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[u/mrichter/AliRoot.git] / PWG4 / macros / AnalysisTrainPWG4Jets.C
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c38e3b95 1//===================== ANALYSIS TRAIN =========================================
2// To use: copy this macro to your work directory, modify the global part to match
3// your needs, then run root.
4// root[0] .L AnalysisTrain.C
5// Grid full mode as below (other modes: test, offline, submit, terminate)
121e4bd5 6// root[1] AnalysisTrainPWG-244Jets("grid", "full")
c38e3b95 7// CAF mode (requires root v5-23-02 + aliroot v4-16-Rev08)
8// root[2] AnalysisTrainPWG4Jets("proof")
9// Local mode requires AliESds.root or AliAOD.root in ./data directory
10// root[3] AnalysisTrainPWG4Jets("local")
11// In proof and grid modes, a token is needed and sourcing the produced environment file.
12//
13// If 'saveTrain' flag is set, the train will generate a directory name and run
14// in this directory. A configuration file 'ConfigTrain.C' will be generated.
15// One can replay at any time the train via:
16// root[1] AnalysisTrainPWG4Jets(ana_mode, plugin_mode, "train_default_<date>/ConfigTrain.C")
17
18// For Usage with fastjet run in "offline" first and then "submit"
19// jdl and analysismacro are automatically patched after "offline" mode
20
21// =============================================================================
22// ### General Steering variables
23// =============================================================================
24//== general setup variables
25TString kTrainName = "testAnalysis"; // *CHANGE ME* (no blancs or special characters)
26TString kJobTag = "PWG4 Jet Tasks analysis train configured"; // *CHANGE ME*
27
28// Usage of par files ONLY in grid mode and ONLY if the code is not available
29// in the deployed AliRoot versions. Par file search path: local dir, if not there $ALICE_ROOT.
30// To refresh par files, remove the ones in the workdir, then do "make <target.par>" in
31// AliRoot.
32Bool_t kUsePAR = kFALSE; // use par files for extra libs
33Bool_t kUseCPAR = kFALSE; // use par files for common libs
34Bool_t kFillAOD = kFALSE; // switch of AOD filling for on the fly analysis
a7e27517 35Bool_t kFilterAOD = kTRUE;
4721d8c5 36Int_t kSaveAOD = 8; // Bit switch 1 = Full AOD 2 = Jet AOD , 4 = PartCorr, 8 = JCORRAN
c38e3b95 37//== general input and output variables
9a5c5b1e 38
c38e3b95 39Int_t iAODanalysis = 1; // Analysis on input AOD's
40Int_t iAODhandler = 1; // Analysis produces an AOD or dAOD's
f4132e7d 41Int_t iCentralitySelection = 0; // Use the centrality
c38e3b95 42Int_t iESDfilter = 0; // ESD to AOD filter (barrel + muon tracks)
e84da0a5 43Int_t iPhysicsSelection = 1; // ESD to AOD filter (barrel + muon tracks)
d8f21f85 44UInt_t iPhysicsSelectionFlag = 1; // set by pyshics selection and passed to the task, kMB, kUserDefined etc
cfd02305 45Bool_t useTender = kFALSE; // use tender wagon
c38e3b95 46Bool_t kUseKinefilter = kFALSE; // use Kinematics filter
47Bool_t kUseMuonfilter = kFALSE; // use Kinematics filter
48TString kCommonOutputFileName = "PWG4_JetTasksOutput.root";
9748e967 49TString kCaloQAOutputFileName = "PWG4_CaloQAOutput.root";
c38e3b95 50
51
52//== general process variables
53
54// ### Other flags to steer the analysis
55//==============================================================================
9a5c5b1e 56Bool_t kSkipTerminate = kTRUE; // Do not call Teminate
c38e3b95 57Bool_t kUseDate = kFALSE; // use date in train name
58Bool_t kUseDebug = kTRUE; // activate debugging
46534866 59Int_t kErrorIgnoreLevel = -1; // takes the errror print level from .rootrc
60// From TError.h:
61// const Int_t kUnset = -1;
62// const Int_t kPrint = 0;
63// const Int_t kInfo = 1000;
64// const Int_t kWarning = 2000;
65// const Int_t kError = 3000;
66// const Int_t kBreak = 4000;
67// const Int_t kSysError = 5000;
68// const Int_t kFatal = 6000;
69Int_t kUseSysInfo = 0; // activate debugging
d8f21f85 70Long64_t kNumberOfEvents = 1234567890; // number of events to process from the chain
c38e3b95 71Bool_t kUseMC = kTRUE; // use MC info
72Bool_t kIsMC = kTRUE; // is MC info, if false it overwrites Use(AOD)MC
73Bool_t kUseAODMC = kTRUE; // use MC infA
74Bool_t kUseESDTags = kFALSE; // use ESD tags for selection
75Bool_t kUseTR = kFALSE; // use track references
76Bool_t kUseAODTags = kFALSE; // use AOD tags
77Bool_t kSaveTrain = kFALSE; // save train configuration as:
f4132e7d 78Bool_t kIsPbPb = kFALSE; // Pb+Pb
c38e3b95 79
9a5c5b1e 80
c38e3b95 81// ### Analysis modules to be included. Some may not be yet fully implemented.
82//==============================================================================
83Int_t iJETAN = 1; // Jet analysis (PWG4) // 1 write standard 2 write non-standard jets, 3 wrtie both
a7e27517 84Int_t iJETSUBTRACT = 1; // Jet background subtration
d8f21f85 85TString kDefaultJetBranch = ""; // is currently set when filled (iJETAN or clusters) or from config macro
86TString kDefaultJetBackgroundBranch = ""; // is currently set when filled (jet clsuters
a7e27517 87TString kJetSubtractBranches = ""; // is currently set when filled (jet clsuters
88
d8f21f85 89TString kDefaultJetBranchMC = ""; // is currently set when filled (iJETAN or clusters) or from config macro
90TString kDefaultJetBackgroundBranchMC = ""; // is currently set when filled (jet clsuters
91TString kDefaultJetBranchMC2 = ""; // is currently set when filled (iJETAN or clusters) or from config macro
92TString kDefaultJetBackgroundBranchMC2 = ""; // is currently set when filled (jet clsuters
a31b8a87 93TString kJetSubtractMask1 = "B0";
94TString kJetSubtractMask2 = "B%d";
c38e3b95 95Int_t iDIJETAN = 1;
e6993a52 96Int_t iJETANLib = 1;
c38e3b95 97Int_t iPWG1QASym = 0; // Eva's QA task compiled on the fly...
36c36a0c 98Int_t iPWG4FastEmbedding = 0; // Generate non-standard AOD for embedding
c38e3b95 99Int_t iPWG4JetTasks = 0; // all jet tasks flag for lib laoding
100Int_t iPWG4JetServices = 0; // jet spectrum analysis
101Int_t iPWG4JetSpectrum = 0; // jet spectrum analysis
bbb42949 102Int_t iPWG4JetResponse = 0; // jet response matrix
58ef946c 103Int_t iPWG4JCORRAN = 0; // JCORRAN module
c38e3b95 104Int_t iPWG4UE = 0; // Underlying Event analysis
e0c120d9 105Int_t iPWG4LeadingUE = 0; // Underlying Event analysis
106Int_t iPWG4CorrectionsUE = 0; // Underlying Event analysis
c166d299 107Int_t iPWG4TmpSourceSara = 0; // Underlying Event analysis not in svn
aba42fcb 108Int_t iPWG4Fragmentation = 0; // Official Fragmentation
9f77f0ce 109Int_t iPWG4JetChem = 0; // Jet chemistry
c38e3b95 110Int_t iPWG4PtQAMC = 0; // Marta's QA tasks
111Int_t iPWG4PtSpectra = 0; // Marta's QA tasks
112Int_t iPWG4PtQATPC = 0; // Marta's QA tasks
4721d8c5 113Int_t iPWG4Cosmics = 0; // Marta's Cosmics Taks
c38e3b95 114Int_t iPWG4ThreeJets = 0; // Sona's thrust task
cc636095 115Int_t iPWG4QGSep = 0; // Sona's QG Separation task
116Int_t iPWG4Minijet = 0; // Eva's Mini Jet Task cluster task
b53f2e4f 117Int_t iPWG4KMeans = 0; // Andreas' KMeans task
d2e6cdd5 118Int_t iPWG4Cluster = 0; // CKB cluster task
4721d8c5 119Int_t iEMCUtilLibs = 0; // Flag to satisfy dependence on EMC utils
911a740f 120Int_t iPWG4PartCorrLibs = 0; // Gustavo's part corr analysis
c38e3b95 121Int_t iPWG4PartCorr = 0; // Gustavo's part corr analysis
d2e6cdd5 122Int_t iPWG4CaloQA = 0; // Gustavo's part corr analysis
123Int_t iPWG4JetCorr = 0; // Paul's jet corr analysis
911a740f 124Int_t iPWG4Tagged = 0; // Gustavo's part corr analysis
121e4bd5 125Int_t iPWG4omega3pi = 0; // Omega to 3 pi analysis (PWG4)
17d96675 126Int_t iPWG4GammaConvLib = 0; // Gamma Conversio
53c63663 127Int_t iPWG4GammaConv = 0; // Gamma Conversio
17d96675 128Int_t iPWG4CaloConv = 0; // Gamma Conversio
22e3ae6c 129Int_t kHighPtFilterMask = 32; // change depending on the used AOD Filter
e6993a52 130TString kDeltaAODJetName = "AliAOD.Jets.root";
4721d8c5 131TString kDeltaAODJCORRANName = "AliAOD.JCORRAN.root";
f4132e7d 132TString kDeltaAODPartCorrName = "AliAOD.PartCorr.root";
36c36a0c 133TString kFastEmbeddingAOD = "emb/AliAOD.root";
c38e3b95 134
135//==============================================================================
136// ### PROOF Steering varibales
137//==============================================================================
138//== proof setup variables
139TString kProofCluster = "alicecaf.cern.ch";
140Bool_t kProofUseAFPAR = kFALSE; // use AF special par file
141TString kProofAFversion = "AF-v4-17";
142//== proof input and output variables
143TString kProofDataSet = "/COMMON/COMMON/LHC09a4_run8100X#/esdTree";
144Bool_t kProofSaveToAlien = kFALSE; // save proof outputs in AliEn train_[trainName]_ddMonthyyyy_time.C
145TString kProofOutdir = "";
146Bool_t kProofClearPackages = kFALSE;
147Int_t kProofEvents = 10000;
148Int_t kProofOffset = 0;
149//== proof process variables
150
151
152//==============================================================================
153// ### Grid plugin Steering varibiables
154//==============================================================================
155//== grid plugin setup variables
156Bool_t kPluginUse = kTRUE; // do not change
157Bool_t kPluginUseProductionMode = kFALSE; // use the plugin in production mode
39e7e8ab 158TString kPluginRootVersion = "v5-27-06b"; // *CHANGE ME IF MORE RECENT IN GRID*
d3af0232 159TString kPluginAliRootVersion = "v4-19-15-AN"; // *CHANGE ME IF MORE RECENT IN GRID*
9a5c5b1e 160Bool_t kPluginMergeViaJDL = kTRUE; // merge via JDL
161Bool_t kPluginFastReadOption = kFALSE; // use xrootd tweaks
162Bool_t kPluginOverwriteMode = kTRUE; // overwrite existing collections
dc6a7461 163Int_t kPluginOutputToRunNumber = 1; // write the output to subdirs named after run number
c38e3b95 164// TString kPluginExecutableCommand = "root -b -q";
165TString kPluginExecutableCommand = "source /Users/kleinb/setup_32bit_aliroot_trunk_clean_root_trunk.sh; alienroot -b -q ";
9a5c5b1e 166
c38e3b95 167// == grid plugin input and output variables
168TString kGridDatadir = "/alice/sim/PDC_08b/LHC09a1/AOD/";
9748e967 169Int_t kGridMaxRunsFromList = 999999999;
4d16db9c 170Int_t kGridOffsetRunFromList = 0; // skip the first n runs from the list
c38e3b95 171TString kGridLocalRunList = "";
172TString kGridOutdir = ""; // AliEn output directory. If blank will become output_<kTrainName>
3878a941 173TString kGridDataSet = ""; // sub working directory not to confuse different run xmls
9748e967 174Int_t kGridRunRange[2] = {0, -1}; // Set the run range
c38e3b95 175TString kGridRunPattern = "%03d"; // important for leading zeroes!!
176TString kGridPassPattern = "";
177TString kGridExtraFiles = ""; // files that will be added to the input list in the JDL...
9748e967 178Int_t kGridMaxMergeFiles = 12; // Number of files merged in a chunk grid run range
c38e3b95 179TString kGridMergeExclude = "AliAOD.root"; // Files that should not be merged
6408fe42 180TString kGridOutputStorages = "disk=2"; // Make replicas on the storages
c38e3b95 181// == grid process variables
c28abe00 182Int_t kGridRunsPerMaster = 100; // Number of runs per master job
e84da0a5 183Int_t kGridFilesPerJob = 100; // Maximum number of files per job (gives size of AOD)
c38e3b95 184
185//==============================================================================
186// ### Local Steering variables
187//==============================================================================
188//== local setup variables
189//== local input and output variables
190TString kLocalXMLDataset = ""; // Change local xml dataset for local interactive analysis
191TString kLocalDataList = "local_deltaaod.txt"; // Change local xml dataset for local interactive analysis
192// == local process variables
193
8ecf60e0 194TString kPluginMode;
c38e3b95 195
196
197// Temporaries.
198TString anaPars = "";
199TString anaLibs = "";
e84da0a5 200TString anaLibsExtra = "";
c38e3b95 201TString anaSources = "";
202// Function signatures
203class AliAnalysisAlien;
204
205//______________________________________________________________________________
206void AnalysisTrainPWG4Jets(const char *analysis_mode="local",
207 const char *plugin_mode="",
4d16db9c 208 const char *config_file="",Int_t iOffset = 0,Int_t iTotal = 0)
c38e3b95 209{
210// Main analysis train macro. If a configuration file is provided, all parameters
211// are taken from there but may be altered by CheckModuleFlags.
3878a941 212
8ecf60e0 213 // these flag may be needed by the config file
214 kPluginMode = plugin_mode;
215
216 if (strlen(config_file) && !LoadConfig(config_file)) return;
4d16db9c 217 if(iTotal>0)kGridMaxRunsFromList = iTotal; // overwrites the settings from config file
218 if(iOffset)kGridOffsetRunFromList = iOffset;
219 if(iOffset)kProofOffset = iOffset;
220
3878a941 221
c38e3b95 222 TString smode(analysis_mode);
223 smode.ToUpper();
224 if (kSaveTrain)WriteConfig();
8ecf60e0 225 // Check compatibility of selected modules
c38e3b95 226 CheckModuleFlags(smode);
ebad39a9 227 // gROOT->ProcessLine(".trace");
c38e3b95 228
229 printf("==================================================================\n");
230 printf("=========== RUNNING ANALYSIS TRAIN %s IN %s MODE ==========\n", kTrainName.Data(),smode.Data());
231 printf("==================================================================\n");
9748e967 232 printf("= Configuring analysis train for: =\n");
c38e3b95 233 if (iAODanalysis) printf("= AOD analysis =\n");
9748e967 234 else printf("= ESD analysis =\n");
235 if (iPhysicsSelection) printf("= Physics selection =\n");
f4132e7d 236 if(iCentralitySelection)printf("= Centrality selection =\n");
cfd02305 237 if (useTender) printf("= Using tender =\n");
c38e3b95 238 if (iESDfilter) printf("= ESD filter =\n");
239 if (iJETAN) printf("= Jet analysis =\n");
240 printf("==================================================================\n");
9748e967 241
242 char *printMask = ":: %20s %10d\n";
243 printf(printMask,"Fill AOD",(UInt_t)kFillAOD);
244 printf(printMask,"Save AOD", (UInt_t)kSaveAOD);
245 printf(printMask,"MC truth", (UInt_t)kUseMC);
246 printf(printMask,"KINE filter", (UInt_t)kUseKinefilter);
247 printf(printMask,"track refs", (UInt_t)kUseTR);
248 printf(printMask,"tags", (UInt_t)kUseESDTags);
249 printf(printMask,"AOD tags", (UInt_t)kUseAODTags);
250 printf(printMask,"debugging", (UInt_t)kUseDebug);
251 printf(printMask,"PAR files", (UInt_t)kUsePAR);
252 printf(printMask,"AliEn plugin", (UInt_t)kPluginUse);
a7e27517 253 printf(printMask,"JETAN subtract", (UInt_t)iJETSUBTRACT);
9748e967 254 printf(printMask,"PWG1 QA sym", iPWG1QASym);
255 printf(printMask,"PWG4 Source Sara",iPWG4TmpSourceSara);
aba42fcb 256 printf(printMask,"PWG4 Fragmentation",iPWG4Fragmentation);
9748e967 257 printf(printMask,"PWG4 Jet Chem",iPWG4JetChem);
258 printf(printMask,"PWG4 Jet tasks",iPWG4JetTasks);
259 printf(printMask,"PWG4 Jet Services",iPWG4JetServices);
260 printf(printMask,"PWG4 Jet Spectrum",iPWG4JetSpectrum);
261 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
262 printf(printMask,"PWG4 UE",iPWG4UE);
e0c120d9 263 printf(printMask,"PWG4 Leading UE",iPWG4LeadingUE);
9748e967 264 printf(printMask,"PWG4 Corrections UE",iPWG4CorrectionsUE);
265 printf(printMask,"PWG4 Pt QA MC",iPWG4PtQAMC);
266 printf(printMask,"PWG4 Pt Spectra",iPWG4PtSpectra);
267 printf(printMask,"PWG4 Pt QA TPC",iPWG4PtQATPC);
268 printf(printMask,"PWG4 Cosmics",iPWG4Cosmics);
269 printf(printMask,"PWG4 Three Jets",iPWG4ThreeJets);
cc636095 270 printf(printMask,"PWG4 QGSep",iPWG4QGSep);
271 printf(printMask,"PWG4 Minijet",iPWG4Minijet);
9748e967 272 printf(printMask,"PWG4 KMeans",iPWG4KMeans);
273 printf(printMask,"PWG4 Cluster",iPWG4Cluster);
274 printf(printMask,"PWG4 Part Corr",iPWG4PartCorr);
275 printf(printMask,"PWG4 Calo QA",iPWG4CaloQA);
276 printf(printMask,"PWG4 Jet Corr",iPWG4JetCorr);
277 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
278 printf(printMask,"PWG4 Tagged",iPWG4Tagged);
279 printf(printMask,"PWG4 omega to 3 pi ",iPWG4omega3pi);
280 printf(printMask,"PWG4 Gamma Conv",iPWG4GammaConv);
17d96675 281 printf(printMask,"PWG4 Calo Conv",iPWG4CaloConv);
9748e967 282 printf(printMask,"HighPt FilterMask",kHighPtFilterMask);
3878a941 283
c38e3b95 284 //==========================================================================
285 // Connect to back-end system
286 if (!Connect(smode)) {
287 ::Error("AnalysisTrain", "Could not connect to %s back-end", analysis_mode);
288 return;
289 }
290
291 // Load common libraries and set include path
292 if (!LoadCommonLibraries(smode)) {
293 ::Error("AnalysisTrain", "Could not load common libraries");
294 return;
295 }
3878a941 296
297
c38e3b95 298
299 // Make the analysis manager and connect event handlers
e84da0a5 300 AliAnalysisManager *mgr = new AliAnalysisManager("PWG4Train", "pwg4 mini train");
c38e3b95 301 if (kCommonOutputFileName.Length()>0)mgr->SetCommonFileName(kCommonOutputFileName.Data());
302 if (kProofSaveToAlien) mgr->SetSpecialOutputLocation(kProofOutdir);
4a6f59cb 303 mgr->SetNSysInfo(0);
c38e3b95 304 if (!strcmp(plugin_mode, "test")) mgr->SetNSysInfo(1);
53c63663 305 if (kUseSysInfo)mgr->SetNSysInfo(kUseSysInfo);
9a5c5b1e 306 mgr->SetSkipTerminate(kSkipTerminate);
4a6f59cb 307
c38e3b95 308 // Load analysis specific libraries
309 if (!LoadAnalysisLibraries(smode)) {
310 ::Error("AnalysisTrain", "Could not load analysis libraries");
311 return;
312 }
313
314 // Create input handler (input container created automatically)
315 if (iAODanalysis) {
316 // AOD input handler
317 AliAODInputHandler *aodH = new AliAODInputHandler();
318 mgr->SetInputEventHandler(aodH);
ffab794c 319 // if (iPWG4JetTasks) aodH->AddFriend(Form("deltas/%s",kDeltaAODJetName.Data()));
320 // if (iPWG4PartCorr) aodH->AddFriend(Form("deltas/%s"kDeltaAODJetName.Data()));
c38e3b95 321 } else {
322 // ESD input handler
323 AliESDInputHandler *esdHandler = new AliESDInputHandler();
324 if (kUseESDTags) esdHandler->SetReadTags();
c166d299 325 esdHandler->SetReadFriends(kFALSE);
c38e3b95 326 mgr->SetInputEventHandler(esdHandler);
4a6f59cb 327 // if(iPWG4PtQATPC&& !kTrainName.Contains("pass5"))esdHandler->SetActiveBranches("ESDfriend");
c166d299 328
c38e3b95 329 }
f4d11ac8 330
c38e3b95 331 // Monte Carlo handler
332 if (kUseMC && !iAODanalysis) {
333 AliMCEventHandler* mcHandler = new AliMCEventHandler();
334 mgr->SetMCtruthEventHandler(mcHandler);
335 mcHandler->SetReadTR(kUseTR);
336 }
337 // AOD output container, created automatically when setting an AOD handler
338 if (iAODhandler) {
339 // AOD output handler
340 AliAODHandler* aodHandler = new AliAODHandler();
341 aodHandler->SetOutputFileName("AliAOD.root");
6408fe42 342 aodHandler->SetFillAODforRun(kFillAOD);
121e4bd5 343 //
f4132e7d 344 mgr->SetOutputEventHandler(aodHandler);
c38e3b95 345 AliAnalysisDataContainer * cout_aod = mgr->GetCommonOutputContainer();
346 cout_aod->SetSpecialOutput();
347 }
348 // Debugging if needed
b03b08a3 349
3878a941 350 if (kUseDebug){
351 mgr->SetDebugLevel(3);
352 }
4721d8c5 353 if(kUseSysInfo>0){
354 mgr->RegisterExtraFile("syswatch.root");
355 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
356 kGridMergeExclude += "syswatch.root";
357 }
b03b08a3 358 else{
359 AliLog::SetGlobalLogLevel(AliLog::kError);
360 }
46534866 361
362
c38e3b95 363 //==========================================================================
364 // Create the chain. In this example it is created only from ALIEN files but
365 // can be done to work in batch or grid mode as well.
366 TChain *chain = CreateChain(smode, plugin_mode);
367
368 //==========================================================================
369 // Load the tasks configuration macros for all wagons. These files are supposed now to be
370 // in the current workdir, but in AliEn they will be in the file catalog,
371 // mapped from AliRoot and pecified in the jdl input list.
372
373 // For now connection to top input container and common AOD output container
374 // is done in this macro, but in future these containers will be connected
375 // from each task configuration macro.
cfd02305 376
377 //
378 // Tender and supplies. Needs to be called for every event.
379 //
380 if (useTender) {
381 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/TenderSupplies/AddTaskTender.C");
382 AliAnalysisTaskSE *tender = AddTaskTender(kTRUE);
383 // tender->SelectCollisionCandidates();
384 tender->SetDebugLevel(2);
385 }
386
387
388
e84da0a5 389 if(iPhysicsSelection && !iAODanalysis){
d2e6cdd5 390 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskPhysicsSelection.C");
39e7e8ab 391 Int_t iTriggerHIC = 0;
392 Bool_t rejectBkg = true;
f4132e7d 393 if(kIsPbPb){
39e7e8ab 394 iTriggerHIC = 2;
395 rejectBkg = false; // for the moment...
396 }
397 AliPhysicsSelectionTask* physSelTask = AddTaskPhysicsSelection(kIsMC,rejectBkg);
398 iPhysicsSelectionFlag = AliVEvent::kMB;
d8f21f85 399 // mgr->RegisterExtraFile("EventStat_tmp.root");
e84da0a5 400 }
401
f4132e7d 402 if(iCentralitySelection){
403
404 // has to run before AOD filter
d8f21f85 405 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskCentrality.C");
406 // const char* file1="$ALICE_ROOT/ANALYSIS/macros/AliCentralityBy1D_137161.root";
407 // const char* file2="$ALICE_ROOT/ANALYSIS/macros/AliCentralityByFunction_137161.root";
408 AliCentralitySelectionTask *taskC = AddTaskCentrality();
f4132e7d 409 if (!taskC) ::Warning("AnalysisTrainPWG4Jets", "AliCentralitySelectionTask cannot run for this train conditions - EXCLUDED");
410 }
411
c38e3b95 412 if (iESDfilter && !iAODanalysis) {
413 // ESD filter task configuration.
ebad39a9 414 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskESDFilterPWG4Train.C");
c38e3b95 415 AliAnalysisTaskESDfilter *taskesdfilter = AddTaskESDFilter(kUseKinefilter,kUseMuonfilter);
a7e27517 416 taskesdfilter->SetEnableFillAOD(!kFilterAOD);
f4132e7d 417
4721d8c5 418 if(kIsMC){
419 mgr->RegisterExtraFile("pyxsec_hists.root");
420 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
421 kGridMergeExclude += "pyxsec_hists.root";
422
423 }
c38e3b95 424 }
425
426 // AOD tags
427 if (kUseAODTags) {
428 AliAnalysisTaskTagCreator* tagTask = new AliAnalysisTaskTagCreator("AOD Tag Creator");
429 mgr->AddTask(tagTask);
430 AliAnalysisDataContainer *coutTags = mgr->CreateContainer("cTag", TTree::Class(),
431 AliAnalysisManager::kOutputContainer, "AOD.tag.root");
432 mgr->ConnectInput (tagTask, 0, mgr->GetCommonInputContainer());
433 mgr->ConnectOutput(tagTask, 1, coutTags);
434 }
bbb42949 435
36c36a0c 436 if (iPWG4FastEmbedding) {
bbb42949 437 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskFastEmbedding.C");
36c36a0c 438 AliAnalysisTask *taskEmbedding = AddTaskFastEmbedding(kFastEmbeddingAOD);
439 }
440
c38e3b95 441 // Jet analysis
442 if (iJETAN) {
443 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJets.C");
444 AliAnalysisTaskJets *taskjets = 0;
070f06d2 445 if(iJETAN&1){
446 /*
447 taskjets = AddTaskJets(kHighPtFilterMask);
448 taskjets->SetName("StandardJets");
449 taskjets->SetNonStdBranch("");
450 */
451 }
b53f2e4f 452 if(iJETAN&2){
070f06d2 453 // Set only few jet finders backgroudn subtraction w an wo
454
d8f21f85 455 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
20b170eb 456 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
d8f21f85 457
458 // STANDARD UA jet finders pT cut 1 GeV background mode 2 R = 0.4
459 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
20b170eb 460 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
d8f21f85 461 // EXTRA UA1 Jet finder same as above with R = 0.2
070f06d2 462
d8f21f85 463
4478beda 464 TString cTmp("");
d8f21f85 465
466 // SICONE
467 taskjets = AddTaskJets("AOD","SISCONE",0.4,kHighPtFilterMask,0.15,0); //no background subtraction to be done later....
468 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
4478beda 469 cTmp = taskjets->GetNonStdBranch();
470 if(cTmp.Length()>0)kJetSubtractBranches += Form("%s ",cTmp.Data());
d8f21f85 471 if(kUseAODMC){
472 // STANDARD UA jet finders pT cut 1 GeV background mode 2 R = 0.4
473 taskjets = AddTaskJets("AODMC","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
474 taskjets = AddTaskJets("AODMC2","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
17d96675 475 }
d8f21f85 476
477
478 if(kDeltaAODJetName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJetName.Data());
b53f2e4f 479 }
c38e3b95 480 if (!taskjets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
481 }
482
d8f21f85 483
36c36a0c 484 if (iPWG4FastEmbedding && iJETAN) {
485 AliAnalysisTaskJets *taskEmbJets = AddTaskJets("AODextra", "FASTKT", 0.4, kHighPtFilterMask);
486 taskEmbJets->ReadAODFromOutput();
487 taskEmbJets = AddTaskJets("AODextraonly", "FASTKT", 0.4, kHighPtFilterMask);
488 taskEmbJets->ReadAODFromOutput();
489 }
490
bd80a748 491 if(iPWG4Cluster){
492 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCluster.C");
493 AliAnalysisTaskJetCluster *taskCl = 0;
ffab794c 494 Float_t fCenUp = 0;
495 Float_t fCenLo = 0;
1c79997e 496 if(kIsPbPb&&!kIsMC){
ffab794c 497 fCenLo = 0;
498 fCenUp = 80;
499 }
bd80a748 500 if(iPWG4Cluster&1){
f4132e7d 501 if(kIsPbPb){
070f06d2 502 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
503 taskCl->SetBackgroundCalc(kTRUE);
504 taskCl->SetCentralityCut(fCenLo,fCenUp);
505 taskCl->SetGhostEtamax(0.9);
d8f21f85 506 kDefaultJetBackgroundBranch = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
507
a1d44e31 508 if (iPWG4FastEmbedding) {
509 taskClEmb = AddTaskJetCluster("AODextra","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
510 taskClEmb->SetBackgroundCalc(kFALSE);
511 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
512 taskClEmb->SetGhostEtamax(0.9);
513
514 taskClEmb = AddTaskJetCluster("AODextraonly","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
515 taskClEmb->SetBackgroundCalc(kFALSE);
516 taskClEmb->SetCentralityCut(fCenLo,fCenUp);
517 taskClEmb->SetGhostEtamax(0.9);
518 }
519
d8f21f85 520 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.2,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
f4132e7d 521 taskCl->SetBackgroundCalc(kTRUE);
ffab794c 522 taskCl->SetCentralityCut(fCenLo,fCenUp);
f4132e7d 523 taskCl->SetGhostEtamax(0.9);
524 }
525 else{
526 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1,kDeltaAODJetName.Data()); // this one is for the background jets
527 taskCl->SetBackgroundCalc(kTRUE);
d8f21f85 528 kDefaultJetBackgroundBranch = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
529 }
4478beda 530
070f06d2 531 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15);
ffab794c 532 taskCl->SetCentralityCut(fCenLo,fCenUp);
d8f21f85 533 taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
a31b8a87 534 taskCl->SetNRandomCones(10);
d8f21f85 535 kDefaultJetBranch = taskCl->GetJetOutputBranch();
bbb42949 536 if(kDeltaAODJetName.Length()==0&&kFilterAOD)taskCl->SetJetTriggerPtCut(40.);
a7e27517 537 kJetSubtractBranches += Form("%s ",taskCl->GetJetOutputBranch());
538
d8f21f85 539 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.2,0,1,kDeltaAODJetName.Data(),0.15);
070f06d2 540 taskCl->SetCentralityCut(fCenLo,fCenUp);
d8f21f85 541 taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
a7e27517 542 kJetSubtractBranches += Form("%s ",taskCl->GetJetOutputBranch());
543
d4e8abc5 544 if(kUseAODMC){
1c79997e 545 if(kIsPbPb){
d8f21f85 546 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
547 taskCl->SetBackgroundCalc(kTRUE);
548 taskCl->SetGhostEtamax(0.9);
549 kDefaultJetBackgroundBranchMC = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
1c79997e 550
d8f21f85 551 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
552 taskCl->SetBackgroundCalc(kTRUE);
553 taskCl->SetGhostEtamax(0.9);
554 kDefaultJetBackgroundBranchMC2 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
1c79997e 555 }
556 else{
d8f21f85 557 // pp background calcs...
558 }
559
560 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
561 taskCl->SetGhostEtamax(0.9);
562 taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchMC.Data());
563 kDefaultJetBranchMC = taskCl->GetJetOutputBranch();
1c79997e 564
d8f21f85 565 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
566 taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchMC2.Data());
567 kDefaultJetBranchMC2 = taskCl->GetJetOutputBranch();
1c79997e 568
d4e8abc5 569 }
d8f21f85 570
571
bd80a748 572 if (!taskCl) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCluster cannot run for this train conditions - EXCLUDED");
573 }
bd80a748 574 }
575
a7e27517 576 if(iJETSUBTRACT){
577 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetBackgroundSubtract.C");
578 AliAnalysisTaskJetBackgroundSubtract *taskSubtract = 0;
579 if(kJetSubtractBranches.Length()){
a31b8a87 580
4478beda 581 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches,3,kJetSubtractMask1.Data(),kJetSubtractMask2.Data());
582 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
583
584 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches,2,kJetSubtractMask1.Data(),kJetSubtractMask2.Data());
a7e27517 585 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
a31b8a87 586 taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
587 // taskSubtract->SetDebugLevel(3);
588
4478beda 589 taskSubtract = AddTaskJetBackgroundSubtract(kJetSubtractBranches,1,kJetSubtractMask1.Data(),kJetSubtractMask2.Data());
a31b8a87 590 taskSubtract->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
591 taskSubtract->SelectCollisionCandidates(iPhysicsSelectionFlag);
a7e27517 592 if(kJetSubtractBranches.Contains(kDefaultJetBranch.Data())){
a31b8a87 593 kDefaultJetBranch.ReplaceAll(taskSubtract->GetToReplace(),Form(taskSubtract->GetReplacementMask(),taskSubtract->GetSubtractionMethod()));
a7e27517 594 }
a7e27517 595 }
596 if (!taskSubtract) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetBackgroundSubtrac cannot run for this train conditions - EXCLUDED");
597 }
598
c38e3b95 599 if (iDIJETAN) {
600 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskDiJets.C");
601 AliAnalysisTaskDiJets *taskdijets = 0;
82ebd295 602 if(iDIJETAN&1)taskdijets = AddTaskDiJets();
c38e3b95 603 if (!taskdijets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
82ebd295 604 if(iDIJETAN&2){
605 taskdijets = AddTaskDiJets("jetsAOD_CDF07");
606 taskdijets = AddTaskDiJets("jetsAOD_DA07");
607 taskdijets = AddTaskDiJets("jetsAOD_FASTJET07");
608 taskdijets = AddTaskDiJets("jetsAOD_FASTKT07");
609 taskdijets = AddTaskDiJets("jetsAOD_SISCONE07");
610 taskdijets = AddTaskDiJets("jetsAOD_UA107");
611 }
c38e3b95 612 }
613
c38e3b95 614 if(iPWG1QASym){
5dbdc61f 615 gROOT->LoadMacro("$ALICE_ROOT/PWG1/PilotTrain/AddTaskQAsym.C");
c38e3b95 616 AliAnalysisTaskQASym *taskQASym = AddTaskQAsym(-1);
617 if (!taskQASym) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQASym cannot run for this train conditions - EXCLUDED");
121e4bd5 618 }
c38e3b95 619
121e4bd5 620
621
622 if(iPWG4TmpSourceSara){
623 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskEta.C");
624 AliAnalysisTaskEta *taskEta = AddTaskEta();
625 if (!taskEta) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskEta cannot run for this train conditions - EXCLUDED");
c38e3b95 626 }
627
c580ebbb 628
c38e3b95 629 if(iPWG4JetServices){
630 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetServices.C");
631 AliAnalysisTaskJetServices *taskjetServ = 0;
632 taskjetServ = AddTaskJetServices();
633 if (!taskjetServ) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetServices cannot run for this train conditions - EXCLUDED");
53c63663 634 if(kGridRunRange[0]>0)taskjetServ->SetRunRange(kGridRunRange[0],kGridRunRange[1]);
27cdf9c4 635 else taskjetServ->SetRunRange(110000,160000);
636 taskjetServ->SetMCData(kIsMC);
dc6a7461 637 taskjetServ->SetUsePhysicsSelection((Bool_t)iPhysicsSelection);
39e7e8ab 638 taskjetServ->SetPhysicsSelectionFlag(iPhysicsSelectionFlag); //
f4132e7d 639 taskjetServ->SetNonStdFile(kDeltaAODJetName.Data());
640 if(kIsPbPb){
bbb42949 641 if(kDeltaAODJetName.Length()>0&&kFilterAOD)taskjetServ->SetFilterAODCollisions(kTRUE);
642 // else if(iAODanalysis)taskjetServ->SetFilterAODCollisions(kTRUE);
643
d8f21f85 644 taskjetServ->SetZVertexCut(8.);
f4132e7d 645 }
ffab794c 646 if(iAODanalysis){
d8f21f85 647 // taskjetServ->SetDebugLevel(3);
ffab794c 648 taskjetServ->SetAODInput(kTRUE);
649 }
c38e3b95 650 }
651
c38e3b95 652 if(iPWG4JetSpectrum){
653 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetSpectrum2.C");
654 AliAnalysisTaskJetSpectrum2 *taskjetSpectrum = 0;
6bd3fdae 655 if(iPWG4JetSpectrum&1){
f4132e7d 656 if(kIsPbPb){
a31b8a87 657 for(int i = 0;i<5;i++){
658 TString tmp(kDefaultJetBranch.Data());
4478beda 659 // tmp.ReplaceAll(Form(kJetSubtractMask2.Data(),1),kJetSubtractMask1.Data());
660 // tmp.ReplaceAll(Form(kJetSubtractMask2.Data(),1),kJetSubtractMask1.Data());
661 tmp.ReplaceAll(Form(kJetSubtractMask2.Data(),1),Form(kJetSubtractMask1.Data(),0));
a31b8a87 662 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),tmp.Data(),"",kHighPtFilterMask,AliVEvent::kMB,0,kFALSE,0,i);
663 // taskjetSpectrum->SetDebugLevel(3);
664 // taskjetSpectrum->SetMinJetPt(10);
665 taskjetSpectrum->SetTrackEtaWindow(0.8);
666 taskjetSpectrum->SetJetEtaWindow(0.4);
667 if(iAODanalysis)SetAODInput(taskjetSpectrum);
d8f21f85 668
a31b8a87 669
670 // check the old subtracted vs. the new subtracted
671 TString tmp2(kDefaultJetBranch.Data());
4478beda 672 tmp2.ReplaceAll(Form(kJetSubtractMask2.Data(),1),Form(kJetSubtractMask2.Data(),2));
a31b8a87 673 taskjetSpectrum = AddTaskJetSpectrum2(tmp2.Data(),kDefaultJetBranch.Data(),"",kHighPtFilterMask,AliVEvent::kMB,0,kFALSE,0,i);
674 // taskjetSpectrum->SetDebugLevel(3);
675 // taskjetSpectrum->SetMinJetPt(10);
676 taskjetSpectrum->SetTrackEtaWindow(0.8);
677 taskjetSpectrum->SetJetEtaWindow(0.4);
678 if(iAODanalysis)SetAODInput(taskjetSpectrum);
679
4478beda 680 // check the old subtracted vs. the new subtracted
681 TString tmp3(kDefaultJetBranch.Data());
682 tmp3.ReplaceAll(Form(kJetSubtractMask2.Data(),1),Form(kJetSubtractMask2.Data(),3));
a31b8a87 683
4478beda 684 taskjetSpectrum = AddTaskJetSpectrum2(tmp3.Data(),kDefaultJetBranch.Data(),"",kHighPtFilterMask,AliVEvent::kMB,0,kFALSE,0,i);
a31b8a87 685 // taskjetSpectrum->SetDebugLevel(3);
686 // taskjetSpectrum->SetMinJetPt(10);
687 taskjetSpectrum->SetTrackEtaWindow(0.8);
688 taskjetSpectrum->SetJetEtaWindow(0.4);
689 if(iAODanalysis)SetAODInput(taskjetSpectrum);
d8f21f85 690
4478beda 691
692 taskjetSpectrum = AddTaskJetSpectrum2(Form("jetsAOD_UA104_B2_Filter%05d_Cut01000",kHighPtFilterMask),kDefaultJetBranch.Data(),"",kHighPtFilterMask,AliVEvent::kMB,0,kFALSE,0,i);
693 // taskjetSpectrum->SetDebugLevel(3);
694 // taskjetSpectrum->SetMinJetPt(10);
695 taskjetSpectrum->SetTrackEtaWindow(0.8);
696 taskjetSpectrum->SetJetEtaWindow(0.4);
697 if(iAODanalysis)SetAODInput(taskjetSpectrum);
d8f21f85 698
a31b8a87 699 }
f4132e7d 700 }
d8f21f85 701 if (!taskjetSpectrum) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetSpectrum2 cannot run for this train conditions - EXCLUDED");
e6993a52 702 }
d8f21f85 703 }
704
705 if(iPWG4Fragmentation){
706 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskFragmentationFunction.C");
707 AliAnalysisTaskFragmentationFunction *taskFrag = 0;
708 if(kUseAODMC){
709
36c36a0c 710 }
d8f21f85 711 else{
712 taskFrag = AddTaskFragmentationFunction(kDefaultJetBranch.Data(),"","","",kHighPtFilterMask);
713 }
714 if (!taskFrag) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskFragmentationFunction cannot run for this train conditions - EXCLUDED");
715 }
716
717 if(iPWG4JetChem){
718 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetChem.C");
719 AliAnalysisTask *taskChem = AddTaskJetChem(kHighPtFilterMask);
720 if (!taskChem) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetChem cannot run for this train conditions - EXCLUDED");
c38e3b95 721 }
6bd3fdae 722
bbb42949 723 if (iPWG4JetResponse) {
724 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetResponse.C");
725 AliAnalysisTask *taskJetResponse = AddTaskJetResponse("FASTKT", 0.4, kHighPtFilterMask, 0.15, 0);
726 }
6bd3fdae 727
58ef946c 728 if(iPWG4JCORRAN){
729 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJCORRANTask.C");
4721d8c5 730 AliJCORRANTask* corran = AddTaskJCORRAN(kDeltaAODJCORRANName.Data(),0);
58ef946c 731 if(!corran)::Warning("AnalysisTrainPWG4Jets", "AliJCORRANTask cannot run for this train conditions - EXCLUDED");
4721d8c5 732 else{
733 if(kDeltaAODJCORRANName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJCORRANName.Data());
734 }
58ef946c 735 }
736
c38e3b95 737 if(iPWG4UE){
738 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskUE.C");
739 AliAnalysisTaskUE *taskUE = 0;
740 if(iPWG4UE&1)taskUE = AddTaskUE();
741 if(iPWG4UE&2){
94ee88d4 742 taskUE =AddTaskUE("jetsAOD_CDF04","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
17d96675 743 // taskUE =AddTaskUE("jetsAOD_CDF07","CDF", "LJ", "TRANSV","MSP");
94ee88d4 744 taskUE =AddTaskUE("jetsAOD_SISCONE04","CDF", "LJ", "TRANSV","MSP");
17d96675 745 // taskUE =AddTaskUE("jetsAOD_SISCONE07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
94ee88d4 746 taskUE =AddTaskUE("jetsAOD_ICDF","CDF","LJ","TRANSV","MSP");
747 taskUE =AddTaskUE("jetsAOD_FASTKT04","CDF", "LJ", "TRANSV","MSP");
17d96675 748 // taskUE =AddTaskUE("jetsAOD_FASTKT07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
58ef946c 749 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta05", "TRANSV","MSP");
750 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta09", "TRANSV","MSP");
c38e3b95 751 }
2bb1f4ca 752
c38e3b95 753 if (!taskUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskUE cannot run for this train conditions - EXCLUDED");
754 }
e0c120d9 755
756 if(iPWG4LeadingUE){
757 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskLeadingTrackUE.C");
758 AliAnalysisTaskLeadingTrackUE *taskLeadingUE = AddTaskLeadingTrackUE(kUseMC);
759 if (!taskLeadingUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTasLeadingTrackkUE cannot run for this train conditions - EXCLUDED");
27cdf9c4 760 // taskLeadingUE->SetFilterBit(64);
e0c120d9 761 }
762
763
9748e967 764 if(iPWG4CorrectionsUE){
765 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCorrectionsUE.C");
766 AliAnalysisTaskCorrectionsUE *taskCorrectionsUE = 0;
767 if(iPWG4CorrectionsUE&1)taskCorrectionsUE = AddTaskCorrectionsUE("jetsAOD_NONE","CDF","MP_eta05","TRANSV","MSP",kFALSE);
768 if (!taskCorrectionsUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCorrectionsUE cannot run for this train conditions - EXCLUDED");
769 }
c38e3b95 770
771 if(iPWG4ThreeJets){
772 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskThreeJets.C");
773 AliAnalysisTaskThreeJets *taskThree = AddTaskThreeJets();
774 if(!taskThree)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskThreets cannot run for this train conditions - EXCLUDED");
775 }
cc636095 776 if(iPWG4QGSep){
777 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskQGSep.C");
778 AliAnalysisTaskQGSep *taskQGSep = AddTaskQGSep(kUseMC,iAODanalysis);
779 if(!taskQGSep)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQGSep cannot run for this train conditions - EXCLUDED");
780 }
781
782
783 if(iPWG4Minijet){
784 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskMinijet.C");
4d16db9c 785 AliAnalysisTaskMinijet *taskMini = AddTaskMinijet(-1,"esd",kUseMC,kGridDataSet);
cc636095 786 // if we ha highmult trigger add another task
787 if(!taskMini)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskMinjet cannot run for this train conditions - EXCLUDED");
788 }
789
790
c38e3b95 791 if(iPWG4PtQAMC){
792 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQAMC.C");
f87effcf 793 AliPWG4HighPtQAMC *taskQAMC = 0;
794 if(kUseMC){
36c36a0c 795 if(iPWG4PtQAMC&1){
796 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),0);
797 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),1);
798 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),2);
799 }
f87effcf 800 }
c38e3b95 801 if (!taskQAMC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQAMC cannot run for this train conditions - EXCLUDED");
802 }
803
804 if(iPWG4PtQATPC){
805 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQATPConly.C");
10295ac3 806 AliPWG4HighPtQATPConly *taskQATPC = 0;
b1cd0099 807 if(iPWG4PtQATPC&1)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),1);
808 if(iPWG4PtQATPC&2)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),2);
10295ac3 809
810 if (!taskQATPC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQATPC cannot run for this train conditions - EXCLUDED");
c38e3b95 811 }
3878a941 812
1f329128 813 if(iPWG4Cosmics){
814 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4CosmicCandidates.C");
815
816 AliPWG4CosmicCandidates *taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(0);
817 taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(1);
818
819 if (!taskPWG4CosmicCandidates) ::Warning("AnalysisTrainPWG4Jets", "AddTaskPWG4CosmicCandidates cannot run for this train conditions - EXCLUDED");
820 }
821
822
c38e3b95 823 if(iPWG4PtSpectra){
824 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtSpectra.C");
b1cd0099 825 AliPWG4HighPtSpectra *taskPtSpectra = AddTaskPWG4HighPtSpectra(kGridDataSet.Data());
c38e3b95 826 if (!taskPtSpectra) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskPtSpectra cannot run for this train conditions - EXCLUDED");
827 }
b53f2e4f 828 if(iPWG4KMeans){
829 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskKMeans.C");
830 AliAnalysisTaskKMeans *taskKMeans = AddTaskKMeans();
831 if (!taskKMeans) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskKMenans cannot run for this train conditions - EXCLUDED");
832 }
833
c38e3b95 834 if(iPWG4PartCorr){
835 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPartCorr.C");
14526afb 836 AliAnalysisTaskParticleCorrelation *taskpartcorrPHOS = AddTaskPartCorr("AOD", "PHOS",kFALSE,kIsMC);
c38e3b95 837 if (!taskpartcorrPHOS) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation PHOS cannot run for this train conditions - EXCLUDED");
14526afb 838 AliAnalysisTaskParticleCorrelation *taskpartcorrEMCAL = AddTaskPartCorr("AOD", "EMCAL",kFALSE,kIsMC);
c38e3b95 839 if (!taskpartcorrEMCAL) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation EMCAL cannot run for this train conditions - EXCLUDED");
4721d8c5 840 if(kDeltaAODPartCorrName.Length()>0)mgr->RegisterExtraFile(kDeltaAODPartCorrName.Data());
121e4bd5 841 }
842
d2e6cdd5 843 if(iPWG4CaloQA){
844 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/QA/AddTaskCalorimeterQA.C");
9748e967 845 AliAnalysisTaskParticleCorrelation *taskcaloQA = AddTaskCalorimeterQA("ESD",kFALSE,kIsMC,kCaloQAOutputFileName.Data());
d2e6cdd5 846 if(!taskcaloQA)::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation QA cannot run - EXCLUDED");
aba42fcb 847 // if(kCaloQAOutputFileName.Length()>0)mgr->RegisterExtraFile(kCaloQAOutputFileName.Data());
d2e6cdd5 848 }
849
d2e6cdd5 850 if(iPWG4JetCorr){
851 // using namespace JetCorrelHD;
d3af0232 852 TString cdir = gSystem->WorkingDirectory();
853 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
d2e6cdd5 854 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCorrel.C");
855 AliAnalysisTaskJetCorrel *taskjetcorr = AddTaskJetCorrel();
d3af0232 856 gSystem->ChangeDirectory(cdir);
c166d299 857 if (!taskjetcorr) ::Warning("AnalysisTrainNew", "AliAnalysisTaskJetCorrel cannot run for this train conditions - EXCLUDED");
d2e6cdd5 858 }
859
911a740f 860 if(iPWG4Tagged){
861 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskTaggedPhotons.C");
862 AliAnalysisTaskTaggedPhotons * taskTagged = AddTaskTaggedPhotons(kFALSE); // EMCAL
58ef946c 863 taskTagged = AddTaskTaggedPhotons(kTRUE); // PHOS
911a740f 864 if (!taskTagged) ::Warning("AnalysisTrainNew", "AliAnalysisTaskTaggedPhotons cannot run for this train conditions - EXCLUDED");
865 }
121e4bd5 866 if (iPWG4omega3pi) {
867 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskomega3pi.C");
868 AliAnalysisTaskOmegaPi0PiPi *taskomega3pi = AddTaskomega3pi();
869 if (!taskomega3pi) ::Warning("AnalysisTrainNew", "AliAnalysisTaskomega3pi cannot run\
870 for these train conditions - EXCLUDED");
871 }
872
53c63663 873 // PWG4 gamma conversion analysis
874 if (iPWG4GammaConv) {
875 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskGammaConversion.C");
876 TString cdir = gSystem->WorkingDirectory();
877 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
878 // TString gcArguments = "-run-on-train -run-jet -run-chic -run-neutralmeson -run-cf";
58ef946c 879 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
880 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
b0a36f28 881 TString gcArguments = "-run-on-train -run-jet -run-omega-meson -use-own-xyz -run-neutralmeson -no-aod";
27cdf9c4 882 // TString kGCAnalysisCutSelectionId="9003562000100310";
cfd02305 883 // TString kGCAnalysisCutSelectionId="9003562000100312";
884 // gcArguments.Append(Form(" -set-cut-selection %s ",kGCAnalysisCutSelectionId.Data()));
53c63663 885 if(!kIsMC)gcArguments += " -mc-off";
886 AliAnalysisTaskGammaConversion * taskGammaConversion = AddTaskGammaConversion(gcArguments,mgr->GetCommonInputContainer());
887 gSystem->ChangeDirectory(cdir);
121e4bd5 888 taskGammaConversion->SelectCollisionCandidates();
53c63663 889 if (!taskGammaConversion) ::Warning("AnalysisTrainNew", "AliAnalysisTaskGammaConversion cannot run for these train conditions - EXCLUDED");
890 }
891
17d96675 892 if (iPWG4CaloConv) {
893 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCaloConv.C");
894 AliAnalysisTaskCaloConv * taskCaloConv = AddTaskCaloConv();
895 if (!taskCaloConv) ::Warning("AnalysisTrainNew", "AliAnalysisTaskCaloConv cannot run for these train conditions - EXCLUDED");
896 }
897
898
3878a941 899
c38e3b95 900 //==========================================================================
901 // FOR THE REST OF THE TASKS THE MACRO AddTaskXXX() is not yet implemented/
902 // Run the analysis
903 //
904 if (kPluginUse) {
905 AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
906 AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
907 }
908
909 if (mgr->InitAnalysis()) {
910 mgr->PrintStatus();
911 // if (kSaveTrain || strlen(config_file)) gSystem->ChangeDirectory(kTrainName);
e84da0a5 912 if (!strcmp(plugin_mode,"submit")&&smode=="GRID"){
c38e3b95 913 TString alien_workdir = gGrid->GetHomeDirectory();
914 if (iAODanalysis) alien_workdir += "analysisAOD";
915 else alien_workdir += "analysisESD";
3878a941 916 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
c38e3b95 917 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
e84da0a5 918 printf("=== AnalysisTrainPWG4Jets:: Registering jdl in the work directory alien://%s/%s, should be done by the manager! ===\n",
c38e3b95 919 alien_workdir.Data(),gridhandler->GetGridOutputDir());
58ef946c 920
921 TString dest;
922 dest = Form("%s/%s/%s.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
923 if(AliAnalysisAlien::FileExists(dest.Data())){
bbb42949 924 Printf("%s exist on grid removing...",dest.Data());
925 gGrid->Rm(dest.Data());
58ef946c 926 }
bbb42949 927 Printf("%s copy ...",dest.Data());
58ef946c 928 TFile::Cp(Form("file:%s.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
4721d8c5 929
930
931 TString dest;
932 dest = Form("%s/%s/%s_merge.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
933 if(AliAnalysisAlien::FileExists(dest.Data())){
bbb42949 934 Printf("%s exist on grid removing...",dest.Data());
935 gGrid->Rm(dest.Data());
4721d8c5 936 }
bbb42949 937 Printf("%s copy ...",dest.Data());
4721d8c5 938 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
939
bbb42949 940 dest = Form("%s/%s/%s_merge_final.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
941 if(AliAnalysisAlien::FileExists(dest.Data())){
942 Printf("%s exist on grid removing...",dest.Data());
943 gGrid->Rm(dest.Data());
944 }
945 Printf("%s copy ...",dest.Data());
946 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
947
948
949 /*
73b7619a 950 dest = Form("%s/rootfiles/STEER/LQ1dRef_v1.root",gGrid->GetHomeDirectory());
58ef946c 951 if(AliAnalysisAlien::FileExists(dest.Data())){
952 Printf("%s exist on grid removing...",dest.Data());
953 gGrid->Rm(dest.Data());
954 }
955 TFile::Cp(Form("file:%s/STEER/LQ1dRef_v1.root",
9748e967 956 gSystem->ExpandPathName("$ALICE_ROOT")),Form("alien://%s",dest.Data()));
bbb42949 957 */
c38e3b95 958 }
3878a941 959 AliLog::SetGlobalLogLevel(AliLog::kError);
c166d299 960 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
961 TFile * fM = TFile::Open("manager_local.root","RECREATE");
962 mgr->Write();
963 fM->Close();
964 }
46534866 965
966 // grmpf, aliroot error handler overwrites root
967 gErrorIgnoreLevel = kErrorIgnoreLevel;
968 if(gErrorIgnoreLevel>3000) AliLog::SetGlobalLogLevel(AliLog::kFatal);
c38e3b95 969 StartAnalysis(smode, chain);
4a6f59cb 970 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
971 for(int i = 0;i < mgr->GetTopTasks()->GetEntries();i++){
972 mgr->ProfileTask(i);
973 }
974 }
c38e3b95 975 if (!strcmp(plugin_mode, "offline")&&smode=="GRID"){
e84da0a5 976 // Offline mode path files
977 // PatchJDL();
d8f21f85 978 // PatchAnalysisMacro();
e84da0a5 979 }
c38e3b95 980
e84da0a5 981 if (kSaveTrain && smode=="GRID") {
982 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
983 TString alien_workdir = gGrid->GetHomeDirectory();
984 if (iAODanalysis) alien_workdir += "analysisAOD";
3878a941 985 else alien_workdir += "analysisESD";
986 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
e84da0a5 987 // kGridOutdir = gridhandler->GetGridOutputDir();
988 printf("=== Registering ConfigTrain.C in the work directory <%s> ===\n",
c38e3b95 989 alien_workdir.Data());
e84da0a5 990 if (AliAnalysisAlien::FileExists(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data())))
991 gGrid->Rm(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
992 if (strcmp(plugin_mode, "test"))
993 TFile::Cp(Form("file:%sConfig.C",kTrainName.Data()), Form("alien://%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
994 }
995 }
c38e3b95 996}
997
998//______________________________________________________________________________
999void StartAnalysis(const char *mode, TChain *chain) {
1000// Start analysis.
1001 Int_t imode = -1;
1002 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1003 if (!strcmp(mode, "LOCAL")) imode = 0;
1004 if (!strcmp(mode, "PROOF")) imode = 1;
1005 if (!strcmp(mode, "GRID")) imode = 2;
1006 switch (imode) {
1007 case 0:
1008 if (!chain) {
1009 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
1010 return;
1011 }
82ebd295 1012 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
c38e3b95 1013 return;
1014 case 1:
1015 if (!kProofDataSet.Length()) {
1016 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "kProofDataSet is empty");
1017 return;
1018 }
1019 mgr->StartAnalysis(mode, kProofDataSet, kProofEvents,kProofOffset);
1020 return;
1021 case 2:
1022 if (kPluginUse) {
1023 if (!mgr->GetGridHandler()) {
1024 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Grid plugin not initialized");
1025 return;
1026 }
ebad39a9 1027 mgr->StartAnalysis("grid",chain,kNumberOfEvents);
c38e3b95 1028 } else {
1029 if (!chain) {
1030 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
1031 return;
1032 }
1033 mgr->StartAnalysis(mode, chain);
ebad39a9 1034 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
c38e3b95 1035 }
1036 return;
1037 }
1038}
1039
1040//______________________________________________________________________________
1041void CheckModuleFlags(const char *mode) {
1042// Checks selected modules and insure compatibility
1043 Int_t imode = -1;
1044 if (!strcmp(mode, "LOCAL")) imode = 0;
1045 if (!strcmp(mode, "PROOF")) imode = 1;
1046 if (!strcmp(mode, "GRID")) imode = 2;
1047
1048
e84da0a5 1049 if (kUseCPAR) {
1050 kPluginAliRootVersion = ""; // NO aliroot if we use CPAR
1051 }
c38e3b95 1052
1053 if (imode==1) {
1054 if (!kUsePAR) {
1055 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PAR files enabled due to PROOF analysis");
1056 kUsePAR = kTRUE;
1057 }
1058 }
1059 if (imode != 2) {
1060 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AliEn plugin disabled since not in GRID mode");
1061 kPluginUse = kFALSE;
1062 }
1063
1064
1065 if(!kIsMC){
1066 // switch off anthin related to MC
1067 kUseMC = 0;
1068 kUseAODMC = 0;
1069 kUseTR = kFALSE;
1070 }
1071
f4132e7d 1072 // Decide if we have PbPb
1c79997e 1073 if(kGridDataSet.CompareTo("LHC10h")==0||kGridDataSet.Contains("LHC10h")) {
1074 Printf("Using settings for Pb+Pb");
f4132e7d 1075 kIsPbPb = true;
1076 }
1077
1078
1079
c38e3b95 1080 if (iAODanalysis) {
1081 // AOD analysis
1082 if (kUseMC)
1083 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "MC usage disabled in analysis on AOD's");
1084 if (kUseAODTags)
1085 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AOD tags usage disabled in analysis on AOD's");
1086 kUseMC = kFALSE;
1087 kUseTR = kFALSE;
1088 kUseAODTags = kFALSE;
1089 if (iESDfilter)
1090 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "ESD filter disabled in analysis on AOD's");
1091 iESDfilter = 0;
e84da0a5 1092 if (iPhysicsSelection)
1093 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "Physics Selection disabled in analysis on AOD's");
1094 iPhysicsSelection = 0;
c38e3b95 1095 if (!iAODhandler) {
1096 if (iJETAN)
1097 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "JETAN disabled in analysis on AOD's without AOD handler");
1098 iJETAN = 0;
1099 iDIJETAN = 0;
1100 }
1101 // Disable tasks that do not work yet on AOD data
58ef946c 1102 if(iPWG4JCORRAN)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 JCORRAN disabled in analysis on AOD's");
4d62ae1a 1103 iPWG4JCORRAN = 0;
c38e3b95 1104 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
1105 iPWG4PtQAMC = 0;
1106 if( iPWG4PtQATPC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtTPC disabled in analysis on AOD's");
1107 iPWG4PtQATPC = 0;
1f329128 1108 if( iPWG4Cosmics)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Comics disabled in analysis on AOD's");
1109 iPWG4Cosmics = 0;
1110
c38e3b95 1111 if( iPWG4PtSpectra)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
1112 iPWG4PtSpectra = 0;
b53f2e4f 1113 if(iPWG4KMeans)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4KMeans disabled on AOD's");
1114 iPWG4KMeans = 0;
d2e6cdd5 1115 if (iPWG4JetCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4Jetcorr disabled on AOD's");
1116 iPWG4JetCorr = 0;
c38e3b95 1117 if (iPWG4PartCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4partcorr disabled on AOD's");
1118 iPWG4PartCorr = 0;
d2e6cdd5 1119 if (iPWG4CaloQA)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4CaloQA disabled on AOD's");
1120 iPWG4CaloQA = 0;
911a740f 1121 if (iPWG4Tagged)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4tagged disabled on AOD's");
1122 iPWG4Tagged = 0;
121e4bd5 1123 if (iPWG4omega3pi)
1124 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG4omega3pi disabled on AOD's");
1125 iPWG4omega3pi = 0;
c38e3b95 1126 if(iPWG1QASym)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG1 QA Sym disabled in analysis on AOD's");
53c63663 1127 if (iPWG4GammaConv)::Info("AnalysisPWG4Jets.C::CheckModuleFlags", "PWG4gammaconv disabled on AOD's");
1128 iPWG4GammaConv = 0;
c38e3b95 1129 iPWG1QASym = 0;
f4132e7d 1130 iCentralitySelection = 0;
c38e3b95 1131 } else {
1132 // ESD analysis
f4132e7d 1133
1134 if(kIsPbPb){
1135 iCentralitySelection = 1;
1136 }
1137
c38e3b95 1138 if (!kUseMC){
1139 kUseTR = kFALSE;
1140
1141 if(kUseKinefilter)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Kine Filter disabled in analysis without MC");
1142 kUseKinefilter = kFALSE;
1143 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis without MC");
1144 iPWG4PtQAMC = 0;
9748e967 1145 if( iPWG4CorrectionsUE)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 CorrectionsUE disabled in analysis without MC");
1146 iPWG4CorrectionsUE = 0;
c38e3b95 1147 }
1148 if (!kUseTR) {
c166d299 1149 if(iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "iPWG4QATPCMC disabled if not reading track references");
b03b08a3 1150 iPWG4PtQAMC = 0;
c38e3b95 1151 }
e84da0a5 1152 if (iJETAN){
1153 iESDfilter=1;
1154 }
c38e3b95 1155 if (!iESDfilter){
1156 kUseKinefilter = kFALSE;
1157 kUseMuonfilter = kFALSE;
1158 }
1159 if(!iJETAN){
cc636095 1160 iPWG4JetSpectrum = iPWG4UE = iPWG4CorrectionsUE = iPWG4ThreeJets = iPWG4QGSep = iDIJETAN = 0;
c38e3b95 1161 }
1162 }
cc636095 1163 iPWG4JetTasks = iPWG4JetServices||iPWG4JetSpectrum||iPWG4UE||iPWG4LeadingUE||iPWG4PtQAMC||iPWG4PtSpectra||iPWG4PtQATPC||iPWG4Cosmics||iPWG4ThreeJets||iPWG4QGSep||iPWG4JetChem||iPWG4Minijet||iPWG4Fragmentation;
d2e6cdd5 1164 iPWG4PartCorrLibs = iPWG4PartCorr||iPWG4Tagged||iPWG4CaloQA;
17d96675 1165 iPWG4GammaConvLib = iPWG4GammaConv||iPWG4CaloConv;
1166
1167
1168 iEMCUtilLibs = iPWG4PartCorrLibs||iPWG4JCORRAN||iPWG4GammaConvLib;
e6993a52 1169 iJETANLib = iPWG4JetTasks||iJETAN||iDIJETAN;
17d96675 1170
c38e3b95 1171 if (iESDfilter) {iAODhandler=1;}
1172 if (kUseKinefilter && !kUseMC) kUseKinefilter = kFALSE;
1173 if (kUseAODTags && !iAODhandler) kUseAODTags = kFALSE;
1174
1175
1176
1177}
1178
1179//______________________________________________________________________________
1180Bool_t Connect(const char *mode) {
1181// Connect <username> to the back-end system.
1182 Int_t imode = -1;
1183 if (!strcmp(mode, "LOCAL")) imode = 0;
1184 if (!strcmp(mode, "PROOF")) imode = 1;
1185 if (!strcmp(mode, "GRID")) imode = 2;
1186 TString username = gSystem->Getenv("alien_API_USER");
1187 switch (imode) {
1188 case 0:
1189 break;
1190 case 1:
1191 if (!username.Length()) {
1192 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1193 1. Have called: alien-token-init <username>\n \
1194 2. Have called: >source /tmp/gclient_env_$UID");
1195 return kFALSE;
1196 }
1197 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to PROOF cluster <%s>",
1198 username.Data(), kProofCluster.Data());
1199 gEnv->SetValue("XSec.GSI.DelegProxy", "2");
1200// TProof::Open(Form("%s@%s:31093", username.Data(), kProofCluster.Data()));
1201 TProof::Open(Form("%s@%s", username.Data(), kProofCluster.Data()));
1202 if (!gProof) {
1203 if (strcmp(gSystem->Getenv("XrdSecGSISRVNAMES"), "lxfsrd0506.cern.ch"))
1204 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Environment XrdSecGSISRVNAMES different from lxfsrd0506.cern.ch");
1205 return kFALSE;
1206 }
1207 if(kProofClearPackages)gProof->ClearPackages();
1208
1209 if(kProofSaveToAlien){
1210 TGrid::Connect("alien://");
1211 if (gGrid) {
1212 TString homedir = gGrid->GetHomeDirectory();
1213 TString workdir = homedir + kTrainName;
1214 if (!gGrid->Cd(workdir)) {
1215 gGrid->Cd(homedir);
1216 if (gGrid->Mkdir(workdir)) {
1217 gGrid->Cd(kTrainName);
1218 ::Info("AnalysisTrainPWG4Jets::Connect()", "Directory %s created", gGrid->Pwd());
1219 }
1220 }
1221 gGrid->Mkdir("proof_output");
1222 gGrid->Cd("proof_output");
1223 kProofOutdir = Form("alien://%s", gGrid->Pwd());
1224 }
1225 }
1226 break;
1227 case 2:
1228 if (!username.Length()) {
1229 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1230 1. Have called: alien-token-init <username>\n \
1231 2. Have called: >source /tmp/gclient_env_$UID");
1232 return kFALSE;
1233 }
1234 if (kPluginUse && !gSystem->Getenv("alien_CLOSE_SE")) {
1235 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode),
1236 "When using the AliEn plugin it is preferable to define the \
1237 variable alien_CLOSE_SE in your environment.");
1238 return kFALSE;
1239 }
1240 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to AliEn ...",
1241 username.Data());
1242 TGrid::Connect("alien://");
1243 if (!gGrid || !gGrid->IsConnected()) return kFALSE;
1244 break;
1245 default:
1246 ::Error("AnalysisTrainPWG4Jets.C::Connect", "Unknown run mode: %s", mode);
1247 return kFALSE;
1248 }
1249 ::Info("AnalysisTrainPWG4Jets.C::Connect","Connected in %s mode", mode);
1250 return kTRUE;
1251}
1252
1253//______________________________________________________________________________
1254Bool_t LoadCommonLibraries(const char *mode)
1255{
1256// Load common analysis libraries.
1257 Int_t imode = -1;
1258 if (!strcmp(mode, "LOCAL")) imode = 0;
1259 if (!strcmp(mode, "PROOF")) imode = 1;
1260 if (!strcmp(mode, "GRID")) imode = 2;
1261 if (!gSystem->Getenv("ALICE_ROOT")) {
ebad39a9 1262 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Analysis train requires that ALICE_ROOT is set to pick up Configurations");
c38e3b95 1263 return kFALSE;
1264 }
1265 Bool_t success = kTRUE;
1266 // ROOT libraries
1267 gSystem->Load("libTree.so");
1268 gSystem->Load("libGeom.so");
1269 gSystem->Load("libVMC.so");
1270 gSystem->Load("libPhysics.so");
1271
1272 // Load framework classes. Par option ignored here.
1273 switch (imode) {
1274 case 0:
1275 case 2:
1276 if (kUseCPAR) {
1277 success &= LoadLibrary("STEERBase", mode, kTRUE);
1278 success &= LoadLibrary("ESD", mode, kTRUE);
1279 success &= LoadLibrary("AOD", mode, kTRUE);
1280 success &= LoadLibrary("ANALYSIS", mode, kTRUE);
1281 success &= LoadLibrary("ANALYSISalice", mode, kTRUE);
d8f21f85 1282 success &= LoadLibrary("ROOTFILES", mode, kTRUE);
bbb42949 1283 // success &= LoadLibrary("EventMixing", mode,kTRUE);
c38e3b95 1284 success &= LoadLibrary("CORRFW", mode, kTRUE);
1285 } else {
1286 success &= LoadLibrary("libSTEERBase.so", mode);
1287 success &= LoadLibrary("libESD.so", mode);
1288 success &= LoadLibrary("libAOD.so", mode);
1289 success &= LoadLibrary("libANALYSIS.so", mode);
1290 success &= LoadLibrary("libANALYSISalice.so", mode);
bbb42949 1291 // success &= LoadLibrary("libEventMixing.so", mode);
c38e3b95 1292 success &= LoadLibrary("libCORRFW.so", mode);
1293 gROOT->ProcessLine(".include $ALICE_ROOT/include");
1294 }
1295 break;
1296 case 1:
1297 Int_t ires = -1;
1298 if (kProofUseAFPAR && !gSystem->AccessPathName(kProofAFversion)) ires = gProof->UploadPackage(kProofAFversion);
1299 if (ires < 0) {
1300 success &= LoadLibrary("STEERBase", mode);
1301 success &= LoadLibrary("ESD", mode);
1302 success &= LoadLibrary("AOD", mode);
1303 success &= LoadLibrary("ANALYSIS", mode);
1304 success &= LoadLibrary("ANALYSISalice", mode);
070f06d2 1305 success &= LoadLibrary("EventMixing", mode);
c38e3b95 1306 success &= LoadLibrary("CORRFW", mode);
1307 } else {
1308 ires = gProof->EnablePackage(kProofAFversion);
1309 if (ires<0) success = kFALSE;
1310 success &= LoadLibrary("CORRFW", mode);
1311 }
1312 break;
1313 default:
1314 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Unknown run mode: %s", mode);
1315 return kFALSE;
1316 }
1317 if (success) {
1318 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: SUCCESS");
1319 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Include path for Aclic compilation:\n%s",
1320 gSystem->GetIncludePath());
1321 } else {
1322 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: FAILED");
1323 }
1324
1325 return success;
1326}
1327
1328//______________________________________________________________________________
1329Bool_t LoadAnalysisLibraries(const char *mode)
1330{
1331// Load common analysis libraries.
9748e967 1332 Bool_t success = kTRUE;
cfd02305 1333 if (useTender) {
1334 if (!LoadLibrary("TENDER", mode, kTRUE) ||
1335 !LoadLibrary("TENDERSupplies", mode, kTRUE)) return kFALSE;
1336 }
c38e3b95 1337 if (iESDfilter) {
b0a36f28 1338 /*
c38e3b95 1339 if (!LoadLibrary("PWG3base", mode, kTRUE) ||
1340 !LoadLibrary("PWG3muon", mode, kTRUE)) return kFALSE;
b0a36f28 1341 */
c38e3b95 1342 }
1343 // JETAN
e6993a52 1344 if (iJETANLib) {
b53f2e4f 1345 // this part needs some rework in case we do not need the fastjed finders for processing
1346 if (!LoadLibrary("JETAN", mode, kTRUE)) return kFALSE;
c38e3b95 1347 if (!strcmp(mode, "PROOF")){
ef1e462f 1348 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libCGAL.so\"\)", kTRUE);
c38e3b95 1349 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libfastjet.so\"\)", kTRUE);
1350 // problem when loading siscone copiled with different gcc version??
1351 // gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libsiscone.so\"\)", kTRUE);
1352 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libSISConePlugin.so\"\)", kTRUE);
1353 }
b53f2e4f 1354 if(!kUsePAR){
e84da0a5 1355 if (!LoadLibrary("CGAL", mode, kTRUE)) return kFALSE;
1356 if (!LoadLibrary("fastjet", mode, kTRUE)) return kFALSE;
1357 if (!LoadLibrary("siscone", mode, kTRUE)) return kFALSE;
1358 if (!LoadLibrary("SISConePlugin", mode, kTRUE)) return kFALSE;
1359 }
1360 else{
1361 // par files plus FASTJET needs some extra work... need to change
1362 // the loading sequence in the auto generated .C file
1363 if (!LoadLibrary("libCGAL.so", mode, kTRUE)) return kFALSE;
1364 if (!LoadLibrary("libfastjet.so", mode, kTRUE)) return kFALSE;
1365 if (!LoadLibrary("libsiscone.so", mode, kTRUE)) return kFALSE;
1366 if (!LoadLibrary("libSISConePlugin.so", mode, kTRUE)) return kFALSE;
1367 }
c38e3b95 1368 if (!LoadLibrary("FASTJETAN", mode, kTRUE)) return kFALSE;
1369 }
1370 if(iPWG4JetTasks){
c38e3b95 1371 if (!LoadLibrary("PWG4JetTasks", mode, kTRUE)) return kFALSE;
1372 }
58ef946c 1373
c38e3b95 1374 if(iPWG1QASym){
99bfd7f7 1375 if (!LoadSource(Form("%s/PWG1/AliAnalysisTaskQASym.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
c38e3b95 1376 }
121e4bd5 1377 if(iPWG4TmpSourceSara){
c166d299 1378 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
121e4bd5 1379 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskEta.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1380 }
58ef946c 1381
9f77f0ce 1382 /*
1383 if(iPWG4JetChem){
c580ebbb 1384 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
1385 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskJetChem.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1386 }
9f77f0ce 1387 */
c166d299 1388
4721d8c5 1389 if(iEMCUtilLibs){
1390 if (!LoadLibrary("EMCALUtils", mode, kTRUE) ||
1391 !LoadLibrary("PHOSUtils", mode, kTRUE)) return kFALSE;
1392 }
1393
911a740f 1394 if (iPWG4PartCorrLibs) {
4721d8c5 1395 if (!LoadLibrary("PWG4PartCorrBase", mode, kTRUE) ||
c38e3b95 1396 !LoadLibrary("PWG4PartCorrDep", mode, kTRUE)) return kFALSE;
1397 }
4721d8c5 1398 if(iPWG4JCORRAN){
1399 // PWG4 particle correlations
1400 if(!LoadLibrary("PWG4JCORRAN",mode,kTRUE))return kFALSE;
1401 }
d2e6cdd5 1402 if (iPWG4JetCorr) {
1403 if (!LoadLibrary("PWG4JetCorrel", mode, kTRUE)) return kFALSE;
1404 }
121e4bd5 1405 if (iPWG4omega3pi) {
1406 if (!LoadLibrary("PWG4omega3pi", mode, kTRUE)) return kFALSE;
1407 }
17d96675 1408 if (iPWG4GammaConvLib) {
53c63663 1409 if (!LoadLibrary("PWG4GammaConv", mode, kTRUE)) return kFALSE;
1410 }
c38e3b95 1411
1412 ::Info("AnalysisTrainPWG4Jets.C::LoadAnalysisLibraries", "Load other libraries: SUCCESS");
1413 return kTRUE;
1414}
1415
1416//______________________________________________________________________________
1417Bool_t LoadLibrary(const char *module, const char *mode, Bool_t rec=kFALSE)
1418{
1419// Load a module library in a given mode. Reports success.
1420 Int_t imode = -1;
1421 Int_t result;
1422 TString smodule(module);
1423 if (!strcmp(mode, "LOCAL")) imode = 0;
1424 if (!strcmp(mode, "PROOF")) imode = 1;
1425 if (!strcmp(mode, "GRID")) imode = 2;
1426 TString mod(module);
1427 if (!mod.Length()) {
1428 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Empty module name");
1429 return kFALSE;
1430 }
1431 // If a library is specified, just load it
1432 if (smodule.EndsWith(".so")) {
1433 mod.Remove(mod.Index(".so"));
1434 result = gSystem->Load(mod);
1435 if (result < 0) {
1436 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load library %s", module);
1437 return kFALSE;
1438 }
1439 if (rec) anaLibs += Form("%s.so ",mod.Data());
e84da0a5 1440 if (rec) anaLibsExtra += Form("%s.so ",mod.Data());
c38e3b95 1441 return kTRUE;
1442 }
1443 // Check if the library is already loaded
1444 if (strlen(gSystem->GetLibraries(Form("%s.so", module), "", kFALSE)) > 0)
1445 return kTRUE;
1446 switch (imode) {
1447 case 0:
1448 case 2:
1449 if (kUsePAR) {
1450 result = SetupPar(module);
1451 if (rec) anaPars += Form("%s.par ", module);
1452 } else {
1453 result = gSystem->Load(Form("lib%s.so", module));
1454 if (rec) anaLibs += Form("lib%s.so ", module);
1455 }
1456 break;
1457 case 1:
1458 if(!gSystem->AccessPathName(module)){
1459 ::Info("AnalysisTrainPWG4Jets.C::LoadLibrary", "Removing directory %s",module);
1460 gSystem->Exec(Form("rm -rf %s",module));
1461 }
1462 result = gProof->UploadPackage(module);
1463 if (result<0) {
1464 result = gProof->UploadPackage(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", module)));
1465 if (result<0) {
1466 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not find module %s.par in current directory nor in $ALICE_ROOT", module);
1467 return kFALSE;
1468 }
1469 }
1470 result = gProof->EnablePackage(module);
1471 break;
1472 default:
1473 return kFALSE;
1474 }
1475 if (result < 0) {
1476 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load module %s", module);
1477 return kFALSE;
1478 }
1479 return kTRUE;
1480}
1481
1482
1483
1484//______________________________________________________________________________
1485Bool_t LoadSource(const char *source, const char *mode, Bool_t rec=kFALSE)
1486{
1487// Load a module library in a given mode. Reports success.
1488 Int_t imode = -1;
1489 Int_t result = -1;
1490 if (!strcmp(mode, "LOCAL")) imode = 0;
1491 if (!strcmp(mode, "PROOF")) imode = 1;
1492 if (!strcmp(mode, "GRID")) imode = 2;
1493 TString ssource(source);
1494 TString basename = gSystem->BaseName(ssource.Data());
1495 if (!ssource.Length()) {
1496 ::Error("AnalysisTrainPWG4Jets.C::LoadSource", "Empty task name");
1497 return kFALSE;
1498 }
4d62ae1a 1499 // we have a source code so compile it
c38e3b95 1500 if (ssource.EndsWith(".cxx")) {
1501 // need to copy it here other wise the path is also used on grid...
1502 ssource.Remove(ssource.Index(".cxx"));
1503 basename.Remove(basename.Index(".cxx"));
1504 Printf("LoadSources:: Copying... path %s{cxx,h}",ssource.Data());
1505 gSystem->Exec(Form("cp %s.cxx . ",ssource.Data()));
1506 gSystem->Exec(Form("cp %s.h . ",ssource.Data()));
1507 // Path to code
1508 // only needed for local compilation, in grid and proof mode
1509 // the task headers are uploaded
1510 // path.Remove(path.Index(gSystem->BaseName(path.Data())));
1511 // Printf("LoadSources:: Including path %s",path.Data());
1512 // if(path.Length()>0)gROOT->ProcessLine(Form(".include %s",path.Data()));
1513 Printf("LoadSources:: Loading... path %s",basename.Data());
1514 switch (imode) {
1515 case 0:
b53f2e4f 1516 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1517 break;
1518 case 1:
b53f2e4f 1519 result = gProof->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1520 break;
1521 case 2:
b53f2e4f 1522 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1523 if (rec){
1524 // what we want to compile
1525 anaSources += Form("%s.cxx ",basename.Data());
1526 // what we need as input...
1527 anaLibs += Form("%s.cxx %s.h ",basename.Data(),basename.Data());
1528 }
1529 break;
1530 default:
1531 return kFALSE;
1532 }
1533 }
1534 if (result < 0) {
1535 ::Error("AnalysisTrainPWG4Jets.C::LoadSources", "Could not load source %s", source);
1536 return kFALSE;
1537 }
1538 return kTRUE;
1539}
1540
1541
1542//______________________________________________________________________________
1543TChain *CreateChain(const char *mode, const char *plugin_mode)
1544{
1545// Create the input chain
1546 Int_t imode = -1;
1547 if (!strcmp(mode, "LOCAL")) imode = 0;
1548 if (!strcmp(mode, "PROOF")) imode = 1;
1549 if (!strcmp(mode, "GRID")) imode = 2;
1550 TChain *chain = NULL;
1551 // Local chain
1552 switch (imode) {
1553 case 0:
1554 if (iAODanalysis) {
1555 if (!kLocalXMLDataset.Length()) {
1556 // Local AOD
1557 chain = new TChain("aodTree");
1558 TString line;
1559 ifstream in;
1560 in.open(kLocalDataList.Data());
1561 while (in.good()) {
1562 in >> line;
1563 if (line.Length() == 0) continue;
1564 // cout << " line = " << line << endl;
1565 chain->Add(line.Data());
1566 }
1567 } else {
1568 // Interactive AOD
1569 chain = CreateChainSingle(kLocalXMLDataset, "aodTree");
1570 }
1571 } else {
1572 if (!kLocalXMLDataset.Length()) {
1573 // Local ESD
1574 chain = new TChain("esdTree");
1575 TString line;
1576 ifstream in;
1577 in.open(kLocalDataList.Data());
1578 while (in.good()) {
1579 in >> line;
1580 if (line.Length() == 0) continue;
1581 cout << " line = " << line << endl;
1582 chain->Add(line.Data());
1583 }
1584 } else {
1585 // Interactive ESD
1586 chain = CreateChainSingle(kLocalXMLDataset, "esdTree");
1587 }
1588 }
1589 break;
1590 case 1:
1591 break;
1592 case 2:
1593 if (kPluginUse) {
1594// AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1595// AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1596 } else {
1597 TString treeName = "esdTree";
1598 if (iAODanalysis) treeName = "aodTree";
1599 chain = CreateChainSingle("wn.xml", treeName);
1600 }
1601 break;
1602 default:
1603 }
1604 if (chain && chain->GetNtrees()) return chain;
1605 return NULL;
1606}
1607
1608//______________________________________________________________________________
1609TChain* CreateChainSingle(const char* xmlfile, const char *treeName)
1610{
1611 printf("*******************************\n");
1612 printf("*** Getting the ESD Chain ***\n");
1613 printf("*******************************\n");
1614 TAlienCollection * myCollection = TAlienCollection::Open(xmlfile);
1615
1616 if (!myCollection) {
1617 ::Error("AnalysisTrainPWG4Jets.C::CreateChainSingle", "Cannot create an AliEn collection from %s", xmlfile) ;
1618 return NULL ;
1619 }
1620
1621 TChain* chain = new TChain(treeName);
1622 myCollection->Reset() ;
1623 while ( myCollection->Next() ) chain->Add(myCollection->GetTURL("")) ;
1624 chain->ls();
1625 return chain;
1626}
1627
1628//______________________________________________________________________________
1629Int_t SetupPar(char* pararchivename)
1630{
1631 if (!pararchivename || !strlen(pararchivename)) return -1;
1632 char processline[1024];
1633 if (gSystem->AccessPathName(Form("%s.par", pararchivename))) {
1634 if (!gSystem->AccessPathName(Form("%s/%s.par", gSystem->Getenv("ALICE_ROOT"),pararchivename))) {
1635 ::Info("AnalysisTrainPWG4Jets.C::SetupPar", "Getting %s.par from $ALICE_ROOT", pararchivename);
9748e967 1636 TFile::Cp(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", pararchivename)),
1637 Form("%s.par",pararchivename));
c38e3b95 1638 } else {
1639 ::Error("AnalysisTrainPWG4Jets.C::SetupPar", "Cannot find %s.par", pararchivename);
1640 return -1;
1641 }
1642 }
1643 if (kPluginUse && kSaveTrain) gSystem->Exec(Form("ln -s ../%s.par %s",pararchivename, kTrainName.Data()));
1644 gSystem->Exec(Form("tar xvzf %s.par", pararchivename));
1645
1646 TString ocwd = gSystem->WorkingDirectory();
1647 if (!gSystem->ChangeDirectory(pararchivename)) return -1;
1648
1649 // check for BUILD.sh and execute
1650 if (!gSystem->AccessPathName("PROOF-INF/BUILD.sh")) {
1651 printf("*******************************\n");
1652 printf("*** Building PAR archive ***\n");
1653 printf("*******************************\n");
1654 if (gSystem->Exec("PROOF-INF/BUILD.sh")) {
1655 Error("runProcess","Cannot Build the PAR Archive! - Abort!");
1656 return -1;
1657 }
1658 }
1659
1660 // check for SETUP.C and execute
1661 if (!gSystem->AccessPathName("PROOF-INF/SETUP.C")) {
1662 printf("*******************************\n");
1663 printf("*** Setup PAR archive ***\n");
1664 printf("*******************************\n");
1665 gROOT->Macro("PROOF-INF/SETUP.C");
1666 }
4478beda 1667 if (!gSystem->ChangeDirectory(ocwd.Data())){
1668 Error("Change back directory",Form("Cannot change to %s",ocwd.Data()));
1669 return -1;
1670 }
c38e3b95 1671 return 0;
1672}
1673
1674//______________________________________________________________________________
1675AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode)
1676{
1677// Check if user has a valid token, otherwise make one. This has limitations.
1678// One can always follow the standard procedure of calling alien-token-init then
1679// source /tmp/gclient_env_$UID in the current shell.
c8fb37dd 1680// if (!AliAnalysisGrid::CreateToken()) return NULL;
c38e3b95 1681 AliAnalysisAlien *plugin = new AliAnalysisAlien();
1682// Set the run mode (can be "full", "test", "offline", "submit" or "terminate")
1683 plugin->SetRunMode(plugin_mode);
1684 if (kPluginUseProductionMode) plugin->SetProductionMode();
1685 plugin->SetJobTag(kJobTag);
d8f21f85 1686 plugin->SetNtestFiles(1);
c38e3b95 1687// plugin->SetPreferedSE("ALICE::NIHAM::File");
1688// Set versions of used packages
e84da0a5 1689 plugin->SetAPIVersion("V1.1x");
1690 // plugin->SetAPIVersion("V1.0x");
1691// plugin->SetAPIVersion("V2.4");
c38e3b95 1692 plugin->SetROOTVersion(kPluginRootVersion);
1693 plugin->SetAliROOTVersion(kPluginAliRootVersion);
1694// Declare input data to be processed.
1695// Method 1: Create automatically XML collections using alien 'find' command.
1696// Define production directory LFN
1697 plugin->SetGridDataDir(kGridDatadir.Data());
1698// Set data search pattern
d8f21f85 1699 if (iAODanalysis) plugin->SetDataPattern(" *AliAOD.Jets.root");
c8fb37dd 1700 // else plugin->SetDataPattern(Form(" %s/*/*ESD.tag.root",kGridPassPattern.Data()));
1701 else plugin->SetDataPattern(Form(" %s/*/*AliESDs.root",kGridPassPattern.Data()));
c38e3b95 1702// ...then add run numbers to be considered
1703// plugin->SetRunRange(kGridRunRange[0], kGridRunRange[1]);
1704 for (Int_t i=kGridRunRange[0]; i<=kGridRunRange[1]; i++) {
1705 Printf("AnalysisTrainPWG4Jets Adding run number %s", Form(kGridRunPattern.Data(),i));
1706 plugin->AddRunNumber(Form(kGridRunPattern.Data(),i));
1707 }
1708
1709 if(kGridLocalRunList.Length()>0){
1710 ifstream in1;
1711 in1.open(kGridLocalRunList.Data());
1712 int iRun;
4d16db9c 1713 int icount = 0;
9a5c5b1e 1714 /*
e84da0a5 1715 char c;
1716 char cLine[250];
1717 while(!in1.eof()){
1718 c = in1.get();
1719 if ( (c >= '0') && (c <= '9') )
1720 {
d8f21f85 1721 in1.putback (c)s;
e84da0a5 1722 in1>>iRun;
1723 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1724 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
1725 }
1726 else
1727 {
1728 in1.putback (c);
1729 in1.getline(cLine,250);
9a5c5b1e 1730
1731 }
1732 }
1733 */
9748e967 1734
1735 Int_t nRun = 0;
9a5c5b1e 1736
1737 // just use run numbers, negatives will be excluded
1738 while(in1>>iRun){
ffab794c 1739 if(iRun>=0){
1740 if(iRun>=0&&nRun>=kGridOffsetRunFromList&&(nRun<kGridMaxRunsFromList)){
9a5c5b1e 1741 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1742 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
ffab794c 1743
1744 }
1745 else{
1746 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d", iRun);
1747 }
36c36a0c 1748 nRun++;
9a5c5b1e 1749 }
1750 else{
1751 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d", iRun);
e84da0a5 1752 }
c38e3b95 1753 }
1754 }
1755
1756// Method 2: Declare existing data files (raw collections, xml collections, root file)
1757// If no path mentioned data is supposed to be in the work directory (see SetGridWorkingDir())
1758// XML collections added via this method can be combined with the first method if
1759// the content is compatible (using or not tags)
1760// plugin->AddDataFile("tag.xml");
1761// plugin->AddDataFile("/alice/data/2008/LHC08c/000057657/raw/Run57657.Merged.RAW.tag.root");
1762// Define alien work directory where all files will be copied. Relative to alien $HOME.
3878a941 1763 TString alien_workdir = "";
1764
1765 if (iAODanalysis) alien_workdir += "analysisAOD";
1766 else alien_workdir += "analysisESD";
1767 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
1768 plugin->SetGridWorkingDir(alien_workdir.Data());
1769
c38e3b95 1770 // Declare alien output directory. Relative to working directory.
1771 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
1772 plugin->SetGridOutputDir(kGridOutdir);
1773
1774 // Add external packages
1775 if (iJETAN||iDIJETAN) {
23adcac8 1776 plugin->AddExternalPackage("boost::v1_43_0");
1777 plugin->AddExternalPackage("cgal::v3.6");
1778 plugin->AddExternalPackage("fastjet::v2.4.2");
c38e3b95 1779 }
1780
1781
1782 // set extra libs before par file compilation
1783 anaLibs += kGridExtraFiles;
1784 anaLibs = anaLibs.Strip();
e84da0a5 1785 Printf("anaLibs %s",anaLibs.Data());
1786 Printf("anaLibsExtra %s",anaLibsExtra.Data());
1787
1788 if (anaLibs.Length()) plugin->SetAdditionalLibs(anaLibs.Data());
1789 if (anaLibsExtra.Length()) plugin->SetAdditionalRootLibs(anaLibsExtra.Data());
c38e3b95 1790
1791 TString ana_sources = "";
1792 TString ana_add = "";
1793 if (kUsePAR && anaPars.Length()) {
1794 printf("%s\n", anaPars.Data());
1795 TObjArray *arr;
1796 TObjString *objstr;
1797 arr = anaPars.Tokenize(" ");
1798 TIter next(arr);
1799 while ((objstr=(TObjString*)next())) plugin->EnablePackage(objstr->GetString());
1800 delete arr;
1801 }
1802
1803// Declare the analysis source files names separated by blancs. To be compiled runtime
1804// using ACLiC on the worker nodes.
1805 ana_sources = anaSources.Strip();
1806// Declare all libraries (other than the default ones for the framework. These will be
1807// loaded by the generated analysis macro. Add all extra files (task .cxx/.h) here.
1808
1809 if (ana_sources.Length()) plugin->SetAnalysisSource(ana_sources);
1810 plugin->SetExecutableCommand(kPluginExecutableCommand.Data());
4721d8c5 1811 // Declare the output file names separated by blancs.
1812 // (can be like: file.root or file.root@ALICE::Niham::File)
c38e3b95 1813 plugin->SetMergeExcludes(kGridMergeExclude);
1814 plugin->SetMaxMergeFiles(kGridMaxMergeFiles);
1815 plugin->SetNrunsPerMaster(kGridRunsPerMaster);
9a5c5b1e 1816 plugin->SetMergeViaJDL(kPluginMergeViaJDL);
4721d8c5 1817 // Use fastread option
9a5c5b1e 1818 plugin->SetFastReadOption(kPluginFastReadOption);
4721d8c5 1819 // UseOverwrite mode
9a5c5b1e 1820 plugin->SetOverwriteMode(kPluginOverwriteMode);
4721d8c5 1821 // Optionally define the files to be archived.
1822 // plugin->SetOutputArchive("log_archive.zip:stdout,stderr@ALICE::NIHAM::File root_archive.zip:AliAOD.root,AOD.tag.root@ALICE::NIHAM::File");
dc6a7461 1823 plugin->SetOutputToRunNo(kPluginOutputToRunNumber); // write the output to subdirs named after run number
c38e3b95 1824
1825 // Put default output files to archive
1826 TString listhists = "";
1827 TString listaods = "";
1828 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1829 TIter next(mgr->GetOutputs());
1830 AliAnalysisDataContainer *output;
1831 while ((output=(AliAnalysisDataContainer*)next())) {
1832 const char *filename = output->GetFileName();
1833 if (!(strcmp(filename, "default"))) {
53c63663 1834 if (!mgr->GetOutputEventHandler()) continue;
c38e3b95 1835 filename = mgr->GetOutputEventHandler()->GetOutputFileName();
e84da0a5 1836 if (listaods.Length()) listaods += " ";
c38e3b95 1837 listaods += filename;
c38e3b95 1838 } else {
e84da0a5 1839 if(!listhists.Contains(filename)){
1840 if (listhists.Length()) listhists += " ";
c38e3b95 1841 listhists += filename;
1842 }
1843 }
1844 }
53c63663 1845
53c63663 1846 if (mgr->GetExtraFiles().Length()) {
e84da0a5 1847 if (listaods.Length()) listaods += " ";
53c63663 1848 listaods += mgr->GetExtraFiles();
c38e3b95 1849 }
53c63663 1850
1851 // if we do not fill the aod we do not need to store it
4721d8c5 1852 // kGridMergeExclude = listaods;
e84da0a5 1853
e2afec0c 1854 if(kSaveAOD>=0){
4721d8c5 1855 TString outputFiles = "";
1856 outputFiles += mgr->GetExtraFiles();
1857 if (listhists.Length()) outputFiles += " ";
1858 outputFiles += listhists;
e84da0a5 1859 plugin->SetDefaultOutputs(kFALSE);
4721d8c5 1860 Printf("%s:%d Starting with the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
1861 // remove
1862 // no harm done when we try to remove something that is not there :)
1863 if(!(kSaveAOD&(1<<0))){
1864 outputFiles.ReplaceAll("AliAOD.root ","");
1865 listaods.ReplaceAll("AliAOD.root ","");
1866 }
1867 if(!(kSaveAOD&(1<<1))){
1868 if(kDeltaAODJetName.Length())outputFiles.ReplaceAll(kDeltaAODJetName.Data(),"");
1869 if(kDeltaAODJetName.Length())listaods.ReplaceAll(kDeltaAODJetName.Data(),"");
1870
1871 }
1872 if(!(kSaveAOD&(1<<2))){
1873 if(kDeltaAODPartCorrName.Length())outputFiles.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
1874 if(kDeltaAODPartCorrName.Length())listaods.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
1875 }
1876 if(!(kSaveAOD&(1<<3))){
1877 if(kDeltaAODJCORRANName.Length())outputFiles.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
1878 if(kDeltaAODJCORRANName.Length())listaods.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
1879 }
1880
1881 //
e2afec0c 1882 plugin->SetDefaultOutputs(kFALSE);
4721d8c5 1883 Printf("%s:%d Saving the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
1884 plugin->SetOutputFiles(outputFiles.Data());
e84da0a5 1885 }
53c63663 1886
4721d8c5 1887 TString outputArchive;
4d5d766e 1888 outputArchive = Form("log_archive.zip:std*@%s","disk=1");
e84da0a5 1889 listaods.ReplaceAll(" ", ",");
1890 listhists.ReplaceAll(" ", ",");
4d5d766e 1891 if (listhists.Length()){
1892 outputArchive += " ";
1893 outputArchive += "root_archive.zip:";
1894 outputArchive += listhists;
1895 if (listaods.Length()){
1896 outputArchive += ",";
1897 outputArchive += listaods;
1898 }
1899 outputArchive += Form("@%s", kGridOutputStorages.Data());
1900 }
1901 else{
1902
1903 if (listaods.Length()){
1904 // we have only aod'ish output
1905 outputArchive += " ";
1906 outputArchive += "root_archive.zip:";
1907 outputArchive += listaods;
1908 outputArchive += Form("@%s", kGridOutputStorages.Data());
1909 }
1910 else{
1911 // no other outputs than std..
c38e3b95 1912 ::Fatal("AnalysisTrainPWG4Jets", "No task output !");
4d5d766e 1913 }
c38e3b95 1914 }
4d5d766e 1915
17d96675 1916 plugin->SetDefaultOutputs(kFALSE);
c38e3b95 1917 plugin->SetOutputArchive(outputArchive);
17d96675 1918
4721d8c5 1919
4d5d766e 1920 // Optionally set a name for the generated analysis macro (default MyAnalysis.C)
c38e3b95 1921 plugin->SetAnalysisMacro(Form("%s.C", kTrainName.Data()));
4d5d766e 1922 // Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)
c38e3b95 1923 plugin->SetSplitMaxInputFileNumber(kGridFilesPerJob);
4d5d766e 1924 // Optionally set number of failed jobs that will trigger killing waiting sub-jobs.
27cdf9c4 1925 // plugin->SetMaxInitFailed(5);
4d5d766e 1926 // Optionally resubmit threshold.
c8fb37dd 1927 // plugin->SetMasterResubmitThreshold(90);
4d5d766e 1928 // Optionally set time to live (default 30000 sec)
d4e8abc5 1929 plugin->SetTTL(54000); // 15h...
4d5d766e 1930 // Optionally set input format (default xml-single)
c38e3b95 1931 plugin->SetInputFormat("xml-single");
4d5d766e 1932 // Optionally modify the name of the generated JDL (default analysis.jdl)
c38e3b95 1933 plugin->SetJDLName(Form("%s.jdl", kTrainName.Data()));
4d5d766e 1934 // Optionally modify the executable name (default analysis.sh)
c38e3b95 1935 plugin->SetExecutable(Form("%s.sh", kTrainName.Data()));
4d5d766e 1936 // Optionally modify job price (default 1)
c38e3b95 1937 plugin->SetPrice(1);
4d5d766e 1938 // Optionally modify split mode (default 'se')
c38e3b95 1939 plugin->SetSplitMode("se");
1940 return plugin;
1941}
1942
1943//______________________________________________________________________________
1944void WriteConfig()
1945{
1946// Write train configuration in a file. The file name has the format:
1947// train_[trainName]_ddMonthyyyy_time.C
1948 if (kUseDate) {
1949 gSystem->Exec("date +%d%b%Y_%Hh%M > date.tmp");
1950 ifstream fdate("date.tmp");
1951 if (!fdate.is_open()) {
1952 ::Error("AnalysisTrainPWG4Jets.C::Export","Could not generate file name");
1953 return;
1954 }
1955 const char date[64];
1956 fdate.getline(date,64);
1957 fdate.close();
1958 gSystem->Exec("rm date.tmp");
1959 kTrainName = Form("train_%s_%s", kTrainName.Data(), date);
1960 } else {
1961 kTrainName = Form("train_%s", kTrainName.Data());
1962 }
1963 TString cdir = gSystem->WorkingDirectory();
1964 gSystem->MakeDirectory(kTrainName);
1965 gSystem->ChangeDirectory(kTrainName);
1966 ofstream out;
1967 out.open(Form("%sConfig.C",kTrainName.Data()), ios::out);
1968 if (out.bad()) {
1969 ::Error("AnalysisTrainPWG4Jets.C::Export", "Cannot open ConfigTrain.C for writing");
1970 return;
1971 }
1972 out << "{" << endl;
1973 out << " kTrainName = " << "\"" << kTrainName.Data() << "\";" << endl;
1974 out << " kProofCluster = " << "\"" << kProofCluster.Data() << "\";" << endl;
1975 out << " kProofUseAFPAR = " << kProofUseAFPAR << ";" << endl;
1976 if (kProofUseAFPAR)
1977 out << " kProofAFversion = " << kProofAFversion.Data() << ";" << endl;
1978 out << " kProofDataSet = " << "\"" << kProofDataSet.Data() << "\";" << endl;
1979 out << " kPluginUse = " << kPluginUse << ";" << endl;
1980 out << " kUsePAR = " << kUsePAR << ";" << endl;
1981 out << " kUseCPAR = " << kUseCPAR << ";" << endl;
1982 out << " kPluginRootVersion = " << "\"" << kPluginRootVersion.Data() << "\";" << endl;
1983 out << " kPluginAliRootVersion = " << "\"" << kPluginAliRootVersion.Data() << "\";" << endl;
1984 out << " kGridDatadir = " << "\"" << kGridDatadir.Data() << "\";" << endl;
1985 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
1986 out << " kGridOutdir = " << "\"" << kGridOutdir.Data() << "\";" << endl;
1987 out << " kGridMaxMergeFiles = " << kGridMaxMergeFiles << ";" << endl;
1988 out << " kGridMergeExclude = " << "\"" << kGridMergeExclude.Data() << "\";" << endl;
1989 out << " kGridRunsPerMaster = " << kGridRunsPerMaster << ";" << endl;
1990 out << " kGridFilesPerJob = " << kGridFilesPerJob << ";" << endl;
1991 out << " kGridRunRange[0] = " << kGridRunRange[0] << ";" << endl;
1992 out << " kGridRunRange[1] = " << kGridRunRange[1] << ";" << endl;
1993 out << " kUseDebug = " << kUseDebug << ";" << endl;
1994 out << " kUseMC = " << kUseMC << ";" << endl;
1995 out << " kUseESDTags = " << kUseESDTags << ";" << endl;
1996 out << " kUseKinefilter = " << kUseKinefilter << ";" << endl;
1997 out << " kUseTR = " << kUseTR << ";" << endl;
1998 out << " kUseAODTags = " << kUseAODTags << ";" << endl;
1999 out << " kSaveTrain = " << "kFALSE;" << endl << endl;
2000 out << " // Analysis modules" << endl;
2001 out << " iAODanalysis = " << iAODanalysis << ";" << endl;
2002 out << " iAODhandler = " << iAODhandler << ";" << endl;
2003 out << " iESDfilter = " << iESDfilter << ";" << endl;
2004 out << " iJETAN = " << iJETAN << ";" << endl;
2005 out << "// Configuration fot the wagons" << endl;
2006 out << "}" << endl;
2007 ::Info("AnalysisTrainPWG4Jets.C::WriteConfig", "Train configuration wrote to file %s", Form("config_%s.C", kTrainName.Data()));
2008 gSystem->ChangeDirectory(cdir);
2009}
2010
2011//______________________________________________________________________________
2012Bool_t LoadConfig(const char *filename)
2013{
2014// Read train configuration from file
2015 if (gSystem->AccessPathName(filename)) {
2016 ::Error("AnalysisTrainPWG4Jets.C::LoadConfig", "Config file name not found");
2017 return kFALSE;
2018 }
2019 gROOT->ProcessLine(Form(".x %s", filename));
2020 ::Info("AnalysisTrainPWG4Jets.C::LoadConfig", "Train configuration loaded from file %s", filename);
2021 return kTRUE;
2022}
2023
2024Bool_t PatchJDL(){
2025 Printf(">>> Patching JDL");
2026 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
2027 AliAnalysisAlien* gridHandler = (AliAnalysisAlien*)mgr->GetGridHandler();
2028 TGridJDL *jdl = gridHandler->GetGridJDL();
2029 if(iJETAN)jdl->AddToPackages("fastjet","v2.4.0");
2030 gridHandler->WriteJDL(kFALSE);
0971dabc 2031 Printf("<<< Patching JDL");
c38e3b95 2032 return kTRUE;
2033}
2034
2035Bool_t PatchAnalysisMacro(){
4721d8c5 2036 Printf(">>> Patching AnalysisMacro");
2037 gSystem->Exec(Form("mv %s.C %s.C_tmp",kTrainName.Data(),kTrainName.Data()));
c38e3b95 2038
2039 ifstream in1;
2040 in1.open(Form("%s.C_tmp", kTrainName.Data()));
2041 char cLine[250];
2042 TString st;
2043 while(in1.getline(cLine,250)){
2044 st += cLine;
2045 st += "\n";
2046 }
4721d8c5 2047 Int_t index= -1;
c38e3b95 2048 index = st.Index("gSystem->Load(\"libPhysics\");");
2049 index += strlen("gSystem->Load(\"libPhysics\");");
4721d8c5 2050 /*
c38e3b95 2051 TObjArray *arr;
2052 TObjString *objstr;
2053 arr = anaLibs.Tokenize(" ");
2054 TIter next(arr);
4721d8c5 2055
c38e3b95 2056 add += "\n\n // added by CKB \n";
2057 while ((objstr=(TObjString*)next())){
e84da0a5 2058 if(objstr->GetString().Contains("PWG3"))continue;
c38e3b95 2059 if(objstr->GetString().EndsWith(".so"))add += Form("gSystem->Load(\"%s\");\n",objstr->GetString().Data());
2060 }
2061 delete arr;
4721d8c5 2062 */
3878a941 2063 // add += Form("AliLog::SetGlobalLogLevel(%d);\n",AliLog::GetGlobalLogLevel());
4721d8c5 2064 TString add = "";
2065
2066 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2067 add += "\n\n // added by CKB \n";
46534866 2068 if(kErrorIgnoreLevel>0)add += Form("gErrorIgnoreLevel = %d;\n",kErrorIgnoreLevel);
23adcac8 2069 add += "\n gSystem->AddIncludePath(\"./\"); \n";
f4132e7d 2070 add += "\n gSystem->SetFPEMask(); \n";
2071
2072
4721d8c5 2073 if(gGrid&&kPluginAliRootVersion.Length()==0){
bbb42949 2074 /*
4721d8c5 2075 add += "\n // Dirty hack for TRD reference data \n";
2076 add += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
2077 add += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
2078 add += "\"); \n";
bbb42949 2079 */
c38e3b95 2080 }
bbb42949 2081
4721d8c5 2082 add += "// BKC \n\n";
2083 st.Insert(index,add.Data());
e84da0a5 2084
2085 if(kUseDebug){
23adcac8 2086 // st.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
e84da0a5 2087 }
2088
4721d8c5 2089 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
2090 index = st.Index("gSystem->AddIncludePath(\"-I$"); // uncommen $ALICE_ROOT include for par files
2091 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2092 st.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
2093 }
c166d299 2094
46534866 2095 if(AliLog::GetGlobalLogLevel()==AliLog::kFatal){
2096 index = st.Index("AliLog::SetGlobal"); // ncomment setting of log level, do my own
2097 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2098 st.Insert(index,"AliLog::SetGlobalLogLevel(AliLog::kFatal);// CKB \n // CKB comment out for own setting \n //");
2099 }
2100
c38e3b95 2101 ofstream out;
2102 out.open(Form("%s.C", kTrainName.Data()));
2103 if (out.bad()) {
2104 return kFALSE;
2105 }
2106 out << st << endl;
2107 Printf("<<< Patching AnalysisMacro");
4721d8c5 2108
2109
2110
2111
2112
2113 Printf(">>> Patching Merge Macro");
2114 gSystem->Exec(Form("mv %s_merge.C %s_merge.C_tmp",kTrainName.Data(),kTrainName.Data()));
2115
2116 ifstream in2;
2117 in2.open(Form("%s_merge.C_tmp", kTrainName.Data()));
2118 TString st2;
2119 while(in2.getline(cLine,250)){
2120 st2 += cLine;
2121 st2 += "\n";
2122 }
2123 index = st2.Index("gSystem->Load(\"libPhysics\");");
2124 index += strlen("gSystem->Load(\"libPhysics\");");
2125 TString add2 = "";
23adcac8 2126 add2 += "\n gSystem->AddIncludePath(\"./\"); \n";
4721d8c5 2127 if(gGrid&&kPluginAliRootVersion.Length()==0){
bbb42949 2128 /*
4721d8c5 2129 add2 += "\n // Dirty hack for TRD reference data \n";
2130 add2 += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
2131 add2 += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
2132 add2 += "\"); \n";
bbb42949 2133 */
4721d8c5 2134 }
2135 add2 += "// BKC \n\n";
2136 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2137 st2.Insert(index,add.Data());
2138
2139
2140 if(kUseDebug){
23adcac8 2141 // st2.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
4721d8c5 2142 }
2143
2144 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
46534866 2145 index = st2.Index("gSystem->AddIncludePath(\"-I$"); // uncomment $ALICE_ROOT include for par files
4721d8c5 2146 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2147 st2.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
2148 }
2149
2150 // do not exclude the extra files from merign, this is done explicitly in this train script
92d850d5 2151 // index = st2.Index("mergeExcludes +="); // uncommen $ALICE_ROOT include for par files
2152 // if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2153 // st2.Insert(index,"// CKB comment out, handled explicitly by the train macro \n //");
4721d8c5 2154
2155
2156 ofstream out2;
2157 out2.open(Form("%s_merge.C", kTrainName.Data()));
2158 if (out2.bad()) {
2159 return kFALSE;
2160 }
2161 out2 << st2 << endl;
2162 Printf("<<< Patching Merging Macro");
2163
2164
2165
c38e3b95 2166 return kTRUE;
2167
2168}