 166
167//==============================================================================
168// ### Local Steering variables
169//==============================================================================
170//== local setup variables
171//== local input and output variables
172TString kLocalXMLDataset = ""; // Change local xml dataset for local interactive analysis
173TString kLocalDataList = "local_deltaaod.txt"; // Change local xml dataset for local interactive analysis
174// == local process variables
175
8ecf60e0 176TString kPluginMode;
c38e3b95 177
178
179// Temporaries.
180TString anaPars = "";
181TString anaLibs = "";
e84da0a5 182TString anaLibsExtra = "";
c38e3b95 183TString anaSources = "";
184// Function signatures
185class AliAnalysisAlien;
186
187//______________________________________________________________________________
188void AnalysisTrainPWG4Jets(const char *analysis_mode="local",
189 const char *plugin_mode="",
190 const char *config_file="",Int_t iOffset = 0)
191{
192// Main analysis train macro. If a configuration file is provided, all parameters
193// are taken from there but may be altered by CheckModuleFlags.
3878a941 194
8ecf60e0 195 // these flag may be needed by the config file
196 kPluginMode = plugin_mode;
197
198 if (strlen(config_file) && !LoadConfig(config_file)) return;
3878a941 199
c38e3b95 200 if(iOffset)kProofOffset = iOffset;
201 TString smode(analysis_mode);
202 smode.ToUpper();
203 if (kSaveTrain)WriteConfig();
8ecf60e0 204 // Check compatibility of selected modules
c38e3b95 205 CheckModuleFlags(smode);
ebad39a9 206 // gROOT->ProcessLine(".trace");
c38e3b95 207
208 printf("==================================================================\n");
209 printf("=========== RUNNING ANALYSIS TRAIN %s IN %s MODE ==========\n", kTrainName.Data(),smode.Data());
210 printf("==================================================================\n");
9748e967 211 printf("= Configuring analysis train for: =\n");
c38e3b95 212 if (iAODanalysis) printf("= AOD analysis =\n");
9748e967 213 else printf("= ESD analysis =\n");
214 if (iPhysicsSelection) printf("= Physics selection =\n");
cfd02305 215 if (useTender) printf("= Using tender =\n");
c38e3b95 216 if (iESDfilter) printf("= ESD filter =\n");
217 if (iJETAN) printf("= Jet analysis =\n");
218 printf("==================================================================\n");
9748e967 219
220 char *printMask = ":: %20s %10d\n";
221 printf(printMask,"Fill AOD",(UInt_t)kFillAOD);
222 printf(printMask,"Save AOD", (UInt_t)kSaveAOD);
223 printf(printMask,"MC truth", (UInt_t)kUseMC);
224 printf(printMask,"KINE filter", (UInt_t)kUseKinefilter);
225 printf(printMask,"track refs", (UInt_t)kUseTR);
226 printf(printMask,"tags", (UInt_t)kUseESDTags);
227 printf(printMask,"AOD tags", (UInt_t)kUseAODTags);
228 printf(printMask,"debugging", (UInt_t)kUseDebug);
229 printf(printMask,"PAR files", (UInt_t)kUsePAR);
230 printf(printMask,"AliEn plugin", (UInt_t)kPluginUse);
231 printf(printMask,"PWG1 QA sym", iPWG1QASym);
232 printf(printMask,"PWG4 Source Sara",iPWG4TmpSourceSara);
aba42fcb 233 printf(printMask,"PWG4 Fragmentation",iPWG4Fragmentation);
9748e967 234 printf(printMask,"PWG4 Jet Chem",iPWG4JetChem);
235 printf(printMask,"PWG4 Jet tasks",iPWG4JetTasks);
236 printf(printMask,"PWG4 Jet Services",iPWG4JetServices);
237 printf(printMask,"PWG4 Jet Spectrum",iPWG4JetSpectrum);
238 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
239 printf(printMask,"PWG4 UE",iPWG4UE);
e0c120d9 240 printf(printMask,"PWG4 Leading UE",iPWG4LeadingUE);
9748e967 241 printf(printMask,"PWG4 Corrections UE",iPWG4CorrectionsUE);
242 printf(printMask,"PWG4 Pt QA MC",iPWG4PtQAMC);
243 printf(printMask,"PWG4 Pt Spectra",iPWG4PtSpectra);
244 printf(printMask,"PWG4 Pt QA TPC",iPWG4PtQATPC);
245 printf(printMask,"PWG4 Cosmics",iPWG4Cosmics);
246 printf(printMask,"PWG4 Three Jets",iPWG4ThreeJets);
cc636095 247 printf(printMask,"PWG4 QGSep",iPWG4QGSep);
248 printf(printMask,"PWG4 Minijet",iPWG4Minijet);
9748e967 249 printf(printMask,"PWG4 KMeans",iPWG4KMeans);
250 printf(printMask,"PWG4 Cluster",iPWG4Cluster);
251 printf(printMask,"PWG4 Part Corr",iPWG4PartCorr);
252 printf(printMask,"PWG4 Calo QA",iPWG4CaloQA);
253 printf(printMask,"PWG4 Jet Corr",iPWG4JetCorr);
254 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
255 printf(printMask,"PWG4 Tagged",iPWG4Tagged);
256 printf(printMask,"PWG4 omega to 3 pi ",iPWG4omega3pi);
257 printf(printMask,"PWG4 Gamma Conv",iPWG4GammaConv);
17d96675 258 printf(printMask,"PWG4 Calo Conv",iPWG4CaloConv);
9748e967 259 printf(printMask,"HighPt FilterMask",kHighPtFilterMask);
3878a941 260
c38e3b95 261 //==========================================================================
262 // Connect to back-end system
263 if (!Connect(smode)) {
264 ::Error("AnalysisTrain", "Could not connect to %s back-end", analysis_mode);
265 return;
266 }
267
268 // Load common libraries and set include path
269 if (!LoadCommonLibraries(smode)) {
270 ::Error("AnalysisTrain", "Could not load common libraries");
271 return;
272 }
3878a941 273
274
c38e3b95 275
276 // Make the analysis manager and connect event handlers
e84da0a5 277 AliAnalysisManager *mgr = new AliAnalysisManager("PWG4Train", "pwg4 mini train");
c38e3b95 278 if (kCommonOutputFileName.Length()>0)mgr->SetCommonFileName(kCommonOutputFileName.Data());
279 if (kProofSaveToAlien) mgr->SetSpecialOutputLocation(kProofOutdir);
4a6f59cb 280 mgr->SetNSysInfo(0);
c38e3b95 281 if (!strcmp(plugin_mode, "test")) mgr->SetNSysInfo(1);
53c63663 282 if (kUseSysInfo)mgr->SetNSysInfo(kUseSysInfo);
9a5c5b1e 283 mgr->SetSkipTerminate(kSkipTerminate);
4a6f59cb 284
c38e3b95 285 // Load analysis specific libraries
286 if (!LoadAnalysisLibraries(smode)) {
287 ::Error("AnalysisTrain", "Could not load analysis libraries");
288 return;
289 }
290
291 // Create input handler (input container created automatically)
292 if (iAODanalysis) {
293 // AOD input handler
294 AliAODInputHandler *aodH = new AliAODInputHandler();
295 mgr->SetInputEventHandler(aodH);
e6993a52 296 if (iPWG4JetTasks) aodH->AddFriend(Form("deltas/%s",kDeltaAODJetName.Data()));
297 if (iPWG4PartCorr) aodH->AddFriend(Form("deltas/%s"kDeltaAODJetName.Data()));
c38e3b95 298 } else {
299 // ESD input handler
300 AliESDInputHandler *esdHandler = new AliESDInputHandler();
301 if (kUseESDTags) esdHandler->SetReadTags();
c166d299 302 esdHandler->SetReadFriends(kFALSE);
c38e3b95 303 mgr->SetInputEventHandler(esdHandler);
4a6f59cb 304 // if(iPWG4PtQATPC&& !kTrainName.Contains("pass5"))esdHandler->SetActiveBranches("ESDfriend");
c166d299 305
c38e3b95 306 }
f4d11ac8 307
c38e3b95 308 // Monte Carlo handler
309 if (kUseMC && !iAODanalysis) {
310 AliMCEventHandler* mcHandler = new AliMCEventHandler();
311 mgr->SetMCtruthEventHandler(mcHandler);
312 mcHandler->SetReadTR(kUseTR);
313 }
314 // AOD output container, created automatically when setting an AOD handler
315 if (iAODhandler) {
316 // AOD output handler
317 AliAODHandler* aodHandler = new AliAODHandler();
318 aodHandler->SetOutputFileName("AliAOD.root");
6408fe42 319 aodHandler->SetFillAODforRun(kFillAOD);
c38e3b95 320
321 mgr->SetOutputEventHandler(aodHandler);
121e4bd5 322 //
c38e3b95 323 if (iAODanalysis) {
324
325 // aodHandler->SetCreateNonStandardAOD();
326 // if (iJETAN)aodHandler->SetOutputFileName(kDeltaAODJetName.Data());
327 }
328 AliAnalysisDataContainer * cout_aod = mgr->GetCommonOutputContainer();
329 cout_aod->SetSpecialOutput();
330 }
331 // Debugging if needed
b03b08a3 332
3878a941 333 if (kUseDebug){
334 mgr->SetDebugLevel(3);
335 }
4721d8c5 336 if(kUseSysInfo>0){
337 mgr->RegisterExtraFile("syswatch.root");
338 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
339 kGridMergeExclude += "syswatch.root";
340 }
b03b08a3 341 else{
342 AliLog::SetGlobalLogLevel(AliLog::kError);
343 }
46534866 344
345
c38e3b95 346 //==========================================================================
347 // Create the chain. In this example it is created only from ALIEN files but
348 // can be done to work in batch or grid mode as well.
349 TChain *chain = CreateChain(smode, plugin_mode);
350
351 //==========================================================================
352 // Load the tasks configuration macros for all wagons. These files are supposed now to be
353 // in the current workdir, but in AliEn they will be in the file catalog,
354 // mapped from AliRoot and pecified in the jdl input list.
355
356 // For now connection to top input container and common AOD output container
357 // is done in this macro, but in future these containers will be connected
358 // from each task configuration macro.
cfd02305 359
360 //
361 // Tender and supplies. Needs to be called for every event.
362 //
363 if (useTender) {
364 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/TenderSupplies/AddTaskTender.C");
365 AliAnalysisTaskSE *tender = AddTaskTender(kTRUE);
366 // tender->SelectCollisionCandidates();
367 tender->SetDebugLevel(2);
368 }
369
370
371
e84da0a5 372 if(iPhysicsSelection && !iAODanalysis){
d2e6cdd5 373 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskPhysicsSelection.C");
d8f81b37 374 AliPhysicsSelectionTask* physSelTask = AddTaskPhysicsSelection(kIsMC,kTRUE,kTRUE); // last flag also adds information on
e84da0a5 375 }
376
c38e3b95 377 if (iESDfilter && !iAODanalysis) {
378 // ESD filter task configuration.
ebad39a9 379 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskESDFilterPWG4Train.C");
c38e3b95 380 AliAnalysisTaskESDfilter *taskesdfilter = AddTaskESDFilter(kUseKinefilter,kUseMuonfilter);
17d96675 381 taskesdfilter->SetEnableFillAOD(kFALSE);
4721d8c5 382 if(kIsMC){
383 mgr->RegisterExtraFile("pyxsec_hists.root");
384 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
385 kGridMergeExclude += "pyxsec_hists.root";
386
387 }
c38e3b95 388 }
389
390 // AOD tags
391 if (kUseAODTags) {
392 AliAnalysisTaskTagCreator* tagTask = new AliAnalysisTaskTagCreator("AOD Tag Creator");
393 mgr->AddTask(tagTask);
394 AliAnalysisDataContainer *coutTags = mgr->CreateContainer("cTag", TTree::Class(),
395 AliAnalysisManager::kOutputContainer, "AOD.tag.root");
396 mgr->ConnectInput (tagTask, 0, mgr->GetCommonInputContainer());
397 mgr->ConnectOutput(tagTask, 1, coutTags);
398 }
399
400 // Jet analysis
401 if (iJETAN) {
402 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJets.C");
403 AliAnalysisTaskJets *taskjets = 0;
404 if(iJETAN&1)taskjets = AddTaskJets(kHighPtFilterMask);
b53f2e4f 405 if(iJETAN&2){
406 UInt_t selection = 0;
17d96675 407 if(!kFillAOD){
408 selection = 0xffffff&~(1<<13)&~(1<<5)&~(1<<6); // switch OFF DA and all R = 0.7 to save processing time
409 selection &= ~(1<<1)&~(1<<2)&~(1<<4)&~(1<<6)&~(1<<8)&~(1<<10)&~(1<<12);
410 }
411 else {
412 selection = 0xffffff&~(1<<13)&~(1<<5)&~(1<<6); // switch OFF DA and all R = 0.7 to save processing time;
413 selection &= ~(1<<1)&~(1<<2)&~(1<<4)&~(1<<6)&~(1<<8)&~(1<<10)&~(1<<12);
414 }
b53f2e4f 415 AddTaskJetsDelta(kDeltaAODJetName.Data(),kHighPtFilterMask,kUseAODMC,selection);
e0c120d9 416 AddTaskJets("AOD","FASTKT",0.2,kHighPtFilterMask);
b53f2e4f 417 }
c38e3b95 418 if (!taskjets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
419 }
420
bd80a748 421 if(iPWG4Cluster){
422 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCluster.C");
423 AliAnalysisTaskJetCluster *taskCl = 0;
424 if(iPWG4Cluster&1){
8ecf60e0 425 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelection,"KT",0.4,0,1); // this one is for the background jets
426 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelection,"KT",0.5,0,1); // this one is for the background jets
427 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelection,"KT",0.6,0,1); // this one is for the background jets
428 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelection,"KT",0.7,0,1); // this one is for the background jets
429
bd80a748 430 if (!taskCl) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCluster cannot run for this train conditions - EXCLUDED");
431 }
432 if(iPWG4Cluster&2){
433 UInt_t selection = 0;
434 if(!iAODanalysis) selection = 0xffffff;
435 else selection = 1<<0|1<<1|1<<2|1<<3|1<<4|1<<5|1<<7|1<<8|1<<9;
436 selection&=~(1<<4); // exluded R = .04 already the dafault
437 AddTaskJetClusterDelta(kHighPtFilterMask,kUseAODMC,iPhysicsSelection,"KT",selection);
438 }
439 if(iPWG4Cluster&4){
440 UInt_t selection = 0;
441 if(!iAODanalysis){
442 selection = 0xffffff;
443 selection &= ~(1<<1)&~(1<<3)&~(1<<5)&~(1<<7)&~(1<<9);
444 }
445 else selection = 1<<0|1<<1|1<<2|1<<3|1<<4|1<<5|1<<7|1<<8|1<<9;
446 AddTaskJetClusterDelta(kHighPtFilterMask,kUseAODMC,iPhysicsSelection,"ANTIKT",selection);
8ecf60e0 447 // AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelection,"ANTIKT",0.4,0,1);
bd80a748 448
449 }
450 }
451
c38e3b95 452 if (iDIJETAN) {
453 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskDiJets.C");
454 AliAnalysisTaskDiJets *taskdijets = 0;
82ebd295 455 if(iDIJETAN&1)taskdijets = AddTaskDiJets();
c38e3b95 456 if (!taskdijets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
82ebd295 457 if(iDIJETAN&2){
458 taskdijets = AddTaskDiJets("jetsAOD_CDF07");
459 taskdijets = AddTaskDiJets("jetsAOD_DA07");
460 taskdijets = AddTaskDiJets("jetsAOD_FASTJET07");
461 taskdijets = AddTaskDiJets("jetsAOD_FASTKT07");
462 taskdijets = AddTaskDiJets("jetsAOD_SISCONE07");
463 taskdijets = AddTaskDiJets("jetsAOD_UA107");
464 }
c38e3b95 465 }
466
c38e3b95 467 if(iPWG1QASym){
5dbdc61f 468 gROOT->LoadMacro("$ALICE_ROOT/PWG1/PilotTrain/AddTaskQAsym.C");
c38e3b95 469 AliAnalysisTaskQASym *taskQASym = AddTaskQAsym(-1);
470 if (!taskQASym) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQASym cannot run for this train conditions - EXCLUDED");
121e4bd5 471 }
c38e3b95 472
121e4bd5 473
474
475 if(iPWG4TmpSourceSara){
476 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskEta.C");
477 AliAnalysisTaskEta *taskEta = AddTaskEta();
478 if (!taskEta) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskEta cannot run for this train conditions - EXCLUDED");
c38e3b95 479 }
480
aba42fcb 481 if(iPWG4Fragmentation){
482 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskFragmentationFunction.C");
8be7acf2 483 AliAnalysisTaskFragmentationFunction *taskFrag = 0;
484 if(kUseAODMC){
485 taskFrag = AddTaskFragmentationFunction(1<<1,kHighPtFilterMask);
486 taskFrag = AddTaskFragmentationFunction(1<<2,kHighPtFilterMask);
5fde4a38 487 // taskFrag = AddTaskFragmentationFunction(1<<3,kHighPtFilterMask);
cfd02305 488 taskFrag = AddTaskFragmentationFunction(1<<5,kHighPtFilterMask);
489 taskFrag = AddTaskFragmentationFunction(1<<11); // w/o acceptance cuts
c2658535 490 taskFrag = AddTaskFragmentationFunction(1<<12); // with acceptance cuts
491 // anti-kt
492 taskFrag = AddTaskFragmentationFunction(1<<21); // w/o acceptance cuts
493 taskFrag = AddTaskFragmentationFunction(1<<22); // with acceptance cuts
494
8be7acf2 495 }
496 else{
497 taskFrag = AddTaskFragmentationFunction(1<<0,kHighPtFilterMask);
c2658535 498 taskFrag = AddTaskFragmentationFunction(1<<10,kHighPtFilterMask);
499 taskFrag = AddTaskFragmentationFunction(1<<20,kHighPtFilterMask);
8be7acf2 500 }
501
aba42fcb 502 if (!taskFrag) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskFragmentationFunction cannot run for this train conditions - EXCLUDED");
c166d299 503 }
504
c580ebbb 505
9f77f0ce 506 if(iPWG4JetChem){
507 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetChem.C");
508 AliAnalysisTask *taskChem = AddTaskJetChem();
c580ebbb 509 if (!taskChem) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetChem cannot run for this train conditions - EXCLUDED");
510 }
511
512
c38e3b95 513 if(iPWG4JetServices){
514 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetServices.C");
515 AliAnalysisTaskJetServices *taskjetServ = 0;
516 taskjetServ = AddTaskJetServices();
517 if (!taskjetServ) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetServices cannot run for this train conditions - EXCLUDED");
53c63663 518 if(kGridRunRange[0]>0)taskjetServ->SetRunRange(kGridRunRange[0],kGridRunRange[1]);
27cdf9c4 519 else taskjetServ->SetRunRange(110000,160000);
520 taskjetServ->SetMCData(kIsMC);
dc6a7461 521 taskjetServ->SetUsePhysicsSelection((Bool_t)iPhysicsSelection);
9f77f0ce 522 taskjetServ->SetDebugLevel(0);
c38e3b95 523 }
524
c38e3b95 525 if(iPWG4JetSpectrum){
526 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetSpectrum2.C");
527 AliAnalysisTaskJetSpectrum2 *taskjetSpectrum = 0;
b53f2e4f 528 if(iPWG4JetSpectrum&1){
17d96675 529 taskjetSpectrum = AddTaskJetSpectrum2("jets","","",kHighPtFilterMask,iPhysicsSelection);
e6993a52 530 if(!iAODanalysis){
d3af0232 531 // taskjetSpectrum = AddTaskJetSpectrum2("jets","tracks32",32,iPhysicsSelection); // tmp hack to give it a different name
4d5d766e 532 // taskjetSpectrum = AddTaskJetSpectrum2("jets","64",64,iPhysicsSelection);
46534866 533
5ad2b067 534 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","clustersAOD_ANTIKT04","",kHighPtFilterMask,iPhysicsSelection);
535
f2dd0695 536 if(kIsMC){
17d96675 537
538 UInt_t eventSelection = AliAnalysisHelperJetTasks::kIsPileUp|AliAnalysisHelperJetTasks::kVertexIn;
539 if(iPhysicsSelection)eventSelection |= AliAnalysisHelperJetTasks::kPhysicsSelection;
540 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC_FASTJET04","",kHighPtFilterMask,iPhysicsSelection,eventSelection);
541 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC2_FASTJET04","",kHighPtFilterMask,iPhysicsSelection,eventSelection);
542
543 eventSelection = AliAnalysisHelperJetTasks::kIsCosmic|AliAnalysisHelperJetTasks::kVertexIn;
544 if(iPhysicsSelection)eventSelection |= AliAnalysisHelperJetTasks::kPhysicsSelection;
545 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC_FASTJET04","",kHighPtFilterMask,iPhysicsSelection,eventSelection);
546
547 eventSelection = AliAnalysisHelperJetTasks::kNone;
548 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC2_FASTJET04","",kHighPtFilterMask,iPhysicsSelection,eventSelection);
549 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC_FASTJET04","",kHighPtFilterMask,iPhysicsSelection,eventSelection);
46534866 550
551 }
552 else{
17d96675 553 UInt_t eventSelection = AliAnalysisHelperJetTasks::kIsPileUp|AliAnalysisHelperJetTasks::kVertexIn;
554 if(iPhysicsSelection)eventSelection |= AliAnalysisHelperJetTasks::kPhysicsSelection;
555 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","","",kHighPtFilterMask,iPhysicsSelection,eventSelection);
556
557 eventSelection = AliAnalysisHelperJetTasks::kIsCosmic|AliAnalysisHelperJetTasks::kVertexIn;
558 if(iPhysicsSelection)eventSelection |= AliAnalysisHelperJetTasks::kPhysicsSelection;
559 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","","",kHighPtFilterMask,iPhysicsSelection,eventSelection);
f2dd0695 560 }
e6993a52 561 }
d2e6cdd5 562 if (!taskjetSpectrum) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetSpectrum2 cannot run for this train conditions - EXCLUDED");
17d96675 563 // taskjetSpectrum->SetDebugLevel(1);
b53f2e4f 564 }
d2e6cdd5 565
e6993a52 566 if(iPWG4JetSpectrum&2){
567 UInt_t selection = 0;
17d96675 568 if(!iAODanalysis){
569 selection = 0xffffff;
570 // switch off 07 radii
571 selection &= ~(1<<6)&~(1<<11)&~(1<<12)&~(1<<13)&~(1<<14);
572 }
e6993a52 573 else selection = 1<<0|1<<1|1<<2|1<<3|1<<4|1<<5|1<<7|1<<8|1<<9;
e0c120d9 574 AddTaskJetSpectrum2Delta(kHighPtFilterMask,kUseAODMC,iPhysicsSelection,selection,0,kTRUE);
e6993a52 575 }
c38e3b95 576 }
58ef946c 577 if(iPWG4JCORRAN){
578 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJCORRANTask.C");
4721d8c5 579 AliJCORRANTask* corran = AddTaskJCORRAN(kDeltaAODJCORRANName.Data(),0);
58ef946c 580 if(!corran)::Warning("AnalysisTrainPWG4Jets", "AliJCORRANTask cannot run for this train conditions - EXCLUDED");
4721d8c5 581 else{
582 if(kDeltaAODJCORRANName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJCORRANName.Data());
583 }
58ef946c 584 }
585
c38e3b95 586 if(iPWG4UE){
587 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskUE.C");
588 AliAnalysisTaskUE *taskUE = 0;
589 if(iPWG4UE&1)taskUE = AddTaskUE();
590 if(iPWG4UE&2){
94ee88d4 591 taskUE =AddTaskUE("jetsAOD_CDF04","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
17d96675 592 // taskUE =AddTaskUE("jetsAOD_CDF07","CDF", "LJ", "TRANSV","MSP");
94ee88d4 593 taskUE =AddTaskUE("jetsAOD_SISCONE04","CDF", "LJ", "TRANSV","MSP");
17d96675 594 // taskUE =AddTaskUE("jetsAOD_SISCONE07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
94ee88d4 595 taskUE =AddTaskUE("jetsAOD_ICDF","CDF","LJ","TRANSV","MSP");
596 taskUE =AddTaskUE("jetsAOD_FASTKT04","CDF", "LJ", "TRANSV","MSP");
17d96675 597 // taskUE =AddTaskUE("jetsAOD_FASTKT07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
58ef946c 598 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta05", "TRANSV","MSP");
599 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta09", "TRANSV","MSP");
c38e3b95 600 }
2bb1f4ca 601
c38e3b95 602 if (!taskUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskUE cannot run for this train conditions - EXCLUDED");
603 }
e0c120d9 604
605 if(iPWG4LeadingUE){
606 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskLeadingTrackUE.C");
607 AliAnalysisTaskLeadingTrackUE *taskLeadingUE = AddTaskLeadingTrackUE(kUseMC);
608 if (!taskLeadingUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTasLeadingTrackkUE cannot run for this train conditions - EXCLUDED");
27cdf9c4 609 // taskLeadingUE->SetFilterBit(64);
e0c120d9 610 }
611
612
9748e967 613 if(iPWG4CorrectionsUE){
614 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCorrectionsUE.C");
615 AliAnalysisTaskCorrectionsUE *taskCorrectionsUE = 0;
616 if(iPWG4CorrectionsUE&1)taskCorrectionsUE = AddTaskCorrectionsUE("jetsAOD_NONE","CDF","MP_eta05","TRANSV","MSP",kFALSE);
617 if (!taskCorrectionsUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCorrectionsUE cannot run for this train conditions - EXCLUDED");
618 }
c38e3b95 619
620 if(iPWG4ThreeJets){
621 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskThreeJets.C");
622 AliAnalysisTaskThreeJets *taskThree = AddTaskThreeJets();
623 if(!taskThree)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskThreets cannot run for this train conditions - EXCLUDED");
624 }
cc636095 625 if(iPWG4QGSep){
626 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskQGSep.C");
627 AliAnalysisTaskQGSep *taskQGSep = AddTaskQGSep(kUseMC,iAODanalysis);
628 if(!taskQGSep)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQGSep cannot run for this train conditions - EXCLUDED");
629 }
630
631
632 if(iPWG4Minijet){
633 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskMinijet.C");
634 AliAnalysisTaskMinijet *taskMinijet = AddTaskMinjet("esd",kUseMC);
635 // if we ha highmult trigger add another task
636 if(!taskMini)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskMinjet cannot run for this train conditions - EXCLUDED");
637 }
638
639
c38e3b95 640 if(iPWG4PtQAMC){
641 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQAMC.C");
f87effcf 642 AliPWG4HighPtQAMC *taskQAMC = 0;
643 if(kUseMC){
644 if(iPWG4PtQAMC&1)taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),0);
645 if(iPWG4PtQAMC&1)taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),1);
646 }
c38e3b95 647 if (!taskQAMC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQAMC cannot run for this train conditions - EXCLUDED");
648 }
649
650 if(iPWG4PtQATPC){
651 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQATPConly.C");
10295ac3 652 AliPWG4HighPtQATPConly *taskQATPC = 0;
b1cd0099 653 if(iPWG4PtQATPC&1)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),1);
654 if(iPWG4PtQATPC&2)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),2);
10295ac3 655
656 if (!taskQATPC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQATPC cannot run for this train conditions - EXCLUDED");
c38e3b95 657 }
3878a941 658
1f329128 659 if(iPWG4Cosmics){
660 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4CosmicCandidates.C");
661
662 AliPWG4CosmicCandidates *taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(0);
663 taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(1);
664
665 if (!taskPWG4CosmicCandidates) ::Warning("AnalysisTrainPWG4Jets", "AddTaskPWG4CosmicCandidates cannot run for this train conditions - EXCLUDED");
666 }
667
668
c38e3b95 669 if(iPWG4PtSpectra){
670 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtSpectra.C");
b1cd0099 671 AliPWG4HighPtSpectra *taskPtSpectra = AddTaskPWG4HighPtSpectra(kGridDataSet.Data());
c38e3b95 672 if (!taskPtSpectra) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskPtSpectra cannot run for this train conditions - EXCLUDED");
673 }
b53f2e4f 674 if(iPWG4KMeans){
675 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskKMeans.C");
676 AliAnalysisTaskKMeans *taskKMeans = AddTaskKMeans();
677 if (!taskKMeans) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskKMenans cannot run for this train conditions - EXCLUDED");
678 }
679
c38e3b95 680 if(iPWG4PartCorr){
681 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPartCorr.C");
14526afb 682 AliAnalysisTaskParticleCorrelation *taskpartcorrPHOS = AddTaskPartCorr("AOD", "PHOS",kFALSE,kIsMC);
c38e3b95 683 if (!taskpartcorrPHOS) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation PHOS cannot run for this train conditions - EXCLUDED");
14526afb 684 AliAnalysisTaskParticleCorrelation *taskpartcorrEMCAL = AddTaskPartCorr("AOD", "EMCAL",kFALSE,kIsMC);
c38e3b95 685 if (!taskpartcorrEMCAL) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation EMCAL cannot run for this train conditions - EXCLUDED");
4721d8c5 686 if(kDeltaAODPartCorrName.Length()>0)mgr->RegisterExtraFile(kDeltaAODPartCorrName.Data());
121e4bd5 687 }
688
d2e6cdd5 689 if(iPWG4CaloQA){
690 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/QA/AddTaskCalorimeterQA.C");
9748e967 691 AliAnalysisTaskParticleCorrelation *taskcaloQA = AddTaskCalorimeterQA("ESD",kFALSE,kIsMC,kCaloQAOutputFileName.Data());
d2e6cdd5 692 if(!taskcaloQA)::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation QA cannot run - EXCLUDED");
aba42fcb 693 // if(kCaloQAOutputFileName.Length()>0)mgr->RegisterExtraFile(kCaloQAOutputFileName.Data());
d2e6cdd5 694 }
695
d2e6cdd5 696 if(iPWG4JetCorr){
697 // using namespace JetCorrelHD;
d3af0232 698 TString cdir = gSystem->WorkingDirectory();
699 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
d2e6cdd5 700 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCorrel.C");
701 AliAnalysisTaskJetCorrel *taskjetcorr = AddTaskJetCorrel();
d3af0232 702 gSystem->ChangeDirectory(cdir);
c166d299 703 if (!taskjetcorr) ::Warning("AnalysisTrainNew", "AliAnalysisTaskJetCorrel cannot run for this train conditions - EXCLUDED");
d2e6cdd5 704 }
705
911a740f 706 if(iPWG4Tagged){
707 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskTaggedPhotons.C");
708 AliAnalysisTaskTaggedPhotons * taskTagged = AddTaskTaggedPhotons(kFALSE); // EMCAL
58ef946c 709 taskTagged = AddTaskTaggedPhotons(kTRUE); // PHOS
911a740f 710 if (!taskTagged) ::Warning("AnalysisTrainNew", "AliAnalysisTaskTaggedPhotons cannot run for this train conditions - EXCLUDED");
711 }
121e4bd5 712 if (iPWG4omega3pi) {
713 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskomega3pi.C");
714 AliAnalysisTaskOmegaPi0PiPi *taskomega3pi = AddTaskomega3pi();
715 if (!taskomega3pi) ::Warning("AnalysisTrainNew", "AliAnalysisTaskomega3pi cannot run\
716 for these train conditions - EXCLUDED");
717 }
718
53c63663 719 // PWG4 gamma conversion analysis
720 if (iPWG4GammaConv) {
721 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskGammaConversion.C");
722 TString cdir = gSystem->WorkingDirectory();
723 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
724 // TString gcArguments = "-run-on-train -run-jet -run-chic -run-neutralmeson -run-cf";
58ef946c 725 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
726 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
b0a36f28 727 TString gcArguments = "-run-on-train -run-jet -run-omega-meson -use-own-xyz -run-neutralmeson -no-aod";
27cdf9c4 728 // TString kGCAnalysisCutSelectionId="9003562000100310";
cfd02305 729 // TString kGCAnalysisCutSelectionId="9003562000100312";
730 // gcArguments.Append(Form(" -set-cut-selection %s ",kGCAnalysisCutSelectionId.Data()));
53c63663 731 if(!kIsMC)gcArguments += " -mc-off";
732 AliAnalysisTaskGammaConversion * taskGammaConversion = AddTaskGammaConversion(gcArguments,mgr->GetCommonInputContainer());
733 gSystem->ChangeDirectory(cdir);
121e4bd5 734 taskGammaConversion->SelectCollisionCandidates();
53c63663 735 if (!taskGammaConversion) ::Warning("AnalysisTrainNew", "AliAnalysisTaskGammaConversion cannot run for these train conditions - EXCLUDED");
736 }
737
17d96675 738 if (iPWG4CaloConv) {
739 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCaloConv.C");
740 AliAnalysisTaskCaloConv * taskCaloConv = AddTaskCaloConv();
741 if (!taskCaloConv) ::Warning("AnalysisTrainNew", "AliAnalysisTaskCaloConv cannot run for these train conditions - EXCLUDED");
742 }
743
744
3878a941 745
c38e3b95 746 //==========================================================================
747 // FOR THE REST OF THE TASKS THE MACRO AddTaskXXX() is not yet implemented/
748 // Run the analysis
749 //
750 if (kPluginUse) {
751 AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
752 AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
753 }
754
755 if (mgr->InitAnalysis()) {
756 mgr->PrintStatus();
757 // if (kSaveTrain || strlen(config_file)) gSystem->ChangeDirectory(kTrainName);
e84da0a5 758 if (!strcmp(plugin_mode,"submit")&&smode=="GRID"){
c38e3b95 759 TString alien_workdir = gGrid->GetHomeDirectory();
760 if (iAODanalysis) alien_workdir += "analysisAOD";
761 else alien_workdir += "analysisESD";
3878a941 762 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
c38e3b95 763 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
e84da0a5 764 printf("=== AnalysisTrainPWG4Jets:: Registering jdl in the work directory alien://%s/%s, should be done by the manager! ===\n",
c38e3b95 765 alien_workdir.Data(),gridhandler->GetGridOutputDir());
58ef946c 766
767 TString dest;
768 dest = Form("%s/%s/%s.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
769 if(AliAnalysisAlien::FileExists(dest.Data())){
770 // Printf("%s exist on grid removing...",dest.Data());
771 // gGrid->Rm(dest.Data());
772 }
773 TFile::Cp(Form("file:%s.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
4721d8c5 774
775
776 TString dest;
777 dest = Form("%s/%s/%s_merge.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
778 if(AliAnalysisAlien::FileExists(dest.Data())){
779 // Printf("%s exist on grid removing...",dest.Data());
780 // gGrid->Rm(dest.Data());
781 }
782 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
783
58ef946c 784
73b7619a 785 dest = Form("%s/rootfiles/STEER/LQ1dRef_v1.root",gGrid->GetHomeDirectory());
58ef946c 786 if(AliAnalysisAlien::FileExists(dest.Data())){
787 Printf("%s exist on grid removing...",dest.Data());
788 gGrid->Rm(dest.Data());
789 }
790 TFile::Cp(Form("file:%s/STEER/LQ1dRef_v1.root",
9748e967 791 gSystem->ExpandPathName("$ALICE_ROOT")),Form("alien://%s",dest.Data()));
c38e3b95 792 }
3878a941 793 AliLog::SetGlobalLogLevel(AliLog::kError);
c166d299 794 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
795 TFile * fM = TFile::Open("manager_local.root","RECREATE");
796 mgr->Write();
797 fM->Close();
798 }
46534866 799
800 // grmpf, aliroot error handler overwrites root
801 gErrorIgnoreLevel = kErrorIgnoreLevel;
802 if(gErrorIgnoreLevel>3000) AliLog::SetGlobalLogLevel(AliLog::kFatal);
c38e3b95 803 StartAnalysis(smode, chain);
4a6f59cb 804 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
805 for(int i = 0;i < mgr->GetTopTasks()->GetEntries();i++){
806 mgr->ProfileTask(i);
807 }
808 }
c38e3b95 809 if (!strcmp(plugin_mode, "offline")&&smode=="GRID"){
e84da0a5 810 // Offline mode path files
811 // PatchJDL();
812 PatchAnalysisMacro();
813 }
c38e3b95 814
e84da0a5 815 if (kSaveTrain && smode=="GRID") {
816 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
817 TString alien_workdir = gGrid->GetHomeDirectory();
818 if (iAODanalysis) alien_workdir += "analysisAOD";
3878a941 819 else alien_workdir += "analysisESD";
820 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
e84da0a5 821 // kGridOutdir = gridhandler->GetGridOutputDir();
822 printf("=== Registering ConfigTrain.C in the work directory <%s> ===\n",
c38e3b95 823 alien_workdir.Data());
e84da0a5 824 if (AliAnalysisAlien::FileExists(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data())))
825 gGrid->Rm(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
826 if (strcmp(plugin_mode, "test"))
827 TFile::Cp(Form("file:%sConfig.C",kTrainName.Data()), Form("alien://%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
828 }
829 }
c38e3b95 830}
831
832//______________________________________________________________________________
833void StartAnalysis(const char *mode, TChain *chain) {
834// Start analysis.
835 Int_t imode = -1;
836 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
837 if (!strcmp(mode, "LOCAL")) imode = 0;
838 if (!strcmp(mode, "PROOF")) imode = 1;
839 if (!strcmp(mode, "GRID")) imode = 2;
840 switch (imode) {
841 case 0:
842 if (!chain) {
843 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
844 return;
845 }
82ebd295 846 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
c38e3b95 847 return;
848 case 1:
849 if (!kProofDataSet.Length()) {
850 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "kProofDataSet is empty");
851 return;
852 }
853 mgr->StartAnalysis(mode, kProofDataSet, kProofEvents,kProofOffset);
854 return;
855 case 2:
856 if (kPluginUse) {
857 if (!mgr->GetGridHandler()) {
858 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Grid plugin not initialized");
859 return;
860 }
ebad39a9 861 mgr->StartAnalysis("grid",chain,kNumberOfEvents);
c38e3b95 862 } else {
863 if (!chain) {
864 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
865 return;
866 }
867 mgr->StartAnalysis(mode, chain);
ebad39a9 868 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
c38e3b95 869 }
870 return;
871 }
872}
873
874//______________________________________________________________________________
875void CheckModuleFlags(const char *mode) {
876// Checks selected modules and insure compatibility
877 Int_t imode = -1;
878 if (!strcmp(mode, "LOCAL")) imode = 0;
879 if (!strcmp(mode, "PROOF")) imode = 1;
880 if (!strcmp(mode, "GRID")) imode = 2;
881
882
e84da0a5 883 if (kUseCPAR) {
884 kPluginAliRootVersion = ""; // NO aliroot if we use CPAR
885 }
c38e3b95 886
887 if (imode==1) {
888 if (!kUsePAR) {
889 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PAR files enabled due to PROOF analysis");
890 kUsePAR = kTRUE;
891 }
892 }
893 if (imode != 2) {
894 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AliEn plugin disabled since not in GRID mode");
895 kPluginUse = kFALSE;
896 }
897
898
899 if(!kIsMC){
900 // switch off anthin related to MC
901 kUseMC = 0;
902 kUseAODMC = 0;
903 kUseTR = kFALSE;
904 }
905
906 if (iAODanalysis) {
907 // AOD analysis
908 if (kUseMC)
909 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "MC usage disabled in analysis on AOD's");
910 if (kUseAODTags)
911 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AOD tags usage disabled in analysis on AOD's");
912 kUseMC = kFALSE;
913 kUseTR = kFALSE;
914 kUseAODTags = kFALSE;
915 if (iESDfilter)
916 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "ESD filter disabled in analysis on AOD's");
917 iESDfilter = 0;
e84da0a5 918 if (iPhysicsSelection)
919 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "Physics Selection disabled in analysis on AOD's");
920 iPhysicsSelection = 0;
c38e3b95 921 if (!iAODhandler) {
922 if (iJETAN)
923 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "JETAN disabled in analysis on AOD's without AOD handler");
924 iJETAN = 0;
925 iDIJETAN = 0;
926 }
927 // Disable tasks that do not work yet on AOD data
58ef946c 928 if(iPWG4JCORRAN)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 JCORRAN disabled in analysis on AOD's");
4d62ae1a 929 iPWG4JCORRAN = 0;
c38e3b95 930 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
931 iPWG4PtQAMC = 0;
932 if( iPWG4PtQATPC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtTPC disabled in analysis on AOD's");
933 iPWG4PtQATPC = 0;
1f329128 934 if( iPWG4Cosmics)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Comics disabled in analysis on AOD's");
935 iPWG4Cosmics = 0;
936
c38e3b95 937 if( iPWG4PtSpectra)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
938 iPWG4PtSpectra = 0;
b53f2e4f 939 if(iPWG4KMeans)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4KMeans disabled on AOD's");
940 iPWG4KMeans = 0;
d2e6cdd5 941 if (iPWG4JetCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4Jetcorr disabled on AOD's");
942 iPWG4JetCorr = 0;
c38e3b95 943 if (iPWG4PartCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4partcorr disabled on AOD's");
944 iPWG4PartCorr = 0;
d2e6cdd5 945 if (iPWG4CaloQA)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4CaloQA disabled on AOD's");
946 iPWG4CaloQA = 0;
911a740f 947 if (iPWG4Tagged)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4tagged disabled on AOD's");
948 iPWG4Tagged = 0;
121e4bd5 949 if (iPWG4omega3pi)
950 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG4omega3pi disabled on AOD's");
951 iPWG4omega3pi = 0;
c38e3b95 952 if(iPWG1QASym)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG1 QA Sym disabled in analysis on AOD's");
53c63663 953 if (iPWG4GammaConv)::Info("AnalysisPWG4Jets.C::CheckModuleFlags", "PWG4gammaconv disabled on AOD's");
954 iPWG4GammaConv = 0;
c38e3b95 955 iPWG1QASym = 0;
956 } else {
957 // ESD analysis
958 if (!kUseMC){
959 kUseTR = kFALSE;
960
961 if(kUseKinefilter)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Kine Filter disabled in analysis without MC");
962 kUseKinefilter = kFALSE;
963 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis without MC");
964 iPWG4PtQAMC = 0;
9748e967 965 if( iPWG4CorrectionsUE)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 CorrectionsUE disabled in analysis without MC");
966 iPWG4CorrectionsUE = 0;
c38e3b95 967 }
968 if (!kUseTR) {
c166d299 969 if(iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "iPWG4QATPCMC disabled if not reading track references");
b03b08a3 970 iPWG4PtQAMC = 0;
c38e3b95 971 }
e84da0a5 972 if (iJETAN){
973 iESDfilter=1;
974 }
c38e3b95 975 if (!iESDfilter){
976 kUseKinefilter = kFALSE;
977 kUseMuonfilter = kFALSE;
978 }
979 if(!iJETAN){
cc636095 980 iPWG4JetSpectrum = iPWG4UE = iPWG4CorrectionsUE = iPWG4ThreeJets = iPWG4QGSep = iDIJETAN = 0;
c38e3b95 981 }
982 }
cc636095 983 iPWG4JetTasks = iPWG4JetServices||iPWG4JetSpectrum||iPWG4UE||iPWG4LeadingUE||iPWG4PtQAMC||iPWG4PtSpectra||iPWG4PtQATPC||iPWG4Cosmics||iPWG4ThreeJets||iPWG4QGSep||iPWG4JetChem||iPWG4Minijet||iPWG4Fragmentation;
d2e6cdd5 984 iPWG4PartCorrLibs = iPWG4PartCorr||iPWG4Tagged||iPWG4CaloQA;
17d96675 985 iPWG4GammaConvLib = iPWG4GammaConv||iPWG4CaloConv;
986
987
988 iEMCUtilLibs = iPWG4PartCorrLibs||iPWG4JCORRAN||iPWG4GammaConvLib;
e6993a52 989 iJETANLib = iPWG4JetTasks||iJETAN||iDIJETAN;
17d96675 990
c38e3b95 991 if (iESDfilter) {iAODhandler=1;}
992 if (kUseKinefilter && !kUseMC) kUseKinefilter = kFALSE;
993 if (kUseAODTags && !iAODhandler) kUseAODTags = kFALSE;
994
995
996
997}
998
999//______________________________________________________________________________
1000Bool_t Connect(const char *mode) {
1001// Connect <username> to the back-end system.
1002 Int_t imode = -1;
1003 if (!strcmp(mode, "LOCAL")) imode = 0;
1004 if (!strcmp(mode, "PROOF")) imode = 1;
1005 if (!strcmp(mode, "GRID")) imode = 2;
1006 TString username = gSystem->Getenv("alien_API_USER");
1007 switch (imode) {
1008 case 0:
1009 break;
1010 case 1:
1011 if (!username.Length()) {
1012 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1013 1. Have called: alien-token-init <username>\n \
1014 2. Have called: >source /tmp/gclient_env_$UID");
1015 return kFALSE;
1016 }
1017 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to PROOF cluster <%s>",
1018 username.Data(), kProofCluster.Data());
1019 gEnv->SetValue("XSec.GSI.DelegProxy", "2");
1020// TProof::Open(Form("%s@%s:31093", username.Data(), kProofCluster.Data()));
1021 TProof::Open(Form("%s@%s", username.Data(), kProofCluster.Data()));
1022 if (!gProof) {
1023 if (strcmp(gSystem->Getenv("XrdSecGSISRVNAMES"), "lxfsrd0506.cern.ch"))
1024 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Environment XrdSecGSISRVNAMES different from lxfsrd0506.cern.ch");
1025 return kFALSE;
1026 }
1027 if(kProofClearPackages)gProof->ClearPackages();
1028
1029 if(kProofSaveToAlien){
1030 TGrid::Connect("alien://");
1031 if (gGrid) {
1032 TString homedir = gGrid->GetHomeDirectory();
1033 TString workdir = homedir + kTrainName;
1034 if (!gGrid->Cd(workdir)) {
1035 gGrid->Cd(homedir);
1036 if (gGrid->Mkdir(workdir)) {
1037 gGrid->Cd(kTrainName);
1038 ::Info("AnalysisTrainPWG4Jets::Connect()", "Directory %s created", gGrid->Pwd());
1039 }
1040 }
1041 gGrid->Mkdir("proof_output");
1042 gGrid->Cd("proof_output");
1043 kProofOutdir = Form("alien://%s", gGrid->Pwd());
1044 }
1045 }
1046 break;
1047 case 2:
1048 if (!username.Length()) {
1049 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1050 1. Have called: alien-token-init <username>\n \
1051 2. Have called: >source /tmp/gclient_env_$UID");
1052 return kFALSE;
1053 }
1054 if (kPluginUse && !gSystem->Getenv("alien_CLOSE_SE")) {
1055 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode),
1056 "When using the AliEn plugin it is preferable to define the \
1057 variable alien_CLOSE_SE in your environment.");
1058 return kFALSE;
1059 }
1060 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to AliEn ...",
1061 username.Data());
1062 TGrid::Connect("alien://");
1063 if (!gGrid || !gGrid->IsConnected()) return kFALSE;
1064 break;
1065 default:
1066 ::Error("AnalysisTrainPWG4Jets.C::Connect", "Unknown run mode: %s", mode);
1067 return kFALSE;
1068 }
1069 ::Info("AnalysisTrainPWG4Jets.C::Connect","Connected in %s mode", mode);
1070 return kTRUE;
1071}
1072
1073//______________________________________________________________________________
1074Bool_t LoadCommonLibraries(const char *mode)
1075{
1076// Load common analysis libraries.
1077 Int_t imode = -1;
1078 if (!strcmp(mode, "LOCAL")) imode = 0;
1079 if (!strcmp(mode, "PROOF")) imode = 1;
1080 if (!strcmp(mode, "GRID")) imode = 2;
1081 if (!gSystem->Getenv("ALICE_ROOT")) {
ebad39a9 1082 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Analysis train requires that ALICE_ROOT is set to pick up Configurations");
c38e3b95 1083 return kFALSE;
1084 }
1085 Bool_t success = kTRUE;
1086 // ROOT libraries
1087 gSystem->Load("libTree.so");
1088 gSystem->Load("libGeom.so");
1089 gSystem->Load("libVMC.so");
1090 gSystem->Load("libPhysics.so");
1091
1092 // Load framework classes. Par option ignored here.
1093 switch (imode) {
1094 case 0:
1095 case 2:
1096 if (kUseCPAR) {
1097 success &= LoadLibrary("STEERBase", mode, kTRUE);
1098 success &= LoadLibrary("ESD", mode, kTRUE);
1099 success &= LoadLibrary("AOD", mode, kTRUE);
1100 success &= LoadLibrary("ANALYSIS", mode, kTRUE);
1101 success &= LoadLibrary("ANALYSISalice", mode, kTRUE);
1102 success &= LoadLibrary("CORRFW", mode, kTRUE);
1103 } else {
1104 success &= LoadLibrary("libSTEERBase.so", mode);
1105 success &= LoadLibrary("libESD.so", mode);
1106 success &= LoadLibrary("libAOD.so", mode);
1107 success &= LoadLibrary("libANALYSIS.so", mode);
1108 success &= LoadLibrary("libANALYSISalice.so", mode);
1109 success &= LoadLibrary("libCORRFW.so", mode);
1110 gROOT->ProcessLine(".include $ALICE_ROOT/include");
1111 }
1112 break;
1113 case 1:
1114 Int_t ires = -1;
1115 if (kProofUseAFPAR && !gSystem->AccessPathName(kProofAFversion)) ires = gProof->UploadPackage(kProofAFversion);
1116 if (ires < 0) {
1117 success &= LoadLibrary("STEERBase", mode);
1118 success &= LoadLibrary("ESD", mode);
1119 success &= LoadLibrary("AOD", mode);
1120 success &= LoadLibrary("ANALYSIS", mode);
1121 success &= LoadLibrary("ANALYSISalice", mode);
1122 success &= LoadLibrary("CORRFW", mode);
1123 } else {
1124 ires = gProof->EnablePackage(kProofAFversion);
1125 if (ires<0) success = kFALSE;
1126 success &= LoadLibrary("CORRFW", mode);
1127 }
1128 break;
1129 default:
1130 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Unknown run mode: %s", mode);
1131 return kFALSE;
1132 }
1133 if (success) {
1134 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: SUCCESS");
1135 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Include path for Aclic compilation:\n%s",
1136 gSystem->GetIncludePath());
1137 } else {
1138 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: FAILED");
1139 }
1140
1141 return success;
1142}
1143
1144//______________________________________________________________________________
1145Bool_t LoadAnalysisLibraries(const char *mode)
1146{
1147// Load common analysis libraries.
9748e967 1148 Bool_t success = kTRUE;
cfd02305 1149 if (useTender) {
1150 if (!LoadLibrary("TENDER", mode, kTRUE) ||
1151 !LoadLibrary("TENDERSupplies", mode, kTRUE)) return kFALSE;
1152 }
c38e3b95 1153 if (iESDfilter) {
b0a36f28 1154 /*
c38e3b95 1155 if (!LoadLibrary("PWG3base", mode, kTRUE) ||
1156 !LoadLibrary("PWG3muon", mode, kTRUE)) return kFALSE;
b0a36f28 1157 */
c38e3b95 1158 }
1159 // JETAN
e6993a52 1160 if (iJETANLib) {
b53f2e4f 1161 // this part needs some rework in case we do not need the fastjed finders for processing
1162 if (!LoadLibrary("JETAN", mode, kTRUE)) return kFALSE;
c38e3b95 1163 if (!strcmp(mode, "PROOF")){
ef1e462f 1164 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libCGAL.so\"\)", kTRUE);
c38e3b95 1165 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libfastjet.so\"\)", kTRUE);
1166 // problem when loading siscone copiled with different gcc version??
1167 // gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libsiscone.so\"\)", kTRUE);
1168 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libSISConePlugin.so\"\)", kTRUE);
1169 }
b53f2e4f 1170 if(!kUsePAR){
e84da0a5 1171 if (!LoadLibrary("CGAL", mode, kTRUE)) return kFALSE;
1172 if (!LoadLibrary("fastjet", mode, kTRUE)) return kFALSE;
1173 if (!LoadLibrary("siscone", mode, kTRUE)) return kFALSE;
1174 if (!LoadLibrary("SISConePlugin", mode, kTRUE)) return kFALSE;
1175 }
1176 else{
1177 // par files plus FASTJET needs some extra work... need to change
1178 // the loading sequence in the auto generated .C file
1179 if (!LoadLibrary("libCGAL.so", mode, kTRUE)) return kFALSE;
1180 if (!LoadLibrary("libfastjet.so", mode, kTRUE)) return kFALSE;
1181 if (!LoadLibrary("libsiscone.so", mode, kTRUE)) return kFALSE;
1182 if (!LoadLibrary("libSISConePlugin.so", mode, kTRUE)) return kFALSE;
1183 }
c38e3b95 1184 if (!LoadLibrary("FASTJETAN", mode, kTRUE)) return kFALSE;
1185 }
1186 if(iPWG4JetTasks){
c38e3b95 1187 if (!LoadLibrary("PWG4JetTasks", mode, kTRUE)) return kFALSE;
1188 }
58ef946c 1189
c38e3b95 1190 if(iPWG1QASym){
99bfd7f7 1191 if (!LoadSource(Form("%s/PWG1/AliAnalysisTaskQASym.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
c38e3b95 1192 }
121e4bd5 1193 if(iPWG4TmpSourceSara){
c166d299 1194 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
121e4bd5 1195 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskEta.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1196 }
58ef946c 1197
9f77f0ce 1198 /*
1199 if(iPWG4JetChem){
c580ebbb 1200 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
1201 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskJetChem.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1202 }
9f77f0ce 1203 */
c166d299 1204
4721d8c5 1205 if(iEMCUtilLibs){
1206 if (!LoadLibrary("EMCALUtils", mode, kTRUE) ||
1207 !LoadLibrary("PHOSUtils", mode, kTRUE)) return kFALSE;
1208 }
1209
911a740f 1210 if (iPWG4PartCorrLibs) {
4721d8c5 1211 if (!LoadLibrary("PWG4PartCorrBase", mode, kTRUE) ||
c38e3b95 1212 !LoadLibrary("PWG4PartCorrDep", mode, kTRUE)) return kFALSE;
1213 }
4721d8c5 1214 if(iPWG4JCORRAN){
1215 // PWG4 particle correlations
1216 if(!LoadLibrary("PWG4JCORRAN",mode,kTRUE))return kFALSE;
1217 }
d2e6cdd5 1218 if (iPWG4JetCorr) {
1219 if (!LoadLibrary("PWG4JetCorrel", mode, kTRUE)) return kFALSE;
1220 }
121e4bd5 1221 if (iPWG4omega3pi) {
1222 if (!LoadLibrary("PWG4omega3pi", mode, kTRUE)) return kFALSE;
1223 }
17d96675 1224 if (iPWG4GammaConvLib) {
53c63663 1225 if (!LoadLibrary("PWG4GammaConv", mode, kTRUE)) return kFALSE;
1226 }
c38e3b95 1227
1228 ::Info("AnalysisTrainPWG4Jets.C::LoadAnalysisLibraries", "Load other libraries: SUCCESS");
1229 return kTRUE;
1230}
1231
1232//______________________________________________________________________________
1233Bool_t LoadLibrary(const char *module, const char *mode, Bool_t rec=kFALSE)
1234{
1235// Load a module library in a given mode. Reports success.
1236 Int_t imode = -1;
1237 Int_t result;
1238 TString smodule(module);
1239 if (!strcmp(mode, "LOCAL")) imode = 0;
1240 if (!strcmp(mode, "PROOF")) imode = 1;
1241 if (!strcmp(mode, "GRID")) imode = 2;
1242 TString mod(module);
1243 if (!mod.Length()) {
1244 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Empty module name");
1245 return kFALSE;
1246 }
1247 // If a library is specified, just load it
1248 if (smodule.EndsWith(".so")) {
1249 mod.Remove(mod.Index(".so"));
1250 result = gSystem->Load(mod);
1251 if (result < 0) {
1252 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load library %s", module);
1253 return kFALSE;
1254 }
1255 if (rec) anaLibs += Form("%s.so ",mod.Data());
e84da0a5 1256 if (rec) anaLibsExtra += Form("%s.so ",mod.Data());
c38e3b95 1257 return kTRUE;
1258 }
1259 // Check if the library is already loaded
1260 if (strlen(gSystem->GetLibraries(Form("%s.so", module), "", kFALSE)) > 0)
1261 return kTRUE;
1262 switch (imode) {
1263 case 0:
1264 case 2:
1265 if (kUsePAR) {
1266 result = SetupPar(module);
1267 if (rec) anaPars += Form("%s.par ", module);
1268 } else {
1269 result = gSystem->Load(Form("lib%s.so", module));
1270 if (rec) anaLibs += Form("lib%s.so ", module);
1271 }
1272 break;
1273 case 1:
1274 if(!gSystem->AccessPathName(module)){
1275 ::Info("AnalysisTrainPWG4Jets.C::LoadLibrary", "Removing directory %s",module);
1276 gSystem->Exec(Form("rm -rf %s",module));
1277 }
1278 result = gProof->UploadPackage(module);
1279 if (result<0) {
1280 result = gProof->UploadPackage(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", module)));
1281 if (result<0) {
1282 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not find module %s.par in current directory nor in $ALICE_ROOT", module);
1283 return kFALSE;
1284 }
1285 }
1286 result = gProof->EnablePackage(module);
1287 break;
1288 default:
1289 return kFALSE;
1290 }
1291 if (result < 0) {
1292 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load module %s", module);
1293 return kFALSE;
1294 }
1295 return kTRUE;
1296}
1297
1298
1299
1300//______________________________________________________________________________
1301Bool_t LoadSource(const char *source, const char *mode, Bool_t rec=kFALSE)
1302{
1303// Load a module library in a given mode. Reports success.
1304 Int_t imode = -1;
1305 Int_t result = -1;
1306 if (!strcmp(mode, "LOCAL")) imode = 0;
1307 if (!strcmp(mode, "PROOF")) imode = 1;
1308 if (!strcmp(mode, "GRID")) imode = 2;
1309 TString ssource(source);
1310 TString basename = gSystem->BaseName(ssource.Data());
1311 if (!ssource.Length()) {
1312 ::Error("AnalysisTrainPWG4Jets.C::LoadSource", "Empty task name");
1313 return kFALSE;
1314 }
4d62ae1a 1315 // we have a source code so compile it
c38e3b95 1316 if (ssource.EndsWith(".cxx")) {
1317 // need to copy it here other wise the path is also used on grid...
1318 ssource.Remove(ssource.Index(".cxx"));
1319 basename.Remove(basename.Index(".cxx"));
1320 Printf("LoadSources:: Copying... path %s{cxx,h}",ssource.Data());
1321 gSystem->Exec(Form("cp %s.cxx . ",ssource.Data()));
1322 gSystem->Exec(Form("cp %s.h . ",ssource.Data()));
1323 // Path to code
1324 // only needed for local compilation, in grid and proof mode
1325 // the task headers are uploaded
1326 // path.Remove(path.Index(gSystem->BaseName(path.Data())));
1327 // Printf("LoadSources:: Including path %s",path.Data());
1328 // if(path.Length()>0)gROOT->ProcessLine(Form(".include %s",path.Data()));
1329 Printf("LoadSources:: Loading... path %s",basename.Data());
1330 switch (imode) {
1331 case 0:
b53f2e4f 1332 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1333 break;
1334 case 1:
b53f2e4f 1335 result = gProof->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1336 break;
1337 case 2:
b53f2e4f 1338 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1339 if (rec){
1340 // what we want to compile
1341 anaSources += Form("%s.cxx ",basename.Data());
1342 // what we need as input...
1343 anaLibs += Form("%s.cxx %s.h ",basename.Data(),basename.Data());
1344 }
1345 break;
1346 default:
1347 return kFALSE;
1348 }
1349 }
1350 if (result < 0) {
1351 ::Error("AnalysisTrainPWG4Jets.C::LoadSources", "Could not load source %s", source);
1352 return kFALSE;
1353 }
1354 return kTRUE;
1355}
1356
1357
1358//______________________________________________________________________________
1359TChain *CreateChain(const char *mode, const char *plugin_mode)
1360{
1361// Create the input chain
1362 Int_t imode = -1;
1363 if (!strcmp(mode, "LOCAL")) imode = 0;
1364 if (!strcmp(mode, "PROOF")) imode = 1;
1365 if (!strcmp(mode, "GRID")) imode = 2;
1366 TChain *chain = NULL;
1367 // Local chain
1368 switch (imode) {
1369 case 0:
1370 if (iAODanalysis) {
1371 if (!kLocalXMLDataset.Length()) {
1372 // Local AOD
1373 chain = new TChain("aodTree");
1374 TString line;
1375 ifstream in;
1376 in.open(kLocalDataList.Data());
1377 while (in.good()) {
1378 in >> line;
1379 if (line.Length() == 0) continue;
1380 // cout << " line = " << line << endl;
1381 chain->Add(line.Data());
1382 }
1383 } else {
1384 // Interactive AOD
1385 chain = CreateChainSingle(kLocalXMLDataset, "aodTree");
1386 }
1387 } else {
1388 if (!kLocalXMLDataset.Length()) {
1389 // Local ESD
1390 chain = new TChain("esdTree");
1391 TString line;
1392 ifstream in;
1393 in.open(kLocalDataList.Data());
1394 while (in.good()) {
1395 in >> line;
1396 if (line.Length() == 0) continue;
1397 cout << " line = " << line << endl;
1398 chain->Add(line.Data());
1399 }
1400 } else {
1401 // Interactive ESD
1402 chain = CreateChainSingle(kLocalXMLDataset, "esdTree");
1403 }
1404 }
1405 break;
1406 case 1:
1407 break;
1408 case 2:
1409 if (kPluginUse) {
1410// AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1411// AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1412 } else {
1413 TString treeName = "esdTree";
1414 if (iAODanalysis) treeName = "aodTree";
1415 chain = CreateChainSingle("wn.xml", treeName);
1416 }
1417 break;
1418 default:
1419 }
1420 if (chain && chain->GetNtrees()) return chain;
1421 return NULL;
1422}
1423
1424//______________________________________________________________________________
1425TChain* CreateChainSingle(const char* xmlfile, const char *treeName)
1426{
1427 printf("*******************************\n");
1428 printf("*** Getting the ESD Chain ***\n");
1429 printf("*******************************\n");
1430 TAlienCollection * myCollection = TAlienCollection::Open(xmlfile);
1431
1432 if (!myCollection) {
1433 ::Error("AnalysisTrainPWG4Jets.C::CreateChainSingle", "Cannot create an AliEn collection from %s", xmlfile) ;
1434 return NULL ;
1435 }
1436
1437 TChain* chain = new TChain(treeName);
1438 myCollection->Reset() ;
1439 while ( myCollection->Next() ) chain->Add(myCollection->GetTURL("")) ;
1440 chain->ls();
1441 return chain;
1442}
1443
1444//______________________________________________________________________________
1445Int_t SetupPar(char* pararchivename)
1446{
1447 if (!pararchivename || !strlen(pararchivename)) return -1;
1448 char processline[1024];
1449 if (gSystem->AccessPathName(Form("%s.par", pararchivename))) {
1450 if (!gSystem->AccessPathName(Form("%s/%s.par", gSystem->Getenv("ALICE_ROOT"),pararchivename))) {
1451 ::Info("AnalysisTrainPWG4Jets.C::SetupPar", "Getting %s.par from $ALICE_ROOT", pararchivename);
9748e967 1452 TFile::Cp(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", pararchivename)),
1453 Form("%s.par",pararchivename));
c38e3b95 1454 } else {
1455 ::Error("AnalysisTrainPWG4Jets.C::SetupPar", "Cannot find %s.par", pararchivename);
1456 return -1;
1457 }
1458 }
1459 if (kPluginUse && kSaveTrain) gSystem->Exec(Form("ln -s ../%s.par %s",pararchivename, kTrainName.Data()));
1460 gSystem->Exec(Form("tar xvzf %s.par", pararchivename));
1461
1462 TString ocwd = gSystem->WorkingDirectory();
1463 if (!gSystem->ChangeDirectory(pararchivename)) return -1;
1464
1465 // check for BUILD.sh and execute
1466 if (!gSystem->AccessPathName("PROOF-INF/BUILD.sh")) {
1467 printf("*******************************\n");
1468 printf("*** Building PAR archive ***\n");
1469 printf("*******************************\n");
1470 if (gSystem->Exec("PROOF-INF/BUILD.sh")) {
1471 Error("runProcess","Cannot Build the PAR Archive! - Abort!");
1472 return -1;
1473 }
1474 }
1475
1476 // check for SETUP.C and execute
1477 if (!gSystem->AccessPathName("PROOF-INF/SETUP.C")) {
1478 printf("*******************************\n");
1479 printf("*** Setup PAR archive ***\n");
1480 printf("*******************************\n");
1481 gROOT->Macro("PROOF-INF/SETUP.C");
1482 }
1483 if (!gSystem->ChangeDirectory(ocwd.Data())) return -1;
1484 return 0;
1485}
1486
1487//______________________________________________________________________________
1488AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode)
1489{
1490// Check if user has a valid token, otherwise make one. This has limitations.
1491// One can always follow the standard procedure of calling alien-token-init then
1492// source /tmp/gclient_env_$UID in the current shell.
c8fb37dd 1493// if (!AliAnalysisGrid::CreateToken()) return NULL;
c38e3b95 1494 AliAnalysisAlien *plugin = new AliAnalysisAlien();
1495// Set the run mode (can be "full", "test", "offline", "submit" or "terminate")
1496 plugin->SetRunMode(plugin_mode);
1497 if (kPluginUseProductionMode) plugin->SetProductionMode();
1498 plugin->SetJobTag(kJobTag);
e0c120d9 1499 plugin->SetNtestFiles(1);
c38e3b95 1500// plugin->SetPreferedSE("ALICE::NIHAM::File");
1501// Set versions of used packages
e84da0a5 1502 plugin->SetAPIVersion("V1.1x");
1503 // plugin->SetAPIVersion("V1.0x");
1504// plugin->SetAPIVersion("V2.4");
c38e3b95 1505 plugin->SetROOTVersion(kPluginRootVersion);
1506 plugin->SetAliROOTVersion(kPluginAliRootVersion);
1507// Declare input data to be processed.
1508// Method 1: Create automatically XML collections using alien 'find' command.
1509// Define production directory LFN
1510 plugin->SetGridDataDir(kGridDatadir.Data());
1511// Set data search pattern
1512 if (iAODanalysis) plugin->SetDataPattern(" *AliAOD.root");
c8fb37dd 1513 // else plugin->SetDataPattern(Form(" %s/*/*ESD.tag.root",kGridPassPattern.Data()));
1514 else plugin->SetDataPattern(Form(" %s/*/*AliESDs.root",kGridPassPattern.Data()));
c38e3b95 1515// ...then add run numbers to be considered
1516// plugin->SetRunRange(kGridRunRange[0], kGridRunRange[1]);
1517 for (Int_t i=kGridRunRange[0]; i<=kGridRunRange[1]; i++) {
1518 Printf("AnalysisTrainPWG4Jets Adding run number %s", Form(kGridRunPattern.Data(),i));
1519 plugin->AddRunNumber(Form(kGridRunPattern.Data(),i));
1520 }
1521
1522 if(kGridLocalRunList.Length()>0){
1523 ifstream in1;
1524 in1.open(kGridLocalRunList.Data());
1525 int iRun;
9a5c5b1e 1526
1527 /*
e84da0a5 1528 char c;
1529 char cLine[250];
1530 while(!in1.eof()){
1531 c = in1.get();
1532 if ( (c >= '0') && (c <= '9') )
1533 {
1534 in1.putback (c);
1535 in1>>iRun;
1536 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1537 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
1538 }
1539 else
1540 {
1541 in1.putback (c);
1542 in1.getline(cLine,250);
9a5c5b1e 1543
1544 }
1545 }
1546 */
9748e967 1547
1548 Int_t nRun = 0;
9a5c5b1e 1549
1550 // just use run numbers, negatives will be excluded
1551 while(in1>>iRun){
9748e967 1552
4d5d766e 1553 if(iRun>=0&&(nRun<kGridMaxRunsFromList)){
9a5c5b1e 1554 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1555 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
9748e967 1556 nRun++;
9a5c5b1e 1557 }
1558 else{
1559 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d", iRun);
e84da0a5 1560 }
c38e3b95 1561 }
1562 }
1563
1564// Method 2: Declare existing data files (raw collections, xml collections, root file)
1565// If no path mentioned data is supposed to be in the work directory (see SetGridWorkingDir())
1566// XML collections added via this method can be combined with the first method if
1567// the content is compatible (using or not tags)
1568// plugin->AddDataFile("tag.xml");
1569// plugin->AddDataFile("/alice/data/2008/LHC08c/000057657/raw/Run57657.Merged.RAW.tag.root");
1570// Define alien work directory where all files will be copied. Relative to alien $HOME.
3878a941 1571 TString alien_workdir = "";
1572
1573 if (iAODanalysis) alien_workdir += "analysisAOD";
1574 else alien_workdir += "analysisESD";
1575 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
1576 plugin->SetGridWorkingDir(alien_workdir.Data());
1577
c38e3b95 1578 // Declare alien output directory. Relative to working directory.
1579 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
1580 plugin->SetGridOutputDir(kGridOutdir);
1581
1582 // Add external packages
1583 if (iJETAN||iDIJETAN) {
23adcac8 1584 plugin->AddExternalPackage("boost::v1_43_0");
1585 plugin->AddExternalPackage("cgal::v3.6");
1586 plugin->AddExternalPackage("fastjet::v2.4.2");
c38e3b95 1587 }
1588
1589
1590 // set extra libs before par file compilation
1591 anaLibs += kGridExtraFiles;
1592 anaLibs = anaLibs.Strip();
e84da0a5 1593 Printf("anaLibs %s",anaLibs.Data());
1594 Printf("anaLibsExtra %s",anaLibsExtra.Data());
1595
1596 if (anaLibs.Length()) plugin->SetAdditionalLibs(anaLibs.Data());
1597 if (anaLibsExtra.Length()) plugin->SetAdditionalRootLibs(anaLibsExtra.Data());
c38e3b95 1598
1599 TString ana_sources = "";
1600 TString ana_add = "";
1601 if (kUsePAR && anaPars.Length()) {
1602 printf("%s\n", anaPars.Data());
1603 TObjArray *arr;
1604 TObjString *objstr;
1605 arr = anaPars.Tokenize(" ");
1606 TIter next(arr);
1607 while ((objstr=(TObjString*)next())) plugin->EnablePackage(objstr->GetString());
1608 delete arr;
1609 }
1610
1611// Declare the analysis source files names separated by blancs. To be compiled runtime
1612// using ACLiC on the worker nodes.
1613 ana_sources = anaSources.Strip();
1614// Declare all libraries (other than the default ones for the framework. These will be
1615// loaded by the generated analysis macro. Add all extra files (task .cxx/.h) here.
1616
1617 if (ana_sources.Length()) plugin->SetAnalysisSource(ana_sources);
1618 plugin->SetExecutableCommand(kPluginExecutableCommand.Data());
4721d8c5 1619 // Declare the output file names separated by blancs.
1620 // (can be like: file.root or file.root@ALICE::Niham::File)
c38e3b95 1621 plugin->SetMergeExcludes(kGridMergeExclude);
1622 plugin->SetMaxMergeFiles(kGridMaxMergeFiles);
1623 plugin->SetNrunsPerMaster(kGridRunsPerMaster);
9a5c5b1e 1624 plugin->SetMergeViaJDL(kPluginMergeViaJDL);
4721d8c5 1625 // Use fastread option
9a5c5b1e 1626 plugin->SetFastReadOption(kPluginFastReadOption);
4721d8c5 1627 // UseOverwrite mode
9a5c5b1e 1628 plugin->SetOverwriteMode(kPluginOverwriteMode);
4721d8c5 1629 // Optionally define the files to be archived.
1630 // plugin->SetOutputArchive("log_archive.zip:stdout,stderr@ALICE::NIHAM::File root_archive.zip:AliAOD.root,AOD.tag.root@ALICE::NIHAM::File");
dc6a7461 1631 plugin->SetOutputToRunNo(kPluginOutputToRunNumber); // write the output to subdirs named after run number
c38e3b95 1632
1633 // Put default output files to archive
1634 TString listhists = "";
1635 TString listaods = "";
1636 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1637 TIter next(mgr->GetOutputs());
1638 AliAnalysisDataContainer *output;
1639 while ((output=(AliAnalysisDataContainer*)next())) {
1640 const char *filename = output->GetFileName();
1641 if (!(strcmp(filename, "default"))) {
53c63663 1642 if (!mgr->GetOutputEventHandler()) continue;
c38e3b95 1643 filename = mgr->GetOutputEventHandler()->GetOutputFileName();
e84da0a5 1644 if (listaods.Length()) listaods += " ";
c38e3b95 1645 listaods += filename;
c38e3b95 1646 } else {
e84da0a5 1647 if(!listhists.Contains(filename)){
1648 if (listhists.Length()) listhists += " ";
c38e3b95 1649 listhists += filename;
1650 }
1651 }
1652 }
53c63663 1653
53c63663 1654 if (mgr->GetExtraFiles().Length()) {
e84da0a5 1655 if (listaods.Length()) listaods += " ";
53c63663 1656 listaods += mgr->GetExtraFiles();
c38e3b95 1657 }
53c63663 1658
1659 // if we do not fill the aod we do not need to store it
4721d8c5 1660 // kGridMergeExclude = listaods;
e84da0a5 1661
4721d8c5 1662 if(kSaveAOD!=0){
1663 TString outputFiles = "";
1664 outputFiles += mgr->GetExtraFiles();
1665 if (listhists.Length()) outputFiles += " ";
1666 outputFiles += listhists;
e84da0a5 1667 plugin->SetDefaultOutputs(kFALSE);
4721d8c5 1668 Printf("%s:%d Starting with the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
1669 // remove
1670 // no harm done when we try to remove something that is not there :)
1671 if(!(kSaveAOD&(1<<0))){
1672 outputFiles.ReplaceAll("AliAOD.root ","");
1673 listaods.ReplaceAll("AliAOD.root ","");
1674 }
1675 if(!(kSaveAOD&(1<<1))){
1676 if(kDeltaAODJetName.Length())outputFiles.ReplaceAll(kDeltaAODJetName.Data(),"");
1677 if(kDeltaAODJetName.Length())listaods.ReplaceAll(kDeltaAODJetName.Data(),"");
1678
1679 }
1680 if(!(kSaveAOD&(1<<2))){
1681 if(kDeltaAODPartCorrName.Length())outputFiles.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
1682 if(kDeltaAODPartCorrName.Length())listaods.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
1683 }
1684 if(!(kSaveAOD&(1<<3))){
1685 if(kDeltaAODJCORRANName.Length())outputFiles.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
1686 if(kDeltaAODJCORRANName.Length())listaods.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
1687 }
1688
1689 //
1690 Printf("%s:%d Saving the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
1691 plugin->SetOutputFiles(outputFiles.Data());
e84da0a5 1692 }
53c63663 1693
4721d8c5 1694 TString outputArchive;
4d5d766e 1695 outputArchive = Form("log_archive.zip:std*@%s","disk=1");
e84da0a5 1696 listaods.ReplaceAll(" ", ",");
1697 listhists.ReplaceAll(" ", ",");
4d5d766e 1698 if (listhists.Length()){
1699 outputArchive += " ";
1700 outputArchive += "root_archive.zip:";
1701 outputArchive += listhists;
1702 if (listaods.Length()){
1703 outputArchive += ",";
1704 outputArchive += listaods;
1705 }
1706 outputArchive += Form("@%s", kGridOutputStorages.Data());
1707 }
1708 else{
1709
1710 if (listaods.Length()){
1711 // we have only aod'ish output
1712 outputArchive += " ";
1713 outputArchive += "root_archive.zip:";
1714 outputArchive += listaods;
1715 outputArchive += Form("@%s", kGridOutputStorages.Data());
1716 }
1717 else{
1718 // no other outputs than std..
c38e3b95 1719 ::Fatal("AnalysisTrainPWG4Jets", "No task output !");
4d5d766e 1720 }
c38e3b95 1721 }
4d5d766e 1722
17d96675 1723 plugin->SetDefaultOutputs(kFALSE);
c38e3b95 1724 plugin->SetOutputArchive(outputArchive);
17d96675 1725
4721d8c5 1726
4d5d766e 1727 // Optionally set a name for the generated analysis macro (default MyAnalysis.C)
c38e3b95 1728 plugin->SetAnalysisMacro(Form("%s.C", kTrainName.Data()));
4d5d766e 1729 // Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)
c38e3b95 1730 plugin->SetSplitMaxInputFileNumber(kGridFilesPerJob);
4d5d766e 1731 // Optionally set number of failed jobs that will trigger killing waiting sub-jobs.
27cdf9c4 1732 // plugin->SetMaxInitFailed(5);
4d5d766e 1733 // Optionally resubmit threshold.
c8fb37dd 1734 // plugin->SetMasterResubmitThreshold(90);
4d5d766e 1735 // Optionally set time to live (default 30000 sec)
17d96675 1736 plugin->SetTTL(50400); // 14h...
4d5d766e 1737 // Optionally set input format (default xml-single)
c38e3b95 1738 plugin->SetInputFormat("xml-single");
4d5d766e 1739 // Optionally modify the name of the generated JDL (default analysis.jdl)
c38e3b95 1740 plugin->SetJDLName(Form("%s.jdl", kTrainName.Data()));
4d5d766e 1741 // Optionally modify the executable name (default analysis.sh)
c38e3b95 1742 plugin->SetExecutable(Form("%s.sh", kTrainName.Data()));
4d5d766e 1743 // Optionally modify job price (default 1)
c38e3b95 1744 plugin->SetPrice(1);
4d5d766e 1745 // Optionally modify split mode (default 'se')
c38e3b95 1746 plugin->SetSplitMode("se");
1747 return plugin;
1748}
1749
1750//______________________________________________________________________________
1751void WriteConfig()
1752{
1753// Write train configuration in a file. The file name has the format:
1754// train_[trainName]_ddMonthyyyy_time.C
1755 if (kUseDate) {
1756 gSystem->Exec("date +%d%b%Y_%Hh%M > date.tmp");
1757 ifstream fdate("date.tmp");
1758 if (!fdate.is_open()) {
1759 ::Error("AnalysisTrainPWG4Jets.C::Export","Could not generate file name");
1760 return;
1761 }
1762 const char date[64];
1763 fdate.getline(date,64);
1764 fdate.close();
1765 gSystem->Exec("rm date.tmp");
1766 kTrainName = Form("train_%s_%s", kTrainName.Data(), date);
1767 } else {
1768 kTrainName = Form("train_%s", kTrainName.Data());
1769 }
1770 TString cdir = gSystem->WorkingDirectory();
1771 gSystem->MakeDirectory(kTrainName);
1772 gSystem->ChangeDirectory(kTrainName);
1773 ofstream out;
1774 out.open(Form("%sConfig.C",kTrainName.Data()), ios::out);
1775 if (out.bad()) {
1776 ::Error("AnalysisTrainPWG4Jets.C::Export", "Cannot open ConfigTrain.C for writing");
1777 return;
1778 }
1779 out << "{" << endl;
1780 out << " kTrainName = " << "\"" << kTrainName.Data() << "\";" << endl;
1781 out << " kProofCluster = " << "\"" << kProofCluster.Data() << "\";" << endl;
1782 out << " kProofUseAFPAR = " << kProofUseAFPAR << ";" << endl;
1783 if (kProofUseAFPAR)
1784 out << " kProofAFversion = " << kProofAFversion.Data() << ";" << endl;
1785 out << " kProofDataSet = " << "\"" << kProofDataSet.Data() << "\";" << endl;
1786 out << " kPluginUse = " << kPluginUse << ";" << endl;
1787 out << " kUsePAR = " << kUsePAR << ";" << endl;
1788 out << " kUseCPAR = " << kUseCPAR << ";" << endl;
1789 out << " kPluginRootVersion = " << "\"" << kPluginRootVersion.Data() << "\";" << endl;
1790 out << " kPluginAliRootVersion = " << "\"" << kPluginAliRootVersion.Data() << "\";" << endl;
1791 out << " kGridDatadir = " << "\"" << kGridDatadir.Data() << "\";" << endl;
1792 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
1793 out << " kGridOutdir = " << "\"" << kGridOutdir.Data() << "\";" << endl;
1794 out << " kGridMaxMergeFiles = " << kGridMaxMergeFiles << ";" << endl;
1795 out << " kGridMergeExclude = " << "\"" << kGridMergeExclude.Data() << "\";" << endl;
1796 out << " kGridRunsPerMaster = " << kGridRunsPerMaster << ";" << endl;
1797 out << " kGridFilesPerJob = " << kGridFilesPerJob << ";" << endl;
1798 out << " kGridRunRange[0] = " << kGridRunRange[0] << ";" << endl;
1799 out << " kGridRunRange[1] = " << kGridRunRange[1] << ";" << endl;
1800 out << " kUseDebug = " << kUseDebug << ";" << endl;
1801 out << " kUseMC = " << kUseMC << ";" << endl;
1802 out << " kUseESDTags = " << kUseESDTags << ";" << endl;
1803 out << " kUseKinefilter = " << kUseKinefilter << ";" << endl;
1804 out << " kUseTR = " << kUseTR << ";" << endl;
1805 out << " kUseAODTags = " << kUseAODTags << ";" << endl;
1806 out << " kSaveTrain = " << "kFALSE;" << endl << endl;
1807 out << " // Analysis modules" << endl;
1808 out << " iAODanalysis = " << iAODanalysis << ";" << endl;
1809 out << " iAODhandler = " << iAODhandler << ";" << endl;
1810 out << " iESDfilter = " << iESDfilter << ";" << endl;
1811 out << " iJETAN = " << iJETAN << ";" << endl;
1812 out << "// Configuration fot the wagons" << endl;
1813 out << "}" << endl;
1814 ::Info("AnalysisTrainPWG4Jets.C::WriteConfig", "Train configuration wrote to file %s", Form("config_%s.C", kTrainName.Data()));
1815 gSystem->ChangeDirectory(cdir);
1816}
1817
1818//______________________________________________________________________________
1819Bool_t LoadConfig(const char *filename)
1820{
1821// Read train configuration from file
1822 if (gSystem->AccessPathName(filename)) {
1823 ::Error("AnalysisTrainPWG4Jets.C::LoadConfig", "Config file name not found");
1824 return kFALSE;
1825 }
1826 gROOT->ProcessLine(Form(".x %s", filename));
1827 ::Info("AnalysisTrainPWG4Jets.C::LoadConfig", "Train configuration loaded from file %s", filename);
1828 return kTRUE;
1829}
1830
1831Bool_t PatchJDL(){
1832 Printf(">>> Patching JDL");
1833 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1834 AliAnalysisAlien* gridHandler = (AliAnalysisAlien*)mgr->GetGridHandler();
1835 TGridJDL *jdl = gridHandler->GetGridJDL();
1836 if(iJETAN)jdl->AddToPackages("fastjet","v2.4.0");
1837 gridHandler->WriteJDL(kFALSE);
0971dabc 1838 Printf("<<< Patching JDL");
c38e3b95 1839 return kTRUE;
1840}
1841
1842Bool_t PatchAnalysisMacro(){
4721d8c5 1843 Printf(">>> Patching AnalysisMacro");
1844 gSystem->Exec(Form("mv %s.C %s.C_tmp",kTrainName.Data(),kTrainName.Data()));
c38e3b95 1845
1846 ifstream in1;
1847 in1.open(Form("%s.C_tmp", kTrainName.Data()));
1848 char cLine[250];
1849 TString st;
1850 while(in1.getline(cLine,250)){
1851 st += cLine;
1852 st += "\n";
1853 }
4721d8c5 1854 Int_t index= -1;
c38e3b95 1855 index = st.Index("gSystem->Load(\"libPhysics\");");
1856 index += strlen("gSystem->Load(\"libPhysics\");");
4721d8c5 1857 /*
c38e3b95 1858 TObjArray *arr;
1859 TObjString *objstr;
1860 arr = anaLibs.Tokenize(" ");
1861 TIter next(arr);
4721d8c5 1862
c38e3b95 1863 add += "\n\n // added by CKB \n";
1864 while ((objstr=(TObjString*)next())){
e84da0a5 1865 if(objstr->GetString().Contains("PWG3"))continue;
c38e3b95 1866 if(objstr->GetString().EndsWith(".so"))add += Form("gSystem->Load(\"%s\");\n",objstr->GetString().Data());
1867 }
1868 delete arr;
4721d8c5 1869 */
3878a941 1870 // add += Form("AliLog::SetGlobalLogLevel(%d);\n",AliLog::GetGlobalLogLevel());
4721d8c5 1871 TString add = "";
1872
1873 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1874 add += "\n\n // added by CKB \n";
46534866 1875 if(kErrorIgnoreLevel>0)add += Form("gErrorIgnoreLevel = %d;\n",kErrorIgnoreLevel);
23adcac8 1876 add += "\n gSystem->AddIncludePath(\"./\"); \n";
4721d8c5 1877 if(gGrid&&kPluginAliRootVersion.Length()==0){
1878 add += "\n // Dirty hack for TRD reference data \n";
1879 add += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
1880 add += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
1881 add += "\"); \n";
c38e3b95 1882 }
4721d8c5 1883 add += "// BKC \n\n";
1884 st.Insert(index,add.Data());
e84da0a5 1885
1886 if(kUseDebug){
23adcac8 1887 // st.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
e84da0a5 1888 }
1889
4721d8c5 1890 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
1891 index = st.Index("gSystem->AddIncludePath(\"-I$"); // uncommen $ALICE_ROOT include for par files
1892 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1893 st.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
1894 }
c166d299 1895
46534866 1896 if(AliLog::GetGlobalLogLevel()==AliLog::kFatal){
1897 index = st.Index("AliLog::SetGlobal"); // ncomment setting of log level, do my own
1898 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1899 st.Insert(index,"AliLog::SetGlobalLogLevel(AliLog::kFatal);// CKB \n // CKB comment out for own setting \n //");
1900 }
1901
c38e3b95 1902 ofstream out;
1903 out.open(Form("%s.C", kTrainName.Data()));
1904 if (out.bad()) {
1905 return kFALSE;
1906 }
1907 out << st << endl;
1908 Printf("<<< Patching AnalysisMacro");
4721d8c5 1909
1910
1911
1912
1913
1914 Printf(">>> Patching Merge Macro");
1915 gSystem->Exec(Form("mv %s_merge.C %s_merge.C_tmp",kTrainName.Data(),kTrainName.Data()));
1916
1917 ifstream in2;
1918 in2.open(Form("%s_merge.C_tmp", kTrainName.Data()));
1919 TString st2;
1920 while(in2.getline(cLine,250)){
1921 st2 += cLine;
1922 st2 += "\n";
1923 }
1924 index = st2.Index("gSystem->Load(\"libPhysics\");");
1925 index += strlen("gSystem->Load(\"libPhysics\");");
1926 TString add2 = "";
23adcac8 1927 add2 += "\n gSystem->AddIncludePath(\"./\"); \n";
4721d8c5 1928 if(gGrid&&kPluginAliRootVersion.Length()==0){
1929 add2 += "\n // Dirty hack for TRD reference data \n";
1930 add2 += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
1931 add2 += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
1932 add2 += "\"); \n";
1933 }
1934 add2 += "// BKC \n\n";
1935 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1936 st2.Insert(index,add.Data());
1937
1938
1939 if(kUseDebug){
23adcac8 1940 // st2.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
4721d8c5 1941 }
1942
1943 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
46534866 1944 index = st2.Index("gSystem->AddIncludePath(\"-I$"); // uncomment $ALICE_ROOT include for par files
4721d8c5 1945 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1946 st2.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
1947 }
1948
1949 // do not exclude the extra files from merign, this is done explicitly in this train script
1950 index = st2.Index("mergeExcludes +="); // uncommen $ALICE_ROOT include for par files
1951 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1952 st2.Insert(index,"// CKB comment out, handled explicitly by the train macro \n //");
1953
1954
1955 ofstream out2;
1956 out2.open(Form("%s_merge.C", kTrainName.Data()));
1957 if (out2.bad()) {
1958 return kFALSE;
1959 }
1960 out2 << st2 << endl;
1961 Printf("<<< Patching Merging Macro");
1962
1963
1964
c38e3b95 1965 return kTRUE;
1966
1967}