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adding task for subtracting background after jet finding, used for all clustering...
[u/mrichter/AliRoot.git] / PWG4 / macros / AnalysisTrainPWG4Jets.C
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c38e3b95 1//===================== ANALYSIS TRAIN =========================================
2// To use: copy this macro to your work directory, modify the global part to match
3// your needs, then run root.
4// root[0] .L AnalysisTrain.C
5// Grid full mode as below (other modes: test, offline, submit, terminate)
121e4bd5 6// root[1] AnalysisTrainPWG-244Jets("grid", "full")
c38e3b95 7// CAF mode (requires root v5-23-02 + aliroot v4-16-Rev08)
8// root[2] AnalysisTrainPWG4Jets("proof")
9// Local mode requires AliESds.root or AliAOD.root in ./data directory
10// root[3] AnalysisTrainPWG4Jets("local")
11// In proof and grid modes, a token is needed and sourcing the produced environment file.
12//
13// If 'saveTrain' flag is set, the train will generate a directory name and run
14// in this directory. A configuration file 'ConfigTrain.C' will be generated.
15// One can replay at any time the train via:
16// root[1] AnalysisTrainPWG4Jets(ana_mode, plugin_mode, "train_default_<date>/ConfigTrain.C")
17
18// For Usage with fastjet run in "offline" first and then "submit"
19// jdl and analysismacro are automatically patched after "offline" mode
20
21// =============================================================================
22// ### General Steering variables
23// =============================================================================
24//== general setup variables
25TString kTrainName = "testAnalysis"; // *CHANGE ME* (no blancs or special characters)
26TString kJobTag = "PWG4 Jet Tasks analysis train configured"; // *CHANGE ME*
27
28// Usage of par files ONLY in grid mode and ONLY if the code is not available
29// in the deployed AliRoot versions. Par file search path: local dir, if not there $ALICE_ROOT.
30// To refresh par files, remove the ones in the workdir, then do "make <target.par>" in
31// AliRoot.
32Bool_t kUsePAR = kFALSE; // use par files for extra libs
33Bool_t kUseCPAR = kFALSE; // use par files for common libs
34Bool_t kFillAOD = kFALSE; // switch of AOD filling for on the fly analysis
4721d8c5 35Int_t kSaveAOD = 8; // Bit switch 1 = Full AOD 2 = Jet AOD , 4 = PartCorr, 8 = JCORRAN
c38e3b95 36//== general input and output variables
9a5c5b1e 37
c38e3b95 38Int_t iAODanalysis = 1; // Analysis on input AOD's
39Int_t iAODhandler = 1; // Analysis produces an AOD or dAOD's
f4132e7d 40Int_t iCentralitySelection = 0; // Use the centrality
c38e3b95 41Int_t iESDfilter = 0; // ESD to AOD filter (barrel + muon tracks)
e84da0a5 42Int_t iPhysicsSelection = 1; // ESD to AOD filter (barrel + muon tracks)
d8f21f85 43UInt_t iPhysicsSelectionFlag = 1; // set by pyshics selection and passed to the task, kMB, kUserDefined etc
cfd02305 44Bool_t useTender = kFALSE; // use tender wagon
c38e3b95 45Bool_t kUseKinefilter = kFALSE; // use Kinematics filter
46Bool_t kUseMuonfilter = kFALSE; // use Kinematics filter
47TString kCommonOutputFileName = "PWG4_JetTasksOutput.root";
9748e967 48TString kCaloQAOutputFileName = "PWG4_CaloQAOutput.root";
c38e3b95 49
50
51//== general process variables
52
53// ### Other flags to steer the analysis
54//==============================================================================
9a5c5b1e 55Bool_t kSkipTerminate = kTRUE; // Do not call Teminate
c38e3b95 56Bool_t kUseDate = kFALSE; // use date in train name
57Bool_t kUseDebug = kTRUE; // activate debugging
46534866 58Int_t kErrorIgnoreLevel = -1; // takes the errror print level from .rootrc
59// From TError.h:
60// const Int_t kUnset = -1;
61// const Int_t kPrint = 0;
62// const Int_t kInfo = 1000;
63// const Int_t kWarning = 2000;
64// const Int_t kError = 3000;
65// const Int_t kBreak = 4000;
66// const Int_t kSysError = 5000;
67// const Int_t kFatal = 6000;
68Int_t kUseSysInfo = 0; // activate debugging
d8f21f85 69Long64_t kNumberOfEvents = 1234567890; // number of events to process from the chain
c38e3b95 70Bool_t kUseMC = kTRUE; // use MC info
71Bool_t kIsMC = kTRUE; // is MC info, if false it overwrites Use(AOD)MC
72Bool_t kUseAODMC = kTRUE; // use MC infA
73Bool_t kUseESDTags = kFALSE; // use ESD tags for selection
74Bool_t kUseTR = kFALSE; // use track references
75Bool_t kUseAODTags = kFALSE; // use AOD tags
76Bool_t kSaveTrain = kFALSE; // save train configuration as:
f4132e7d 77Bool_t kIsPbPb = kFALSE; // Pb+Pb
c38e3b95 78
9a5c5b1e 79
c38e3b95 80// ### Analysis modules to be included. Some may not be yet fully implemented.
81//==============================================================================
82Int_t iJETAN = 1; // Jet analysis (PWG4) // 1 write standard 2 write non-standard jets, 3 wrtie both
d8f21f85 83TString kDefaultJetBranch = ""; // is currently set when filled (iJETAN or clusters) or from config macro
84TString kDefaultJetBackgroundBranch = ""; // is currently set when filled (jet clsuters
85TString kDefaultJetBranchMC = ""; // is currently set when filled (iJETAN or clusters) or from config macro
86TString kDefaultJetBackgroundBranchMC = ""; // is currently set when filled (jet clsuters
87TString kDefaultJetBranchMC2 = ""; // is currently set when filled (iJETAN or clusters) or from config macro
88TString kDefaultJetBackgroundBranchMC2 = ""; // is currently set when filled (jet clsuters
c38e3b95 89Int_t iDIJETAN = 1;
e6993a52 90Int_t iJETANLib = 1;
c38e3b95 91Int_t iPWG1QASym = 0; // Eva's QA task compiled on the fly...
36c36a0c 92Int_t iPWG4FastEmbedding = 0; // Generate non-standard AOD for embedding
c38e3b95 93Int_t iPWG4JetTasks = 0; // all jet tasks flag for lib laoding
94Int_t iPWG4JetServices = 0; // jet spectrum analysis
95Int_t iPWG4JetSpectrum = 0; // jet spectrum analysis
58ef946c 96Int_t iPWG4JCORRAN = 0; // JCORRAN module
c38e3b95 97Int_t iPWG4UE = 0; // Underlying Event analysis
e0c120d9 98Int_t iPWG4LeadingUE = 0; // Underlying Event analysis
99Int_t iPWG4CorrectionsUE = 0; // Underlying Event analysis
c166d299 100Int_t iPWG4TmpSourceSara = 0; // Underlying Event analysis not in svn
aba42fcb 101Int_t iPWG4Fragmentation = 0; // Official Fragmentation
9f77f0ce 102Int_t iPWG4JetChem = 0; // Jet chemistry
c38e3b95 103Int_t iPWG4PtQAMC = 0; // Marta's QA tasks
104Int_t iPWG4PtSpectra = 0; // Marta's QA tasks
105Int_t iPWG4PtQATPC = 0; // Marta's QA tasks
4721d8c5 106Int_t iPWG4Cosmics = 0; // Marta's Cosmics Taks
c38e3b95 107Int_t iPWG4ThreeJets = 0; // Sona's thrust task
cc636095 108Int_t iPWG4QGSep = 0; // Sona's QG Separation task
109Int_t iPWG4Minijet = 0; // Eva's Mini Jet Task cluster task
b53f2e4f 110Int_t iPWG4KMeans = 0; // Andreas' KMeans task
d2e6cdd5 111Int_t iPWG4Cluster = 0; // CKB cluster task
4721d8c5 112Int_t iEMCUtilLibs = 0; // Flag to satisfy dependence on EMC utils
911a740f 113Int_t iPWG4PartCorrLibs = 0; // Gustavo's part corr analysis
c38e3b95 114Int_t iPWG4PartCorr = 0; // Gustavo's part corr analysis
d2e6cdd5 115Int_t iPWG4CaloQA = 0; // Gustavo's part corr analysis
116Int_t iPWG4JetCorr = 0; // Paul's jet corr analysis
911a740f 117Int_t iPWG4Tagged = 0; // Gustavo's part corr analysis
121e4bd5 118Int_t iPWG4omega3pi = 0; // Omega to 3 pi analysis (PWG4)
17d96675 119Int_t iPWG4GammaConvLib = 0; // Gamma Conversio
53c63663 120Int_t iPWG4GammaConv = 0; // Gamma Conversio
17d96675 121Int_t iPWG4CaloConv = 0; // Gamma Conversio
22e3ae6c 122Int_t kHighPtFilterMask = 32; // change depending on the used AOD Filter
e6993a52 123TString kDeltaAODJetName = "AliAOD.Jets.root";
4721d8c5 124TString kDeltaAODJCORRANName = "AliAOD.JCORRAN.root";
f4132e7d 125TString kDeltaAODPartCorrName = "AliAOD.PartCorr.root";
36c36a0c 126TString kFastEmbeddingAOD = "emb/AliAOD.root";
c38e3b95 127
128//==============================================================================
129// ### PROOF Steering varibales
130//==============================================================================
131//== proof setup variables
132TString kProofCluster = "alicecaf.cern.ch";
133Bool_t kProofUseAFPAR = kFALSE; // use AF special par file
134TString kProofAFversion = "AF-v4-17";
135//== proof input and output variables
136TString kProofDataSet = "/COMMON/COMMON/LHC09a4_run8100X#/esdTree";
137Bool_t kProofSaveToAlien = kFALSE; // save proof outputs in AliEn train_[trainName]_ddMonthyyyy_time.C
138TString kProofOutdir = "";
139Bool_t kProofClearPackages = kFALSE;
140Int_t kProofEvents = 10000;
141Int_t kProofOffset = 0;
142//== proof process variables
143
144
145//==============================================================================
146// ### Grid plugin Steering varibiables
147//==============================================================================
148//== grid plugin setup variables
149Bool_t kPluginUse = kTRUE; // do not change
150Bool_t kPluginUseProductionMode = kFALSE; // use the plugin in production mode
39e7e8ab 151TString kPluginRootVersion = "v5-27-06b"; // *CHANGE ME IF MORE RECENT IN GRID*
d3af0232 152TString kPluginAliRootVersion = "v4-19-15-AN"; // *CHANGE ME IF MORE RECENT IN GRID*
9a5c5b1e 153Bool_t kPluginMergeViaJDL = kTRUE; // merge via JDL
154Bool_t kPluginFastReadOption = kFALSE; // use xrootd tweaks
155Bool_t kPluginOverwriteMode = kTRUE; // overwrite existing collections
dc6a7461 156Int_t kPluginOutputToRunNumber = 1; // write the output to subdirs named after run number
c38e3b95 157// TString kPluginExecutableCommand = "root -b -q";
158TString kPluginExecutableCommand = "source /Users/kleinb/setup_32bit_aliroot_trunk_clean_root_trunk.sh; alienroot -b -q ";
9a5c5b1e 159
c38e3b95 160// == grid plugin input and output variables
161TString kGridDatadir = "/alice/sim/PDC_08b/LHC09a1/AOD/";
9748e967 162Int_t kGridMaxRunsFromList = 999999999;
4d16db9c 163Int_t kGridOffsetRunFromList = 0; // skip the first n runs from the list
c38e3b95 164TString kGridLocalRunList = "";
165TString kGridOutdir = ""; // AliEn output directory. If blank will become output_<kTrainName>
3878a941 166TString kGridDataSet = ""; // sub working directory not to confuse different run xmls
9748e967 167Int_t kGridRunRange[2] = {0, -1}; // Set the run range
c38e3b95 168TString kGridRunPattern = "%03d"; // important for leading zeroes!!
169TString kGridPassPattern = "";
170TString kGridExtraFiles = ""; // files that will be added to the input list in the JDL...
9748e967 171Int_t kGridMaxMergeFiles = 12; // Number of files merged in a chunk grid run range
c38e3b95 172TString kGridMergeExclude = "AliAOD.root"; // Files that should not be merged
6408fe42 173TString kGridOutputStorages = "disk=2"; // Make replicas on the storages
c38e3b95 174// == grid process variables
c28abe00 175Int_t kGridRunsPerMaster = 100; // Number of runs per master job
e84da0a5 176Int_t kGridFilesPerJob = 100; // Maximum number of files per job (gives size of AOD)
c38e3b95 177
178//==============================================================================
179// ### Local Steering variables
180//==============================================================================
181//== local setup variables
182//== local input and output variables
183TString kLocalXMLDataset = ""; // Change local xml dataset for local interactive analysis
184TString kLocalDataList = "local_deltaaod.txt"; // Change local xml dataset for local interactive analysis
185// == local process variables
186
8ecf60e0 187TString kPluginMode;
c38e3b95 188
189
190// Temporaries.
191TString anaPars = "";
192TString anaLibs = "";
e84da0a5 193TString anaLibsExtra = "";
c38e3b95 194TString anaSources = "";
195// Function signatures
196class AliAnalysisAlien;
197
198//______________________________________________________________________________
199void AnalysisTrainPWG4Jets(const char *analysis_mode="local",
200 const char *plugin_mode="",
4d16db9c 201 const char *config_file="",Int_t iOffset = 0,Int_t iTotal = 0)
c38e3b95 202{
203// Main analysis train macro. If a configuration file is provided, all parameters
204// are taken from there but may be altered by CheckModuleFlags.
3878a941 205
8ecf60e0 206 // these flag may be needed by the config file
207 kPluginMode = plugin_mode;
208
209 if (strlen(config_file) && !LoadConfig(config_file)) return;
4d16db9c 210 if(iTotal>0)kGridMaxRunsFromList = iTotal; // overwrites the settings from config file
211 if(iOffset)kGridOffsetRunFromList = iOffset;
212 if(iOffset)kProofOffset = iOffset;
213
3878a941 214
c38e3b95 215 TString smode(analysis_mode);
216 smode.ToUpper();
217 if (kSaveTrain)WriteConfig();
8ecf60e0 218 // Check compatibility of selected modules
c38e3b95 219 CheckModuleFlags(smode);
ebad39a9 220 // gROOT->ProcessLine(".trace");
c38e3b95 221
222 printf("==================================================================\n");
223 printf("=========== RUNNING ANALYSIS TRAIN %s IN %s MODE ==========\n", kTrainName.Data(),smode.Data());
224 printf("==================================================================\n");
9748e967 225 printf("= Configuring analysis train for: =\n");
c38e3b95 226 if (iAODanalysis) printf("= AOD analysis =\n");
9748e967 227 else printf("= ESD analysis =\n");
228 if (iPhysicsSelection) printf("= Physics selection =\n");
f4132e7d 229 if(iCentralitySelection)printf("= Centrality selection =\n");
cfd02305 230 if (useTender) printf("= Using tender =\n");
c38e3b95 231 if (iESDfilter) printf("= ESD filter =\n");
232 if (iJETAN) printf("= Jet analysis =\n");
233 printf("==================================================================\n");
9748e967 234
235 char *printMask = ":: %20s %10d\n";
236 printf(printMask,"Fill AOD",(UInt_t)kFillAOD);
237 printf(printMask,"Save AOD", (UInt_t)kSaveAOD);
238 printf(printMask,"MC truth", (UInt_t)kUseMC);
239 printf(printMask,"KINE filter", (UInt_t)kUseKinefilter);
240 printf(printMask,"track refs", (UInt_t)kUseTR);
241 printf(printMask,"tags", (UInt_t)kUseESDTags);
242 printf(printMask,"AOD tags", (UInt_t)kUseAODTags);
243 printf(printMask,"debugging", (UInt_t)kUseDebug);
244 printf(printMask,"PAR files", (UInt_t)kUsePAR);
245 printf(printMask,"AliEn plugin", (UInt_t)kPluginUse);
246 printf(printMask,"PWG1 QA sym", iPWG1QASym);
247 printf(printMask,"PWG4 Source Sara",iPWG4TmpSourceSara);
aba42fcb 248 printf(printMask,"PWG4 Fragmentation",iPWG4Fragmentation);
9748e967 249 printf(printMask,"PWG4 Jet Chem",iPWG4JetChem);
250 printf(printMask,"PWG4 Jet tasks",iPWG4JetTasks);
251 printf(printMask,"PWG4 Jet Services",iPWG4JetServices);
252 printf(printMask,"PWG4 Jet Spectrum",iPWG4JetSpectrum);
253 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
254 printf(printMask,"PWG4 UE",iPWG4UE);
e0c120d9 255 printf(printMask,"PWG4 Leading UE",iPWG4LeadingUE);
9748e967 256 printf(printMask,"PWG4 Corrections UE",iPWG4CorrectionsUE);
257 printf(printMask,"PWG4 Pt QA MC",iPWG4PtQAMC);
258 printf(printMask,"PWG4 Pt Spectra",iPWG4PtSpectra);
259 printf(printMask,"PWG4 Pt QA TPC",iPWG4PtQATPC);
260 printf(printMask,"PWG4 Cosmics",iPWG4Cosmics);
261 printf(printMask,"PWG4 Three Jets",iPWG4ThreeJets);
cc636095 262 printf(printMask,"PWG4 QGSep",iPWG4QGSep);
263 printf(printMask,"PWG4 Minijet",iPWG4Minijet);
9748e967 264 printf(printMask,"PWG4 KMeans",iPWG4KMeans);
265 printf(printMask,"PWG4 Cluster",iPWG4Cluster);
266 printf(printMask,"PWG4 Part Corr",iPWG4PartCorr);
267 printf(printMask,"PWG4 Calo QA",iPWG4CaloQA);
268 printf(printMask,"PWG4 Jet Corr",iPWG4JetCorr);
269 printf(printMask,"PWG4 JCORRAN",iPWG4JCORRAN);
270 printf(printMask,"PWG4 Tagged",iPWG4Tagged);
271 printf(printMask,"PWG4 omega to 3 pi ",iPWG4omega3pi);
272 printf(printMask,"PWG4 Gamma Conv",iPWG4GammaConv);
17d96675 273 printf(printMask,"PWG4 Calo Conv",iPWG4CaloConv);
9748e967 274 printf(printMask,"HighPt FilterMask",kHighPtFilterMask);
3878a941 275
c38e3b95 276 //==========================================================================
277 // Connect to back-end system
278 if (!Connect(smode)) {
279 ::Error("AnalysisTrain", "Could not connect to %s back-end", analysis_mode);
280 return;
281 }
282
283 // Load common libraries and set include path
284 if (!LoadCommonLibraries(smode)) {
285 ::Error("AnalysisTrain", "Could not load common libraries");
286 return;
287 }
3878a941 288
289
c38e3b95 290
291 // Make the analysis manager and connect event handlers
e84da0a5 292 AliAnalysisManager *mgr = new AliAnalysisManager("PWG4Train", "pwg4 mini train");
c38e3b95 293 if (kCommonOutputFileName.Length()>0)mgr->SetCommonFileName(kCommonOutputFileName.Data());
294 if (kProofSaveToAlien) mgr->SetSpecialOutputLocation(kProofOutdir);
4a6f59cb 295 mgr->SetNSysInfo(0);
c38e3b95 296 if (!strcmp(plugin_mode, "test")) mgr->SetNSysInfo(1);
53c63663 297 if (kUseSysInfo)mgr->SetNSysInfo(kUseSysInfo);
9a5c5b1e 298 mgr->SetSkipTerminate(kSkipTerminate);
4a6f59cb 299
c38e3b95 300 // Load analysis specific libraries
301 if (!LoadAnalysisLibraries(smode)) {
302 ::Error("AnalysisTrain", "Could not load analysis libraries");
303 return;
304 }
305
306 // Create input handler (input container created automatically)
307 if (iAODanalysis) {
308 // AOD input handler
309 AliAODInputHandler *aodH = new AliAODInputHandler();
310 mgr->SetInputEventHandler(aodH);
ffab794c 311 // if (iPWG4JetTasks) aodH->AddFriend(Form("deltas/%s",kDeltaAODJetName.Data()));
312 // if (iPWG4PartCorr) aodH->AddFriend(Form("deltas/%s"kDeltaAODJetName.Data()));
c38e3b95 313 } else {
314 // ESD input handler
315 AliESDInputHandler *esdHandler = new AliESDInputHandler();
316 if (kUseESDTags) esdHandler->SetReadTags();
c166d299 317 esdHandler->SetReadFriends(kFALSE);
c38e3b95 318 mgr->SetInputEventHandler(esdHandler);
4a6f59cb 319 // if(iPWG4PtQATPC&& !kTrainName.Contains("pass5"))esdHandler->SetActiveBranches("ESDfriend");
c166d299 320
c38e3b95 321 }
f4d11ac8 322
c38e3b95 323 // Monte Carlo handler
324 if (kUseMC && !iAODanalysis) {
325 AliMCEventHandler* mcHandler = new AliMCEventHandler();
326 mgr->SetMCtruthEventHandler(mcHandler);
327 mcHandler->SetReadTR(kUseTR);
328 }
329 // AOD output container, created automatically when setting an AOD handler
330 if (iAODhandler) {
331 // AOD output handler
332 AliAODHandler* aodHandler = new AliAODHandler();
333 aodHandler->SetOutputFileName("AliAOD.root");
6408fe42 334 aodHandler->SetFillAODforRun(kFillAOD);
121e4bd5 335 //
f4132e7d 336 mgr->SetOutputEventHandler(aodHandler);
c38e3b95 337 AliAnalysisDataContainer * cout_aod = mgr->GetCommonOutputContainer();
338 cout_aod->SetSpecialOutput();
339 }
340 // Debugging if needed
b03b08a3 341
3878a941 342 if (kUseDebug){
343 mgr->SetDebugLevel(3);
344 }
4721d8c5 345 if(kUseSysInfo>0){
346 mgr->RegisterExtraFile("syswatch.root");
347 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
348 kGridMergeExclude += "syswatch.root";
349 }
b03b08a3 350 else{
351 AliLog::SetGlobalLogLevel(AliLog::kError);
352 }
46534866 353
354
c38e3b95 355 //==========================================================================
356 // Create the chain. In this example it is created only from ALIEN files but
357 // can be done to work in batch or grid mode as well.
358 TChain *chain = CreateChain(smode, plugin_mode);
359
360 //==========================================================================
361 // Load the tasks configuration macros for all wagons. These files are supposed now to be
362 // in the current workdir, but in AliEn they will be in the file catalog,
363 // mapped from AliRoot and pecified in the jdl input list.
364
365 // For now connection to top input container and common AOD output container
366 // is done in this macro, but in future these containers will be connected
367 // from each task configuration macro.
cfd02305 368
369 //
370 // Tender and supplies. Needs to be called for every event.
371 //
372 if (useTender) {
373 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/TenderSupplies/AddTaskTender.C");
374 AliAnalysisTaskSE *tender = AddTaskTender(kTRUE);
375 // tender->SelectCollisionCandidates();
376 tender->SetDebugLevel(2);
377 }
378
379
380
e84da0a5 381 if(iPhysicsSelection && !iAODanalysis){
d2e6cdd5 382 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskPhysicsSelection.C");
39e7e8ab 383 Int_t iTriggerHIC = 0;
384 Bool_t rejectBkg = true;
f4132e7d 385 if(kIsPbPb){
39e7e8ab 386 iTriggerHIC = 2;
387 rejectBkg = false; // for the moment...
388 }
389 AliPhysicsSelectionTask* physSelTask = AddTaskPhysicsSelection(kIsMC,rejectBkg);
390 iPhysicsSelectionFlag = AliVEvent::kMB;
d8f21f85 391 // mgr->RegisterExtraFile("EventStat_tmp.root");
e84da0a5 392 }
393
f4132e7d 394 if(iCentralitySelection){
395
396 // has to run before AOD filter
d8f21f85 397 gROOT->LoadMacro("$ALICE_ROOT/ANALYSIS/macros/AddTaskCentrality.C");
398 // const char* file1="$ALICE_ROOT/ANALYSIS/macros/AliCentralityBy1D_137161.root";
399 // const char* file2="$ALICE_ROOT/ANALYSIS/macros/AliCentralityByFunction_137161.root";
400 AliCentralitySelectionTask *taskC = AddTaskCentrality();
f4132e7d 401 if (!taskC) ::Warning("AnalysisTrainPWG4Jets", "AliCentralitySelectionTask cannot run for this train conditions - EXCLUDED");
402 }
403
c38e3b95 404 if (iESDfilter && !iAODanalysis) {
405 // ESD filter task configuration.
ebad39a9 406 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskESDFilterPWG4Train.C");
c38e3b95 407 AliAnalysisTaskESDfilter *taskesdfilter = AddTaskESDFilter(kUseKinefilter,kUseMuonfilter);
d8f21f85 408 taskesdfilter->SetEnableFillAOD(kFALSE);
f4132e7d 409
4721d8c5 410 if(kIsMC){
411 mgr->RegisterExtraFile("pyxsec_hists.root");
412 if(kGridMergeExclude.Length())kGridMergeExclude += " ";
413 kGridMergeExclude += "pyxsec_hists.root";
414
415 }
c38e3b95 416 }
417
418 // AOD tags
419 if (kUseAODTags) {
420 AliAnalysisTaskTagCreator* tagTask = new AliAnalysisTaskTagCreator("AOD Tag Creator");
421 mgr->AddTask(tagTask);
422 AliAnalysisDataContainer *coutTags = mgr->CreateContainer("cTag", TTree::Class(),
423 AliAnalysisManager::kOutputContainer, "AOD.tag.root");
424 mgr->ConnectInput (tagTask, 0, mgr->GetCommonInputContainer());
425 mgr->ConnectOutput(tagTask, 1, coutTags);
426 }
427
36c36a0c 428 if (iPWG4FastEmbedding) {
429 Printf("adding fast embedding task\n");
430 gROOT->LoadMacro("src/AliAnalysisTaskFastEmbedding.cxx++g");
431 gROOT->LoadMacro("macros/AddTaskFastEmbedding.C");
432 AliAnalysisTask *taskEmbedding = AddTaskFastEmbedding(kFastEmbeddingAOD);
433 }
434
c38e3b95 435 // Jet analysis
436 if (iJETAN) {
437 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJets.C");
438 AliAnalysisTaskJets *taskjets = 0;
070f06d2 439 if(iJETAN&1){
440 /*
441 taskjets = AddTaskJets(kHighPtFilterMask);
442 taskjets->SetName("StandardJets");
443 taskjets->SetNonStdBranch("");
444 */
445 }
b53f2e4f 446 if(iJETAN&2){
070f06d2 447 // Set only few jet finders backgroudn subtraction w an wo
448
d8f21f85 449 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,1.,0); // no background subtraction
20b170eb 450 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
d8f21f85 451
452 // STANDARD UA jet finders pT cut 1 GeV background mode 2 R = 0.4
453 taskjets = AddTaskJets("AOD","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
20b170eb 454 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
d8f21f85 455 // EXTRA UA1 Jet finder same as above with R = 0.2
070f06d2 456
d8f21f85 457
458
459 // SICONE
460 taskjets = AddTaskJets("AOD","SISCONE",0.4,kHighPtFilterMask,0.15,0); //no background subtraction to be done later....
461 if(kDeltaAODJetName.Length()>0)taskjets->SetNonStdOutputFile(kDeltaAODJetName.Data());
462
463 if(kUseAODMC){
464 // STANDARD UA jet finders pT cut 1 GeV background mode 2 R = 0.4
465 taskjets = AddTaskJets("AODMC","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
466 taskjets = AddTaskJets("AODMC2","UA1",0.4,kHighPtFilterMask,1.,2); // background subtraction
17d96675 467 }
d8f21f85 468
469
470 if(kDeltaAODJetName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJetName.Data());
b53f2e4f 471 }
c38e3b95 472 if (!taskjets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
473 }
474
d8f21f85 475
36c36a0c 476 if (iPWG4FastEmbedding && iJETAN) {
477 AliAnalysisTaskJets *taskEmbJets = AddTaskJets("AODextra", "FASTKT", 0.4, kHighPtFilterMask);
478 taskEmbJets->ReadAODFromOutput();
479 taskEmbJets = AddTaskJets("AODextraonly", "FASTKT", 0.4, kHighPtFilterMask);
480 taskEmbJets->ReadAODFromOutput();
481 }
482
bd80a748 483 if(iPWG4Cluster){
484 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCluster.C");
485 AliAnalysisTaskJetCluster *taskCl = 0;
ffab794c 486 Float_t fCenUp = 0;
487 Float_t fCenLo = 0;
1c79997e 488 if(kIsPbPb&&!kIsMC){
ffab794c 489 fCenLo = 0;
490 fCenUp = 80;
491 }
bd80a748 492 if(iPWG4Cluster&1){
f4132e7d 493 if(kIsPbPb){
070f06d2 494 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
495 taskCl->SetBackgroundCalc(kTRUE);
496 taskCl->SetCentralityCut(fCenLo,fCenUp);
497 taskCl->SetGhostEtamax(0.9);
d8f21f85 498 kDefaultJetBackgroundBranch = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
499
500 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.2,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
f4132e7d 501 taskCl->SetBackgroundCalc(kTRUE);
ffab794c 502 taskCl->SetCentralityCut(fCenLo,fCenUp);
f4132e7d 503 taskCl->SetGhostEtamax(0.9);
504 }
505 else{
506 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.6,0,1,kDeltaAODJetName.Data()); // this one is for the background jets
507 taskCl->SetBackgroundCalc(kTRUE);
d8f21f85 508 kDefaultJetBackgroundBranch = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
509 }
070f06d2 510 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1,kDeltaAODJetName.Data(),0.15);
ffab794c 511 taskCl->SetCentralityCut(fCenLo,fCenUp);
d8f21f85 512 if(kDeltaAODJetName.Length()==0)taskCl->SetJetTriggerPtCut(40.);
513 taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
514 kDefaultJetBranch = taskCl->GetJetOutputBranch();
515 taskCl = AddTaskJetCluster("AOD","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.2,0,1,kDeltaAODJetName.Data(),0.15);
070f06d2 516 taskCl->SetCentralityCut(fCenLo,fCenUp);
d8f21f85 517 taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranch.Data());
518
d4e8abc5 519 if(kUseAODMC){
1c79997e 520 if(kIsPbPb){
d8f21f85 521 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
522 taskCl->SetBackgroundCalc(kTRUE);
523 taskCl->SetGhostEtamax(0.9);
524 kDefaultJetBackgroundBranchMC = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
1c79997e 525
d8f21f85 526 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"KT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
527 taskCl->SetBackgroundCalc(kTRUE);
528 taskCl->SetGhostEtamax(0.9);
529 kDefaultJetBackgroundBranchMC2 = Form("%s_%s",AliAODJetEventBackground::StdBranchName(),taskCl->GetJetOutputBranch());
1c79997e 530 }
531 else{
d8f21f85 532 // pp background calcs...
533 }
534
535 taskCl = AddTaskJetCluster("AODMC","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
536 taskCl->SetGhostEtamax(0.9);
537 taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchMC.Data());
538 kDefaultJetBranchMC = taskCl->GetJetOutputBranch();
1c79997e 539
d8f21f85 540 taskCl = AddTaskJetCluster("AODMC2","",kHighPtFilterMask,iPhysicsSelectionFlag,"ANTIKT",0.4,0,1, kDeltaAODJetName.Data(),0.15); // this one is for the background and random jets
541 taskCl->SetBackgroundBranch(kDefaultJetBackgroundBranchMC2.Data());
542 kDefaultJetBranchMC2 = taskCl->GetJetOutputBranch();
1c79997e 543
d4e8abc5 544 }
d8f21f85 545
546
bd80a748 547 if (!taskCl) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCluster cannot run for this train conditions - EXCLUDED");
548 }
bd80a748 549 }
550
c38e3b95 551 if (iDIJETAN) {
552 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskDiJets.C");
553 AliAnalysisTaskDiJets *taskdijets = 0;
82ebd295 554 if(iDIJETAN&1)taskdijets = AddTaskDiJets();
c38e3b95 555 if (!taskdijets) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJets cannot run for this train conditions - EXCLUDED");
82ebd295 556 if(iDIJETAN&2){
557 taskdijets = AddTaskDiJets("jetsAOD_CDF07");
558 taskdijets = AddTaskDiJets("jetsAOD_DA07");
559 taskdijets = AddTaskDiJets("jetsAOD_FASTJET07");
560 taskdijets = AddTaskDiJets("jetsAOD_FASTKT07");
561 taskdijets = AddTaskDiJets("jetsAOD_SISCONE07");
562 taskdijets = AddTaskDiJets("jetsAOD_UA107");
563 }
c38e3b95 564 }
565
c38e3b95 566 if(iPWG1QASym){
5dbdc61f 567 gROOT->LoadMacro("$ALICE_ROOT/PWG1/PilotTrain/AddTaskQAsym.C");
c38e3b95 568 AliAnalysisTaskQASym *taskQASym = AddTaskQAsym(-1);
569 if (!taskQASym) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQASym cannot run for this train conditions - EXCLUDED");
121e4bd5 570 }
c38e3b95 571
121e4bd5 572
573
574 if(iPWG4TmpSourceSara){
575 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskEta.C");
576 AliAnalysisTaskEta *taskEta = AddTaskEta();
577 if (!taskEta) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskEta cannot run for this train conditions - EXCLUDED");
c38e3b95 578 }
579
c580ebbb 580
c38e3b95 581 if(iPWG4JetServices){
582 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetServices.C");
583 AliAnalysisTaskJetServices *taskjetServ = 0;
584 taskjetServ = AddTaskJetServices();
585 if (!taskjetServ) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetServices cannot run for this train conditions - EXCLUDED");
53c63663 586 if(kGridRunRange[0]>0)taskjetServ->SetRunRange(kGridRunRange[0],kGridRunRange[1]);
27cdf9c4 587 else taskjetServ->SetRunRange(110000,160000);
588 taskjetServ->SetMCData(kIsMC);
dc6a7461 589 taskjetServ->SetUsePhysicsSelection((Bool_t)iPhysicsSelection);
39e7e8ab 590 taskjetServ->SetPhysicsSelectionFlag(iPhysicsSelectionFlag); //
f4132e7d 591 taskjetServ->SetNonStdFile(kDeltaAODJetName.Data());
592 if(kIsPbPb){
d8f21f85 593 if(kDeltaAODJetName.Length()>0)taskjetServ->SetFilterAODCollisions(kTRUE);
594 taskjetServ->SetZVertexCut(8.);
f4132e7d 595 }
ffab794c 596 if(iAODanalysis){
d8f21f85 597 // taskjetServ->SetDebugLevel(3);
ffab794c 598 taskjetServ->SetAODInput(kTRUE);
599 }
c38e3b95 600 }
601
c38e3b95 602 if(iPWG4JetSpectrum){
603 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetSpectrum2.C");
604 AliAnalysisTaskJetSpectrum2 *taskjetSpectrum = 0;
17d96675 605
6bd3fdae 606 if(iPWG4JetSpectrum&1){
d8f21f85 607 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),"",kDefaultJetBackgroundBranch.Data(),kHighPtFilterMask,AliVEvent::kMB,0,kTRUE,1,0);
608 if(iAODanalysis)SetAODInput(taskjetSpectrum);
609 taskjetSpectrum->SetDebugLevel(3);
f4132e7d 610 if(kIsPbPb){
d8f21f85 611 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),"",kDefaultJetBackgroundBranch.Data(),kHighPtFilterMask,AliVEvent::kMB,0,kTRUE,1,1);
612 if(iAODanalysis)SetAODInput(taskjetSpectrum);
613
614 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),"",kDefaultJetBackgroundBranch.Data(),kHighPtFilterMask,AliVEvent::kMB,0,kTRUE,1,2);
615 if(iAODanalysis)SetAODInput(taskjetSpectrum);
616
617 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),"",kDefaultJetBackgroundBranch.Data(),kHighPtFilterMask,AliVEvent::kMB,0,kTRUE,1,3);
618 if(iAODanalysis)SetAODInput(taskjetSpectrum);
619
620 taskjetSpectrum = AddTaskJetSpectrum2(kDefaultJetBranch.Data(),"",kDefaultJetBackgroundBranch.Data(),kHighPtFilterMask,AliVEvent::kMB,0,kTRUE,1,4);
621 if(iAODanalysis)SetAODInput(taskjetSpectrum);
f4132e7d 622 }
d8f21f85 623 if (!taskjetSpectrum) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetSpectrum2 cannot run for this train conditions - EXCLUDED");
e6993a52 624 }
d8f21f85 625 }
626
627 if(iPWG4Fragmentation){
628 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskFragmentationFunction.C");
629 AliAnalysisTaskFragmentationFunction *taskFrag = 0;
630 if(kUseAODMC){
631
36c36a0c 632 }
d8f21f85 633 else{
634 taskFrag = AddTaskFragmentationFunction(kDefaultJetBranch.Data(),"","","",kHighPtFilterMask);
635 }
636 if (!taskFrag) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskFragmentationFunction cannot run for this train conditions - EXCLUDED");
637 }
638
639 if(iPWG4JetChem){
640 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetChem.C");
641 AliAnalysisTask *taskChem = AddTaskJetChem(kHighPtFilterMask);
642 if (!taskChem) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskJetChem cannot run for this train conditions - EXCLUDED");
c38e3b95 643 }
6bd3fdae 644
645
d8f21f85 646
58ef946c 647 if(iPWG4JCORRAN){
648 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJCORRANTask.C");
4721d8c5 649 AliJCORRANTask* corran = AddTaskJCORRAN(kDeltaAODJCORRANName.Data(),0);
58ef946c 650 if(!corran)::Warning("AnalysisTrainPWG4Jets", "AliJCORRANTask cannot run for this train conditions - EXCLUDED");
4721d8c5 651 else{
652 if(kDeltaAODJCORRANName.Length()>0)mgr->RegisterExtraFile(kDeltaAODJCORRANName.Data());
653 }
58ef946c 654 }
655
c38e3b95 656 if(iPWG4UE){
657 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskUE.C");
658 AliAnalysisTaskUE *taskUE = 0;
659 if(iPWG4UE&1)taskUE = AddTaskUE();
660 if(iPWG4UE&2){
94ee88d4 661 taskUE =AddTaskUE("jetsAOD_CDF04","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
17d96675 662 // taskUE =AddTaskUE("jetsAOD_CDF07","CDF", "LJ", "TRANSV","MSP");
94ee88d4 663 taskUE =AddTaskUE("jetsAOD_SISCONE04","CDF", "LJ", "TRANSV","MSP");
17d96675 664 // taskUE =AddTaskUE("jetsAOD_SISCONE07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
94ee88d4 665 taskUE =AddTaskUE("jetsAOD_ICDF","CDF","LJ","TRANSV","MSP");
666 taskUE =AddTaskUE("jetsAOD_FASTKT04","CDF", "LJ", "TRANSV","MSP");
17d96675 667 // taskUE =AddTaskUE("jetsAOD_FASTKT07","CDF", "LJ", "TRANSV","MSP"); //finder not yet in train
58ef946c 668 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta05", "TRANSV","MSP");
669 taskUE =AddTaskUE("jetsAOD_NONE","CDF", "MP_eta09", "TRANSV","MSP");
c38e3b95 670 }
2bb1f4ca 671
c38e3b95 672 if (!taskUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskUE cannot run for this train conditions - EXCLUDED");
673 }
e0c120d9 674
675 if(iPWG4LeadingUE){
676 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskLeadingTrackUE.C");
677 AliAnalysisTaskLeadingTrackUE *taskLeadingUE = AddTaskLeadingTrackUE(kUseMC);
678 if (!taskLeadingUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTasLeadingTrackkUE cannot run for this train conditions - EXCLUDED");
27cdf9c4 679 // taskLeadingUE->SetFilterBit(64);
e0c120d9 680 }
681
682
9748e967 683 if(iPWG4CorrectionsUE){
684 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCorrectionsUE.C");
685 AliAnalysisTaskCorrectionsUE *taskCorrectionsUE = 0;
686 if(iPWG4CorrectionsUE&1)taskCorrectionsUE = AddTaskCorrectionsUE("jetsAOD_NONE","CDF","MP_eta05","TRANSV","MSP",kFALSE);
687 if (!taskCorrectionsUE) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskCorrectionsUE cannot run for this train conditions - EXCLUDED");
688 }
c38e3b95 689
690 if(iPWG4ThreeJets){
691 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskThreeJets.C");
692 AliAnalysisTaskThreeJets *taskThree = AddTaskThreeJets();
693 if(!taskThree)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskThreets cannot run for this train conditions - EXCLUDED");
694 }
cc636095 695 if(iPWG4QGSep){
696 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskQGSep.C");
697 AliAnalysisTaskQGSep *taskQGSep = AddTaskQGSep(kUseMC,iAODanalysis);
698 if(!taskQGSep)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQGSep cannot run for this train conditions - EXCLUDED");
699 }
700
701
702 if(iPWG4Minijet){
703 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskMinijet.C");
4d16db9c 704 AliAnalysisTaskMinijet *taskMini = AddTaskMinijet(-1,"esd",kUseMC,kGridDataSet);
cc636095 705 // if we ha highmult trigger add another task
706 if(!taskMini)::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskMinjet cannot run for this train conditions - EXCLUDED");
707 }
708
709
c38e3b95 710 if(iPWG4PtQAMC){
711 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQAMC.C");
f87effcf 712 AliPWG4HighPtQAMC *taskQAMC = 0;
713 if(kUseMC){
36c36a0c 714 if(iPWG4PtQAMC&1){
715 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),0);
716 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),1);
717 taskQAMC = AddTaskPWG4HighPtQAMC(kGridDataSet.Data(),2);
718 }
f87effcf 719 }
c38e3b95 720 if (!taskQAMC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQAMC cannot run for this train conditions - EXCLUDED");
721 }
722
723 if(iPWG4PtQATPC){
724 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtQATPConly.C");
10295ac3 725 AliPWG4HighPtQATPConly *taskQATPC = 0;
b1cd0099 726 if(iPWG4PtQATPC&1)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),1);
727 if(iPWG4PtQATPC&2)taskQATPC = AddTaskPWG4HighPtQATPConly(kGridDataSet.Data(),2);
10295ac3 728
729 if (!taskQATPC) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskQATPC cannot run for this train conditions - EXCLUDED");
c38e3b95 730 }
3878a941 731
1f329128 732 if(iPWG4Cosmics){
733 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4CosmicCandidates.C");
734
735 AliPWG4CosmicCandidates *taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(0);
736 taskPWG4CosmicCandidates = AddTaskPWG4CosmicCandidates(1);
737
738 if (!taskPWG4CosmicCandidates) ::Warning("AnalysisTrainPWG4Jets", "AddTaskPWG4CosmicCandidates cannot run for this train conditions - EXCLUDED");
739 }
740
741
c38e3b95 742 if(iPWG4PtSpectra){
743 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPWG4HighPtSpectra.C");
b1cd0099 744 AliPWG4HighPtSpectra *taskPtSpectra = AddTaskPWG4HighPtSpectra(kGridDataSet.Data());
c38e3b95 745 if (!taskPtSpectra) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskPtSpectra cannot run for this train conditions - EXCLUDED");
746 }
b53f2e4f 747 if(iPWG4KMeans){
748 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskKMeans.C");
749 AliAnalysisTaskKMeans *taskKMeans = AddTaskKMeans();
750 if (!taskKMeans) ::Warning("AnalysisTrainPWG4Jets", "AliAnalysisTaskKMenans cannot run for this train conditions - EXCLUDED");
751 }
752
c38e3b95 753 if(iPWG4PartCorr){
754 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskPartCorr.C");
14526afb 755 AliAnalysisTaskParticleCorrelation *taskpartcorrPHOS = AddTaskPartCorr("AOD", "PHOS",kFALSE,kIsMC);
c38e3b95 756 if (!taskpartcorrPHOS) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation PHOS cannot run for this train conditions - EXCLUDED");
14526afb 757 AliAnalysisTaskParticleCorrelation *taskpartcorrEMCAL = AddTaskPartCorr("AOD", "EMCAL",kFALSE,kIsMC);
c38e3b95 758 if (!taskpartcorrEMCAL) ::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation EMCAL cannot run for this train conditions - EXCLUDED");
4721d8c5 759 if(kDeltaAODPartCorrName.Length()>0)mgr->RegisterExtraFile(kDeltaAODPartCorrName.Data());
121e4bd5 760 }
761
d2e6cdd5 762 if(iPWG4CaloQA){
763 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/QA/AddTaskCalorimeterQA.C");
9748e967 764 AliAnalysisTaskParticleCorrelation *taskcaloQA = AddTaskCalorimeterQA("ESD",kFALSE,kIsMC,kCaloQAOutputFileName.Data());
d2e6cdd5 765 if(!taskcaloQA)::Warning("AnalysisTrainNew", "AliAnalysisTaskParticleCorrelation QA cannot run - EXCLUDED");
aba42fcb 766 // if(kCaloQAOutputFileName.Length()>0)mgr->RegisterExtraFile(kCaloQAOutputFileName.Data());
d2e6cdd5 767 }
768
d2e6cdd5 769 if(iPWG4JetCorr){
770 // using namespace JetCorrelHD;
d3af0232 771 TString cdir = gSystem->WorkingDirectory();
772 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
d2e6cdd5 773 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskJetCorrel.C");
774 AliAnalysisTaskJetCorrel *taskjetcorr = AddTaskJetCorrel();
d3af0232 775 gSystem->ChangeDirectory(cdir);
c166d299 776 if (!taskjetcorr) ::Warning("AnalysisTrainNew", "AliAnalysisTaskJetCorrel cannot run for this train conditions - EXCLUDED");
d2e6cdd5 777 }
778
911a740f 779 if(iPWG4Tagged){
780 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskTaggedPhotons.C");
781 AliAnalysisTaskTaggedPhotons * taskTagged = AddTaskTaggedPhotons(kFALSE); // EMCAL
58ef946c 782 taskTagged = AddTaskTaggedPhotons(kTRUE); // PHOS
911a740f 783 if (!taskTagged) ::Warning("AnalysisTrainNew", "AliAnalysisTaskTaggedPhotons cannot run for this train conditions - EXCLUDED");
784 }
121e4bd5 785 if (iPWG4omega3pi) {
786 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskomega3pi.C");
787 AliAnalysisTaskOmegaPi0PiPi *taskomega3pi = AddTaskomega3pi();
788 if (!taskomega3pi) ::Warning("AnalysisTrainNew", "AliAnalysisTaskomega3pi cannot run\
789 for these train conditions - EXCLUDED");
790 }
791
53c63663 792 // PWG4 gamma conversion analysis
793 if (iPWG4GammaConv) {
794 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskGammaConversion.C");
795 TString cdir = gSystem->WorkingDirectory();
796 gSystem->ChangeDirectory(gSystem->ExpandPathName("$ALICE_ROOT/PWG4/macros/"));
797 // TString gcArguments = "-run-on-train -run-jet -run-chic -run-neutralmeson -run-cf";
58ef946c 798 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
799 // TString gcArguments = "-run-on-train -run-jet -run-neutralmeson -run-cf -use-own-xyz";
b0a36f28 800 TString gcArguments = "-run-on-train -run-jet -run-omega-meson -use-own-xyz -run-neutralmeson -no-aod";
27cdf9c4 801 // TString kGCAnalysisCutSelectionId="9003562000100310";
cfd02305 802 // TString kGCAnalysisCutSelectionId="9003562000100312";
803 // gcArguments.Append(Form(" -set-cut-selection %s ",kGCAnalysisCutSelectionId.Data()));
53c63663 804 if(!kIsMC)gcArguments += " -mc-off";
805 AliAnalysisTaskGammaConversion * taskGammaConversion = AddTaskGammaConversion(gcArguments,mgr->GetCommonInputContainer());
806 gSystem->ChangeDirectory(cdir);
121e4bd5 807 taskGammaConversion->SelectCollisionCandidates();
53c63663 808 if (!taskGammaConversion) ::Warning("AnalysisTrainNew", "AliAnalysisTaskGammaConversion cannot run for these train conditions - EXCLUDED");
809 }
810
17d96675 811 if (iPWG4CaloConv) {
812 gROOT->LoadMacro("$ALICE_ROOT/PWG4/macros/AddTaskCaloConv.C");
813 AliAnalysisTaskCaloConv * taskCaloConv = AddTaskCaloConv();
814 if (!taskCaloConv) ::Warning("AnalysisTrainNew", "AliAnalysisTaskCaloConv cannot run for these train conditions - EXCLUDED");
815 }
816
817
3878a941 818
c38e3b95 819 //==========================================================================
820 // FOR THE REST OF THE TASKS THE MACRO AddTaskXXX() is not yet implemented/
821 // Run the analysis
822 //
823 if (kPluginUse) {
824 AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
825 AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
826 }
827
828 if (mgr->InitAnalysis()) {
829 mgr->PrintStatus();
830 // if (kSaveTrain || strlen(config_file)) gSystem->ChangeDirectory(kTrainName);
e84da0a5 831 if (!strcmp(plugin_mode,"submit")&&smode=="GRID"){
c38e3b95 832 TString alien_workdir = gGrid->GetHomeDirectory();
833 if (iAODanalysis) alien_workdir += "analysisAOD";
834 else alien_workdir += "analysisESD";
3878a941 835 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
c38e3b95 836 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
e84da0a5 837 printf("=== AnalysisTrainPWG4Jets:: Registering jdl in the work directory alien://%s/%s, should be done by the manager! ===\n",
c38e3b95 838 alien_workdir.Data(),gridhandler->GetGridOutputDir());
58ef946c 839
840 TString dest;
841 dest = Form("%s/%s/%s.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
842 if(AliAnalysisAlien::FileExists(dest.Data())){
843 // Printf("%s exist on grid removing...",dest.Data());
844 // gGrid->Rm(dest.Data());
845 }
846 TFile::Cp(Form("file:%s.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
4721d8c5 847
848
849 TString dest;
850 dest = Form("%s/%s/%s_merge.jdl",alien_workdir.Data(),gridhandler->GetGridOutputDir(),kTrainName.Data());
851 if(AliAnalysisAlien::FileExists(dest.Data())){
852 // Printf("%s exist on grid removing...",dest.Data());
853 // gGrid->Rm(dest.Data());
854 }
855 TFile::Cp(Form("file:%s_merge.jdl",kTrainName.Data()),Form("alien://%s",dest.Data()));
856
58ef946c 857
73b7619a 858 dest = Form("%s/rootfiles/STEER/LQ1dRef_v1.root",gGrid->GetHomeDirectory());
58ef946c 859 if(AliAnalysisAlien::FileExists(dest.Data())){
860 Printf("%s exist on grid removing...",dest.Data());
861 gGrid->Rm(dest.Data());
862 }
863 TFile::Cp(Form("file:%s/STEER/LQ1dRef_v1.root",
9748e967 864 gSystem->ExpandPathName("$ALICE_ROOT")),Form("alien://%s",dest.Data()));
c38e3b95 865 }
3878a941 866 AliLog::SetGlobalLogLevel(AliLog::kError);
c166d299 867 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
868 TFile * fM = TFile::Open("manager_local.root","RECREATE");
869 mgr->Write();
870 fM->Close();
871 }
46534866 872
873 // grmpf, aliroot error handler overwrites root
874 gErrorIgnoreLevel = kErrorIgnoreLevel;
875 if(gErrorIgnoreLevel>3000) AliLog::SetGlobalLogLevel(AliLog::kFatal);
c38e3b95 876 StartAnalysis(smode, chain);
4a6f59cb 877 if((kUseSysInfo>0&&smode=="LOCAL")||!strcmp(plugin_mode, "test")){
878 for(int i = 0;i < mgr->GetTopTasks()->GetEntries();i++){
879 mgr->ProfileTask(i);
880 }
881 }
c38e3b95 882 if (!strcmp(plugin_mode, "offline")&&smode=="GRID"){
e84da0a5 883 // Offline mode path files
884 // PatchJDL();
d8f21f85 885 // PatchAnalysisMacro();
e84da0a5 886 }
c38e3b95 887
e84da0a5 888 if (kSaveTrain && smode=="GRID") {
889 AliAnalysisAlien *gridhandler = (AliAnalysisAlien*)mgr->GetGridHandler();
890 TString alien_workdir = gGrid->GetHomeDirectory();
891 if (iAODanalysis) alien_workdir += "analysisAOD";
3878a941 892 else alien_workdir += "analysisESD";
893 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
e84da0a5 894 // kGridOutdir = gridhandler->GetGridOutputDir();
895 printf("=== Registering ConfigTrain.C in the work directory <%s> ===\n",
c38e3b95 896 alien_workdir.Data());
e84da0a5 897 if (AliAnalysisAlien::FileExists(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data())))
898 gGrid->Rm(Form("%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
899 if (strcmp(plugin_mode, "test"))
900 TFile::Cp(Form("file:%sConfig.C",kTrainName.Data()), Form("alien://%s/%sConfig.C", alien_workdir.Data(), kTrainName.Data()));
901 }
902 }
c38e3b95 903}
904
905//______________________________________________________________________________
906void StartAnalysis(const char *mode, TChain *chain) {
907// Start analysis.
908 Int_t imode = -1;
909 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
910 if (!strcmp(mode, "LOCAL")) imode = 0;
911 if (!strcmp(mode, "PROOF")) imode = 1;
912 if (!strcmp(mode, "GRID")) imode = 2;
913 switch (imode) {
914 case 0:
915 if (!chain) {
916 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
917 return;
918 }
82ebd295 919 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
c38e3b95 920 return;
921 case 1:
922 if (!kProofDataSet.Length()) {
923 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "kProofDataSet is empty");
924 return;
925 }
926 mgr->StartAnalysis(mode, kProofDataSet, kProofEvents,kProofOffset);
927 return;
928 case 2:
929 if (kPluginUse) {
930 if (!mgr->GetGridHandler()) {
931 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Grid plugin not initialized");
932 return;
933 }
ebad39a9 934 mgr->StartAnalysis("grid",chain,kNumberOfEvents);
c38e3b95 935 } else {
936 if (!chain) {
937 ::Error("AnalysisTrainPWG4Jets.C::StartAnalysis", "Cannot create the chain");
938 return;
939 }
940 mgr->StartAnalysis(mode, chain);
ebad39a9 941 mgr->StartAnalysis(mode, chain,kNumberOfEvents);
c38e3b95 942 }
943 return;
944 }
945}
946
947//______________________________________________________________________________
948void CheckModuleFlags(const char *mode) {
949// Checks selected modules and insure compatibility
950 Int_t imode = -1;
951 if (!strcmp(mode, "LOCAL")) imode = 0;
952 if (!strcmp(mode, "PROOF")) imode = 1;
953 if (!strcmp(mode, "GRID")) imode = 2;
954
955
e84da0a5 956 if (kUseCPAR) {
957 kPluginAliRootVersion = ""; // NO aliroot if we use CPAR
958 }
c38e3b95 959
960 if (imode==1) {
961 if (!kUsePAR) {
962 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PAR files enabled due to PROOF analysis");
963 kUsePAR = kTRUE;
964 }
965 }
966 if (imode != 2) {
967 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AliEn plugin disabled since not in GRID mode");
968 kPluginUse = kFALSE;
969 }
970
971
972 if(!kIsMC){
973 // switch off anthin related to MC
974 kUseMC = 0;
975 kUseAODMC = 0;
976 kUseTR = kFALSE;
977 }
978
f4132e7d 979 // Decide if we have PbPb
1c79997e 980 if(kGridDataSet.CompareTo("LHC10h")==0||kGridDataSet.Contains("LHC10h")) {
981 Printf("Using settings for Pb+Pb");
f4132e7d 982 kIsPbPb = true;
983 }
984
985
986
c38e3b95 987 if (iAODanalysis) {
988 // AOD analysis
989 if (kUseMC)
990 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "MC usage disabled in analysis on AOD's");
991 if (kUseAODTags)
992 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "AOD tags usage disabled in analysis on AOD's");
993 kUseMC = kFALSE;
994 kUseTR = kFALSE;
995 kUseAODTags = kFALSE;
996 if (iESDfilter)
997 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "ESD filter disabled in analysis on AOD's");
998 iESDfilter = 0;
e84da0a5 999 if (iPhysicsSelection)
1000 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "Physics Selection disabled in analysis on AOD's");
1001 iPhysicsSelection = 0;
c38e3b95 1002 if (!iAODhandler) {
1003 if (iJETAN)
1004 ::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "JETAN disabled in analysis on AOD's without AOD handler");
1005 iJETAN = 0;
1006 iDIJETAN = 0;
1007 }
1008 // Disable tasks that do not work yet on AOD data
58ef946c 1009 if(iPWG4JCORRAN)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 JCORRAN disabled in analysis on AOD's");
4d62ae1a 1010 iPWG4JCORRAN = 0;
c38e3b95 1011 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
1012 iPWG4PtQAMC = 0;
1013 if( iPWG4PtQATPC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtTPC disabled in analysis on AOD's");
1014 iPWG4PtQATPC = 0;
1f329128 1015 if( iPWG4Cosmics)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Comics disabled in analysis on AOD's");
1016 iPWG4Cosmics = 0;
1017
c38e3b95 1018 if( iPWG4PtSpectra)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis on AOD's");
1019 iPWG4PtSpectra = 0;
b53f2e4f 1020 if(iPWG4KMeans)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4KMeans disabled on AOD's");
1021 iPWG4KMeans = 0;
d2e6cdd5 1022 if (iPWG4JetCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4Jetcorr disabled on AOD's");
1023 iPWG4JetCorr = 0;
c38e3b95 1024 if (iPWG4PartCorr)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4partcorr disabled on AOD's");
1025 iPWG4PartCorr = 0;
d2e6cdd5 1026 if (iPWG4CaloQA)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4CaloQA disabled on AOD's");
1027 iPWG4CaloQA = 0;
911a740f 1028 if (iPWG4Tagged)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4tagged disabled on AOD's");
1029 iPWG4Tagged = 0;
121e4bd5 1030 if (iPWG4omega3pi)
1031 ::Info("AnalysisTrainNew.C::CheckModuleFlags", "PWG4omega3pi disabled on AOD's");
1032 iPWG4omega3pi = 0;
c38e3b95 1033 if(iPWG1QASym)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG1 QA Sym disabled in analysis on AOD's");
53c63663 1034 if (iPWG4GammaConv)::Info("AnalysisPWG4Jets.C::CheckModuleFlags", "PWG4gammaconv disabled on AOD's");
1035 iPWG4GammaConv = 0;
c38e3b95 1036 iPWG1QASym = 0;
f4132e7d 1037 iCentralitySelection = 0;
c38e3b95 1038 } else {
1039 // ESD analysis
f4132e7d 1040
1041 if(kIsPbPb){
1042 iCentralitySelection = 1;
1043 }
1044
c38e3b95 1045 if (!kUseMC){
1046 kUseTR = kFALSE;
1047
1048 if(kUseKinefilter)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 Kine Filter disabled in analysis without MC");
1049 kUseKinefilter = kFALSE;
1050 if( iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 PtQAMC disabled in analysis without MC");
1051 iPWG4PtQAMC = 0;
9748e967 1052 if( iPWG4CorrectionsUE)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "PWG4 CorrectionsUE disabled in analysis without MC");
1053 iPWG4CorrectionsUE = 0;
c38e3b95 1054 }
1055 if (!kUseTR) {
c166d299 1056 if(iPWG4PtQAMC)::Info("AnalysisTrainPWG4Jets.C::CheckModuleFlags", "iPWG4QATPCMC disabled if not reading track references");
b03b08a3 1057 iPWG4PtQAMC = 0;
c38e3b95 1058 }
e84da0a5 1059 if (iJETAN){
1060 iESDfilter=1;
1061 }
c38e3b95 1062 if (!iESDfilter){
1063 kUseKinefilter = kFALSE;
1064 kUseMuonfilter = kFALSE;
1065 }
1066 if(!iJETAN){
cc636095 1067 iPWG4JetSpectrum = iPWG4UE = iPWG4CorrectionsUE = iPWG4ThreeJets = iPWG4QGSep = iDIJETAN = 0;
c38e3b95 1068 }
1069 }
cc636095 1070 iPWG4JetTasks = iPWG4JetServices||iPWG4JetSpectrum||iPWG4UE||iPWG4LeadingUE||iPWG4PtQAMC||iPWG4PtSpectra||iPWG4PtQATPC||iPWG4Cosmics||iPWG4ThreeJets||iPWG4QGSep||iPWG4JetChem||iPWG4Minijet||iPWG4Fragmentation;
d2e6cdd5 1071 iPWG4PartCorrLibs = iPWG4PartCorr||iPWG4Tagged||iPWG4CaloQA;
17d96675 1072 iPWG4GammaConvLib = iPWG4GammaConv||iPWG4CaloConv;
1073
1074
1075 iEMCUtilLibs = iPWG4PartCorrLibs||iPWG4JCORRAN||iPWG4GammaConvLib;
e6993a52 1076 iJETANLib = iPWG4JetTasks||iJETAN||iDIJETAN;
17d96675 1077
c38e3b95 1078 if (iESDfilter) {iAODhandler=1;}
1079 if (kUseKinefilter && !kUseMC) kUseKinefilter = kFALSE;
1080 if (kUseAODTags && !iAODhandler) kUseAODTags = kFALSE;
1081
1082
1083
1084}
1085
1086//______________________________________________________________________________
1087Bool_t Connect(const char *mode) {
1088// Connect <username> to the back-end system.
1089 Int_t imode = -1;
1090 if (!strcmp(mode, "LOCAL")) imode = 0;
1091 if (!strcmp(mode, "PROOF")) imode = 1;
1092 if (!strcmp(mode, "GRID")) imode = 2;
1093 TString username = gSystem->Getenv("alien_API_USER");
1094 switch (imode) {
1095 case 0:
1096 break;
1097 case 1:
1098 if (!username.Length()) {
1099 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1100 1. Have called: alien-token-init <username>\n \
1101 2. Have called: >source /tmp/gclient_env_$UID");
1102 return kFALSE;
1103 }
1104 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to PROOF cluster <%s>",
1105 username.Data(), kProofCluster.Data());
1106 gEnv->SetValue("XSec.GSI.DelegProxy", "2");
1107// TProof::Open(Form("%s@%s:31093", username.Data(), kProofCluster.Data()));
1108 TProof::Open(Form("%s@%s", username.Data(), kProofCluster.Data()));
1109 if (!gProof) {
1110 if (strcmp(gSystem->Getenv("XrdSecGSISRVNAMES"), "lxfsrd0506.cern.ch"))
1111 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Environment XrdSecGSISRVNAMES different from lxfsrd0506.cern.ch");
1112 return kFALSE;
1113 }
1114 if(kProofClearPackages)gProof->ClearPackages();
1115
1116 if(kProofSaveToAlien){
1117 TGrid::Connect("alien://");
1118 if (gGrid) {
1119 TString homedir = gGrid->GetHomeDirectory();
1120 TString workdir = homedir + kTrainName;
1121 if (!gGrid->Cd(workdir)) {
1122 gGrid->Cd(homedir);
1123 if (gGrid->Mkdir(workdir)) {
1124 gGrid->Cd(kTrainName);
1125 ::Info("AnalysisTrainPWG4Jets::Connect()", "Directory %s created", gGrid->Pwd());
1126 }
1127 }
1128 gGrid->Mkdir("proof_output");
1129 gGrid->Cd("proof_output");
1130 kProofOutdir = Form("alien://%s", gGrid->Pwd());
1131 }
1132 }
1133 break;
1134 case 2:
1135 if (!username.Length()) {
1136 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode), "Make sure you:\n \
1137 1. Have called: alien-token-init <username>\n \
1138 2. Have called: >source /tmp/gclient_env_$UID");
1139 return kFALSE;
1140 }
1141 if (kPluginUse && !gSystem->Getenv("alien_CLOSE_SE")) {
1142 ::Error(Form("AnalysisTrainPWG4Jets.C::Connect <%s>", mode),
1143 "When using the AliEn plugin it is preferable to define the \
1144 variable alien_CLOSE_SE in your environment.");
1145 return kFALSE;
1146 }
1147 ::Info("AnalysisTrainPWG4Jets.C::Connect", "Connecting user <%s> to AliEn ...",
1148 username.Data());
1149 TGrid::Connect("alien://");
1150 if (!gGrid || !gGrid->IsConnected()) return kFALSE;
1151 break;
1152 default:
1153 ::Error("AnalysisTrainPWG4Jets.C::Connect", "Unknown run mode: %s", mode);
1154 return kFALSE;
1155 }
1156 ::Info("AnalysisTrainPWG4Jets.C::Connect","Connected in %s mode", mode);
1157 return kTRUE;
1158}
1159
1160//______________________________________________________________________________
1161Bool_t LoadCommonLibraries(const char *mode)
1162{
1163// Load common analysis libraries.
1164 Int_t imode = -1;
1165 if (!strcmp(mode, "LOCAL")) imode = 0;
1166 if (!strcmp(mode, "PROOF")) imode = 1;
1167 if (!strcmp(mode, "GRID")) imode = 2;
1168 if (!gSystem->Getenv("ALICE_ROOT")) {
ebad39a9 1169 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Analysis train requires that ALICE_ROOT is set to pick up Configurations");
c38e3b95 1170 return kFALSE;
1171 }
1172 Bool_t success = kTRUE;
1173 // ROOT libraries
1174 gSystem->Load("libTree.so");
1175 gSystem->Load("libGeom.so");
1176 gSystem->Load("libVMC.so");
1177 gSystem->Load("libPhysics.so");
1178
1179 // Load framework classes. Par option ignored here.
1180 switch (imode) {
1181 case 0:
1182 case 2:
1183 if (kUseCPAR) {
1184 success &= LoadLibrary("STEERBase", mode, kTRUE);
1185 success &= LoadLibrary("ESD", mode, kTRUE);
1186 success &= LoadLibrary("AOD", mode, kTRUE);
1187 success &= LoadLibrary("ANALYSIS", mode, kTRUE);
1188 success &= LoadLibrary("ANALYSISalice", mode, kTRUE);
d8f21f85 1189 success &= LoadLibrary("ROOTFILES", mode, kTRUE);
070f06d2 1190 success &= LoadLibrary("EventMixing", mode,kTRUE);
c38e3b95 1191 success &= LoadLibrary("CORRFW", mode, kTRUE);
1192 } else {
1193 success &= LoadLibrary("libSTEERBase.so", mode);
1194 success &= LoadLibrary("libESD.so", mode);
1195 success &= LoadLibrary("libAOD.so", mode);
1196 success &= LoadLibrary("libANALYSIS.so", mode);
1197 success &= LoadLibrary("libANALYSISalice.so", mode);
070f06d2 1198 success &= LoadLibrary("libEventMixing.so", mode);
c38e3b95 1199 success &= LoadLibrary("libCORRFW.so", mode);
1200 gROOT->ProcessLine(".include $ALICE_ROOT/include");
1201 }
1202 break;
1203 case 1:
1204 Int_t ires = -1;
1205 if (kProofUseAFPAR && !gSystem->AccessPathName(kProofAFversion)) ires = gProof->UploadPackage(kProofAFversion);
1206 if (ires < 0) {
1207 success &= LoadLibrary("STEERBase", mode);
1208 success &= LoadLibrary("ESD", mode);
1209 success &= LoadLibrary("AOD", mode);
1210 success &= LoadLibrary("ANALYSIS", mode);
1211 success &= LoadLibrary("ANALYSISalice", mode);
070f06d2 1212 success &= LoadLibrary("EventMixing", mode);
c38e3b95 1213 success &= LoadLibrary("CORRFW", mode);
1214 } else {
1215 ires = gProof->EnablePackage(kProofAFversion);
1216 if (ires<0) success = kFALSE;
1217 success &= LoadLibrary("CORRFW", mode);
1218 }
1219 break;
1220 default:
1221 ::Error("AnalysisTrainPWG4Jets.C::LoadCommonLibraries", "Unknown run mode: %s", mode);
1222 return kFALSE;
1223 }
1224 if (success) {
1225 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: SUCCESS");
1226 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Include path for Aclic compilation:\n%s",
1227 gSystem->GetIncludePath());
1228 } else {
1229 ::Info("AnalysisTrainPWG4Jets.C::LoadCommodLibraries", "Load common libraries: FAILED");
1230 }
1231
1232 return success;
1233}
1234
1235//______________________________________________________________________________
1236Bool_t LoadAnalysisLibraries(const char *mode)
1237{
1238// Load common analysis libraries.
9748e967 1239 Bool_t success = kTRUE;
cfd02305 1240 if (useTender) {
1241 if (!LoadLibrary("TENDER", mode, kTRUE) ||
1242 !LoadLibrary("TENDERSupplies", mode, kTRUE)) return kFALSE;
1243 }
c38e3b95 1244 if (iESDfilter) {
b0a36f28 1245 /*
c38e3b95 1246 if (!LoadLibrary("PWG3base", mode, kTRUE) ||
1247 !LoadLibrary("PWG3muon", mode, kTRUE)) return kFALSE;
b0a36f28 1248 */
c38e3b95 1249 }
1250 // JETAN
e6993a52 1251 if (iJETANLib) {
b53f2e4f 1252 // this part needs some rework in case we do not need the fastjed finders for processing
1253 if (!LoadLibrary("JETAN", mode, kTRUE)) return kFALSE;
c38e3b95 1254 if (!strcmp(mode, "PROOF")){
ef1e462f 1255 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libCGAL.so\"\)", kTRUE);
c38e3b95 1256 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libfastjet.so\"\)", kTRUE);
1257 // problem when loading siscone copiled with different gcc version??
1258 // gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libsiscone.so\"\)", kTRUE);
1259 gProof->Exec("gSystem->Load\(\"/afs/cern.ch/user/d/dperrino/public/libSISConePlugin.so\"\)", kTRUE);
1260 }
b53f2e4f 1261 if(!kUsePAR){
e84da0a5 1262 if (!LoadLibrary("CGAL", mode, kTRUE)) return kFALSE;
1263 if (!LoadLibrary("fastjet", mode, kTRUE)) return kFALSE;
1264 if (!LoadLibrary("siscone", mode, kTRUE)) return kFALSE;
1265 if (!LoadLibrary("SISConePlugin", mode, kTRUE)) return kFALSE;
1266 }
1267 else{
1268 // par files plus FASTJET needs some extra work... need to change
1269 // the loading sequence in the auto generated .C file
1270 if (!LoadLibrary("libCGAL.so", mode, kTRUE)) return kFALSE;
1271 if (!LoadLibrary("libfastjet.so", mode, kTRUE)) return kFALSE;
1272 if (!LoadLibrary("libsiscone.so", mode, kTRUE)) return kFALSE;
1273 if (!LoadLibrary("libSISConePlugin.so", mode, kTRUE)) return kFALSE;
1274 }
c38e3b95 1275 if (!LoadLibrary("FASTJETAN", mode, kTRUE)) return kFALSE;
1276 }
1277 if(iPWG4JetTasks){
c38e3b95 1278 if (!LoadLibrary("PWG4JetTasks", mode, kTRUE)) return kFALSE;
1279 }
58ef946c 1280
c38e3b95 1281 if(iPWG1QASym){
99bfd7f7 1282 if (!LoadSource(Form("%s/PWG1/AliAnalysisTaskQASym.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
c38e3b95 1283 }
121e4bd5 1284 if(iPWG4TmpSourceSara){
c166d299 1285 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
121e4bd5 1286 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskEta.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1287 }
58ef946c 1288
9f77f0ce 1289 /*
1290 if(iPWG4JetChem){
c580ebbb 1291 if(!kUsePAR)gSystem->AddIncludePath("-I$ALICE_ROOT/include/JetTasks"); // ugly hack!!
1292 if(!LoadSource(Form("%s/PWG4/JetTasks/AliAnalysisTaskJetChem.cxx",gSystem->ExpandPathName("$ALICE_ROOT")), mode, kTRUE))return kFALSE;
1293 }
9f77f0ce 1294 */
c166d299 1295
4721d8c5 1296 if(iEMCUtilLibs){
1297 if (!LoadLibrary("EMCALUtils", mode, kTRUE) ||
1298 !LoadLibrary("PHOSUtils", mode, kTRUE)) return kFALSE;
1299 }
1300
911a740f 1301 if (iPWG4PartCorrLibs) {
4721d8c5 1302 if (!LoadLibrary("PWG4PartCorrBase", mode, kTRUE) ||
c38e3b95 1303 !LoadLibrary("PWG4PartCorrDep", mode, kTRUE)) return kFALSE;
1304 }
4721d8c5 1305 if(iPWG4JCORRAN){
1306 // PWG4 particle correlations
1307 if(!LoadLibrary("PWG4JCORRAN",mode,kTRUE))return kFALSE;
1308 }
d2e6cdd5 1309 if (iPWG4JetCorr) {
1310 if (!LoadLibrary("PWG4JetCorrel", mode, kTRUE)) return kFALSE;
1311 }
121e4bd5 1312 if (iPWG4omega3pi) {
1313 if (!LoadLibrary("PWG4omega3pi", mode, kTRUE)) return kFALSE;
1314 }
17d96675 1315 if (iPWG4GammaConvLib) {
53c63663 1316 if (!LoadLibrary("PWG4GammaConv", mode, kTRUE)) return kFALSE;
1317 }
c38e3b95 1318
1319 ::Info("AnalysisTrainPWG4Jets.C::LoadAnalysisLibraries", "Load other libraries: SUCCESS");
1320 return kTRUE;
1321}
1322
1323//______________________________________________________________________________
1324Bool_t LoadLibrary(const char *module, const char *mode, Bool_t rec=kFALSE)
1325{
1326// Load a module library in a given mode. Reports success.
1327 Int_t imode = -1;
1328 Int_t result;
1329 TString smodule(module);
1330 if (!strcmp(mode, "LOCAL")) imode = 0;
1331 if (!strcmp(mode, "PROOF")) imode = 1;
1332 if (!strcmp(mode, "GRID")) imode = 2;
1333 TString mod(module);
1334 if (!mod.Length()) {
1335 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Empty module name");
1336 return kFALSE;
1337 }
1338 // If a library is specified, just load it
1339 if (smodule.EndsWith(".so")) {
1340 mod.Remove(mod.Index(".so"));
1341 result = gSystem->Load(mod);
1342 if (result < 0) {
1343 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load library %s", module);
1344 return kFALSE;
1345 }
1346 if (rec) anaLibs += Form("%s.so ",mod.Data());
e84da0a5 1347 if (rec) anaLibsExtra += Form("%s.so ",mod.Data());
c38e3b95 1348 return kTRUE;
1349 }
1350 // Check if the library is already loaded
1351 if (strlen(gSystem->GetLibraries(Form("%s.so", module), "", kFALSE)) > 0)
1352 return kTRUE;
1353 switch (imode) {
1354 case 0:
1355 case 2:
1356 if (kUsePAR) {
1357 result = SetupPar(module);
1358 if (rec) anaPars += Form("%s.par ", module);
1359 } else {
1360 result = gSystem->Load(Form("lib%s.so", module));
1361 if (rec) anaLibs += Form("lib%s.so ", module);
1362 }
1363 break;
1364 case 1:
1365 if(!gSystem->AccessPathName(module)){
1366 ::Info("AnalysisTrainPWG4Jets.C::LoadLibrary", "Removing directory %s",module);
1367 gSystem->Exec(Form("rm -rf %s",module));
1368 }
1369 result = gProof->UploadPackage(module);
1370 if (result<0) {
1371 result = gProof->UploadPackage(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", module)));
1372 if (result<0) {
1373 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not find module %s.par in current directory nor in $ALICE_ROOT", module);
1374 return kFALSE;
1375 }
1376 }
1377 result = gProof->EnablePackage(module);
1378 break;
1379 default:
1380 return kFALSE;
1381 }
1382 if (result < 0) {
1383 ::Error("AnalysisTrainPWG4Jets.C::LoadLibrary", "Could not load module %s", module);
1384 return kFALSE;
1385 }
1386 return kTRUE;
1387}
1388
1389
1390
1391//______________________________________________________________________________
1392Bool_t LoadSource(const char *source, const char *mode, Bool_t rec=kFALSE)
1393{
1394// Load a module library in a given mode. Reports success.
1395 Int_t imode = -1;
1396 Int_t result = -1;
1397 if (!strcmp(mode, "LOCAL")) imode = 0;
1398 if (!strcmp(mode, "PROOF")) imode = 1;
1399 if (!strcmp(mode, "GRID")) imode = 2;
1400 TString ssource(source);
1401 TString basename = gSystem->BaseName(ssource.Data());
1402 if (!ssource.Length()) {
1403 ::Error("AnalysisTrainPWG4Jets.C::LoadSource", "Empty task name");
1404 return kFALSE;
1405 }
4d62ae1a 1406 // we have a source code so compile it
c38e3b95 1407 if (ssource.EndsWith(".cxx")) {
1408 // need to copy it here other wise the path is also used on grid...
1409 ssource.Remove(ssource.Index(".cxx"));
1410 basename.Remove(basename.Index(".cxx"));
1411 Printf("LoadSources:: Copying... path %s{cxx,h}",ssource.Data());
1412 gSystem->Exec(Form("cp %s.cxx . ",ssource.Data()));
1413 gSystem->Exec(Form("cp %s.h . ",ssource.Data()));
1414 // Path to code
1415 // only needed for local compilation, in grid and proof mode
1416 // the task headers are uploaded
1417 // path.Remove(path.Index(gSystem->BaseName(path.Data())));
1418 // Printf("LoadSources:: Including path %s",path.Data());
1419 // if(path.Length()>0)gROOT->ProcessLine(Form(".include %s",path.Data()));
1420 Printf("LoadSources:: Loading... path %s",basename.Data());
1421 switch (imode) {
1422 case 0:
b53f2e4f 1423 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1424 break;
1425 case 1:
b53f2e4f 1426 result = gProof->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1427 break;
1428 case 2:
b53f2e4f 1429 result = gROOT->LoadMacro(Form("%s.cxx++g",basename.Data()));
c38e3b95 1430 if (rec){
1431 // what we want to compile
1432 anaSources += Form("%s.cxx ",basename.Data());
1433 // what we need as input...
1434 anaLibs += Form("%s.cxx %s.h ",basename.Data(),basename.Data());
1435 }
1436 break;
1437 default:
1438 return kFALSE;
1439 }
1440 }
1441 if (result < 0) {
1442 ::Error("AnalysisTrainPWG4Jets.C::LoadSources", "Could not load source %s", source);
1443 return kFALSE;
1444 }
1445 return kTRUE;
1446}
1447
1448
1449//______________________________________________________________________________
1450TChain *CreateChain(const char *mode, const char *plugin_mode)
1451{
1452// Create the input chain
1453 Int_t imode = -1;
1454 if (!strcmp(mode, "LOCAL")) imode = 0;
1455 if (!strcmp(mode, "PROOF")) imode = 1;
1456 if (!strcmp(mode, "GRID")) imode = 2;
1457 TChain *chain = NULL;
1458 // Local chain
1459 switch (imode) {
1460 case 0:
1461 if (iAODanalysis) {
1462 if (!kLocalXMLDataset.Length()) {
1463 // Local AOD
1464 chain = new TChain("aodTree");
1465 TString line;
1466 ifstream in;
1467 in.open(kLocalDataList.Data());
1468 while (in.good()) {
1469 in >> line;
1470 if (line.Length() == 0) continue;
1471 // cout << " line = " << line << endl;
1472 chain->Add(line.Data());
1473 }
1474 } else {
1475 // Interactive AOD
1476 chain = CreateChainSingle(kLocalXMLDataset, "aodTree");
1477 }
1478 } else {
1479 if (!kLocalXMLDataset.Length()) {
1480 // Local ESD
1481 chain = new TChain("esdTree");
1482 TString line;
1483 ifstream in;
1484 in.open(kLocalDataList.Data());
1485 while (in.good()) {
1486 in >> line;
1487 if (line.Length() == 0) continue;
1488 cout << " line = " << line << endl;
1489 chain->Add(line.Data());
1490 }
1491 } else {
1492 // Interactive ESD
1493 chain = CreateChainSingle(kLocalXMLDataset, "esdTree");
1494 }
1495 }
1496 break;
1497 case 1:
1498 break;
1499 case 2:
1500 if (kPluginUse) {
1501// AliAnalysisGrid *alienHandler = CreateAlienHandler(plugin_mode);
1502// AliAnalysisManager::GetAnalysisManager()->SetGridHandler(alienHandler);
1503 } else {
1504 TString treeName = "esdTree";
1505 if (iAODanalysis) treeName = "aodTree";
1506 chain = CreateChainSingle("wn.xml", treeName);
1507 }
1508 break;
1509 default:
1510 }
1511 if (chain && chain->GetNtrees()) return chain;
1512 return NULL;
1513}
1514
1515//______________________________________________________________________________
1516TChain* CreateChainSingle(const char* xmlfile, const char *treeName)
1517{
1518 printf("*******************************\n");
1519 printf("*** Getting the ESD Chain ***\n");
1520 printf("*******************************\n");
1521 TAlienCollection * myCollection = TAlienCollection::Open(xmlfile);
1522
1523 if (!myCollection) {
1524 ::Error("AnalysisTrainPWG4Jets.C::CreateChainSingle", "Cannot create an AliEn collection from %s", xmlfile) ;
1525 return NULL ;
1526 }
1527
1528 TChain* chain = new TChain(treeName);
1529 myCollection->Reset() ;
1530 while ( myCollection->Next() ) chain->Add(myCollection->GetTURL("")) ;
1531 chain->ls();
1532 return chain;
1533}
1534
1535//______________________________________________________________________________
1536Int_t SetupPar(char* pararchivename)
1537{
1538 if (!pararchivename || !strlen(pararchivename)) return -1;
1539 char processline[1024];
1540 if (gSystem->AccessPathName(Form("%s.par", pararchivename))) {
1541 if (!gSystem->AccessPathName(Form("%s/%s.par", gSystem->Getenv("ALICE_ROOT"),pararchivename))) {
1542 ::Info("AnalysisTrainPWG4Jets.C::SetupPar", "Getting %s.par from $ALICE_ROOT", pararchivename);
9748e967 1543 TFile::Cp(gSystem->ExpandPathName(Form("$ALICE_ROOT/%s.par", pararchivename)),
1544 Form("%s.par",pararchivename));
c38e3b95 1545 } else {
1546 ::Error("AnalysisTrainPWG4Jets.C::SetupPar", "Cannot find %s.par", pararchivename);
1547 return -1;
1548 }
1549 }
1550 if (kPluginUse && kSaveTrain) gSystem->Exec(Form("ln -s ../%s.par %s",pararchivename, kTrainName.Data()));
1551 gSystem->Exec(Form("tar xvzf %s.par", pararchivename));
1552
1553 TString ocwd = gSystem->WorkingDirectory();
1554 if (!gSystem->ChangeDirectory(pararchivename)) return -1;
1555
1556 // check for BUILD.sh and execute
1557 if (!gSystem->AccessPathName("PROOF-INF/BUILD.sh")) {
1558 printf("*******************************\n");
1559 printf("*** Building PAR archive ***\n");
1560 printf("*******************************\n");
1561 if (gSystem->Exec("PROOF-INF/BUILD.sh")) {
1562 Error("runProcess","Cannot Build the PAR Archive! - Abort!");
1563 return -1;
1564 }
1565 }
1566
1567 // check for SETUP.C and execute
1568 if (!gSystem->AccessPathName("PROOF-INF/SETUP.C")) {
1569 printf("*******************************\n");
1570 printf("*** Setup PAR archive ***\n");
1571 printf("*******************************\n");
1572 gROOT->Macro("PROOF-INF/SETUP.C");
1573 }
1574 if (!gSystem->ChangeDirectory(ocwd.Data())) return -1;
1575 return 0;
1576}
1577
1578//______________________________________________________________________________
1579AliAnalysisAlien* CreateAlienHandler(const char *plugin_mode)
1580{
1581// Check if user has a valid token, otherwise make one. This has limitations.
1582// One can always follow the standard procedure of calling alien-token-init then
1583// source /tmp/gclient_env_$UID in the current shell.
c8fb37dd 1584// if (!AliAnalysisGrid::CreateToken()) return NULL;
c38e3b95 1585 AliAnalysisAlien *plugin = new AliAnalysisAlien();
1586// Set the run mode (can be "full", "test", "offline", "submit" or "terminate")
1587 plugin->SetRunMode(plugin_mode);
1588 if (kPluginUseProductionMode) plugin->SetProductionMode();
1589 plugin->SetJobTag(kJobTag);
d8f21f85 1590 plugin->SetNtestFiles(1);
c38e3b95 1591// plugin->SetPreferedSE("ALICE::NIHAM::File");
1592// Set versions of used packages
e84da0a5 1593 plugin->SetAPIVersion("V1.1x");
1594 // plugin->SetAPIVersion("V1.0x");
1595// plugin->SetAPIVersion("V2.4");
c38e3b95 1596 plugin->SetROOTVersion(kPluginRootVersion);
1597 plugin->SetAliROOTVersion(kPluginAliRootVersion);
1598// Declare input data to be processed.
1599// Method 1: Create automatically XML collections using alien 'find' command.
1600// Define production directory LFN
1601 plugin->SetGridDataDir(kGridDatadir.Data());
1602// Set data search pattern
d8f21f85 1603 if (iAODanalysis) plugin->SetDataPattern(" *AliAOD.Jets.root");
c8fb37dd 1604 // else plugin->SetDataPattern(Form(" %s/*/*ESD.tag.root",kGridPassPattern.Data()));
1605 else plugin->SetDataPattern(Form(" %s/*/*AliESDs.root",kGridPassPattern.Data()));
c38e3b95 1606// ...then add run numbers to be considered
1607// plugin->SetRunRange(kGridRunRange[0], kGridRunRange[1]);
1608 for (Int_t i=kGridRunRange[0]; i<=kGridRunRange[1]; i++) {
1609 Printf("AnalysisTrainPWG4Jets Adding run number %s", Form(kGridRunPattern.Data(),i));
1610 plugin->AddRunNumber(Form(kGridRunPattern.Data(),i));
1611 }
1612
1613 if(kGridLocalRunList.Length()>0){
1614 ifstream in1;
1615 in1.open(kGridLocalRunList.Data());
1616 int iRun;
4d16db9c 1617 int icount = 0;
9a5c5b1e 1618 /*
e84da0a5 1619 char c;
1620 char cLine[250];
1621 while(!in1.eof()){
1622 c = in1.get();
1623 if ( (c >= '0') && (c <= '9') )
1624 {
d8f21f85 1625 in1.putback (c)s;
e84da0a5 1626 in1>>iRun;
1627 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1628 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
1629 }
1630 else
1631 {
1632 in1.putback (c);
1633 in1.getline(cLine,250);
9a5c5b1e 1634
1635 }
1636 }
1637 */
9748e967 1638
1639 Int_t nRun = 0;
9a5c5b1e 1640
1641 // just use run numbers, negatives will be excluded
1642 while(in1>>iRun){
ffab794c 1643 if(iRun>=0){
1644 if(iRun>=0&&nRun>=kGridOffsetRunFromList&&(nRun<kGridMaxRunsFromList)){
9a5c5b1e 1645 Printf("AnalysisTrainPWG4Jets Adding run number from File %s", Form(kGridRunPattern.Data(),iRun));
1646 plugin->AddRunNumber(Form(kGridRunPattern.Data(),iRun));
ffab794c 1647
1648 }
1649 else{
1650 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d", iRun);
1651 }
36c36a0c 1652 nRun++;
9a5c5b1e 1653 }
1654 else{
1655 Printf("AnalysisTrainPWG4Jets Skipping run number from File %d", iRun);
e84da0a5 1656 }
c38e3b95 1657 }
1658 }
1659
1660// Method 2: Declare existing data files (raw collections, xml collections, root file)
1661// If no path mentioned data is supposed to be in the work directory (see SetGridWorkingDir())
1662// XML collections added via this method can be combined with the first method if
1663// the content is compatible (using or not tags)
1664// plugin->AddDataFile("tag.xml");
1665// plugin->AddDataFile("/alice/data/2008/LHC08c/000057657/raw/Run57657.Merged.RAW.tag.root");
1666// Define alien work directory where all files will be copied. Relative to alien $HOME.
3878a941 1667 TString alien_workdir = "";
1668
1669 if (iAODanalysis) alien_workdir += "analysisAOD";
1670 else alien_workdir += "analysisESD";
1671 if(kGridDataSet.Length()>0)alien_workdir += Form("/%s",kGridDataSet.Data());
1672 plugin->SetGridWorkingDir(alien_workdir.Data());
1673
c38e3b95 1674 // Declare alien output directory. Relative to working directory.
1675 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
1676 plugin->SetGridOutputDir(kGridOutdir);
1677
1678 // Add external packages
1679 if (iJETAN||iDIJETAN) {
23adcac8 1680 plugin->AddExternalPackage("boost::v1_43_0");
1681 plugin->AddExternalPackage("cgal::v3.6");
1682 plugin->AddExternalPackage("fastjet::v2.4.2");
c38e3b95 1683 }
1684
1685
1686 // set extra libs before par file compilation
1687 anaLibs += kGridExtraFiles;
1688 anaLibs = anaLibs.Strip();
e84da0a5 1689 Printf("anaLibs %s",anaLibs.Data());
1690 Printf("anaLibsExtra %s",anaLibsExtra.Data());
1691
1692 if (anaLibs.Length()) plugin->SetAdditionalLibs(anaLibs.Data());
1693 if (anaLibsExtra.Length()) plugin->SetAdditionalRootLibs(anaLibsExtra.Data());
c38e3b95 1694
1695 TString ana_sources = "";
1696 TString ana_add = "";
1697 if (kUsePAR && anaPars.Length()) {
1698 printf("%s\n", anaPars.Data());
1699 TObjArray *arr;
1700 TObjString *objstr;
1701 arr = anaPars.Tokenize(" ");
1702 TIter next(arr);
1703 while ((objstr=(TObjString*)next())) plugin->EnablePackage(objstr->GetString());
1704 delete arr;
1705 }
1706
1707// Declare the analysis source files names separated by blancs. To be compiled runtime
1708// using ACLiC on the worker nodes.
1709 ana_sources = anaSources.Strip();
1710// Declare all libraries (other than the default ones for the framework. These will be
1711// loaded by the generated analysis macro. Add all extra files (task .cxx/.h) here.
1712
1713 if (ana_sources.Length()) plugin->SetAnalysisSource(ana_sources);
1714 plugin->SetExecutableCommand(kPluginExecutableCommand.Data());
4721d8c5 1715 // Declare the output file names separated by blancs.
1716 // (can be like: file.root or file.root@ALICE::Niham::File)
c38e3b95 1717 plugin->SetMergeExcludes(kGridMergeExclude);
1718 plugin->SetMaxMergeFiles(kGridMaxMergeFiles);
1719 plugin->SetNrunsPerMaster(kGridRunsPerMaster);
9a5c5b1e 1720 plugin->SetMergeViaJDL(kPluginMergeViaJDL);
4721d8c5 1721 // Use fastread option
9a5c5b1e 1722 plugin->SetFastReadOption(kPluginFastReadOption);
4721d8c5 1723 // UseOverwrite mode
9a5c5b1e 1724 plugin->SetOverwriteMode(kPluginOverwriteMode);
4721d8c5 1725 // Optionally define the files to be archived.
1726 // plugin->SetOutputArchive("log_archive.zip:stdout,stderr@ALICE::NIHAM::File root_archive.zip:AliAOD.root,AOD.tag.root@ALICE::NIHAM::File");
dc6a7461 1727 plugin->SetOutputToRunNo(kPluginOutputToRunNumber); // write the output to subdirs named after run number
c38e3b95 1728
1729 // Put default output files to archive
1730 TString listhists = "";
1731 TString listaods = "";
1732 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1733 TIter next(mgr->GetOutputs());
1734 AliAnalysisDataContainer *output;
1735 while ((output=(AliAnalysisDataContainer*)next())) {
1736 const char *filename = output->GetFileName();
1737 if (!(strcmp(filename, "default"))) {
53c63663 1738 if (!mgr->GetOutputEventHandler()) continue;
c38e3b95 1739 filename = mgr->GetOutputEventHandler()->GetOutputFileName();
e84da0a5 1740 if (listaods.Length()) listaods += " ";
c38e3b95 1741 listaods += filename;
c38e3b95 1742 } else {
e84da0a5 1743 if(!listhists.Contains(filename)){
1744 if (listhists.Length()) listhists += " ";
c38e3b95 1745 listhists += filename;
1746 }
1747 }
1748 }
53c63663 1749
53c63663 1750 if (mgr->GetExtraFiles().Length()) {
e84da0a5 1751 if (listaods.Length()) listaods += " ";
53c63663 1752 listaods += mgr->GetExtraFiles();
c38e3b95 1753 }
53c63663 1754
1755 // if we do not fill the aod we do not need to store it
4721d8c5 1756 // kGridMergeExclude = listaods;
e84da0a5 1757
e2afec0c 1758 if(kSaveAOD>=0){
4721d8c5 1759 TString outputFiles = "";
1760 outputFiles += mgr->GetExtraFiles();
1761 if (listhists.Length()) outputFiles += " ";
1762 outputFiles += listhists;
e84da0a5 1763 plugin->SetDefaultOutputs(kFALSE);
4721d8c5 1764 Printf("%s:%d Starting with the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
1765 // remove
1766 // no harm done when we try to remove something that is not there :)
1767 if(!(kSaveAOD&(1<<0))){
1768 outputFiles.ReplaceAll("AliAOD.root ","");
1769 listaods.ReplaceAll("AliAOD.root ","");
1770 }
1771 if(!(kSaveAOD&(1<<1))){
1772 if(kDeltaAODJetName.Length())outputFiles.ReplaceAll(kDeltaAODJetName.Data(),"");
1773 if(kDeltaAODJetName.Length())listaods.ReplaceAll(kDeltaAODJetName.Data(),"");
1774
1775 }
1776 if(!(kSaveAOD&(1<<2))){
1777 if(kDeltaAODPartCorrName.Length())outputFiles.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
1778 if(kDeltaAODPartCorrName.Length())listaods.ReplaceAll(kDeltaAODPartCorrName.Data(),"");
1779 }
1780 if(!(kSaveAOD&(1<<3))){
1781 if(kDeltaAODJCORRANName.Length())outputFiles.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
1782 if(kDeltaAODJCORRANName.Length())listaods.ReplaceAll(kDeltaAODJCORRANName.Data(),"");
1783 }
1784
1785 //
e2afec0c 1786 plugin->SetDefaultOutputs(kFALSE);
4721d8c5 1787 Printf("%s:%d Saving the files %s",(char*)__FILE__,__LINE__,outputFiles.Data());
1788 plugin->SetOutputFiles(outputFiles.Data());
e84da0a5 1789 }
53c63663 1790
4721d8c5 1791 TString outputArchive;
4d5d766e 1792 outputArchive = Form("log_archive.zip:std*@%s","disk=1");
e84da0a5 1793 listaods.ReplaceAll(" ", ",");
1794 listhists.ReplaceAll(" ", ",");
4d5d766e 1795 if (listhists.Length()){
1796 outputArchive += " ";
1797 outputArchive += "root_archive.zip:";
1798 outputArchive += listhists;
1799 if (listaods.Length()){
1800 outputArchive += ",";
1801 outputArchive += listaods;
1802 }
1803 outputArchive += Form("@%s", kGridOutputStorages.Data());
1804 }
1805 else{
1806
1807 if (listaods.Length()){
1808 // we have only aod'ish output
1809 outputArchive += " ";
1810 outputArchive += "root_archive.zip:";
1811 outputArchive += listaods;
1812 outputArchive += Form("@%s", kGridOutputStorages.Data());
1813 }
1814 else{
1815 // no other outputs than std..
c38e3b95 1816 ::Fatal("AnalysisTrainPWG4Jets", "No task output !");
4d5d766e 1817 }
c38e3b95 1818 }
4d5d766e 1819
17d96675 1820 plugin->SetDefaultOutputs(kFALSE);
c38e3b95 1821 plugin->SetOutputArchive(outputArchive);
17d96675 1822
4721d8c5 1823
4d5d766e 1824 // Optionally set a name for the generated analysis macro (default MyAnalysis.C)
c38e3b95 1825 plugin->SetAnalysisMacro(Form("%s.C", kTrainName.Data()));
4d5d766e 1826 // Optionally set maximum number of input files/subjob (default 100, put 0 to ignore)
c38e3b95 1827 plugin->SetSplitMaxInputFileNumber(kGridFilesPerJob);
4d5d766e 1828 // Optionally set number of failed jobs that will trigger killing waiting sub-jobs.
27cdf9c4 1829 // plugin->SetMaxInitFailed(5);
4d5d766e 1830 // Optionally resubmit threshold.
c8fb37dd 1831 // plugin->SetMasterResubmitThreshold(90);
4d5d766e 1832 // Optionally set time to live (default 30000 sec)
d4e8abc5 1833 plugin->SetTTL(54000); // 15h...
4d5d766e 1834 // Optionally set input format (default xml-single)
c38e3b95 1835 plugin->SetInputFormat("xml-single");
4d5d766e 1836 // Optionally modify the name of the generated JDL (default analysis.jdl)
c38e3b95 1837 plugin->SetJDLName(Form("%s.jdl", kTrainName.Data()));
4d5d766e 1838 // Optionally modify the executable name (default analysis.sh)
c38e3b95 1839 plugin->SetExecutable(Form("%s.sh", kTrainName.Data()));
4d5d766e 1840 // Optionally modify job price (default 1)
c38e3b95 1841 plugin->SetPrice(1);
4d5d766e 1842 // Optionally modify split mode (default 'se')
c38e3b95 1843 plugin->SetSplitMode("se");
1844 return plugin;
1845}
1846
1847//______________________________________________________________________________
1848void WriteConfig()
1849{
1850// Write train configuration in a file. The file name has the format:
1851// train_[trainName]_ddMonthyyyy_time.C
1852 if (kUseDate) {
1853 gSystem->Exec("date +%d%b%Y_%Hh%M > date.tmp");
1854 ifstream fdate("date.tmp");
1855 if (!fdate.is_open()) {
1856 ::Error("AnalysisTrainPWG4Jets.C::Export","Could not generate file name");
1857 return;
1858 }
1859 const char date[64];
1860 fdate.getline(date,64);
1861 fdate.close();
1862 gSystem->Exec("rm date.tmp");
1863 kTrainName = Form("train_%s_%s", kTrainName.Data(), date);
1864 } else {
1865 kTrainName = Form("train_%s", kTrainName.Data());
1866 }
1867 TString cdir = gSystem->WorkingDirectory();
1868 gSystem->MakeDirectory(kTrainName);
1869 gSystem->ChangeDirectory(kTrainName);
1870 ofstream out;
1871 out.open(Form("%sConfig.C",kTrainName.Data()), ios::out);
1872 if (out.bad()) {
1873 ::Error("AnalysisTrainPWG4Jets.C::Export", "Cannot open ConfigTrain.C for writing");
1874 return;
1875 }
1876 out << "{" << endl;
1877 out << " kTrainName = " << "\"" << kTrainName.Data() << "\";" << endl;
1878 out << " kProofCluster = " << "\"" << kProofCluster.Data() << "\";" << endl;
1879 out << " kProofUseAFPAR = " << kProofUseAFPAR << ";" << endl;
1880 if (kProofUseAFPAR)
1881 out << " kProofAFversion = " << kProofAFversion.Data() << ";" << endl;
1882 out << " kProofDataSet = " << "\"" << kProofDataSet.Data() << "\";" << endl;
1883 out << " kPluginUse = " << kPluginUse << ";" << endl;
1884 out << " kUsePAR = " << kUsePAR << ";" << endl;
1885 out << " kUseCPAR = " << kUseCPAR << ";" << endl;
1886 out << " kPluginRootVersion = " << "\"" << kPluginRootVersion.Data() << "\";" << endl;
1887 out << " kPluginAliRootVersion = " << "\"" << kPluginAliRootVersion.Data() << "\";" << endl;
1888 out << " kGridDatadir = " << "\"" << kGridDatadir.Data() << "\";" << endl;
1889 if (!kGridOutdir.Length()) kGridOutdir = Form("output_%s",kTrainName.Data());
1890 out << " kGridOutdir = " << "\"" << kGridOutdir.Data() << "\";" << endl;
1891 out << " kGridMaxMergeFiles = " << kGridMaxMergeFiles << ";" << endl;
1892 out << " kGridMergeExclude = " << "\"" << kGridMergeExclude.Data() << "\";" << endl;
1893 out << " kGridRunsPerMaster = " << kGridRunsPerMaster << ";" << endl;
1894 out << " kGridFilesPerJob = " << kGridFilesPerJob << ";" << endl;
1895 out << " kGridRunRange[0] = " << kGridRunRange[0] << ";" << endl;
1896 out << " kGridRunRange[1] = " << kGridRunRange[1] << ";" << endl;
1897 out << " kUseDebug = " << kUseDebug << ";" << endl;
1898 out << " kUseMC = " << kUseMC << ";" << endl;
1899 out << " kUseESDTags = " << kUseESDTags << ";" << endl;
1900 out << " kUseKinefilter = " << kUseKinefilter << ";" << endl;
1901 out << " kUseTR = " << kUseTR << ";" << endl;
1902 out << " kUseAODTags = " << kUseAODTags << ";" << endl;
1903 out << " kSaveTrain = " << "kFALSE;" << endl << endl;
1904 out << " // Analysis modules" << endl;
1905 out << " iAODanalysis = " << iAODanalysis << ";" << endl;
1906 out << " iAODhandler = " << iAODhandler << ";" << endl;
1907 out << " iESDfilter = " << iESDfilter << ";" << endl;
1908 out << " iJETAN = " << iJETAN << ";" << endl;
1909 out << "// Configuration fot the wagons" << endl;
1910 out << "}" << endl;
1911 ::Info("AnalysisTrainPWG4Jets.C::WriteConfig", "Train configuration wrote to file %s", Form("config_%s.C", kTrainName.Data()));
1912 gSystem->ChangeDirectory(cdir);
1913}
1914
1915//______________________________________________________________________________
1916Bool_t LoadConfig(const char *filename)
1917{
1918// Read train configuration from file
1919 if (gSystem->AccessPathName(filename)) {
1920 ::Error("AnalysisTrainPWG4Jets.C::LoadConfig", "Config file name not found");
1921 return kFALSE;
1922 }
1923 gROOT->ProcessLine(Form(".x %s", filename));
1924 ::Info("AnalysisTrainPWG4Jets.C::LoadConfig", "Train configuration loaded from file %s", filename);
1925 return kTRUE;
1926}
1927
1928Bool_t PatchJDL(){
1929 Printf(">>> Patching JDL");
1930 AliAnalysisManager *mgr = AliAnalysisManager::GetAnalysisManager();
1931 AliAnalysisAlien* gridHandler = (AliAnalysisAlien*)mgr->GetGridHandler();
1932 TGridJDL *jdl = gridHandler->GetGridJDL();
1933 if(iJETAN)jdl->AddToPackages("fastjet","v2.4.0");
1934 gridHandler->WriteJDL(kFALSE);
0971dabc 1935 Printf("<<< Patching JDL");
c38e3b95 1936 return kTRUE;
1937}
1938
1939Bool_t PatchAnalysisMacro(){
4721d8c5 1940 Printf(">>> Patching AnalysisMacro");
1941 gSystem->Exec(Form("mv %s.C %s.C_tmp",kTrainName.Data(),kTrainName.Data()));
c38e3b95 1942
1943 ifstream in1;
1944 in1.open(Form("%s.C_tmp", kTrainName.Data()));
1945 char cLine[250];
1946 TString st;
1947 while(in1.getline(cLine,250)){
1948 st += cLine;
1949 st += "\n";
1950 }
4721d8c5 1951 Int_t index= -1;
c38e3b95 1952 index = st.Index("gSystem->Load(\"libPhysics\");");
1953 index += strlen("gSystem->Load(\"libPhysics\");");
4721d8c5 1954 /*
c38e3b95 1955 TObjArray *arr;
1956 TObjString *objstr;
1957 arr = anaLibs.Tokenize(" ");
1958 TIter next(arr);
4721d8c5 1959
c38e3b95 1960 add += "\n\n // added by CKB \n";
1961 while ((objstr=(TObjString*)next())){
e84da0a5 1962 if(objstr->GetString().Contains("PWG3"))continue;
c38e3b95 1963 if(objstr->GetString().EndsWith(".so"))add += Form("gSystem->Load(\"%s\");\n",objstr->GetString().Data());
1964 }
1965 delete arr;
4721d8c5 1966 */
3878a941 1967 // add += Form("AliLog::SetGlobalLogLevel(%d);\n",AliLog::GetGlobalLogLevel());
4721d8c5 1968 TString add = "";
1969
1970 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1971 add += "\n\n // added by CKB \n";
46534866 1972 if(kErrorIgnoreLevel>0)add += Form("gErrorIgnoreLevel = %d;\n",kErrorIgnoreLevel);
23adcac8 1973 add += "\n gSystem->AddIncludePath(\"./\"); \n";
f4132e7d 1974 add += "\n gSystem->SetFPEMask(); \n";
1975
1976
4721d8c5 1977 if(gGrid&&kPluginAliRootVersion.Length()==0){
1978 add += "\n // Dirty hack for TRD reference data \n";
1979 add += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
1980 add += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
1981 add += "\"); \n";
c38e3b95 1982 }
4721d8c5 1983 add += "// BKC \n\n";
1984 st.Insert(index,add.Data());
e84da0a5 1985
1986 if(kUseDebug){
23adcac8 1987 // st.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
e84da0a5 1988 }
1989
4721d8c5 1990 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
1991 index = st.Index("gSystem->AddIncludePath(\"-I$"); // uncommen $ALICE_ROOT include for par files
1992 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1993 st.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
1994 }
c166d299 1995
46534866 1996 if(AliLog::GetGlobalLogLevel()==AliLog::kFatal){
1997 index = st.Index("AliLog::SetGlobal"); // ncomment setting of log level, do my own
1998 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
1999 st.Insert(index,"AliLog::SetGlobalLogLevel(AliLog::kFatal);// CKB \n // CKB comment out for own setting \n //");
2000 }
2001
c38e3b95 2002 ofstream out;
2003 out.open(Form("%s.C", kTrainName.Data()));
2004 if (out.bad()) {
2005 return kFALSE;
2006 }
2007 out << st << endl;
2008 Printf("<<< Patching AnalysisMacro");
4721d8c5 2009
2010
2011
2012
2013
2014 Printf(">>> Patching Merge Macro");
2015 gSystem->Exec(Form("mv %s_merge.C %s_merge.C_tmp",kTrainName.Data(),kTrainName.Data()));
2016
2017 ifstream in2;
2018 in2.open(Form("%s_merge.C_tmp", kTrainName.Data()));
2019 TString st2;
2020 while(in2.getline(cLine,250)){
2021 st2 += cLine;
2022 st2 += "\n";
2023 }
2024 index = st2.Index("gSystem->Load(\"libPhysics\");");
2025 index += strlen("gSystem->Load(\"libPhysics\");");
2026 TString add2 = "";
23adcac8 2027 add2 += "\n gSystem->AddIncludePath(\"./\"); \n";
4721d8c5 2028 if(gGrid&&kPluginAliRootVersion.Length()==0){
2029 add2 += "\n // Dirty hack for TRD reference data \n";
2030 add2 += "\n gSystem->Setenv(\"ALICE_ROOT\",\"";
2031 add2 += Form("alien://%s/rootfiles/",gGrid->GetHomeDirectory());
2032 add2 += "\"); \n";
2033 }
2034 add2 += "// BKC \n\n";
2035 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2036 st2.Insert(index,add.Data());
2037
2038
2039 if(kUseDebug){
23adcac8 2040 // st2.Insert(index,"\n gROOT->ProcessLine(\".trace\"); // CKB \n");
4721d8c5 2041 }
2042
2043 if(kUseCPAR&&kPluginAliRootVersion.Length()==0){
46534866 2044 index = st2.Index("gSystem->AddIncludePath(\"-I$"); // uncomment $ALICE_ROOT include for par files
4721d8c5 2045 if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2046 st2.Insert(index,"// CKB comment out whehn no aliroot is provided \n //");
2047 }
2048
2049 // do not exclude the extra files from merign, this is done explicitly in this train script
92d850d5 2050 // index = st2.Index("mergeExcludes +="); // uncommen $ALICE_ROOT include for par files
2051 // if(index<0)Printf("%s:%d index out of bounds",(char*)__FILE__,__LINE__);
2052 // st2.Insert(index,"// CKB comment out, handled explicitly by the train macro \n //");
4721d8c5 2053
2054
2055 ofstream out2;
2056 out2.open(Form("%s_merge.C", kTrainName.Data()));
2057 if (out2.bad()) {
2058 return kFALSE;
2059 }
2060 out2 << st2 << endl;
2061 Printf("<<< Patching Merging Macro");
2062
2063
2064
c38e3b95 2065 return kTRUE;
2066
2067}