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Added some methods for testing purpose
[u/mrichter/AliRoot.git] / PWG4 / macros / AnalysisTrainPWG4Jets.C
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c38e3b95 1//===================== ANALYSIS TRAIN =========================================
2// To use: copy this macro to your work directory, modify the global part to match
3// your needs, then run root.
4// root[0] .L AnalysisTrain.C
5// Grid full mode as below (other modes: test, offline, submit, terminate)
121e4bd5 6// root[1] AnalysisTrainPWG-244Jets("grid", "full")
c38e3b95 7// CAF mode (requires root v5-23-02 + aliroot v4-16-Rev08)
8// root[2] AnalysisTrainPWG4Jets("proof")
9// Local mode requires AliESds.root or AliAOD.root in ./data directory
10// root[3] AnalysisTrainPWG4Jets("local")
11// In proof and grid modes, a token is needed and sourcing the produced environment file.
12//
13// If 'saveTrain' flag is set, the train will generate a directory name and run
14// in this directory. A configuration file 'ConfigTrain.C' will be generated.
15// One can replay at any time the train via:
16// root[1] AnalysisTrainPWG4Jets(ana_mode, plugin_mode, "train_default_<date>/ConfigTrain.C")
17
18// For Usage with fastjet run in "offline" first and then "submit"
19// jdl and analysismacro are automatically patched after "offline" mode
20
21// =============================================================================
22// ### General Steering variables
23// =============================================================================
24//== general setup variables
25TString kTrainName = "testAnalysis"; // *CHANGE ME* (no blancs or special characters)
26TString kJobTag = "PWG4 Jet Tasks analysis train configured"; // *CHANGE ME*
27
28// Usage of par files ONLY in grid mode and ONLY if the code is not available
29// in the deployed AliRoot versions. Par file search path: local dir, if not there $ALICE_ROOT.
30// To refresh par files, remove the ones in the workdir, then do "make <target.par>" in
31// AliRoot.
32Bool_t kUsePAR = kFALSE; // use par files for extra libs
33Bool_t kUseCPAR = kFALSE; // use par files for common libs
34Bool_t kFillAOD = kFALSE; // switch of AOD filling for on the fly analysis
4721d8c5 35Int_t kSaveAOD = 8; // Bit switch 1 = Full AOD 2 = Jet AOD , 4 = PartCorr, 8 = JCORRAN
c38e3b95 36//== general input and output variables
9a5c5b1e 37
c38e3b95 38Int_t iAODanalysis = 1; // Analysis on input AOD's
39Int_t iAODhandler = 1; // Analysis produces an AOD or dAOD's
40Int_t iESDfilter = 0; // ESD to AOD filter (barrel + muon tracks)
e84da0a5 41Int_t iPhysicsSelection = 1; // ESD to AOD filter (barrel + muon tracks)
39e7e8ab 42UInt_t iPhysicsSelectionFlag = 0; // set by pyshics selection and passed to the task, kMB, kUserDefined etc
cfd02305 43Bool_t useTender = kFALSE; // use tender wagon
c38e3b95 44Bool_t kUseKinefilter = kFALSE; // use Kinematics filter
45Bool_t kUseMuonfilter = kFALSE; // use Kinematics filter
46TString kCommonOutputFileName = "PWG4_JetTasksOutput.root";
9748e967 47TString kCaloQAOutputFileName = "PWG4_CaloQAOutput.root";
c38e3b95 48
49
50//== general process variables
51
52// ### Other flags to steer the analysis
53//==============================================================================
9a5c5b1e 54Bool_t kSkipTerminate = kTRUE; // Do not call Teminate
c38e3b95 55Bool_t kUseDate = kFALSE; // use date in train name
56Bool_t kUseDebug = kTRUE; // activate debugging
46534866 57Int_t kErrorIgnoreLevel = -1; // takes the errror print level from .rootrc
58// From TError.h:
59// const Int_t kUnset = -1;
60// const Int_t kPrint = 0;
61// const Int_t kInfo = 1000;
62// const Int_t kWarning = 2000;
63// const Int_t kError = 3000;
64// const Int_t kBreak = 4000;
65// const Int_t kSysError = 5000;
66// const Int_t kFatal = 6000;
67Int_t kUseSysInfo = 0; // activate debugging
ebad39a9 68Long64_t kNumberOfEvents = 1234567890; // number of events to process from the chain
c38e3b95 69Bool_t kUseMC = kTRUE; // use MC info
70Bool_t kIsMC = kTRUE; // is MC info, if false it overwrites Use(AOD)MC
71Bool_t kUseAODMC = kTRUE; // use MC infA
72Bool_t kUseESDTags = kFALSE; // use ESD tags for selection
73Bool_t kUseTR = kFALSE; // use track references
74Bool_t kUseAODTags = kFALSE; // use AOD tags
75Bool_t kSaveTrain = kFALSE; // save train configuration as:
76
9a5c5b1e 77
c38e3b95 78// ### Analysis modules to be included. Some may not be yet fully implemented.
79//==============================================================================
80Int_t iJETAN = 1; // Jet analysis (PWG4) // 1 write standard 2 write non-standard jets, 3 wrtie both
81Int_t iDIJETAN = 1;
e6993a52 82Int_t iJETANLib = 1;
c38e3b95 83Int_t iPWG1QASym = 0; // Eva's QA task compiled on the fly...
84Int_t iPWG4JetTasks = 0; // all jet tasks flag for lib laoding
85Int_t iPWG4JetServices = 0; // jet spectrum analysis
86Int_t iPWG4JetSpectrum = 0; // jet spectrum analysis
58ef946c 87Int_t iPWG4JCORRAN = 0; // JCORRAN module
c38e3b95 88Int_t iPWG4UE = 0; // Underlying Event analysis
e0c120d9 89Int_t iPWG4LeadingUE = 0; // Underlying Event analysis
90Int_t iPWG4CorrectionsUE = 0; // Underlying Event analysis
c166d299 91Int_t iPWG4TmpSourceSara = 0; // Underlying Event analysis not in svn
aba42fcb 92Int_t iPWG4Fragmentation = 0; // Official Fragmentation
9f77f0ce 93Int_t iPWG4JetChem = 0; // Jet chemistry
c38e3b95 94Int_t iPWG4PtQAMC = 0; // Marta's QA tasks
95Int_t iPWG4PtSpectra = 0; // Marta's QA tasks
96Int_t iPWG4PtQATPC = 0; // Marta's QA tasks
4721d8c5 97Int_t iPWG4Cosmics = 0; // Marta's Cosmics Taks
c38e3b95 98Int_t iPWG4ThreeJets = 0; // Sona's thrust task
cc636095 99Int_t iPWG4QGSep = 0; // Sona's QG Separation task
100Int_t iPWG4Minijet = 0; // Eva's Mini Jet Task cluster task
b53f2e4f 101Int_t iPWG4KMeans = 0; // Andreas' KMeans task
d2e6cdd5 102Int_t iPWG4Cluster = 0; // CKB cluster task
4721d8c5 103Int_t iEMCUtilLibs = 0; // Flag to satisfy dependence on EMC utils
911a740f 104Int_t iPWG4PartCorrLibs = 0; // Gustavo's part corr analysis
c38e3b95 105Int_t iPWG4PartCorr = 0; // Gustavo's part corr analysis
d2e6cdd5 106Int_t iPWG4CaloQA = 0; // Gustavo's part corr analysis
107Int_t iPWG4JetCorr = 0; // Paul's jet corr analysis
911a740f 108Int_t iPWG4Tagged = 0; // Gustavo's part corr analysis
121e4bd5 109Int_t iPWG4omega3pi = 0; // Omega to 3 pi analysis (PWG4)
17d96675 110Int_t iPWG4GammaConvLib = 0; // Gamma Conversio
53c63663 111Int_t iPWG4GammaConv = 0; // Gamma Conversio
17d96675 112Int_t iPWG4CaloConv = 0; // Gamma Conversio
22e3ae6c 113Int_t kHighPtFilterMask = 32; // change depending on the used AOD Filter
e6993a52 114TString kDeltaAODJetName = "AliAOD.Jets.root";
4721d8c5 115TString kDeltaAODJCORRANName = "AliAOD.JCORRAN.root";
53c63663 116TString kDeltaAODPartCorrName = "deltaAODPartCorr.root";
c38e3b95 117
118
119//==============================================================================
120// ### PROOF Steering varibales
121//==============================================================================
122//== proof setup variables
123TString kProofCluster = "alicecaf.cern.ch";
124Bool_t kProofUseAFPAR = kFALSE; // use AF special par file
125TString kProofAFversion = "AF-v4-17";
126//== proof input and output variables
127TString kProofDataSet = "/COMMON/COMMON/LHC09a4_run8100X#/esdTree";
128Bool_t kProofSaveToAlien = kFALSE; // save proof outputs in AliEn train_[trainName]_ddMonthyyyy_time.C
129TString kProofOutdir = "";
130Bool_t kProofClearPackages = kFALSE;
131Int_t kProofEvents = 10000;
132Int_t kProofOffset = 0;
133//== proof process variables
134
135
136//==============================================================================
137// ### Grid plugin Steering varibiables
138//==============================================================================
139//== grid plugin setup variables
140Bool_t kPluginUse = kTRUE; // do not change
141Bool_t kPluginUseProductionMode = kFALSE; // use the plugin in production mode
39e7e8ab 142TString kPluginRootVersion = "v5-27-06b"; // *CHANGE ME IF MORE RECENT IN GRID*
d3af0232 143TString kPluginAliRootVersion = "v4-19-15-AN"; // *CHANGE ME IF MORE RECENT IN GRID*
9a5c5b1e 144Bool_t kPluginMergeViaJDL = kTRUE; // merge via JDL
145Bool_t kPluginFastReadOption = kFALSE; // use xrootd tweaks
146Bool_t kPluginOverwriteMode = kTRUE; // overwrite existing collections
dc6a7461 147Int_t kPluginOutputToRunNumber = 1; // write the output to subdirs named after run number
c38e3b95 148// TString kPluginExecutableCommand = "root -b -q";
149TString kPluginExecutableCommand = "source /Users/kleinb/setup_32bit_aliroot_trunk_clean_root_trunk.sh; alienroot -b -q ";
9a5c5b1e 150
c38e3b95 151// == grid plugin input and output variables
152TString kGridDatadir = "/alice/sim/PDC_08b/LHC09a1/AOD/";
9748e967 153Int_t kGridMaxRunsFromList = 999999999;
4d16db9c 154Int_t kGridOffsetRunFromList = 0; // skip the first n runs from the list
c38e3b95 155TString kGridLocalRunList = "";
156TString kGridOutdir = ""; // AliEn output directory. If blank will become output_<kTrainName>
3878a941 157TString kGridDataSet = ""; // sub working directory not to confuse different run xmls
9748e967 158Int_t kGridRunRange[2] = {0, -1}; // Set the run range
c38e3b95 159TString kGridRunPattern = "%03d"; // important for leading zeroes!!
160TString kGridPassPattern = "";
161TString kGridExtraFiles = ""; // files that will be added to the input list in the JDL...
9748e967 162Int_t kGridMaxMergeFiles = 12; // Number of files merged in a chunk grid run range
c38e3b95 163TString kGridMergeExclude = "AliAOD.root"; // Files that should not be merged
6408fe42 164TString kGridOutputStorages = "disk=2"; // Make replicas on the storages
c38e3b95 165// == grid process variables
c28abe00 166Int_t kGridRunsPerMaster = 100; // Number of runs per master job
e84da0a5 167Int_t kGridFilesPerJob = 100; // Maximum number of files per job (gives size of AOD)
c38e3b95 168
169//==============================================================================
170// ### Local Steering variables
171//==============================================================================
172//== local setup variables
173//== local input and output variables
174TString kLocalXMLDataset = ""; // Change local xml dataset for local interactive analysis
175TString kLocalDataList = "local_deltaaod.txt"; // Change local xml dataset for local interactive analysis
176// == local process variables
177
8ecf60e0 178TString kPluginMode;
c38e3b95 179
180
181// Temporaries.
182TString anaPars = "";
183TString anaLibs = "";
e84da0a5 184TString anaLibsExtra = "";
c38e3b95 185TString anaSources = "";
186// Function signatures
187class AliAnalysisAlien;
188
189//______________________________________________________________________________
190void AnalysisTrainPWG4Jets(const char *analysis_mode="local",
191 const char *plugin_mode="",
4d16db9c 192 const char *config_file="",Int_t iOffset = 0,Int_t iTotal = 0)
c38e3b95 193{
194// Main analysis train macro. If a configuration file is provided, all parameters
195// are taken from there but may be altered by CheckModuleFlags.
3878a941 196
8ecf60e0 197 // these flag may be needed by the config file
198 kPluginMode = plugin_mode;
199
200 if (strlen(config_file) && !LoadConfig(config_file)) return;
4d16db9c 201 if(iTotal>0)kGridMaxRunsFromList = iTotal; // overwrites the settings from config file
202 if(iOffset)kGridOffsetRunFromList = iOffset;
203 if(iOffset)kProofOffset = iOffset;
204
3878a941 205
c38e3b95 206 TString smode(analysis_mode);
207 smode.ToUpper();
208 if (kSaveTrain)WriteConfig();
8ecf60e0 209 // Check compatibility of selected modules
c38e3b95 210 CheckModuleFlags(smode);
ebad39a9 211 // gROOT->ProcessLine(".trace");
c38e3b95 212
213 printf("==================================================================\n");
214 printf("=========== RUNNING ANALYSIS TRAIN %s IN %s MODE ==========\n", kTrainName.Data(),smode.Data());
215 printf("==================================================================\n");
9748e967 216 printf("= Configuring analysis train for: =\n");
c38e3b95 217 if (iAODanalysis) printf("= AOD analysis =\n");
9748e967 218 else printf("= ESD analysis =\n");
219 if (iPhysicsSelection) printf("= Physics selection =\n");
cfd02305 220 if (useTender) printf("= Using tender =\n");
c38e3b95 221 if (iESDfilter) printf("= ESD filter =\n");
222 if (iJETAN) printf("= Jet analysis =\n");
223 printf("==================================================================\n");
9748e967 224
225 char *printMask = ":: %20s %10d\n";
226 printf(printMask,"Fill AOD",(UInt_t)kFillAOD);
227 printf(printMask,"Save AOD", (UInt_t)kSaveAOD);
228 printf(printMask,"MC truth", (UInt_t)kUseMC);
229 printf(printMask,"KINE filter", (UInt_t)kUseKinefilter);
230 printf(printMask,"track refs", (UInt_t)kUseTR);
231 printf(printMask,"tags", (UInt_t)kUseESDTags);
232 printf(printMask,"AOD tags", (UInt_t)kUseAODTags);
233 printf(printMask,"debugging", (UInt_t)kUseDebug);
234 printf(printMask,"PAR files", (UInt_t)kUsePAR);
235 printf(printMask,"AliEn plugin", (UInt_t)kPluginUse);
236 printf(printMask,"PWG1 QA sym", iPWG1QASym);
237 printf(printMask,"PWG4 Source Sara",iPWG4TmpSourceSara);
aba42fcb 238 printf(printMask,"PWG4 Fragmentation",iPWG4Fragmentation);
9748e967 239 printf(printMask,"PWG4 Jet Chem",iPWG4JetChem);
240 printf(printMask,"PWG4 Jet tasks",iPWG4JetTasks);
241 printf(printMask,"PWG4 Jet Services",iPWG4JetServices);
242 printf(printMask,"PWG4 Jet Spectrum",iPWG4JetSpectrum);
243 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
244 printf(printMask,"PWG4 UE",iPWG4UE);
e0c120d9 245 printf(printMask,"PWG4 Leading UE",iPWG4LeadingUE);
9748e967 246 printf(printMask,"PWG4 Corrections UE",iPWG4CorrectionsUE);
247 printf(printMask,"PWG4 Pt QA MC",iPWG4PtQAMC);
248 printf(printMask,"PWG4 Pt Spectra",iPWG4PtSpectra);
249 printf(printMask,"PWG4 Pt QA TPC",iPWG4PtQATPC);
250 printf(printMask,"PWG4 Cosmics",iPWG4Cosmics);
251 printf(printMask,"PWG4 Three Jets",iPWG4ThreeJets);
cc636095 252 printf(printMask,"PWG4 QGSep",iPWG4QGSep);
253 printf(printMask,"PWG4 Minijet",iPWG4Minijet);
9748e967 254 printf(printMask,"PWG4 KMeans",iPWG4KMeans);
255 printf(printMask,"PWG4 Cluster",iPWG4Cluster);
256 printf(printMask,"PWG4 Part Corr",iPWG4PartCorr);
257 printf(printMask,"PWG4 Calo QA",iPWG4CaloQA);
258 printf(printMask,"PWG4 Jet Corr",iPWG4JetCorr);
259 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
260 printf(printMask,"PWG4 Tagged",iPWG4Tagged);
261 printf(printMask,"PWG4 omega to 3 pi ",iPWG4omega3pi);
262 printf(printMask,"PWG4 Gamma Conv",iPWG4GammaConv);
17d96675 263 printf(printMask,"PWG4 Calo Conv",iPWG4CaloConv);
9748e967 264 printf(printMask,"HighPt FilterMask",kHighPtFilterMask);
3878a941 265
c38e3b95 266 //==========================================================================
267 // Connect to back-end system
268 if (!Connect(smode)) {
269 ::Error("AnalysisTrain", "Could not connect to %s back-end", analysis_mode);
270 return;
271 }
272
273 // Load common libraries and set include path
274 if (!LoadCommonLibraries(smode)) {
275 ::Error("AnalysisTrain", "Could not load common libraries");
276 return;
277 }
3878a941 278
279
c38e3b95 280
281 // Make the analysis manager and connect event handlers
e84da0a5 282 AliAnalysisManager *mgr = new AliAnalysisManager("PWG4Train", "pwg4 mini train");
c38e3b95 283 if (kCommonOutputFileName.Length()>0)mgr->SetCommonFileName(kCommonOutputFileName.Data());
284 if (kProofSaveToAlien) mgr->SetSpecialOutputLocation(kProofOutdir);
4a6f59cb 285 mgr->SetNSysInfo(0);
c38e3b95 286 if (!strcmp(plugin_mode, "test")) mgr->SetNSysInfo(1);
53c63663 287 if (kUseSysInfo)mgr->SetNSysInfo(kUseSysInfo);
9a5c5b1e 288 mgr->SetSkipTerminate(kSkipTerminate);
4a6f59cb 289
c38e3b95 290 // Load analysis specific libraries
291 if (!LoadAnalysisLibraries(smode)) {
292 ::Error("AnalysisTrain", "Could not load analysis libraries");
293 return;
294 }
295
296 // Create input handler (input container created automatically)
297 if (iAODanalysis) {
298 // AOD input handler
299 AliAODInputHandler *aodH = new AliAODInputHandler();
300 mgr->SetInputEventHandler(aodH);
e6993a52 301 if (iPWG4JetTasks) aodH->AddFriend(Form("deltas/%s",kDeltaAODJetName.Data()));
302 if (iPWG4PartCorr) aodH->AddFriend(Form("deltas/%s"kDeltaAODJetName.Data()));
c38e3b95 303 } else {
304 // ESD input handler
305 AliESDInputHandler *esdHandler = new AliESDInputHandler();
306 if (kUseESDTags) esdHandler->SetReadTags();
c166d299 307 esdHandler->SetReadFriends(kFALSE);
c38e3b95 308 mgr->SetInputEventHandler(esdHandler);
4a6f59cb 309 // if(iPWG4PtQATPC&& !kTrainName.Contains("pass5"))esdHandler->SetActiveBranches("ESDfriend");
c166d299 310
c38e3b95 311 }
f4d11ac8 312
c38e3b95 313 // Monte Carlo handler
314 if (kUseMC && !iAODanalysis) {
315 AliMCEventHandler* mcHandler = new AliMCEventHandler();
316 mgr->SetMCtruthEventHandler(mcHandler);
317 mcHandler->SetReadTR(kUseTR);
318 }
319 // AOD output container, created automatically when setting an AOD handler
320 if (iAODhandler) {
321 // AOD output handler
322 AliAODHandler* aodHandler = new AliAODHandler();
323 aodHandler->SetOutputFileName("AliAOD.root");
6408fe42 324 aodHandler->SetFillAODforRun(kFillAOD);
c38e3b95 325
326 mgr->SetOutputEventHandler(aodHandler);
121e4bd5 327 //
c38e3b95 328 if (iAODanalysis) {
329
330 // aodHandler->SetCreateNonStandardAOD();
331 // if (iJETAN)aodHandler->SetOutputFileName(kDeltaAODJetName.Data());
332 }
333 AliAnalysisDataContainer * cout_aod = mgr->GetCommonOutputContainer();
334 cout_aod->SetSpecialOutput();
335 }
336 // Debugging if needed
b03b08a3 337
3878a941 338 if (kUseDebug){
339 mgr->SetDebugLevel(3);
340 }
4721d8c5 341 if(kUseSysInfo>0){
342 mgr->RegisterExtraFile("syswatch.root");
343 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
344 kGridMergeExclude += "syswatch.root";
345 }
b03b08a3 346 else{
347 AliLog::SetGlobalLogLevel(AliLog::kError);
348 }
46534866 349
350
c38e3b95 351 //==========================================================================
352 // Create the chain. In this example it is created only from ALIEN files but
353 // can be done to work in batch or grid mode as well.
354 TChain *chain = CreateChain(smode, plugin_mode);
355
356 //==========================================================================
357 // Load the tasks configuration macros for all wagons. These files are supposed now to be
358 // in the current workdir, but in AliEn they will be in the file catalog,
359 // mapped from AliRoot and pecified in the jdl input list.
360
361 // For now connection to top input container and common AOD output container
362 // is done in this macro, but in future these containers will be connected
363 // from each task configuration macro.
cfd02305 364
365 //
366 // Tender and supplies. Needs to be called for every event.
367 //
368 if (useTender) {
369 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/TenderSupplies/AddTaskTender.C");
370 AliAnalysisTaskSE *tender = AddTaskTender(kTRUE);
371 // tender->SelectCollisionCandidates();
372 tender->SetDebugLevel(2);
373 }
374
375
376
e84da0a5 377 if(iPhysicsSelection && !iAODanalysis){
d2e6cdd5 378 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskPhysicsSelection.C");
39e7e8ab 379 Int_t iTriggerHIC = 0;
380 Bool_t rejectBkg = true;
381 if(kGridPassPattern.CompareTo("LHC10h")==0) {
382 iTriggerHIC = 2;
383 rejectBkg = false; // for the moment...
384 }
385 AliPhysicsSelectionTask* physSelTask = AddTaskPhysicsSelection(kIsMC,rejectBkg);
386 iPhysicsSelectionFlag = AliVEvent::kMB;
e84da0a5 387 }
388
c38e3b95 389 if (iESDfilter && !iAODanalysis) {
390 // ESD filter task configuration.
ebad39a9 391 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskESDFilterPWG4Train.C");
c38e3b95 392 AliAnalysisTaskESDfilter *taskesdfilter = AddTaskESDFilter(kUseKinefilter,kUseMuonfilter);
17d96675 393 taskesdfilter->SetEnableFillAOD(kFALSE);
4721d8c5 394 if(kIsMC){
395 mgr->RegisterExtraFile("pyxsec_hists.root");
396 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
397 kGridMergeExclude += "pyxsec_hists.root";
398
399 }
c38e3b95 400 }
401
402 // AOD tags
403 if (kUseAODTags) {
404 AliAnalysisTaskTagCreator* tagTask = new AliAnalysisTaskTagCreator("AOD Tag Creator");
405 mgr->AddTask(tagTask);
406 AliAnalysisDataContainer *coutTags = mgr->CreateContainer("cTag", TTree::Class(),
407 AliAnalysisManager::kOutputContainer, "AOD.tag.root");
408 mgr->ConnectInput (tagTask, 0, mgr->GetCommonInputContainer());
409 mgr->ConnectOutput(tagTask, 1, coutTags);
410 }
411
412 // Jet analysis
413 if (iJETAN) {
414 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJets.C");
415 AliAnalysisTaskJets *taskjets = 0;
416 if(iJETAN&1)taskjets = AddTaskJets(kHighPtFilterMask);
b53f2e4f 417 if(iJETAN&2){
418 UInt_t selection = 0;
17d96675 419 if(!kFillAOD){
420 selection = 0xffffff&~(1<<13)&~(1<<5)&~(1<<6); // switch OFF DA and all R = 0.7 to save processing time
421 selection &= ~(1<<1)&~(1<<2)&~(1<<4)&~(1<<6)&~(1<<8)&~(1<<10)&~(1<<12);
422 }
423 else {
424 selection = 0xffffff&~(1<<13)&~(1<<5)&~(1<<6); // switch OFF DA and all R = 0.7 to save processing time;
425 selection &= ~(1<<1)&~(1<<2)&~(1<<4)&~(1<<6)&~(1<<8)&~(1<<10)&~(1<<12);
426 }
b53f2e4f 427 AddTaskJetsDelta(kDeltaAODJetName.Data(),kHighPtFilterMask,kUseAODMC,selection);
e0c120d9 428 AddTaskJets("AOD","FASTKT",0.2,kHighPtFilterMask);
b53f2e4f 429 }
c38e3b95 430 if (!taskjets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
431 }
432
bd80a748 433 if(iPWG4Cluster){
434 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCluster.C");
435 AliAnalysisTaskJetCluster *taskCl = 0;
436 if(iPWG4Cluster&1){
39e7e8ab 437 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1); // this one is for the background random jets
438 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1); // this one is for the background jets
439 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1); // this one is for the background random jets
d4e8abc5 440
441 if(kUseAODMC){
39e7e8ab 442 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1); // this one is for the background jets
443 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1); // this one is for the background jets
444 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1); // this one is for the background random jets
445 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1); // this one is for the background random jets
d4e8abc5 446 }
8ecf60e0 447
bd80a748 448 if (!taskCl) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCluster cannot run for this train conditions - EXCLUDED");
449 }
450 if(iPWG4Cluster&2){
451 UInt_t selection = 0;
452 if(!iAODanalysis) selection = 0xffffff;
453 else selection = 1<<0|1<<1|1<<2|1<<3|1<<4|1<<5|1<<7|1<<8|1<<9;
454 selection&=~(1<<4); // exluded R = .04 already the dafault
d4e8abc5 455 selection&=~(1<<6); // exluded R = .04 already the dafault
39e7e8ab 456 AddTaskJetClusterDelta(kHighPtFilterMask,kUseAODMC,iPhysicsSelectionFlag,"KT",selection);
bd80a748 457 }
458 if(iPWG4Cluster&4){
459 UInt_t selection = 0;
460 if(!iAODanalysis){
461 selection = 0xffffff;
462 selection &= ~(1<<1)&~(1<<3)&~(1<<5)&~(1<<7)&~(1<<9);
463 }
464 else selection = 1<<0|1<<1|1<<2|1<<3|1<<4|1<<5|1<<7|1<<8|1<<9;
d4e8abc5 465 selection&=~(1<<4); // exluded R = .04 already the dafault
466 selection&=~(1<<6); // exluded R = .04 already the dafault
39e7e8ab 467 AddTaskJetClusterDelta(kHighPtFilterMask,kUseAODMC,iPhysicsSelectionFlag,"ANTIKT",selection);
8ecf60e0 468 // AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelection,"ANTIKT",0.4,0,1);
bd80a748 469
470 }
471 }
472
c38e3b95 473 if (iDIJETAN) {
474 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskDiJets.C");
475 AliAnalysisTaskDiJets *taskdijets = 0;
82ebd295 476 if(iDIJETAN&1)taskdijets = AddTaskDiJets();
c38e3b95 477 if (!taskdijets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
82ebd295 478 if(iDIJETAN&2){
479 taskdijets = AddTaskDiJets("jetsAOD_CDF07");
480 taskdijets = AddTaskDiJets("jetsAOD_DA07");
481 taskdijets = AddTaskDiJets("jetsAOD_FASTJET07");
482 taskdijets = AddTaskDiJets("jetsAOD_FASTKT07");
483 taskdijets = AddTaskDiJets("jetsAOD_SISCONE07");
484 taskdijets = AddTaskDiJets("jetsAOD_UA107");
485 }
c38e3b95 486 }
487
c38e3b95 488 if(iPWG1QASym){
5dbdc61f 489 gROOT->LoadMacro("$ALICE_ROOT/PWG1/PilotTrain/AddTaskQAsym.C");
c38e3b95 490 AliAnalysisTaskQASym *taskQASym = AddTaskQAsym(-1);
491 if (!taskQASym) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQASym cannot run for this train conditions - EXCLUDED");
121e4bd5 492 }
c38e3b95 493
121e4bd5 494
495
496 if(iPWG4TmpSourceSara){
497 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskEta.C");
498 AliAnalysisTaskEta *taskEta = AddTaskEta();
499 if (!taskEta) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskEta cannot run for this train conditions - EXCLUDED");
c38e3b95 500 }
501
aba42fcb 502 if(iPWG4Fragmentation){
503 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskFragmentationFunction.C");
8be7acf2 504 AliAnalysisTaskFragmentationFunction *taskFrag = 0;
505 if(kUseAODMC){
506 taskFrag = AddTaskFragmentationFunction(1<<1,kHighPtFilterMask);
507 taskFrag = AddTaskFragmentationFunction(1<<2,kHighPtFilterMask);
5fde4a38 508 // taskFrag = AddTaskFragmentationFunction(1<<3,kHighPtFilterMask);
cfd02305 509 taskFrag = AddTaskFragmentationFunction(1<<5,kHighPtFilterMask);
510 taskFrag = AddTaskFragmentationFunction(1<<11); // w/o acceptance cuts
c2658535 511 taskFrag = AddTaskFragmentationFunction(1<<12); // with acceptance cuts
512 // anti-kt
513 taskFrag = AddTaskFragmentationFunction(1<<21); // w/o acceptance cuts
514 taskFrag = AddTaskFragmentationFunction(1<<22); // with acceptance cuts
515
8be7acf2 516 }
517 else{
518 taskFrag = AddTaskFragmentationFunction(1<<0,kHighPtFilterMask);
c2658535 519 taskFrag = AddTaskFragmentationFunction(1<<10,kHighPtFilterMask);
520 taskFrag = AddTaskFragmentationFunction(1<<20,kHighPtFilterMask);
8be7acf2 521 }
522
aba42fcb 523 if (!taskFrag) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskFragmentationFunction cannot run for this train conditions - EXCLUDED");
c166d299 524 }
525
c580ebbb 526
9f77f0ce 527 if(iPWG4JetChem){
528 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetChem.C");
529 AliAnalysisTask *taskChem = AddTaskJetChem();
c580ebbb 530 if (!taskChem) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetChem cannot run for this train conditions - EXCLUDED");
531 }
532
533
c38e3b95 534 if(iPWG4JetServices){
535 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetServices.C");
536 AliAnalysisTaskJetServices *taskjetServ = 0;
537 taskjetServ = AddTaskJetServices();
538 if (!taskjetServ) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetServices cannot run for this train conditions - EXCLUDED");
53c63663 539 if(kGridRunRange[0]>0)taskjetServ->SetRunRange(kGridRunRange[0],kGridRunRange[1]);
27cdf9c4 540 else taskjetServ->SetRunRange(110000,160000);
541 taskjetServ->SetMCData(kIsMC);
dc6a7461 542 taskjetServ->SetUsePhysicsSelection((Bool_t)iPhysicsSelection);
39e7e8ab 543 taskjetServ->SetPhysicsSelectionFlag(iPhysicsSelectionFlag); //
9f77f0ce 544 taskjetServ->SetDebugLevel(0);
c38e3b95 545 }
546
c38e3b95 547 if(iPWG4JetSpectrum){
548 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetSpectrum2.C");
549 AliAnalysisTaskJetSpectrum2 *taskjetSpectrum = 0;
17d96675 550
6bd3fdae 551 if(iPWG4JetSpectrum&1){
552 UInt_t iSelection = 0xffff;
39e7e8ab 553 taskJetSpectrum = AddTaskJetSpectrum2Delta(kHighPtFilterMask,kUseAODMC,iPhysicsSelectionFlag,iSelection); // bug fixed 10.11.10
b53f2e4f 554 }
e6993a52 555 if(iPWG4JetSpectrum&2){
6bd3fdae 556 if(kIsMC){
557 UInt_t eventSelection = AliAnalysisHelperJetTasks::kIsPileUp|AliAnalysisHelperJetTasks::kVertexIn;
558 if(iPhysicsSelection)eventSelection |= AliAnalysisHelperJetTasks::kPhysicsSelection;
39e7e8ab 559 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC_FASTJET04","",kHighPtFilterMask,iPhysicsSelectionFlag,eventSelection);
560 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC2_FASTJET04","",kHighPtFilterMask,iPhysicsSelectionFlag,eventSelection);
6bd3fdae 561
562 eventSelection = AliAnalysisHelperJetTasks::kIsCosmic|AliAnalysisHelperJetTasks::kVertexIn;
563 if(iPhysicsSelection)eventSelection |= AliAnalysisHelperJetTasks::kPhysicsSelection;
39e7e8ab 564 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC_FASTJET04","",kHighPtFilterMask,iPhysicsSelectionFlag,eventSelection);
6bd3fdae 565
566 eventSelection = AliAnalysisHelperJetTasks::kNone;
39e7e8ab 567 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC2_FASTJET04","",kHighPtFilterMask,iPhysicsSelectionFlag,eventSelection);
568 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","jetsAODMC_FASTJET04","",kHighPtFilterMask,iPhysicsSelectionFlag,eventSelection);
17d96675 569 }
6bd3fdae 570 else{
571 UInt_t eventSelection = AliAnalysisHelperJetTasks::kIsPileUp|AliAnalysisHelperJetTasks::kVertexIn;
572 if(iPhysicsSelection)eventSelection |= AliAnalysisHelperJetTasks::kPhysicsSelection;
39e7e8ab 573 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","","",kHighPtFilterMask,iPhysicsSelectionFlag,eventSelection);
6bd3fdae 574 eventSelection = AliAnalysisHelperJetTasks::kIsCosmic|AliAnalysisHelperJetTasks::kVertexIn;
575 if(iPhysicsSelection)eventSelection |= AliAnalysisHelperJetTasks::kPhysicsSelection;
39e7e8ab 576 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","","",kHighPtFilterMask,iPhysicsSelectionFlag,eventSelection);
6bd3fdae 577 }
578 }
39e7e8ab 579 if(iPWG4JetSpectrum&4){
6bd3fdae 580 // jet backgrounds... just for testing...
39e7e8ab 581 taskjetSpectrum = AddTaskJetSpectrum2("jetsAOD_FASTJET04","","",kHighPtFilterMask,iPhysicsSelectionFlag,0,kTRUE,1);
e6993a52 582 }
6bd3fdae 583 if (!taskjetSpectrum) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetSpectrum2 cannot run for this train conditions - EXCLUDED");
584 // taskjetSpectrum->SetDebugLevel(1);
c38e3b95 585 }
6bd3fdae 586
587
58ef946c 588 if(iPWG4JCORRAN){
589 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJCORRANTask.C");
4721d8c5 590 AliJCORRANTask* corran = AddTaskJCORRAN(kDeltaAODJCORRANName.Data(),0);
58ef946c 591 if(!corran)::Warning("AnalysisTrainPWG4Jets", "AliJCORRANTask cannot run for this train conditions - EXCLUDED");
4721d8c5 592 else{
593 if(kDeltaAODJCORRANName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJCORRANName.Data());
594 }
58ef946c 595 }
596
c38e3b95 597 if(iPWG4UE){
598 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskUE.C");
599 AliAnalysisTaskUE *taskUE = 0;
600 if(iPWG4UE&1)taskUE = AddTaskUE();
601 if(iPWG4UE&2){
94ee88d4 602 taskUE =AddTaskUE("jetsAOD_CDF04","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
17d96675 603 // taskUE =AddTaskUE("jetsAOD_CDF07","CDF", "LJ", "TRANSV","MSP");
94ee88d4 604 taskUE =AddTaskUE("jetsAOD_SISCONE04","CDF", "LJ", "TRANSV","MSP");
17d96675 605 // taskUE =AddTaskUE("jetsAOD_SISCONE07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
94ee88d4 606 taskUE =AddTaskUE("jetsAOD_ICDF","CDF","LJ","TRANSV","MSP");
607 taskUE =AddTaskUE("jetsAOD_FASTKT04","CDF", "LJ", "TRANSV","MSP");
17d96675 608 // taskUE =AddTaskUE("jetsAOD_FASTKT07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
58ef946c 609 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta05", "TRANSV","MSP");
610 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta09", "TRANSV","MSP");
c38e3b95 611 }
2bb1f4ca 612
c38e3b95 613 if (!taskUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskUE cannot run for this train conditions - EXCLUDED");
614 }
e0c120d9 615
616 if(iPWG4LeadingUE){
617 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskLeadingTrackUE.C");
618 AliAnalysisTaskLeadingTrackUE *taskLeadingUE = AddTaskLeadingTrackUE(kUseMC);
619 if (!taskLeadingUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTasLeadingTrackkUE cannot run for this train conditions - EXCLUDED");
27cdf9c4 620 // taskLeadingUE->SetFilterBit(64);
e0c120d9 621 }
622
623
9748e967 624 if(iPWG4CorrectionsUE){
625 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCorrectionsUE.C");
626 AliAnalysisTaskCorrectionsUE *taskCorrectionsUE = 0;
627 if(iPWG4CorrectionsUE&1)taskCorrectionsUE = AddTaskCorrectionsUE("jetsAOD_NONE","CDF","MP_eta05","TRANSV","MSP",kFALSE);
628 if (!taskCorrectionsUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCorrectionsUE cannot run for this train conditions - EXCLUDED");
629 }
c38e3b95 630
631 if(iPWG4ThreeJets){
632 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskThreeJets.C");
633 AliAnalysisTaskThreeJets *taskThree = AddTaskThreeJets();
634 if(!taskThree)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskThreets cannot run for this train conditions - EXCLUDED");
635 }
cc636095 636 if(iPWG4QGSep){
637 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskQGSep.C");
638 AliAnalysisTaskQGSep *taskQGSep = AddTaskQGSep(kUseMC,iAODanalysis);
639 if(!taskQGSep)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQGSep cannot run for this train conditions - EXCLUDED");
640 }
641
642
643 if(iPWG4Minijet){
644 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskMinijet.C");
4d16db9c 645 AliAnalysisTaskMinijet *taskMini = AddTaskMinijet(-1,"esd",kUseMC,kGridDataSet);
cc636095 646 // if we ha highmult trigger add another task
647 if(!taskMini)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskMinjet cannot run for this train conditions - EXCLUDED");
648 }
649
650
c38e3b95 651 if(iPWG4PtQAMC){
652 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQAMC.C");
f87effcf 653 AliPWG4HighPtQAMC *taskQAMC = 0;
654 if(kUseMC){
655 if(iPWG4PtQAMC&1)taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),0);
656 if(iPWG4PtQAMC&1)taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),1);
657 }
c38e3b95 658 if (!taskQAMC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQAMC cannot run for this train conditions - EXCLUDED");
659 }
660
661 if(iPWG4PtQATPC){
662 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQATPConly.C");
10295ac3 663 AliPWG4HighPtQATPConly *taskQATPC = 0;
b1cd0099 664 if(iPWG4PtQATPC&1)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),1);
665 if(iPWG4PtQATPC&2)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),2);
10295ac3 666
667 if (!taskQATPC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQATPC cannot run for this train conditions - EXCLUDED");
c38e3b95 668 }
3878a941 669
1f329128 670 if(iPWG4Cosmics){
671 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4CosmicCandidates.C");
672
673 AliPWG4CosmicCandidates *taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(0);
674 taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(1);
675
676 if (!taskPWG4CosmicCandidates) ::Warning("AnalysisTrainPWG4Jets", "AddTaskPWG4CosmicCandidates cannot run for this train conditions - EXCLUDED");
677 }
678
679
c38e3b95 680 if(iPWG4PtSpectra){
681 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtSpectra.C");
b1cd0099 682 AliPWG4HighPtSpectra *taskPtSpectra = AddTaskPWG4HighPtSpectra(kGridDataSet.Data());
c38e3b95 683 if (!taskPtSpectra) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskPtSpectra cannot run for this train conditions - EXCLUDED");
684 }
b53f2e4f 685 if(iPWG4KMeans){
686 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskKMeans.C");
687 AliAnalysisTaskKMeans *taskKMeans = AddTaskKMeans();
688 if (!taskKMeans) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskKMenans cannot run for this train conditions - EXCLUDED");
689 }
690
c38e3b95 691 if(iPWG4PartCorr){
692 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPartCorr.C");
14526afb 693 AliAnalysisTaskParticleCorrelation *taskpartcorrPHOS = AddTaskPartCorr("AOD", "PHOS",kFALSE,kIsMC);
c38e3b95 694 if (!taskpartcorrPHOS) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation PHOS cannot run for this train conditions - EXCLUDED");
14526afb 695 AliAnalysisTaskParticleCorrelation *taskpartcorrEMCAL = AddTaskPartCorr("AOD", "EMCAL",kFALSE,kIsMC);
c38e3b95 696 if (!taskpartcorrEMCAL) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation EMCAL cannot run for this train conditions - EXCLUDED");
4721d8c5 697 if(kDeltaAODPartCorrName.Length()>0)mgr->RegisterExtraFile(kDeltaAODPartCorrName.Data());
121e4bd5 698 }
699
d2e6cdd5 700 if(iPWG4CaloQA){
701 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/QA/AddTaskCalorimeterQA.C");
9748e967 702 AliAnalysisTaskParticleCorrelation *taskcaloQA = AddTaskCalorimeterQA("ESD",kFALSE,kIsMC,kCaloQAOutputFileName.Data());
d2e6cdd5 703 if(!taskcaloQA)::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation QA cannot run - EXCLUDED");
aba42fcb 704 // if(kCaloQAOutputFileName.Length()>0)mgr->RegisterExtraFile(kCaloQAOutputFileName.Data());
d2e6cdd5 705 }
706
d2e6cdd5 707 if(iPWG4JetCorr){
708 // using namespace JetCorrelHD;
d3af0232 709 TString cdir = gSystem->WorkingDirectory();
710 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
d2e6cdd5 711 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCorrel.C");
712 AliAnalysisTaskJetCorrel *taskjetcorr = AddTaskJetCorrel();
d3af0232 713 gSystem->ChangeDirectory(cdir);
c166d299 714 if (!taskjetcorr) ::Warning("AnalysisTrainNew", "AliAnalysisTaskJetCorrel cannot run for this train conditions - EXCLUDED");
d2e6cdd5 715 }
716
911a740f 717 if(iPWG4Tagged){
718 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskTaggedPhotons.C");
719 AliAnalysisTaskTaggedPhotons * taskTagged = AddTaskTaggedPhotons(kFALSE); // EMCAL
58ef946c 720 taskTagged = AddTaskTaggedPhotons(kTRUE); // PHOS
911a740f 721 if (!taskTagged) ::Warning("AnalysisTrainNew", "AliAnalysisTaskTaggedPhotons cannot run for this train conditions - EXCLUDED");
722 }
121e4bd5 723 if (iPWG4omega3pi) {
724 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskomega3pi.C");
725 AliAnalysisTaskOmegaPi0PiPi *taskomega3pi = AddTaskomega3pi();
726 if (!taskomega3pi) ::Warning("AnalysisTrainNew", "AliAnalysisTaskomega3pi cannot run\
727 for these train conditions - EXCLUDED");
728 }
729
53c63663 730 // PWG4 gamma conversion analysis
731 if (iPWG4GammaConv) {
732 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskGammaConversion.C");
733 TString cdir = gSystem->WorkingDirectory();
734 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
735 // TString gcArguments = "-run-on-train -run-jet -run-chic -run-neutralmeson -run-cf";
58ef946c 736 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
737 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
b0a36f28 738 TString gcArguments = "-run-on-train -run-jet -run-omega-meson -use-own-xyz -run-neutralmeson -no-aod";
27cdf9c4 739 // TString kGCAnalysisCutSelectionId="9003562000100310";
cfd02305 740 // TString kGCAnalysisCutSelectionId="9003562000100312";
741 // gcArguments.Append(Form(" -set-cut-selection %s ",kGCAnalysisCutSelectionId.Data()));
53c63663 742 if(!kIsMC)gcArguments += " -mc-off";
743 AliAnalysisTaskGammaConversion * taskGammaConversion = AddTaskGammaConversion(gcArguments,mgr->GetCommonInputContainer());
744 gSystem->ChangeDirectory(cdir);
121e4bd5 745 taskGammaConversion->SelectCollisionCandidates();
53c63663 746 if (!taskGammaConversion) ::Warning("AnalysisTrainNew", "AliAnalysisTaskGammaConversion cannot run for these train conditions - EXCLUDED");
747 }
748
17d96675 749 if (iPWG4CaloConv) {
750 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCaloConv.C");
751 AliAnalysisTaskCaloConv * taskCaloConv = AddTaskCaloConv();
752 if (!taskCaloConv) ::Warning("AnalysisTrainNew", "AliAnalysisTaskCaloConv cannot run for these train conditions - EXCLUDED");
753 }
754
755
3878a941 756
c38e3b95 757 //==========================================================================
758 // FOR THE REST OF THE TASKS THE MACRO AddTaskXXX() is not yet implemented/
759 // Run the analysis
760 //
761 if (kPluginUse) {
762 AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
763 AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
764 }
765
766 if (mgr->InitAnalysis()) {
767 mgr->PrintStatus();
768 // if (kSaveTrain || strlen(config_file)) gSystem->ChangeDirectory(kTrainName);
e84da0a5 769 if (!strcmp(plugin_mode,"submit")&&smode=="GRID"){
c38e3b95 770 TString alien_workdir = gGrid->GetHomeDirectory();
771 if (iAODanalysis) alien_workdir += "analysisAOD";
772 else alien_workdir += "analysisESD";
3878a941 773 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
c38e3b95 774 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
e84da0a5 775 printf("=== AnalysisTrainPWG4Jets:: Registering jdl in the work directory alien://%s/%s, should be done by the manager! ===\n",
c38e3b95 776 alien_workdir.Data(),gridhandler->GetGridOutputDir());
58ef946c 777
778 TString dest;
779 dest = Form("%s/%s/%s.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
780 if(AliAnalysisAlien::FileExists(dest.Data())){
781 // Printf("%s exist on grid removing...",dest.Data());
782 // gGrid->Rm(dest.Data());
783 }
784 TFile::Cp(Form("file:%s.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
4721d8c5 785
786
787 TString dest;
788 dest = Form("%s/%s/%s_merge.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
789 if(AliAnalysisAlien::FileExists(dest.Data())){
790 // Printf("%s exist on grid removing...",dest.Data());
791 // gGrid->Rm(dest.Data());
792 }
793 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
794
58ef946c 795
73b7619a 796 dest = Form("%s/rootfiles/STEER/LQ1dRef_v1.root",gGrid->GetHomeDirectory());
58ef946c 797 if(AliAnalysisAlien::FileExists(dest.Data())){
798 Printf("%s exist on grid removing...",dest.Data());
799 gGrid->Rm(dest.Data());
800 }
801 TFile::Cp(Form("file:%s/STEER/LQ1dRef_v1.root",
9748e967 802 gSystem->ExpandPathName("$ALICE_ROOT")),Form("alien://%s",dest.Data()));
c38e3b95 803 }
3878a941 804 AliLog::SetGlobalLogLevel(AliLog::kError);
c166d299 805 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
806 TFile * fM = TFile::Open("manager_local.root","RECREATE");
807 mgr->Write();
808 fM->Close();
809 }
46534866 810
811 // grmpf, aliroot error handler overwrites root
812 gErrorIgnoreLevel = kErrorIgnoreLevel;
813 if(gErrorIgnoreLevel>3000) AliLog::SetGlobalLogLevel(AliLog::kFatal);
c38e3b95 814 StartAnalysis(smode, chain);
4a6f59cb 815 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
816 for(int i = 0;i < mgr->GetTopTasks()->GetEntries();i++){
817 mgr->ProfileTask(i);
818 }
819 }
c38e3b95 820 if (!strcmp(plugin_mode, "offline")&&smode=="GRID"){
e84da0a5 821 // Offline mode path files
822 // PatchJDL();
823 PatchAnalysisMacro();
824 }
c38e3b95 825
e84da0a5 826 if (kSaveTrain && smode=="GRID") {
827 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
828 TString alien_workdir = gGrid->GetHomeDirectory();
829 if (iAODanalysis) alien_workdir += "analysisAOD";
3878a941 830 else alien_workdir += "analysisESD";
831 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
e84da0a5 832 // kGridOutdir = gridhandler->GetGridOutputDir();
833 printf("=== Registering ConfigTrain.C in the work directory <%s> ===\n",
c38e3b95 834 alien_workdir.Data());
e84da0a5 835 if (AliAnalysisAlien::FileExists(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data())))
836 gGrid->Rm(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
837 if (strcmp(plugin_mode, "test"))
838 TFile::Cp(Form("file:%sConfig.C",kTrainName.Data()), Form("alien://%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
839 }
840 }
c38e3b95 841}
842
843//______________________________________________________________________________
844void StartAnalysis(const char *mode, TChain *chain) {
845// Start analysis.
846 Int_t imode = -1;
847 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
848 if (!strcmp(mode, "LOCAL")) imode = 0;
849 if (!strcmp(mode, "PROOF")) imode = 1;
850 if (!strcmp(mode, "GRID")) imode = 2;
851 switch (imode) {
852 case 0:
853 if (!chain) {
854 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
855 return;
856 }
82ebd295 857 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
c38e3b95 858 return;
859 case 1:
860 if (!kProofDataSet.Length()) {
861 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "kProofDataSet is empty");
862 return;
863 }
864 mgr->StartAnalysis(mode, kProofDataSet, kProofEvents,kProofOffset);
865 return;
866 case 2:
867 if (kPluginUse) {
868 if (!mgr->GetGridHandler()) {
869 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Grid plugin not initialized");
870 return;
871 }
ebad39a9 872 mgr->StartAnalysis("grid",chain,kNumberOfEvents);
c38e3b95 873 } else {
874 if (!chain) {
875 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
876 return;
877 }
878 mgr->StartAnalysis(mode, chain);
ebad39a9 879 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
c38e3b95 880 }
881 return;
882 }
883}
884
885//______________________________________________________________________________
886void CheckModuleFlags(const char *mode) {
887// Checks selected modules and insure compatibility
888 Int_t imode = -1;
889 if (!strcmp(mode, "LOCAL")) imode = 0;
890 if (!strcmp(mode, "PROOF")) imode = 1;
891 if (!strcmp(mode, "GRID")) imode = 2;
892
893
e84da0a5 894 if (kUseCPAR) {
895 kPluginAliRootVersion = ""; // NO aliroot if we use CPAR
896 }
c38e3b95 897
898 if (imode==1) {
899 if (!kUsePAR) {
900 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PAR files enabled due to PROOF analysis");
901 kUsePAR = kTRUE;
902 }
903 }
904 if (imode != 2) {
905 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AliEn plugin disabled since not in GRID mode");
906 kPluginUse = kFALSE;
907 }
908
909
910 if(!kIsMC){
911 // switch off anthin related to MC
912 kUseMC = 0;
913 kUseAODMC = 0;
914 kUseTR = kFALSE;
915 }
916
917 if (iAODanalysis) {
918 // AOD analysis
919 if (kUseMC)
920 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "MC usage disabled in analysis on AOD's");
921 if (kUseAODTags)
922 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AOD tags usage disabled in analysis on AOD's");
923 kUseMC = kFALSE;
924 kUseTR = kFALSE;
925 kUseAODTags = kFALSE;
926 if (iESDfilter)
927 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "ESD filter disabled in analysis on AOD's");
928 iESDfilter = 0;
e84da0a5 929 if (iPhysicsSelection)
930 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "Physics Selection disabled in analysis on AOD's");
931 iPhysicsSelection = 0;
c38e3b95 932 if (!iAODhandler) {
933 if (iJETAN)
934 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "JETAN disabled in analysis on AOD's without AOD handler");
935 iJETAN = 0;
936 iDIJETAN = 0;
937 }
938 // Disable tasks that do not work yet on AOD data
58ef946c 939 if(iPWG4JCORRAN)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 JCORRAN disabled in analysis on AOD's");
4d62ae1a 940 iPWG4JCORRAN = 0;
c38e3b95 941 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
942 iPWG4PtQAMC = 0;
943 if( iPWG4PtQATPC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtTPC disabled in analysis on AOD's");
944 iPWG4PtQATPC = 0;
1f329128 945 if( iPWG4Cosmics)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Comics disabled in analysis on AOD's");
946 iPWG4Cosmics = 0;
947
c38e3b95 948 if( iPWG4PtSpectra)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
949 iPWG4PtSpectra = 0;
b53f2e4f 950 if(iPWG4KMeans)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4KMeans disabled on AOD's");
951 iPWG4KMeans = 0;
d2e6cdd5 952 if (iPWG4JetCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4Jetcorr disabled on AOD's");
953 iPWG4JetCorr = 0;
c38e3b95 954 if (iPWG4PartCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4partcorr disabled on AOD's");
955 iPWG4PartCorr = 0;
d2e6cdd5 956 if (iPWG4CaloQA)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4CaloQA disabled on AOD's");
957 iPWG4CaloQA = 0;
911a740f 958 if (iPWG4Tagged)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4tagged disabled on AOD's");
959 iPWG4Tagged = 0;
121e4bd5 960 if (iPWG4omega3pi)
961 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG4omega3pi disabled on AOD's");
962 iPWG4omega3pi = 0;
c38e3b95 963 if(iPWG1QASym)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG1 QA Sym disabled in analysis on AOD's");
53c63663 964 if (iPWG4GammaConv)::Info("AnalysisPWG4Jets.C::CheckModuleFlags", "PWG4gammaconv disabled on AOD's");
965 iPWG4GammaConv = 0;
c38e3b95 966 iPWG1QASym = 0;
967 } else {
968 // ESD analysis
969 if (!kUseMC){
970 kUseTR = kFALSE;
971
972 if(kUseKinefilter)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Kine Filter disabled in analysis without MC");
973 kUseKinefilter = kFALSE;
974 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis without MC");
975 iPWG4PtQAMC = 0;
9748e967 976 if( iPWG4CorrectionsUE)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 CorrectionsUE disabled in analysis without MC");
977 iPWG4CorrectionsUE = 0;
c38e3b95 978 }
979 if (!kUseTR) {
c166d299 980 if(iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "iPWG4QATPCMC disabled if not reading track references");
b03b08a3 981 iPWG4PtQAMC = 0;
c38e3b95 982 }
e84da0a5 983 if (iJETAN){
984 iESDfilter=1;
985 }
c38e3b95 986 if (!iESDfilter){
987 kUseKinefilter = kFALSE;
988 kUseMuonfilter = kFALSE;
989 }
990 if(!iJETAN){
cc636095 991 iPWG4JetSpectrum = iPWG4UE = iPWG4CorrectionsUE = iPWG4ThreeJets = iPWG4QGSep = iDIJETAN = 0;
c38e3b95 992 }
993 }
cc636095 994 iPWG4JetTasks = iPWG4JetServices||iPWG4JetSpectrum||iPWG4UE||iPWG4LeadingUE||iPWG4PtQAMC||iPWG4PtSpectra||iPWG4PtQATPC||iPWG4Cosmics||iPWG4ThreeJets||iPWG4QGSep||iPWG4JetChem||iPWG4Minijet||iPWG4Fragmentation;
d2e6cdd5 995 iPWG4PartCorrLibs = iPWG4PartCorr||iPWG4Tagged||iPWG4CaloQA;
17d96675 996 iPWG4GammaConvLib = iPWG4GammaConv||iPWG4CaloConv;
997
998
999 iEMCUtilLibs = iPWG4PartCorrLibs||iPWG4JCORRAN||iPWG4GammaConvLib;
e6993a52 1000 iJETANLib = iPWG4JetTasks||iJETAN||iDIJETAN;
17d96675 1001
c38e3b95 1002 if (iESDfilter) {iAODhandler=1;}
1003 if (kUseKinefilter && !kUseMC) kUseKinefilter = kFALSE;
1004 if (kUseAODTags && !iAODhandler) kUseAODTags = kFALSE;
1005
1006
1007
1008}
1009
1010//______________________________________________________________________________
1011Bool_t Connect(const char *mode) {
1012// Connect <username> to the back-end system.
1013 Int_t imode = -1;
1014 if (!strcmp(mode, "LOCAL")) imode = 0;
1015 if (!strcmp(mode, "PROOF")) imode = 1;
1016 if (!strcmp(mode, "GRID")) imode = 2;
1017 TString username = gSystem->Getenv("alien_API_USER");
1018 switch (imode) {
1019 case 0:
1020 break;
1021 case 1:
1022 if (!username.Length()) {
1023 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1024 1. Have called: alien-token-init <username>\n \
1025 2. Have called: >source /tmp/gclient_env_$UID");
1026 return kFALSE;
1027 }
1028 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to PROOF cluster <%s>",
1029 username.Data(), kProofCluster.Data());
1030 gEnv->SetValue("XSec.GSI.DelegProxy", "2");
1031// TProof::Open(Form("%s@%s:31093", username.Data(), kProofCluster.Data()));
1032 TProof::Open(Form("%s@%s", username.Data(), kProofCluster.Data()));
1033 if (!gProof) {
1034 if (strcmp(gSystem->Getenv("XrdSecGSISRVNAMES"), "lxfsrd0506.cern.ch"))
1035 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Environment XrdSecGSISRVNAMES different from lxfsrd0506.cern.ch");
1036 return kFALSE;
1037 }
1038 if(kProofClearPackages)gProof->ClearPackages();
1039
1040 if(kProofSaveToAlien){
1041 TGrid::Connect("alien://");
1042 if (gGrid) {
1043 TString homedir = gGrid->GetHomeDirectory();
1044 TString workdir = homedir + kTrainName;
1045 if (!gGrid->Cd(workdir)) {
1046 gGrid->Cd(homedir);
1047 if (gGrid->Mkdir(workdir)) {
1048 gGrid->Cd(kTrainName);
1049 ::Info("AnalysisTrainPWG4Jets::Connect()", "Directory %s created", gGrid->Pwd());
1050 }
1051 }
1052 gGrid->Mkdir("proof_output");
1053 gGrid->Cd("proof_output");
1054 kProofOutdir = Form("alien://%s", gGrid->Pwd());
1055 }
1056 }
1057 break;
1058 case 2:
1059 if (!username.Length()) {
1060 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1061 1. Have called: alien-token-init <username>\n \
1062 2. Have called: >source /tmp/gclient_env_$UID");
1063 return kFALSE;
1064 }
1065 if (kPluginUse && !gSystem->Getenv("alien_CLOSE_SE")) {
1066 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode),
1067 "When using the AliEn plugin it is preferable to define the \
1068 variable alien_CLOSE_SE in your environment.");
1069 return kFALSE;
1070 }
1071 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to AliEn ...",
1072 username.Data());
1073 TGrid::Connect("alien://");
1074 if (!gGrid || !gGrid->IsConnected()) return kFALSE;
1075 break;
1076 default:
1077 ::Error("AnalysisTrainPWG4Jets.C::Connect", "Unknown run mode: %s", mode);
1078 return kFALSE;
1079 }
1080 ::Info("AnalysisTrainPWG4Jets.C::Connect","Connected in %s mode", mode);
1081 return kTRUE;
1082}
1083
1084//______________________________________________________________________________
1085Bool_t LoadCommonLibraries(const char *mode)
1086{
1087// Load common analysis libraries.
1088 Int_t imode = -1;
1089 if (!strcmp(mode, "LOCAL")) imode = 0;
1090 if (!strcmp(mode, "PROOF")) imode = 1;
1091 if (!strcmp(mode, "GRID")) imode = 2;
1092 if (!gSystem->Getenv("ALICE_ROOT")) {
ebad39a9 1093 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Analysis train requires that ALICE_ROOT is set to pick up Configurations");
c38e3b95 1094 return kFALSE;
1095 }
1096 Bool_t success = kTRUE;
1097 // ROOT libraries
1098 gSystem->Load("libTree.so");
1099 gSystem->Load("libGeom.so");
1100 gSystem->Load("libVMC.so");
1101 gSystem->Load("libPhysics.so");
1102
1103 // Load framework classes. Par option ignored here.
1104 switch (imode) {
1105 case 0:
1106 case 2:
1107 if (kUseCPAR) {
1108 success &= LoadLibrary("STEERBase", mode, kTRUE);
1109 success &= LoadLibrary("ESD", mode, kTRUE);
1110 success &= LoadLibrary("AOD", mode, kTRUE);
1111 success &= LoadLibrary("ANALYSIS", mode, kTRUE);
1112 success &= LoadLibrary("ANALYSISalice", mode, kTRUE);
1113 success &= LoadLibrary("CORRFW", mode, kTRUE);
1114 } else {
1115 success &= LoadLibrary("libSTEERBase.so", mode);
1116 success &= LoadLibrary("libESD.so", mode);
1117 success &= LoadLibrary("libAOD.so", mode);
1118 success &= LoadLibrary("libANALYSIS.so", mode);
1119 success &= LoadLibrary("libANALYSISalice.so", mode);
1120 success &= LoadLibrary("libCORRFW.so", mode);
1121 gROOT->ProcessLine(".include $ALICE_ROOT/include");
1122 }
1123 break;
1124 case 1:
1125 Int_t ires = -1;
1126 if (kProofUseAFPAR && !gSystem->AccessPathName(kProofAFversion)) ires = gProof->UploadPackage(kProofAFversion);
1127 if (ires < 0) {
1128 success &= LoadLibrary("STEERBase", mode);
1129 success &= LoadLibrary("ESD", mode);
1130 success &= LoadLibrary("AOD", mode);
1131 success &= LoadLibrary("ANALYSIS", mode);
1132 success &= LoadLibrary("ANALYSISalice", mode);
1133 success &= LoadLibrary("CORRFW", mode);
1134 } else {
1135 ires = gProof->EnablePackage(kProofAFversion);
1136 if (ires<0) success = kFALSE;
1137 success &= LoadLibrary("CORRFW", mode);
1138 }
1139 break;
1140 default:
1141 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Unknown run mode: %s", mode);
1142 return kFALSE;
1143 }
1144 if (success) {
1145 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: SUCCESS");
1146 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Include path for Aclic compilation:\n%s",
1147 gSystem->GetIncludePath());
1148 } else {
1149 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: FAILED");
1150 }
1151
1152 return success;
1153}
1154
1155//______________________________________________________________________________
1156Bool_t LoadAnalysisLibraries(const char *mode)
1157{
1158// Load common analysis libraries.
9748e967 1159 Bool_t success = kTRUE;
cfd02305 1160 if (useTender) {
1161 if (!LoadLibrary("TENDER", mode, kTRUE) ||
1162 !LoadLibrary("TENDERSupplies", mode, kTRUE)) return kFALSE;
1163 }
c38e3b95 1164 if (iESDfilter) {
b0a36f28 1165 /*
c38e3b95 1166 if (!LoadLibrary("PWG3base", mode, kTRUE) ||
1167 !LoadLibrary("PWG3muon", mode, kTRUE)) return kFALSE;
b0a36f28 1168 */
c38e3b95 1169 }
1170 // JETAN
e6993a52 1171 if (iJETANLib) {
b53f2e4f 1172 // this part needs some rework in case we do not need the fastjed finders for processing
1173 if (!LoadLibrary("JETAN", mode, kTRUE)) return kFALSE;
c38e3b95 1174 if (!strcmp(mode, "PROOF")){
ef1e462f 1175 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libCGAL.so\"\)", kTRUE);
c38e3b95 1176 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libfastjet.so\"\)", kTRUE);
1177 // problem when loading siscone copiled with different gcc version??
1178 // gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libsiscone.so\"\)", kTRUE);
1179 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libSISConePlugin.so\"\)", kTRUE);
1180 }
b53f2e4f 1181 if(!kUsePAR){
e84da0a5 1182 if (!LoadLibrary("CGAL", mode, kTRUE)) return kFALSE;
1183 if (!LoadLibrary("fastjet", mode, kTRUE)) return kFALSE;
1184 if (!LoadLibrary("siscone", mode, kTRUE)) return kFALSE;
1185 if (!LoadLibrary("SISConePlugin", mode, kTRUE)) return kFALSE;
1186 }
1187 else{
1188 // par files plus FASTJET needs some extra work... need to change
1189 // the loading sequence in the auto generated .C file
1190 if (!LoadLibrary("libCGAL.so", mode, kTRUE)) return kFALSE;
1191 if (!LoadLibrary("libfastjet.so", mode, kTRUE)) return kFALSE;
1192 if (!LoadLibrary("libsiscone.so", mode, kTRUE)) return kFALSE;
1193 if (!LoadLibrary("libSISConePlugin.so", mode, kTRUE)) return kFALSE;
1194 }
c38e3b95 1195 if (!LoadLibrary("FASTJETAN", mode, kTRUE)) return kFALSE;
1196 }
1197 if(iPWG4JetTasks){
c38e3b95 1198 if (!LoadLibrary("PWG4JetTasks", mode, kTRUE)) return kFALSE;
1199 }
58ef946c 1200
c38e3b95 1201 if(iPWG1QASym){
99bfd7f7 1202 if (!LoadSource(Form("%s/PWG1/AliAnalysisTaskQASym.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
c38e3b95 1203 }
121e4bd5 1204 if(iPWG4TmpSourceSara){
c166d299 1205 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
121e4bd5 1206 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskEta.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1207 }
58ef946c 1208
9f77f0ce 1209 /*
1210 if(iPWG4JetChem){
c580ebbb 1211 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
1212 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskJetChem.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1213 }
9f77f0ce 1214 */
c166d299 1215
4721d8c5 1216 if(iEMCUtilLibs){
1217 if (!LoadLibrary("EMCALUtils", mode, kTRUE) ||
1218 !LoadLibrary("PHOSUtils", mode, kTRUE)) return kFALSE;
1219 }
1220
911a740f 1221 if (iPWG4PartCorrLibs) {
4721d8c5 1222 if (!LoadLibrary("PWG4PartCorrBase", mode, kTRUE) ||
c38e3b95 1223 !LoadLibrary("PWG4PartCorrDep", mode, kTRUE)) return kFALSE;
1224 }
4721d8c5 1225 if(iPWG4JCORRAN){
1226 // PWG4 particle correlations
1227 if(!LoadLibrary("PWG4JCORRAN",mode,kTRUE))return kFALSE;
1228 }
d2e6cdd5 1229 if (iPWG4JetCorr) {
1230 if (!LoadLibrary("PWG4JetCorrel", mode, kTRUE)) return kFALSE;
1231 }
121e4bd5 1232 if (iPWG4omega3pi) {
1233 if (!LoadLibrary("PWG4omega3pi", mode, kTRUE)) return kFALSE;
1234 }
17d96675 1235 if (iPWG4GammaConvLib) {
53c63663 1236 if (!LoadLibrary("PWG4GammaConv", mode, kTRUE)) return kFALSE;
1237 }
c38e3b95 1238
1239 ::Info("AnalysisTrainPWG4Jets.C::LoadAnalysisLibraries", "Load other libraries: SUCCESS");
1240 return kTRUE;
1241}
1242
1243//______________________________________________________________________________
1244Bool_t LoadLibrary(const char *module, const char *mode, Bool_t rec=kFALSE)
1245{
1246// Load a module library in a given mode. Reports success.
1247 Int_t imode = -1;
1248 Int_t result;
1249 TString smodule(module);
1250 if (!strcmp(mode, "LOCAL")) imode = 0;
1251 if (!strcmp(mode, "PROOF")) imode = 1;
1252 if (!strcmp(mode, "GRID")) imode = 2;
1253 TString mod(module);
1254 if (!mod.Length()) {
1255 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Empty module name");
1256 return kFALSE;
1257 }
1258 // If a library is specified, just load it
1259 if (smodule.EndsWith(".so")) {
1260 mod.Remove(mod.Index(".so"));
1261 result = gSystem->Load(mod);
1262 if (result < 0) {
1263 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load library %s", module);
1264 return kFALSE;
1265 }
1266 if (rec) anaLibs += Form("%s.so ",mod.Data());
e84da0a5 1267 if (rec) anaLibsExtra += Form("%s.so ",mod.Data());
c38e3b95 1268 return kTRUE;
1269 }
1270 // Check if the library is already loaded
1271 if (strlen(gSystem->GetLibraries(Form("%s.so", module), "", kFALSE)) > 0)
1272 return kTRUE;
1273 switch (imode) {
1274 case 0:
1275 case 2:
1276 if (kUsePAR) {
1277 result = SetupPar(module);
1278 if (rec) anaPars += Form("%s.par ", module);
1279 } else {
1280 result = gSystem->Load(Form("lib%s.so", module));
1281 if (rec) anaLibs += Form("lib%s.so ", module);
1282 }
1283 break;
1284 case 1:
1285 if(!gSystem->AccessPathName(module)){
1286 ::Info("AnalysisTrainPWG4Jets.C::LoadLibrary", "Removing directory %s",module);
1287 gSystem->Exec(Form("rm -rf %s",module));
1288 }
1289 result = gProof->UploadPackage(module);
1290 if (result<0) {
1291 result = gProof->UploadPackage(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", module)));
1292 if (result<0) {
1293 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not find module %s.par in current directory nor in $ALICE_ROOT", module);
1294 return kFALSE;
1295 }
1296 }
1297 result = gProof->EnablePackage(module);
1298 break;
1299 default:
1300 return kFALSE;
1301 }
1302 if (result < 0) {
1303 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load module %s", module);
1304 return kFALSE;
1305 }
1306 return kTRUE;
1307}
1308
1309
1310
1311//______________________________________________________________________________
1312Bool_t LoadSource(const char *source, const char *mode, Bool_t rec=kFALSE)
1313{
1314// Load a module library in a given mode. Reports success.
1315 Int_t imode = -1;
1316 Int_t result = -1;
1317 if (!strcmp(mode, "LOCAL")) imode = 0;
1318 if (!strcmp(mode, "PROOF")) imode = 1;
1319 if (!strcmp(mode, "GRID")) imode = 2;
1320 TString ssource(source);
1321 TString basename = gSystem->BaseName(ssource.Data());
1322 if (!ssource.Length()) {
1323 ::Error("AnalysisTrainPWG4Jets.C::LoadSource", "Empty task name");
1324 return kFALSE;
1325 }
4d62ae1a 1326 // we have a source code so compile it
c38e3b95 1327 if (ssource.EndsWith(".cxx")) {
1328 // need to copy it here other wise the path is also used on grid...
1329 ssource.Remove(ssource.Index(".cxx"));
1330 basename.Remove(basename.Index(".cxx"));
1331 Printf("LoadSources:: Copying... path %s{cxx,h}",ssource.Data());
1332 gSystem->Exec(Form("cp %s.cxx . ",ssource.Data()));
1333 gSystem->Exec(Form("cp %s.h . ",ssource.Data()));
1334 // Path to code
1335 // only needed for local compilation, in grid and proof mode
1336 // the task headers are uploaded
1337 // path.Remove(path.Index(gSystem->BaseName(path.Data())));
1338 // Printf("LoadSources:: Including path %s",path.Data());
1339 // if(path.Length()>0)gROOT->ProcessLine(Form(".include %s",path.Data()));
1340 Printf("LoadSources:: Loading... path %s",basename.Data());
1341 switch (imode) {
1342 case 0:
b53f2e4f 1343 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1344 break;
1345 case 1:
b53f2e4f 1346 result = gProof->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1347 break;
1348 case 2:
b53f2e4f 1349 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1350 if (rec){
1351 // what we want to compile
1352 anaSources += Form("%s.cxx ",basename.Data());
1353 // what we need as input...
1354 anaLibs += Form("%s.cxx %s.h ",basename.Data(),basename.Data());
1355 }
1356 break;
1357 default:
1358 return kFALSE;
1359 }
1360 }
1361 if (result < 0) {
1362 ::Error("AnalysisTrainPWG4Jets.C::LoadSources", "Could not load source %s", source);
1363 return kFALSE;
1364 }
1365 return kTRUE;
1366}
1367
1368
1369//______________________________________________________________________________
1370TChain *CreateChain(const char *mode, const char *plugin_mode)
1371{
1372// Create the input chain
1373 Int_t imode = -1;
1374 if (!strcmp(mode, "LOCAL")) imode = 0;
1375 if (!strcmp(mode, "PROOF")) imode = 1;
1376 if (!strcmp(mode, "GRID")) imode = 2;
1377 TChain *chain = NULL;
1378 // Local chain
1379 switch (imode) {
1380 case 0:
1381 if (iAODanalysis) {
1382 if (!kLocalXMLDataset.Length()) {
1383 // Local AOD
1384 chain = new TChain("aodTree");
1385 TString line;
1386 ifstream in;
1387 in.open(kLocalDataList.Data());
1388 while (in.good()) {
1389 in >> line;
1390 if (line.Length() == 0) continue;
1391 // cout << " line = " << line << endl;
1392 chain->Add(line.Data());
1393 }
1394 } else {
1395 // Interactive AOD
1396 chain = CreateChainSingle(kLocalXMLDataset, "aodTree");
1397 }
1398 } else {
1399 if (!kLocalXMLDataset.Length()) {
1400 // Local ESD
1401 chain = new TChain("esdTree");
1402 TString line;
1403 ifstream in;
1404 in.open(kLocalDataList.Data());
1405 while (in.good()) {
1406 in >> line;
1407 if (line.Length() == 0) continue;
1408 cout << " line = " << line << endl;
1409 chain->Add(line.Data());
1410 }
1411 } else {
1412 // Interactive ESD
1413 chain = CreateChainSingle(kLocalXMLDataset, "esdTree");
1414 }
1415 }
1416 break;
1417 case 1:
1418 break;
1419 case 2:
1420 if (kPluginUse) {
1421// AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1422// AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1423 } else {
1424 TString treeName = "esdTree";
1425 if (iAODanalysis) treeName = "aodTree";
1426 chain = CreateChainSingle("wn.xml", treeName);
1427 }
1428 break;
1429 default:
1430 }
1431 if (chain && chain->GetNtrees()) return chain;
1432 return NULL;
1433}
1434
1435//______________________________________________________________________________
1436TChain* CreateChainSingle(const char* xmlfile, const char *treeName)
1437{
1438 printf("*******************************\n");
1439 printf("*** Getting the ESD Chain ***\n");
1440 printf("*******************************\n");
1441 TAlienCollection * myCollection = TAlienCollection::Open(xmlfile);
1442
1443 if (!myCollection) {
1444 ::Error("AnalysisTrainPWG4Jets.C::CreateChainSingle", "Cannot create an AliEn collection from %s", xmlfile) ;
1445 return NULL ;
1446 }
1447
1448 TChain* chain = new TChain(treeName);
1449 myCollection->Reset() ;
1450 while ( myCollection->Next() ) chain->Add(myCollection->GetTURL("")) ;
1451 chain->ls();
1452 return chain;
1453}
1454
1455//______________________________________________________________________________
1456Int_t SetupPar(char* pararchivename)
1457{
1458 if (!pararchivename || !strlen(pararchivename)) return -1;
1459 char processline[1024];
1460 if (gSystem->AccessPathName(Form("%s.par", pararchivename))) {
1461 if (!gSystem->AccessPathName(Form("%s/%s.par", gSystem->Getenv("ALICE_ROOT"),pararchivename))) {
1462 ::Info("AnalysisTrainPWG4Jets.C::SetupPar", "Getting %s.par from $ALICE_ROOT", pararchivename);
9748e967 1463 TFile::Cp(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", pararchivename)),
1464 Form("%s.par",pararchivename));
c38e3b95 1465 } else {
1466 ::Error("AnalysisTrainPWG4Jets.C::SetupPar", "Cannot find %s.par", pararchivename);
1467 return -1;
1468 }
1469 }
1470 if (kPluginUse && kSaveTrain) gSystem->Exec(Form("ln -s ../%s.par %s",pararchivename, kTrainName.Data()));
1471 gSystem->Exec(Form("tar xvzf %s.par", pararchivename));
1472
1473 TString ocwd = gSystem->WorkingDirectory();
1474 if (!gSystem->ChangeDirectory(pararchivename)) return -1;
1475
1476 // check for BUILD.sh and execute
1477 if (!gSystem->AccessPathName("PROOF-INF/BUILD.sh")) {
1478 printf("*******************************\n");
1479 printf("*** Building PAR archive ***\n");
1480 printf("*******************************\n");
1481 if (gSystem->Exec("PROOF-INF/BUILD.sh")) {
1482 Error("runProcess","Cannot Build the PAR Archive! - Abort!");
1483 return -1;
1484 }
1485 }
1486
1487 // check for SETUP.C and execute
1488 if (!gSystem->AccessPathName("PROOF-INF/SETUP.C")) {
1489 printf("*******************************\n");
1490 printf("*** Setup PAR archive ***\n");
1491 printf("*******************************\n");
1492 gROOT->Macro("PROOF-INF/SETUP.C");
1493 }
1494 if (!gSystem->ChangeDirectory(ocwd.Data())) return -1;
1495 return 0;
1496}
1497
1498//______________________________________________________________________________
1499AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode)
1500{
1501// Check if user has a valid token, otherwise make one. This has limitations.
1502// One can always follow the standard procedure of calling alien-token-init then
1503// source /tmp/gclient_env_$UID in the current shell.
c8fb37dd 1504// if (!AliAnalysisGrid::CreateToken()) return NULL;
c38e3b95 1505 AliAnalysisAlien *plugin = new AliAnalysisAlien();
1506// Set the run mode (can be "full", "test", "offline", "submit" or "terminate")
1507 plugin->SetRunMode(plugin_mode);
1508 if (kPluginUseProductionMode) plugin->SetProductionMode();
1509 plugin->SetJobTag(kJobTag);
e0c120d9 1510 plugin->SetNtestFiles(1);
c38e3b95 1511// plugin->SetPreferedSE("ALICE::NIHAM::File");
1512// Set versions of used packages
e84da0a5 1513 plugin->SetAPIVersion("V1.1x");
1514 // plugin->SetAPIVersion("V1.0x");
1515// plugin->SetAPIVersion("V2.4");
c38e3b95 1516 plugin->SetROOTVersion(kPluginRootVersion);
1517 plugin->SetAliROOTVersion(kPluginAliRootVersion);
1518// Declare input data to be processed.
1519// Method 1: Create automatically XML collections using alien 'find' command.
1520// Define production directory LFN
1521 plugin->SetGridDataDir(kGridDatadir.Data());
1522// Set data search pattern
1523 if (iAODanalysis) plugin->SetDataPattern(" *AliAOD.root");
c8fb37dd 1524 // else plugin->SetDataPattern(Form(" %s/*/*ESD.tag.root",kGridPassPattern.Data()));
1525 else plugin->SetDataPattern(Form(" %s/*/*AliESDs.root",kGridPassPattern.Data()));
c38e3b95 1526// ...then add run numbers to be considered
1527// plugin->SetRunRange(kGridRunRange[0], kGridRunRange[1]);
1528 for (Int_t i=kGridRunRange[0]; i<=kGridRunRange[1]; i++) {
1529 Printf("AnalysisTrainPWG4Jets Adding run number %s", Form(kGridRunPattern.Data(),i));
1530 plugin->AddRunNumber(Form(kGridRunPattern.Data(),i));
1531 }
1532
1533 if(kGridLocalRunList.Length()>0){
1534 ifstream in1;
1535 in1.open(kGridLocalRunList.Data());
1536 int iRun;
4d16db9c 1537 int icount = 0;
9a5c5b1e 1538 /*
e84da0a5 1539 char c;
1540 char cLine[250];
1541 while(!in1.eof()){
1542 c = in1.get();
1543 if ( (c >= '0') && (c <= '9') )
1544 {
1545 in1.putback (c);
1546 in1>>iRun;
1547 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1548 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
1549 }
1550 else
1551 {
1552 in1.putback (c);
1553 in1.getline(cLine,250);
9a5c5b1e 1554
1555 }
1556 }
1557 */
9748e967 1558
1559 Int_t nRun = 0;
9a5c5b1e 1560
1561 // just use run numbers, negatives will be excluded
1562 while(in1>>iRun){
4d16db9c 1563 if(iRun>= kGridOffsetRunFromList&&(nRun<kGridMaxRunsFromList)){
9a5c5b1e 1564 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1565 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
9748e967 1566 nRun++;
9a5c5b1e 1567 }
1568 else{
1569 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d", iRun);
e84da0a5 1570 }
c38e3b95 1571 }
1572 }
1573
1574// Method 2: Declare existing data files (raw collections, xml collections, root file)
1575// If no path mentioned data is supposed to be in the work directory (see SetGridWorkingDir())
1576// XML collections added via this method can be combined with the first method if
1577// the content is compatible (using or not tags)
1578// plugin->AddDataFile("tag.xml");
1579// plugin->AddDataFile("/alice/data/2008/LHC08c/000057657/raw/Run57657.Merged.RAW.tag.root");
1580// Define alien work directory where all files will be copied. Relative to alien $HOME.
3878a941 1581 TString alien_workdir = "";
1582
1583 if (iAODanalysis) alien_workdir += "analysisAOD";
1584 else alien_workdir += "analysisESD";
1585 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
1586 plugin->SetGridWorkingDir(alien_workdir.Data());
1587
c38e3b95 1588 // Declare alien output directory. Relative to working directory.
1589 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
1590 plugin->SetGridOutputDir(kGridOutdir);
1591
1592 // Add external packages
1593 if (iJETAN||iDIJETAN) {
23adcac8 1594 plugin->AddExternalPackage("boost::v1_43_0");
1595 plugin->AddExternalPackage("cgal::v3.6");
1596 plugin->AddExternalPackage("fastjet::v2.4.2");
c38e3b95 1597 }
1598
1599
1600 // set extra libs before par file compilation
1601 anaLibs += kGridExtraFiles;
1602 anaLibs = anaLibs.Strip();
e84da0a5 1603 Printf("anaLibs %s",anaLibs.Data());
1604 Printf("anaLibsExtra %s",anaLibsExtra.Data());
1605
1606 if (anaLibs.Length()) plugin->SetAdditionalLibs(anaLibs.Data());
1607 if (anaLibsExtra.Length()) plugin->SetAdditionalRootLibs(anaLibsExtra.Data());
c38e3b95 1608
1609 TString ana_sources = "";
1610 TString ana_add = "";
1611 if (kUsePAR && anaPars.Length()) {
1612 printf("%s\n", anaPars.Data());
1613 TObjArray *arr;
1614 TObjString *objstr;
1615 arr = anaPars.Tokenize(" ");
1616 TIter next(arr);
1617 while ((objstr=(TObjString*)next())) plugin->EnablePackage(objstr->GetString());
1618 delete arr;
1619 }
1620
1621// Declare the analysis source files names separated by blancs. To be compiled runtime
1622// using ACLiC on the worker nodes.
1623 ana_sources = anaSources.Strip();
1624// Declare all libraries (other than the default ones for the framework. These will be
1625// loaded by the generated analysis macro. Add all extra files (task .cxx/.h) here.
1626
1627 if (ana_sources.Length()) plugin->SetAnalysisSource(ana_sources);
1628 plugin->SetExecutableCommand(kPluginExecutableCommand.Data());
4721d8c5 1629 // Declare the output file names separated by blancs.
1630 // (can be like: file.root or file.root@ALICE::Niham::File)
c38e3b95 1631 plugin->SetMergeExcludes(kGridMergeExclude);
1632 plugin->SetMaxMergeFiles(kGridMaxMergeFiles);
1633 plugin->SetNrunsPerMaster(kGridRunsPerMaster);
9a5c5b1e 1634 plugin->SetMergeViaJDL(kPluginMergeViaJDL);
4721d8c5 1635 // Use fastread option
9a5c5b1e 1636 plugin->SetFastReadOption(kPluginFastReadOption);
4721d8c5 1637 // UseOverwrite mode
9a5c5b1e 1638 plugin->SetOverwriteMode(kPluginOverwriteMode);
4721d8c5 1639 // Optionally define the files to be archived.
1640 // plugin->SetOutputArchive("log_archive.zip:stdout,stderr@ALICE::NIHAM::File root_archive.zip:AliAOD.root,AOD.tag.root@ALICE::NIHAM::File");
dc6a7461 1641 plugin->SetOutputToRunNo(kPluginOutputToRunNumber); // write the output to subdirs named after run number
c38e3b95 1642
1643 // Put default output files to archive
1644 TString listhists = "";
1645 TString listaods = "";
1646 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1647 TIter next(mgr->GetOutputs());
1648 AliAnalysisDataContainer *output;
1649 while ((output=(AliAnalysisDataContainer*)next())) {
1650 const char *filename = output->GetFileName();
1651 if (!(strcmp(filename, "default"))) {
53c63663 1652 if (!mgr->GetOutputEventHandler()) continue;
c38e3b95 1653 filename = mgr->GetOutputEventHandler()->GetOutputFileName();
e84da0a5 1654 if (listaods.Length()) listaods += " ";
c38e3b95 1655 listaods += filename;
c38e3b95 1656 } else {
e84da0a5 1657 if(!listhists.Contains(filename)){
1658 if (listhists.Length()) listhists += " ";
c38e3b95 1659 listhists += filename;
1660 }
1661 }
1662 }
53c63663 1663
53c63663 1664 if (mgr->GetExtraFiles().Length()) {
e84da0a5 1665 if (listaods.Length()) listaods += " ";
53c63663 1666 listaods += mgr->GetExtraFiles();
c38e3b95 1667 }
53c63663 1668
1669 // if we do not fill the aod we do not need to store it
4721d8c5 1670 // kGridMergeExclude = listaods;
e84da0a5 1671
4721d8c5 1672 if(kSaveAOD!=0){
1673 TString outputFiles = "";
1674 outputFiles += mgr->GetExtraFiles();
1675 if (listhists.Length()) outputFiles += " ";
1676 outputFiles += listhists;
e84da0a5 1677 plugin->SetDefaultOutputs(kFALSE);
4721d8c5 1678 Printf("%s:%d Starting with the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
1679 // remove
1680 // no harm done when we try to remove something that is not there :)
1681 if(!(kSaveAOD&(1<<0))){
1682 outputFiles.ReplaceAll("AliAOD.root ","");
1683 listaods.ReplaceAll("AliAOD.root ","");
1684 }
1685 if(!(kSaveAOD&(1<<1))){
1686 if(kDeltaAODJetName.Length())outputFiles.ReplaceAll(kDeltaAODJetName.Data(),"");
1687 if(kDeltaAODJetName.Length())listaods.ReplaceAll(kDeltaAODJetName.Data(),"");
1688
1689 }
1690 if(!(kSaveAOD&(1<<2))){
1691 if(kDeltaAODPartCorrName.Length())outputFiles.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
1692 if(kDeltaAODPartCorrName.Length())listaods.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
1693 }
1694 if(!(kSaveAOD&(1<<3))){
1695 if(kDeltaAODJCORRANName.Length())outputFiles.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
1696 if(kDeltaAODJCORRANName.Length())listaods.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
1697 }
1698
1699 //
1700 Printf("%s:%d Saving the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
1701 plugin->SetOutputFiles(outputFiles.Data());
e84da0a5 1702 }
53c63663 1703
4721d8c5 1704 TString outputArchive;
4d5d766e 1705 outputArchive = Form("log_archive.zip:std*@%s","disk=1");
e84da0a5 1706 listaods.ReplaceAll(" ", ",");
1707 listhists.ReplaceAll(" ", ",");
4d5d766e 1708 if (listhists.Length()){
1709 outputArchive += " ";
1710 outputArchive += "root_archive.zip:";
1711 outputArchive += listhists;
1712 if (listaods.Length()){
1713 outputArchive += ",";
1714 outputArchive += listaods;
1715 }
1716 outputArchive += Form("@%s", kGridOutputStorages.Data());
1717 }
1718 else{
1719
1720 if (listaods.Length()){
1721 // we have only aod'ish output
1722 outputArchive += " ";
1723 outputArchive += "root_archive.zip:";
1724 outputArchive += listaods;
1725 outputArchive += Form("@%s", kGridOutputStorages.Data());
1726 }
1727 else{
1728 // no other outputs than std..
c38e3b95 1729 ::Fatal("AnalysisTrainPWG4Jets", "No task output !");
4d5d766e 1730 }
c38e3b95 1731 }
4d5d766e 1732
17d96675 1733 plugin->SetDefaultOutputs(kFALSE);
c38e3b95 1734 plugin->SetOutputArchive(outputArchive);
17d96675 1735
4721d8c5 1736
4d5d766e 1737 // Optionally set a name for the generated analysis macro (default MyAnalysis.C)
c38e3b95 1738 plugin->SetAnalysisMacro(Form("%s.C", kTrainName.Data()));
4d5d766e 1739 // Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)
c38e3b95 1740 plugin->SetSplitMaxInputFileNumber(kGridFilesPerJob);
4d5d766e 1741 // Optionally set number of failed jobs that will trigger killing waiting sub-jobs.
27cdf9c4 1742 // plugin->SetMaxInitFailed(5);
4d5d766e 1743 // Optionally resubmit threshold.
c8fb37dd 1744 // plugin->SetMasterResubmitThreshold(90);
4d5d766e 1745 // Optionally set time to live (default 30000 sec)
d4e8abc5 1746 plugin->SetTTL(54000); // 15h...
4d5d766e 1747 // Optionally set input format (default xml-single)
c38e3b95 1748 plugin->SetInputFormat("xml-single");
4d5d766e 1749 // Optionally modify the name of the generated JDL (default analysis.jdl)
c38e3b95 1750 plugin->SetJDLName(Form("%s.jdl", kTrainName.Data()));
4d5d766e 1751 // Optionally modify the executable name (default analysis.sh)
c38e3b95 1752 plugin->SetExecutable(Form("%s.sh", kTrainName.Data()));
4d5d766e 1753 // Optionally modify job price (default 1)
c38e3b95 1754 plugin->SetPrice(1);
4d5d766e 1755 // Optionally modify split mode (default 'se')
c38e3b95 1756 plugin->SetSplitMode("se");
1757 return plugin;
1758}
1759
1760//______________________________________________________________________________
1761void WriteConfig()
1762{
1763// Write train configuration in a file. The file name has the format:
1764// train_[trainName]_ddMonthyyyy_time.C
1765 if (kUseDate) {
1766 gSystem->Exec("date +%d%b%Y_%Hh%M > date.tmp");
1767 ifstream fdate("date.tmp");
1768 if (!fdate.is_open()) {
1769 ::Error("AnalysisTrainPWG4Jets.C::Export","Could not generate file name");
1770 return;
1771 }
1772 const char date[64];
1773 fdate.getline(date,64);
1774 fdate.close();
1775 gSystem->Exec("rm date.tmp");
1776 kTrainName = Form("train_%s_%s", kTrainName.Data(), date);
1777 } else {
1778 kTrainName = Form("train_%s", kTrainName.Data());
1779 }
1780 TString cdir = gSystem->WorkingDirectory();
1781 gSystem->MakeDirectory(kTrainName);
1782 gSystem->ChangeDirectory(kTrainName);
1783 ofstream out;
1784 out.open(Form("%sConfig.C",kTrainName.Data()), ios::out);
1785 if (out.bad()) {
1786 ::Error("AnalysisTrainPWG4Jets.C::Export", "Cannot open ConfigTrain.C for writing");
1787 return;
1788 }
1789 out << "{" << endl;
1790 out << " kTrainName = " << "\"" << kTrainName.Data() << "\";" << endl;
1791 out << " kProofCluster = " << "\"" << kProofCluster.Data() << "\";" << endl;
1792 out << " kProofUseAFPAR = " << kProofUseAFPAR << ";" << endl;
1793 if (kProofUseAFPAR)
1794 out << " kProofAFversion = " << kProofAFversion.Data() << ";" << endl;
1795 out << " kProofDataSet = " << "\"" << kProofDataSet.Data() << "\";" << endl;
1796 out << " kPluginUse = " << kPluginUse << ";" << endl;
1797 out << " kUsePAR = " << kUsePAR << ";" << endl;
1798 out << " kUseCPAR = " << kUseCPAR << ";" << endl;
1799 out << " kPluginRootVersion = " << "\"" << kPluginRootVersion.Data() << "\";" << endl;
1800 out << " kPluginAliRootVersion = " << "\"" << kPluginAliRootVersion.Data() << "\";" << endl;
1801 out << " kGridDatadir = " << "\"" << kGridDatadir.Data() << "\";" << endl;
1802 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
1803 out << " kGridOutdir = " << "\"" << kGridOutdir.Data() << "\";" << endl;
1804 out << " kGridMaxMergeFiles = " << kGridMaxMergeFiles << ";" << endl;
1805 out << " kGridMergeExclude = " << "\"" << kGridMergeExclude.Data() << "\";" << endl;
1806 out << " kGridRunsPerMaster = " << kGridRunsPerMaster << ";" << endl;
1807 out << " kGridFilesPerJob = " << kGridFilesPerJob << ";" << endl;
1808 out << " kGridRunRange[0] = " << kGridRunRange[0] << ";" << endl;
1809 out << " kGridRunRange[1] = " << kGridRunRange[1] << ";" << endl;
1810 out << " kUseDebug = " << kUseDebug << ";" << endl;
1811 out << " kUseMC = " << kUseMC << ";" << endl;
1812 out << " kUseESDTags = " << kUseESDTags << ";" << endl;
1813 out << " kUseKinefilter = " << kUseKinefilter << ";" << endl;
1814 out << " kUseTR = " << kUseTR << ";" << endl;
1815 out << " kUseAODTags = " << kUseAODTags << ";" << endl;
1816 out << " kSaveTrain = " << "kFALSE;" << endl << endl;
1817 out << " // Analysis modules" << endl;
1818 out << " iAODanalysis = " << iAODanalysis << ";" << endl;
1819 out << " iAODhandler = " << iAODhandler << ";" << endl;
1820 out << " iESDfilter = " << iESDfilter << ";" << endl;
1821 out << " iJETAN = " << iJETAN << ";" << endl;
1822 out << "// Configuration fot the wagons" << endl;
1823 out << "}" << endl;
1824 ::Info("AnalysisTrainPWG4Jets.C::WriteConfig", "Train configuration wrote to file %s", Form("config_%s.C", kTrainName.Data()));
1825 gSystem->ChangeDirectory(cdir);
1826}
1827
1828//______________________________________________________________________________
1829Bool_t LoadConfig(const char *filename)
1830{
1831// Read train configuration from file
1832 if (gSystem->AccessPathName(filename)) {
1833 ::Error("AnalysisTrainPWG4Jets.C::LoadConfig", "Config file name not found");
1834 return kFALSE;
1835 }
1836 gROOT->ProcessLine(Form(".x %s", filename));
1837 ::Info("AnalysisTrainPWG4Jets.C::LoadConfig", "Train configuration loaded from file %s", filename);
1838 return kTRUE;
1839}
1840
1841Bool_t PatchJDL(){
1842 Printf(">>> Patching JDL");
1843 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1844 AliAnalysisAlien* gridHandler = (AliAnalysisAlien*)mgr->GetGridHandler();
1845 TGridJDL *jdl = gridHandler->GetGridJDL();
1846 if(iJETAN)jdl->AddToPackages("fastjet","v2.4.0");
1847 gridHandler->WriteJDL(kFALSE);
0971dabc 1848 Printf("<<< Patching JDL");
c38e3b95 1849 return kTRUE;
1850}
1851
1852Bool_t PatchAnalysisMacro(){
4721d8c5 1853 Printf(">>> Patching AnalysisMacro");
1854 gSystem->Exec(Form("mv %s.C %s.C_tmp",kTrainName.Data(),kTrainName.Data()));
c38e3b95 1855
1856 ifstream in1;
1857 in1.open(Form("%s.C_tmp", kTrainName.Data()));
1858 char cLine[250];
1859 TString st;
1860 while(in1.getline(cLine,250)){
1861 st += cLine;
1862 st += "\n";
1863 }
4721d8c5 1864 Int_t index= -1;
c38e3b95 1865 index = st.Index("gSystem->Load(\"libPhysics\");");
1866 index += strlen("gSystem->Load(\"libPhysics\");");
4721d8c5 1867 /*
c38e3b95 1868 TObjArray *arr;
1869 TObjString *objstr;
1870 arr = anaLibs.Tokenize(" ");
1871 TIter next(arr);
4721d8c5 1872
c38e3b95 1873 add += "\n\n // added by CKB \n";
1874 while ((objstr=(TObjString*)next())){
e84da0a5 1875 if(objstr->GetString().Contains("PWG3"))continue;
c38e3b95 1876 if(objstr->GetString().EndsWith(".so"))add += Form("gSystem->Load(\"%s\");\n",objstr->GetString().Data());
1877 }
1878 delete arr;
4721d8c5 1879 */
3878a941 1880 // add += Form("AliLog::SetGlobalLogLevel(%d);\n",AliLog::GetGlobalLogLevel());
4721d8c5 1881 TString add = "";
1882
1883 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1884 add += "\n\n // added by CKB \n";
46534866 1885 if(kErrorIgnoreLevel>0)add += Form("gErrorIgnoreLevel = %d;\n",kErrorIgnoreLevel);
23adcac8 1886 add += "\n gSystem->AddIncludePath(\"./\"); \n";
4721d8c5 1887 if(gGrid&&kPluginAliRootVersion.Length()==0){
1888 add += "\n // Dirty hack for TRD reference data \n";
1889 add += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
1890 add += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
1891 add += "\"); \n";
c38e3b95 1892 }
4721d8c5 1893 add += "// BKC \n\n";
1894 st.Insert(index,add.Data());
e84da0a5 1895
1896 if(kUseDebug){
23adcac8 1897 // st.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
e84da0a5 1898 }
1899
4721d8c5 1900 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
1901 index = st.Index("gSystem->AddIncludePath(\"-I$"); // uncommen $ALICE_ROOT include for par files
1902 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1903 st.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
1904 }
c166d299 1905
46534866 1906 if(AliLog::GetGlobalLogLevel()==AliLog::kFatal){
1907 index = st.Index("AliLog::SetGlobal"); // ncomment setting of log level, do my own
1908 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1909 st.Insert(index,"AliLog::SetGlobalLogLevel(AliLog::kFatal);// CKB \n // CKB comment out for own setting \n //");
1910 }
1911
c38e3b95 1912 ofstream out;
1913 out.open(Form("%s.C", kTrainName.Data()));
1914 if (out.bad()) {
1915 return kFALSE;
1916 }
1917 out << st << endl;
1918 Printf("<<< Patching AnalysisMacro");
4721d8c5 1919
1920
1921
1922
1923
1924 Printf(">>> Patching Merge Macro");
1925 gSystem->Exec(Form("mv %s_merge.C %s_merge.C_tmp",kTrainName.Data(),kTrainName.Data()));
1926
1927 ifstream in2;
1928 in2.open(Form("%s_merge.C_tmp", kTrainName.Data()));
1929 TString st2;
1930 while(in2.getline(cLine,250)){
1931 st2 += cLine;
1932 st2 += "\n";
1933 }
1934 index = st2.Index("gSystem->Load(\"libPhysics\");");
1935 index += strlen("gSystem->Load(\"libPhysics\");");
1936 TString add2 = "";
23adcac8 1937 add2 += "\n gSystem->AddIncludePath(\"./\"); \n";
4721d8c5 1938 if(gGrid&&kPluginAliRootVersion.Length()==0){
1939 add2 += "\n // Dirty hack for TRD reference data \n";
1940 add2 += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
1941 add2 += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
1942 add2 += "\"); \n";
1943 }
1944 add2 += "// BKC \n\n";
1945 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1946 st2.Insert(index,add.Data());
1947
1948
1949 if(kUseDebug){
23adcac8 1950 // st2.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
4721d8c5 1951 }
1952
1953 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
46534866 1954 index = st2.Index("gSystem->AddIncludePath(\"-I$"); // uncomment $ALICE_ROOT include for par files
4721d8c5 1955 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1956 st2.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
1957 }
1958
1959 // do not exclude the extra files from merign, this is done explicitly in this train script
92d850d5 1960 // index = st2.Index("mergeExcludes +="); // uncommen $ALICE_ROOT include for par files
1961 // if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1962 // st2.Insert(index,"// CKB comment out, handled explicitly by the train macro \n //");
4721d8c5 1963
1964
1965 ofstream out2;
1966 out2.open(Form("%s_merge.C", kTrainName.Data()));
1967 if (out2.bad()) {
1968 return kFALSE;
1969 }
1970 out2 << st2 << endl;
1971 Printf("<<< Patching Merging Macro");
1972
1973
1974
c38e3b95 1975 return kTRUE;
1976
1977}